Rh5BG565500

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0001378
Physical Location & Seq
Forward (+)
89537672 .. 89542758
5087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG565500.1

Sequence Viewer

Length: 1929 bp
ATGGATCAATCTTTCTCCTATCTCCCAAATGGTTATCCATCAACAGCCTATTACTATGGAGGCTATGATGGGACTGGCGACTGGGATGAGTACTCGAGATATGTGAATCCAGAGGGGGTAGATATGACTTCCGGGGTTTATGGAGATAACGGGTCTCTTATGTACCACCATGGTTATGGGTATACACCGTATGGGCCTTATTCACCAGCAGCTTCCCCTGTTCCAACTATGGGAAATGATGGTCAATTATATGGGCCTCAACACTACCAGTATCCGCCCTATTTCCAGCCGCTGACTCCAACCAGTGGGCCATACACTCCCAGTCCTGTAGCCCCTCAGAATGACGTATCCACATCTTTAGCTGCTGACCAAAAGCCTCTGCCTGTGGAAACAGCTAATGGAATCTCTAATGGCATTGCAAATAACGGAAGTGTGAAAGGAAATAACGTTTCAGCTCCCTTATCGACATATCAAACCACATCTTTCAACTCCAATGGTTCATATGGACGAGGTGCTTTACCTGCACGTGTTCCTACTCCTGGGTACCAGGACCCAAGATATGGTTATGACACAGTACGTTCTCCAATTCCTTGGTTAGATGCCCCACTTTTTTCAGATGGGCAGCATAGACCTGTGGCAAATACACCCATTACTTCTTCAAACTCGAATGGCAATAGAATTCCATCTTTGAGGAATCAGAACTACCGTCCAAATTCTCACTTCATGGGTTTGCACCACCCAAGACCACTGTCAGGAATAGGTACAGCTCAAGGGTTTATGAATAGTAGCATGTACCCAAGCAAGTTATTTGGCCAGTATGGAAACACAGTTAGATCCGGTCTGGGATTTGGGTCTCATGGTTATGATTCGCGATCCAATGGACGCACATGGCTGGCTGTTGACAACAAGTATAAACAACCCAGGGGACGTAATGGTGGTTACTATGGATATGGTAATGAGAACTCGGATGGTTTAAATGAACTCAACAGAGGACCTCGGGCGAGAGGCTCAAAGAACCAAAAGAGTTTTCCCCCTAGTGCATTGGCTATCAAGGGACAGAACGTGCCAGCAAATCTTAGTAATGATGAGGAAAAGGATACAAGTTCTGTTCCAGACAGAGAGCAGTACAACAAAGCAGATTTTCCGGAGGATTATACTGATGCCAAATTTTTCATCATCAAGTCATATAGTGAGGATGATGTCCATAAAAGCATCAAGTATAATGTTTGGGCCAGCACACCAAATGGCAACAAGAAACTTCATGCAGCATATCAGGAGGCTCAGGAGAAGACTGGTGGCTGCCCTGTATTTCTTTTTTTCTCGGTCAATACCAGTGGGCAATTTGTGGGTGTCGCTGAGATGTTGGGGCCTGTTGATTTTAACAAGAATTTGGAGTACTGGCAGCAAGACAAATGGAATGGCTGTTTCTCTGTCAAGTGGCACGTTGTTAAAGATGTTCCTAACAGTTTGCTGAAGCATATTACTCTTGAAAATAATGAGAACAAGCCTGTGACTAATAGTAGGGACACTCAAGAGGTTAAGTTGGAACCAGGGCTTAAAATGATAAAAATATTCAAGGAGCATTCAAGCAAAACATGCATTTTGGATGACTTTGGATTTTATGAGTCCCGCCAGAAGACAATTCAGGAGAAGAAGGCTAAGCAACAGCAGCAGTTTCAGAAGCAGGTATGGGAAGGAAAAACCCTCGATGAGAAGAAAGAGGTGGTGACAAATGGGCACGTCAAAACACCAAATTCATCGGATGTTCCCTTTGAGATAACTAAGGAGTCCATCTCAATAGTGCATGCCAGCGAGGAGCTGAAACCTGCAGAAAATGGATCAATTGCAACTGGAGAAGCCCCAAAGGGTGCTAAGCCGGTTGTGGCTGAGAAGAAGGTTGTAGCAAATGGGGTTGCAAACGGTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

642

Amino Acids

70.72

Weight (kDa)

7.64

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 388 - 526 4.1e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 529, 1675, 1834
Acc65I GGTACC 1 cut(s) 543
AccB1I GGYRCC 1 cut(s) 543
AccB7I CCANNNNNTGG 2 cut(s) 305, 560
AccI GTMKAC 1 cut(s) 182
AccII CGCG 1 cut(s) 871
AccIII TCCGGA 1 cut(s) 1144
