RLG00000037065

YTH domain family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001378
Physical Location & Seq
Forward (+)
88034946 .. 88038809
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000037065

Sequence Viewer

Length: 2130 bp
ATGGCCACCGTTGCTCCTCCTGCAGATCAAGCAGCAGATTTGCTTCAGAAGTTGTCATTAGATTCTCAGACCAAGACCCTGGAAATTCCAGAGCCTACAAAGAAGCCTTCTGTTAACCAATATGGGTCTATTGATTCTGGCAACGCTGCAAATGGTCAGATCCAATCTGATCGCTCCGTGACTCCACTGTCGACTGATTTCATGGATCAATCTTTCTCCTATCTCCCAAATGGTTATCCATCAACAGCCTATTACTATGGAGGCTATGATGGGACTGGCGACTGGGATGAGTACTCGAGATATGTGAATCCAGAGGGAGTAGATATGACTTCCGGGGTTTATGGAGATAACGGGTCTCTTATGTACCACCATGGTTACGGGTATGCACCGTATGGGCCTTATTCACCAGCAGCTTCCCCTGTTCCAACTATGGGAAATGATGGTCAATTATATGGGCCTCAACACTACCAGTATCCGCCCTATTTCCAGCCACTGACTCCAACCAGTGGGCCATACACTCCCAGCCCTGTAGCCCCTCAGAGTGAGGTATCCACATCTTTAGCTGCTGACCAAAAACCTCTGCCTGTGGAAACAGCTAATGGAATTTCTAATGGCATTGCAAATAACGGAAGTGTGAAAGGAAATAACGTTTCAGCTCCCTTATCGACATATCAAACCACATCTTTCAACTCCAATGGTTCATATGGACGAGGTGCTTTACCTGCACGTGTTCCTACTCCTGGGTACCAGGACCCAAGATATGGTTATGACACAGTACGTTCTCCAATTCCTTGGTTAGATGCCCCACTTTTTTCAGATGGGCAGCATAGACCTGTGGCAAATACACCCATTACTTCTTCAAACTCGAATGGCAATAGAATTCCATCTTTGAGGAATCAGAACTACCGTCCAAATTCTCACTTCATGGGTTTGCACCACCCGAGACCGCTGTCAGGAATAGGTACAGCTCAGGGGTTTATGAATAGCAGCATGTACCCAAGCAAGCTATTTGGCCAGTATGGAAACACAGTTAGATCCGGTCTGGGATTTGGGTCTCATGGTTATGATTCACGAACCAATGGACGCACATGGCTGGCTGTTGACAACAAGTATAAACAACCCAGGGGACGTAATGGTGGTTACTATGGATATGGTAATGAGAACTCGGATGGTTTAAATGAACTCAACAGAGGACCTCGGGCGAGAGGCTCAAAGAACCAAAAGAGTTCTGCCCCTAGTGCGTTGGCTATCAAGGGACAGAACGTGCCAGCAAATCTTAGTAATGATGAGGAAAAGGATACAAGTTCTGTTCCAGACAGAGAGCAATACAACAAAGCAGATTTTCCGGAGGATTATACCGATGCCAAATTTTTCATCATCAAGTCATATAGTGAGGATGATGTCCATAAGAGCATCAAGTATAATGTTTGGGCCAGCACACCAAATGGCAACAAGAAGCTTCATGCAGCGTATCAGGAGGCTCAGGAGAAGACTGGTGGCTGCCCTGTATTTCTTTTTTTCTCGGTCAATACCAGTGGGCAATTTGTCGGTGTCGCTGAGATGTTGGGGCCTGTTGATTTTAACAAGAATTTGGAGTACTGGCAGCAAGACAAATGGAATGGCTGTTTCTCTGTCAAGTGGCATATTGTTAAAGACGTTCCTAACAGTTTGCTGAAGCATATTACTCTTGAAAATAATGAGAACAAGCCTGTGACTAATAGTAGGGACACTCAAGAGGTTAAGTTGGAACCAGGGCTTAAAATGATCAAAATATTCAAGGAGCATTCAAGCAAAACATGCATTTTGGATGACTTTGGATTTTATGAGTCCCGCCAGAAGACAATTCAGGAGAAGAAGGCTAAGCAACAGCAGCAGTTTCAGAAGCAGGTATGGGAAGGAAAAACCCTCGATGAGAAGAAAGAGGTGGTGACAAACGGGCAAGTCAAAACACAAAATTCATTGGATGTTCCCTCTGAGATAACTAAGGAGTCTATCTCAATAGTGCATGCCAGTGAGGAGCTGAAACCTGCAGAAAATGGATCAATTGCAACTGGAGATGCCCCAAAGGGTGCTAAGCCGGTTGTGGCTGAGAAGAGGGTTGTAGCAAATGGGGTTGCAAACGGTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