AciI CCGC 3 cut(s) 275, 290, 1630
AclI AACGTT 1 cut(s) 447
AclWI GGATC 4 cut(s) 12, 828, 867, 1846
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1753
AcuI CTGAAG 1 cut(s) 1493
AcvI CACGTG 1 cut(s) 527
AfaI GTAC 8 cut(s) 92, 164, 545, 576, 763, 794, 1127, 1397
AfiI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
AflIII ACRYGT 1 cut(s) 526
AgsI TTSAA 5 cut(s) 487, 660, 1490, 1576, 1587
AjiI CACGTC 1 cut(s) 1741
AjnI CCWGG 4 cut(s) 538, 546, 920, 1549
AjuI GAANNNNNNNTTGG 2 cut(s) 1011, 1043
AluBI AGCT 6 cut(s) 212, 362, 395, 455, 767, 1819
AluI AGCT 6 cut(s) 212, 362, 395, 455, 767, 1819
Alw26I GTCTC 2 cut(s) 159, 858
AlwI GGATC 4 cut(s) 12, 828, 867, 1846
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 2 cut(s) 94, 996
Aor13HI TCCGGA 1 cut(s) 1144
AoxI GGCC 6 cut(s) 194, 254, 308, 811, 1230, 1367
ApeKI GCWGC 7 cut(s) 209, 362, 622, 1265, 1299, 1402, 1669
ApoI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1753
Asp718I GGTACC 1 cut(s) 543
AspS9I GGNCC 7 cut(s) 194, 254, 308, 550, 992, 1230, 1367
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 2 cut(s) 195, 1738
AvaI CYCGRG 2 cut(s) 94, 996
AvaII GGWCC 2 cut(s) 550, 992
BaeGI GKGCMC 1 cut(s) 1740
BalI TGGCCA 1 cut(s) 813
BanI GGYRCC 1 cut(s) 543
BbrPI CACGTG 1 cut(s) 527
BbsI GAAGAC 2 cut(s) 1295, 1643
BbvI GCAGC 7 cut(s) 221, 349, 634, 1277, 1286, 1414, 1681
BccI CCATC 7 cut(s) 46, 62, 233, 611, 691, 962, 1799
BciT130I CCWGG 4 cut(s) 540, 548, 922, 1551
BciVI GTATCC 3 cut(s) 282, 358, 1090
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 2 cut(s) 159, 858
BfaI CTAG 2 cut(s) 1035, 1927
BfmI CTRYAG 2 cut(s) 327, 1827
BfuAI ACCTGC 3 cut(s) 529, 1675, 1834
BfuI GTATCC 3 cut(s) 282, 358, 1090
BisI GCNGC 8 cut(s) 210, 290, 363, 623, 1266, 1300, 1403, 1670
BlpI GCTNAGC 2 cut(s) 1659, 1872
BlsI GCNGC 8 cut(s) 211, 291, 364, 624, 1267, 1301, 1404, 1671
BmcAI AGTACT 2 cut(s) 92, 1397
Bme1390I CCNGG 5 cut(s) 133, 540, 548, 922, 1551
Bme18I GGWCC 2 cut(s) 550, 992
BmeT110I CYCGRG 2 cut(s) 94, 996
BmgBI CACGTC 1 cut(s) 1741
BmgT120I GGNCC 7 cut(s) 194, 254, 308, 550, 992, 1230, 1367
BmiI GGNNCC 4 cut(s) 545, 552, 1368, 1548
BmrFI CCNGG 5 cut(s) 133, 540, 548, 922, 1551
BmrI ACTGGG 2 cut(s) 91, 315
BmsI GCATC 3 cut(s) 589, 1150, 1221
BmuI ACTGGG 2 cut(s) 91, 315
BoxI GACNNNNGTC 1 cut(s) 748
BpiI GAAGAC 2 cut(s) 1295, 1643
BplI GAGNNNNNCTC 2 cut(s) 1778, 1810
BpmI CTGGAG 1 cut(s) 1872
Bpu10I CCTNAGC 1 cut(s) 1281
Bpu1102I GCTNAGC 2 cut(s) 1659, 1872
BpuEI CTTGAG 2 cut(s) 753, 1515
BpuMI CCSGG 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 527
BsaI GGTCTC 2 cut(s) 159, 858
BsaJI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BsaWI WCCGGW 2 cut(s) 836, 1144
Bsc4I CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
Bse118I RCCGGY 1 cut(s) 1876
Bse3DI GCAATG 1 cut(s) 414
BseAI TCCGGA 1 cut(s) 1144
BseBI CCWGG 4 cut(s) 540, 548, 922, 1551
BseDI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BseGI GGATG 5 cut(s) 91, 973, 1201, 1612, 1768
BseLI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 4 cut(s) 350, 1295, 1347, 1878
BseRI GAGGAG 1 cut(s) 1829
BseSI GKGCMC 1 cut(s) 1740
BseXI GCAGC 7 cut(s) 221, 349, 634, 1277, 1286, 1414, 1681
BsgI GTGCAG 1 cut(s) 507
Bsh1236I CGCG 1 cut(s) 871
BshFI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BshNI GGYRCC 1 cut(s) 543
BsiHKCI CYCGRG 2 cut(s) 94, 996
BsiSI CCGG 4 cut(s) 132, 837, 1145, 1877
BslFI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
BslI CCNNNNNNNGG 5 cut(s) 230, 305, 539, 560, 752
BsmAI GTCTC 2 cut(s) 159, 858
BsmFI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
BsmI GAATGC 1 cut(s) 1582
BsnI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
Bso31I GGTCTC 2 cut(s) 159, 858
BsoBI CYCGRG 2 cut(s) 94, 996
Bsp1286I GDGCHC 1 cut(s) 1740
Bsp13I TCCGGA 1 cut(s) 1144
Bsp143I GATC 4 cut(s) 4, 833, 872, 1838
Bsp1720I GCTNAGC 2 cut(s) 1659, 1872
Bsp19I CCATGG 1 cut(s) 169
Bsp68I TCGCGA 1 cut(s) 871
BspACI CCGC 3 cut(s) 275, 290, 1630
BspANI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BspCNI CTCAG 4 cut(s) 349, 1294, 1348, 1879
BspEI TCCGGA 1 cut(s) 1144
BspFNI CGCG 1 cut(s) 871
BspLI GGNNCC 4 cut(s) 545, 552, 1368, 1548
BspMAI CTGCAG 1 cut(s) 1831
BspMI ACCTGC 3 cut(s) 529, 1675, 1834
BspPI GGATC 4 cut(s) 12, 828, 867, 1846
BspT107I GGYRCC 1 cut(s) 543
BspTNI GGTCTC 2 cut(s) 159, 858
BsrDI GCAATG 1 cut(s) 414
BsrFI RCCGGY 1 cut(s) 1876
BssAI RCCGGY 1 cut(s) 1876
BssECI CCNNGG 8 cut(s) 132, 169, 539, 590, 920, 921, 995, 1550
BssMI GATC 4 cut(s) 4, 833, 872, 1838
BssNAI GTATAC 1 cut(s) 183
BssT1I CCWWGG 2 cut(s) 169, 590
Bst1107I GTATAC 1 cut(s) 183
Bst2UI CCWGG 4 cut(s) 540, 548, 922, 1551
Bst4CI ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1922
BstAPI GCANNNNNTGC 1 cut(s) 1596
BstBAI YACGTR 1 cut(s) 527
BstC8I GCNNGC 5 cut(s) 894, 1068, 1234, 1806, 1810
BstDEI CTNAG 8 cut(s) 336, 1076, 1281, 1356, 1659, 1782, 1872, 1887
BstDSI CCRYGG 1 cut(s) 169
BstF5I GGATG 5 cut(s) 91, 973, 1201, 1612, 1768
BstFNI CGCG 1 cut(s) 871
BstKTI GATC 4 cut(s) 7, 836, 875, 1841
BstMAI GTCTC 2 cut(s) 159, 858
BstMBI GATC 4 cut(s) 4, 833, 872, 1838