710

Amino Acids

77.66

Weight (kDa)

6.72

Isoelectric Point (pI)

33.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 455 - 593 4.2e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 187
Acc36I ACCTGC 3 cut(s) 730, 1876, 2035
Acc65I GGTACC 1 cut(s) 744
AccB1I GGYRCC 1 cut(s) 744
AccB7I CCANNNNNTGG 2 cut(s) 506, 761
AccI GTMKAC 1 cut(s) 191
AccIII TCCGGA 1 cut(s) 1345
AciI CCGC 3 cut(s) 476, 947, 1831
AclI AACGTT 1 cut(s) 648
AclWI GGATC 4 cut(s) 154, 213, 1029, 2047
AcoI YGGCCR 2 cut(s) 3, 1012
AcsI RAATTY 7 cut(s) 84, 603, 879, 913, 1367, 1588, 1954
AcuI CTGAAG 2 cut(s) 29, 1694
AcvI CACGTG 1 cut(s) 728
AfaI GTAC 7 cut(s) 293, 365, 746, 777, 964, 995, 1598
AfiI CCNNNNNNNGG 5 cut(s) 431, 506, 740, 761, 953
AflIII ACRYGT 1 cut(s) 727
AgsI TTSAA 5 cut(s) 688, 861, 1691, 1777, 1788
AjnI CCWGG 5 cut(s) 78, 739, 747, 1121, 1750
AluBI AGCT 8 cut(s) 413, 563, 596, 656, 968, 1006, 1459, 2020
AluI AGCT 8 cut(s) 413, 563, 596, 656, 968, 1006, 1459, 2020
Alw26I GTCTC 3 cut(s) 360, 937, 1059
AlwI GGATC 4 cut(s) 154, 213, 1029, 2047
AlwNI CAGNNNCTG 1 cut(s) 493
Ama87I CYCGRG 3 cut(s) 295, 940, 1197
Aor13HI TCCGGA 1 cut(s) 1345
AoxI GGCC 7 cut(s) 3, 395, 455, 509, 1012, 1431, 1568
ApoI RAATTY 7 cut(s) 84, 603, 879, 913, 1367, 1588, 1954
Asp718I GGTACC 1 cut(s) 744
AspS9I GGNCC 7 cut(s) 395, 455, 509, 751, 1193, 1431, 1568
AsuC2I CCSGG 1 cut(s) 334
AsuHPI GGTGA 2 cut(s) 396, 1939
AvaI CYCGRG 3 cut(s) 295, 940, 1197
AvaII GGWCC 2 cut(s) 751, 1193
BalI TGGCCA 2 cut(s) 5, 1014
BanI GGYRCC 1 cut(s) 744
BbrPI CACGTG 1 cut(s) 728
BbsI GAAGAC 2 cut(s) 1496, 1844
BccI CCATC 6 cut(s) 247, 263, 434, 812, 892, 1163
BciT130I CCWGG 5 cut(s) 80, 741, 749, 1123, 1752
BciVI GTATCC 3 cut(s) 483, 559, 1291
BclI TGATCA 1 cut(s) 1764
BcnI CCSGG 1 cut(s) 334
BcoDI GTCTC 3 cut(s) 360, 937, 1059
BfaI CTAG 2 cut(s) 1236, 2128
BfmI CTRYAG 3 cut(s) 21, 528, 2028
BfuAI ACCTGC 3 cut(s) 730, 1876, 2035
BfuI GTATCC 3 cut(s) 483, 559, 1291
BlpI GCTNAGC 2 cut(s) 1860, 2073
BmcAI AGTACT 2 cut(s) 293, 1598
Bme1390I CCNGG 6 cut(s) 80, 334, 741, 749, 1123, 1752
Bme18I GGWCC 2 cut(s) 751, 1193