BstMWI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
BstNI CCWGG 4 cut(s) 540, 548, 922, 1551
BstNSI RCATGY 3 cut(s) 793, 1599, 1808
BstPAI GACNNNNGTC 1 cut(s) 748
BstSCI CCNGG 5 cut(s) 131, 538, 546, 920, 1549
BstSFI CTRYAG 2 cut(s) 327, 1827
BstSLI GKGCMC 1 cut(s) 1740
BstUI CGCG 1 cut(s) 871
BstV1I GCAGC 7 cut(s) 221, 349, 634, 1277, 1286, 1414, 1681
BstV2I GAAGAC 2 cut(s) 1295, 1643
BstX2I RGATCY 1 cut(s) 833
BstXI CCANNNNNNTGG 2 cut(s) 176, 591
BstYI RGATCY 1 cut(s) 833
BstZ17I GTATAC 1 cut(s) 183
BsuI GTATCC 3 cut(s) 282, 358, 1090
BsuRI GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
BtgI CCRYGG 1 cut(s) 169
BtrI CACGTC 1 cut(s) 1741
BtsCI GGATG 5 cut(s) 91, 973, 1201, 1612, 1768
BtsIMutI CAGTG 3 cut(s) 310, 746, 1339
BtuMI TCGCGA 1 cut(s) 871
BveI ACCTGC 3 cut(s) 529, 1675, 1834
Cac8I GCNNGC 5 cut(s) 894, 1068, 1234, 1806, 1810
CaiI CAGNNNCTG 1 cut(s) 292
Cfr10I RCCGGY 1 cut(s) 1876
Cfr13I GGNCC 7 cut(s) 194, 254, 308, 550, 992, 1230, 1367
CseI GACGC 1 cut(s) 891
Csp6I GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
CspCI CAANNNNNGTGG 2 cut(s) 1315, 1350
CviAII CATG 8 cut(s) 170, 724, 790, 857, 888, 1262, 1596, 1805
CviQI GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
DdeI CTNAG 8 cut(s) 336, 1076, 1281, 1356, 1659, 1782, 1872, 1887
DpnI GATC 4 cut(s) 6, 835, 874, 1840
DpnII GATC 4 cut(s) 4, 833, 872, 1838
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 811
EciI GGCGGA 1 cut(s) 264
Eco130I CCWWGG 2 cut(s) 169, 590
Eco31I GGTCTC 2 cut(s) 159, 858
Eco47I GGWCC 2 cut(s) 550, 992
Eco57I CTGAAG 1 cut(s) 1493
Eco72I CACGTG 1 cut(s) 527
Eco88I CYCGRG 2 cut(s) 94, 996
EcoO109I RGGNCCY 3 cut(s) 550, 992, 1367
EcoRI GAATTC 1 cut(s) 678
EcoRII CCWGG 4 cut(s) 538, 546, 920, 1549
EcoT14I CCWWGG 2 cut(s) 169, 590
EcoT22I ATGCAT 1 cut(s) 1601
ErhI CCWWGG 2 cut(s) 169, 590
FaeI CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1808
FaqI GGGAC 5 cut(s) 85, 939, 1068, 1538, 1612
FatI CATG 8 cut(s) 169, 723, 789, 856, 887, 1261, 1595, 1804
FauI CCCGC 1 cut(s) 1637
FauNDI CATATG 1 cut(s) 502
FblI GTMKAC 1 cut(s) 182
Fnu4HI GCNGC 8 cut(s) 210, 290, 363, 623, 1266, 1300, 1403, 1670
FokI GGATG 5 cut(s) 98, 980, 1208, 1619, 1775
Fsp4HI GCNGC 8 cut(s) 210, 290, 363, 623, 1266, 1300, 1403, 1670
FspBI CTAG 2 cut(s) 1035, 1927
GluI GCNGC 8 cut(s) 210, 290, 363, 623, 1266, 1300, 1403, 1670
GsuI CTGGAG 1 cut(s) 1872
HaeIII GGCC 6 cut(s) 196, 256, 310, 813, 1232, 1369
HapII CCGG 4 cut(s) 132, 837, 1145, 1877
HgaI GACGC 1 cut(s) 891
Hin1II CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1808
HincII GTYRAC 1 cut(s) 901