BmeT110I CYCGRG 3 cut(s) 295, 940, 1197
BmgT120I GGNCC 7 cut(s) 395, 455, 509, 751, 1193, 1431, 1568
BmiI GGNNCC 4 cut(s) 746, 753, 1569, 1749
BmrFI CCNGG 6 cut(s) 80, 334, 741, 749, 1123, 1752
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 4 cut(s) 790, 1351, 1422, 2047
BmuI ACTGGG 1 cut(s) 292
BoxI GACNNNNGTC 1 cut(s) 949
BpiI GAAGAC 2 cut(s) 1496, 1844
BplI GAGNNNNNCTC 2 cut(s) 1979, 2011
BpmI CTGGAG 1 cut(s) 2073
Bpu10I CCTNAGC 2 cut(s) 969, 1482
Bpu1102I GCTNAGC 2 cut(s) 1860, 2073
BpuEI CTTGAG 1 cut(s) 1716
BpuMI CCSGG 1 cut(s) 334
BsaAI YACGTR 1 cut(s) 728
BsaI GGTCTC 3 cut(s) 360, 937, 1059
BsaJI CCNNGG 9 cut(s) 78, 333, 370, 740, 791, 1121, 1122, 1196, 1751
BsaWI WCCGGW 2 cut(s) 1037, 1345
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bsc4I CCNNNNNNNGG 5 cut(s) 431, 506, 740, 761, 953
Bse118I RCCGGY 1 cut(s) 2077
Bse3DI GCAATG 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 1345
BseBI CCWGG 5 cut(s) 80, 741, 749, 1123, 1752
BseDI CCNNGG 9 cut(s) 78, 333, 370, 740, 791, 1121, 1122, 1196, 1751
BseGI GGATG 5 cut(s) 292, 1174, 1402, 1813, 1969
BseLI CCNNNNNNNGG 5 cut(s) 431, 506, 740, 761, 953
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 7 cut(s) 80, 551, 983, 1496, 1548, 1965, 2079
BseRI GAGGAG 2 cut(s) 6, 2030
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 1 cut(s) 708
BshFI GGCC 7 cut(s) 5, 397, 457, 511, 1014, 1433, 1570
BshNI GGYRCC 1 cut(s) 744
BsiHKCI CYCGRG 3 cut(s) 295, 940, 1197
BsiSI CCGG 4 cut(s) 333, 1038, 1346, 2078
BslFI GGGAC 5 cut(s) 286, 1140, 1269, 1739, 1813
BslI CCNNNNNNNGG 5 cut(s) 431, 506, 740, 761, 953
BsmAI GTCTC 3 cut(s) 360, 937, 1059
BsmFI GGGAC 5 cut(s) 286, 1140, 1269, 1739, 1813
BsmI GAATGC 1 cut(s) 1783
BsnI GGCC 7 cut(s) 5, 397, 457, 511, 1014, 1433, 1570
Bso31I GGTCTC 3 cut(s) 360, 937, 1059
BsoBI CYCGRG 3 cut(s) 295, 940, 1197
Bsp13I TCCGGA 1 cut(s) 1345
Bsp143I GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
Bsp1720I GCTNAGC 2 cut(s) 1860, 2073
Bsp19I CCATGG 1 cut(s) 370
BspACI CCGC 3 cut(s) 476, 947, 1831
BspANI GGCC 7 cut(s) 5, 397, 457, 511, 1014, 1433, 1570