HindII GTYRAC 1 cut(s) 901
HinfI GANTC 7 cut(s) 106, 295, 402, 694, 866, 1625, 1787
HpaII CCGG 4 cut(s) 132, 837, 1145, 1877
HphI GGTGA 2 cut(s) 195, 1738
Hpy166II GTNNAC 2 cut(s) 183, 901
Hpy188I TCNGA 6 cut(s) 339, 616, 699, 967, 1680, 1762
Hpy8I GTNNAC 2 cut(s) 183, 901
HpyAV CCTTC 3 cut(s) 1648, 1688, 1888
HpyCH4III ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1922
HpyCH4IV ACGT 8 cut(s) 345, 447, 526, 577, 928, 1062, 1443, 1740
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
HpyF3I CTNAG 8 cut(s) 336, 1076, 1281, 1356, 1659, 1782, 1872, 1887
HpySE526I ACGT 8 cut(s) 345, 447, 526, 577, 928, 1062, 1443, 1740
Hsp92II CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1808
Kpn2I TCCGGA 1 cut(s) 1144
KpnI GGTACC 1 cut(s) 547
Kzo9I GATC 4 cut(s) 4, 833, 872, 1838
LmnI GCTCC 3 cut(s) 460, 1579, 1816
Lsp1109I GCAGC 7 cut(s) 221, 349, 634, 1277, 1286, 1414, 1681
LweI GCATC 3 cut(s) 589, 1150, 1221
MaeI CTAG 2 cut(s) 1035, 1927
MaeII ACGT 8 cut(s) 345, 447, 526, 577, 928, 1062, 1443, 1740
MaeIII GTNAC 3 cut(s) 938, 1510, 1726
MalI GATC 4 cut(s) 6, 835, 874, 1840
MboI GATC 4 cut(s) 4, 833, 872, 1838
MboII GAAGA 6 cut(s) 648, 1300, 1648, 1663, 1726, 1903
MfeI CAATTG 1 cut(s) 1842
MflI RGATCY 1 cut(s) 833
MhlI GDGCHC 1 cut(s) 1740
MlsI TGGCCA 1 cut(s) 813
MluNI TGGCCA 1 cut(s) 813
MlyI GAGTC 3 cut(s) 289, 1634, 1796
MmeI TCCRAC 3 cut(s) 248, 323, 1524
Mox20I TGGCCA 1 cut(s) 813
Mph1103I ATGCAT 1 cut(s) 1601
MroI TCCGGA 1 cut(s) 1144
MscI TGGCCA 1 cut(s) 813
MseI TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
MslI CAYNNNNRTG 2 cut(s) 174, 861
Msp20I TGGCCA 1 cut(s) 813
MspA1I CMGCKG 1 cut(s) 292
MspI CCGG 4 cut(s) 132, 837, 1145, 1877
MspR9I CCNGG 5 cut(s) 133, 540, 548, 922, 1551
MunI CAATTG 1 cut(s) 1842
Mva1269I GAATGC 1 cut(s) 1582
MvaI CCWGG 4 cut(s) 540, 548, 922, 1551
MvnI CGCG 1 cut(s) 871
MwoI GCNNNNNNNGC 3 cut(s) 521, 1596, 1669
NciI CCSGG 1 cut(s) 133
NcoI CCATGG 1 cut(s) 169
NdeI CATATG 1 cut(s) 502
NdeII GATC 4 cut(s) 4, 833, 872, 1838
NlaIII CATG 8 cut(s) 173, 727, 793, 860, 891, 1265, 1599, 1808
NlaIV GGNNCC 4 cut(s) 545, 552, 1368, 1548
NmuCI GTSAC 2 cut(s) 1510, 1726
NruI TCGCGA 1 cut(s) 871
NsiI ATGCAT 1 cut(s) 1601
NspI RCATGY 3 cut(s) 793, 1599, 1808
PaeI GCATGC 1 cut(s) 1808
PaeR7I CTCGAG 1 cut(s) 94
PasI CCCWGGG 1 cut(s) 921
PctI GAATGC 1 cut(s) 1582
PfeI GAWTC 4 cut(s) 106, 402, 694, 866
PflMI CCANNNNNTGG 2 cut(s) 305, 560
PkrI GCNGC 8 cut(s) 211, 291, 364, 624, 1267, 1301, 1404, 1671
PleI GAGTC 3 cut(s) 289, 1633, 1795
PmaCI CACGTG 1 cut(s) 527
PmlI CACGTG 1 cut(s) 527