BspCNI CTCAG 7 cut(s) 79, 550, 982, 1495, 1549, 1966, 2080
BspEI TCCGGA 1 cut(s) 1345
BspLI GGNNCC 4 cut(s) 746, 753, 1569, 1749
BspMAI CTGCAG 2 cut(s) 25, 2032
BspMI ACCTGC 3 cut(s) 730, 1876, 2035
BspPI GGATC 4 cut(s) 154, 213, 1029, 2047
BspT107I GGYRCC 1 cut(s) 744
BspTNI GGTCTC 3 cut(s) 360, 937, 1059
BsrDI GCAATG 1 cut(s) 615
BsrFI RCCGGY 1 cut(s) 2077
BssAI RCCGGY 1 cut(s) 2077
BssECI CCNNGG 9 cut(s) 78, 333, 370, 740, 791, 1121, 1122, 1196, 1751
BssMI GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
BssT1I CCWWGG 2 cut(s) 370, 791
Bst2UI CCWGG 5 cut(s) 80, 741, 749, 1123, 1752
Bst4CI ACNGT 8 cut(s) 10, 189, 390, 775, 908, 1030, 1667, 2123
Bst6I CTCTTC 1 cut(s) 2087
BstAPI GCANNNNNTGC 1 cut(s) 1797
BstBAI YACGTR 1 cut(s) 728
BstC8I GCNNGC 5 cut(s) 1004, 1095, 1269, 1435, 2007
BstDSI CCRYGG 1 cut(s) 370
BstF5I GGATG 5 cut(s) 292, 1174, 1402, 1813, 1969
BstKTI GATC 7 cut(s) 28, 162, 172, 208, 1037, 1767, 2042
BstMAI GTCTC 3 cut(s) 360, 937, 1059
BstMBI GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
BstMWI GCNNNNNNNGC 7 cut(s) 11, 20, 29, 722, 1238, 1797, 1870
BstNI CCWGG 5 cut(s) 80, 741, 749, 1123, 1752
BstNSI RCATGY 3 cut(s) 994, 1800, 2009
BstPAI GACNNNNGTC 1 cut(s) 949
BstSCI CCNGG 6 cut(s) 78, 332, 739, 747, 1121, 1750
BstSFI CTRYAG 3 cut(s) 21, 528, 2028
BstV2I GAAGAC 2 cut(s) 1496, 1844
BstX2I RGATCY 2 cut(s) 159, 1034
BstXI CCANNNNNNTGG 2 cut(s) 79, 792
BstYI RGATCY 2 cut(s) 159, 1034
BsuI GTATCC 3 cut(s) 483, 559, 1291
BsuRI GGCC 7 cut(s) 5, 397, 457, 511, 1014, 1433, 1570
BtgI CCRYGG 1 cut(s) 370
BtsCI GGATG 5 cut(s) 292, 1174, 1402, 1813, 1969
BtsIMutI CAGTG 5 cut(s) 185, 491, 511, 1540, 2017
BveI ACCTGC 3 cut(s) 730, 1876, 2035
Cac8I GCNNGC 5 cut(s) 1004, 1095, 1269, 1435, 2007
CaiI CAGNNNCTG 1 cut(s) 493
Cfr10I RCCGGY 1 cut(s) 2077
Cfr13I GGNCC 7 cut(s) 395, 455, 509, 751, 1193, 1431, 1568
CseI GACGC 1 cut(s) 1092
Csp6I GTAC 7 cut(s) 292, 364, 745, 776, 963, 994, 1597
CspCI CAANNNNNGTGG 2 cut(s) 1516, 1551
CviAII CATG 9 cut(s) 202, 371, 925, 991, 1058, 1089, 1463, 1797, 2006
CviQI GTAC 7 cut(s) 292, 364, 745, 776, 963, 994, 1597