PpsI GAGTC 3 cut(s) 289, 1633, 1795
Ppu21I YACGTR 1 cut(s) 527
PpuMI RGGWCCY 2 cut(s) 550, 992
PshAI GACNNNNGTC 1 cut(s) 748
Psp1406I AACGTT 1 cut(s) 447
Psp5II RGGWCCY 2 cut(s) 550, 992
Psp6I CCWGG 4 cut(s) 538, 546, 920, 1549
PspCI CACGTG 1 cut(s) 527
PspGI CCWGG 4 cut(s) 538, 546, 920, 1549
PspN4I GGNNCC 4 cut(s) 545, 552, 1368, 1548
PspPI GGNCC 7 cut(s) 194, 254, 308, 550, 992, 1230, 1367
PspPPI RGGWCCY 2 cut(s) 550, 992
PstI CTGCAG 1 cut(s) 1831
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 1 cut(s) 833
RruI TCGCGA 1 cut(s) 871
RsaI GTAC 8 cut(s) 92, 164, 545, 576, 763, 794, 1127, 1397
RsaNI GTAC 8 cut(s) 91, 163, 544, 575, 762, 793, 1126, 1396
RseI CAYNNNNRTG 2 cut(s) 174, 861
SaqAI TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
SatI GCNGC 8 cut(s) 210, 290, 363, 623, 1266, 1300, 1403, 1670
Sau3AI GATC 4 cut(s) 4, 833, 872, 1838
Sau96I GGNCC 7 cut(s) 194, 254, 308, 550, 992, 1230, 1367
ScaI AGTACT 2 cut(s) 92, 1397
SchI GAGTC 3 cut(s) 289, 1634, 1796
ScrFI CCNGG 5 cut(s) 133, 540, 548, 922, 1551
SduI GDGCHC 1 cut(s) 1740
SfaNI GCATC 3 cut(s) 589, 1150, 1221
SfcI CTRYAG 2 cut(s) 327, 1827
Sfr274I CTCGAG 1 cut(s) 94
SinI GGWCC 2 cut(s) 550, 992
SlaI CTCGAG 1 cut(s) 94
SmiMI CAYNNNNRTG 2 cut(s) 174, 861
SmlI CTYRAG 3 cut(s) 94, 768, 1530
SmoI CTYRAG 3 cut(s) 94, 768, 1530
SphI GCATGC 1 cut(s) 1808
SsiI CCGC 3 cut(s) 275, 290, 1630
SspI AATATT 1 cut(s) 1572
SspMI CTAG 2 cut(s) 1035, 1927
StyD4I CCNGG 5 cut(s) 131, 538, 546, 920, 1549
StyI CCWWGG 2 cut(s) 169, 590
TaaI ACNGT 7 cut(s) 189, 574, 707, 750, 829, 1466, 1922
TaiI ACGT 8 cut(s) 348, 450, 529, 580, 931, 1065, 1446, 1743
TaqI TCGA 4 cut(s) 95, 464, 665, 1707
TaqII GACCGA 1 cut(s) 1312
TatI WGTACW 3 cut(s) 90, 1125, 1395
TauI GCSGC 1 cut(s) 292
TfiI GAWTC 4 cut(s) 106, 402, 694, 866
Tru1I TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
Tru9I TTAA 5 cut(s) 974, 1380, 1449, 1539, 1557
TscAI CASTG 3 cut(s) 310, 753, 1339
TseFI GTSAC 2 cut(s) 1510, 1726
TseI GCWGC 7 cut(s) 209, 362, 622, 1265, 1299, 1402, 1669
Tsp45I GTSAC 2 cut(s) 1510, 1726
TspDTI ATGAA 7 cut(s) 489, 712, 794, 993, 1162, 1250, 1746
TspGWI ACGGA 1 cut(s) 441
TspRI CASTG 3 cut(s) 310, 753, 1339
Van91I CCANNNNNTGG 2 cut(s) 305, 560
VpaK11BI GGWCC 2 cut(s) 550, 992
XapI RAATTY 5 cut(s) 678, 712, 1166, 1387, 1753
XceI RCATGY 3 cut(s) 793, 1599, 1808
XcmI CCANNNNNNNNNTGG 1 cut(s) 173
XhoI CTCGAG 1 cut(s) 94
XmiI GTMKAC 1 cut(s) 182
XspI CTAG 2 cut(s) 1035, 1927
ZrmI AGTACT 2 cut(s) 92, 1397
Zsp2I ATGCAT 1 cut(s) 1601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.