DpnI GATC 7 cut(s) 27, 161, 171, 207, 1036, 1766, 2041
DpnII GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
DraI TTTAAA 1 cut(s) 1176
DrdI GACNNNNNNGTC 1 cut(s) 187
DseDI GACNNNNNNGTC 1 cut(s) 187
EaeI YGGCCR 2 cut(s) 3, 1012
Eam1104I CTCTTC 1 cut(s) 2087
EarI CTCTTC 1 cut(s) 2087
EciI GGCGGA 1 cut(s) 465
Eco130I CCWWGG 2 cut(s) 370, 791
Eco31I GGTCTC 3 cut(s) 360, 937, 1059
Eco47I GGWCC 2 cut(s) 751, 1193
Eco57I CTGAAG 2 cut(s) 29, 1694
Eco72I CACGTG 1 cut(s) 728
Eco88I CYCGRG 3 cut(s) 295, 940, 1197
EcoO109I RGGNCCY 3 cut(s) 751, 1193, 1568
EcoRI GAATTC 1 cut(s) 879
EcoRII CCWGG 5 cut(s) 78, 739, 747, 1121, 1750
EcoT14I CCWWGG 2 cut(s) 370, 791
EcoT22I ATGCAT 1 cut(s) 1802
ErhI CCWWGG 2 cut(s) 370, 791
FaeI CATG 9 cut(s) 205, 374, 928, 994, 1061, 1092, 1466, 1800, 2009
FaqI GGGAC 5 cut(s) 286, 1140, 1269, 1739, 1813
FatI CATG 9 cut(s) 201, 370, 924, 990, 1057, 1088, 1462, 1796, 2005
FauI CCCGC 1 cut(s) 1838
FauNDI CATATG 1 cut(s) 703
FbaI TGATCA 1 cut(s) 1764
FblI GTMKAC 1 cut(s) 191
FokI GGATG 5 cut(s) 299, 1181, 1409, 1820, 1976
FspBI CTAG 2 cut(s) 1236, 2128
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 2073
HaeIII GGCC 7 cut(s) 5, 397, 457, 511, 1014, 1433, 1570
HapII CCGG 4 cut(s) 333, 1038, 1346, 2078
HgaI GACGC 1 cut(s) 1092
Hin1II CATG 9 cut(s) 205, 374, 928, 994, 1061, 1092, 1466, 1800, 2009
HincII GTYRAC 3 cut(s) 115, 192, 1102
HindII GTYRAC 3 cut(s) 115, 192, 1102
HindIII AAGCTT 1 cut(s) 1457
HinfI GANTC 9 cut(s) 62, 134, 181, 307, 496, 895, 1067, 1826, 1988
HpaI GTTAAC 1 cut(s) 115
HpaII CCGG 4 cut(s) 333, 1038, 1346, 2078
HphI GGTGA 2 cut(s) 396, 1939
Hpy166II GTNNAC 3 cut(s) 115, 192, 1102
Hpy8I GTNNAC 3 cut(s) 115, 192, 1102
HpyAV CCTTC 3 cut(s) 117, 1849, 1889
HpyCH4III ACNGT 8 cut(s) 10, 189, 390, 775, 908, 1030, 1667, 2123
HpyCH4IV ACGT 6 cut(s) 648, 727, 778, 1129, 1263, 1656
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 20, 29, 722, 1238, 1797, 1870
HpySE526I ACGT 6 cut(s) 648, 727, 778, 1129, 1263, 1656
Hsp92II CATG 9 cut(s) 205, 374, 928, 994, 1061, 1092, 1466, 1800, 2009
Kpn2I TCCGGA 1 cut(s) 1345
KpnI GGTACC 1 cut(s) 748
Ksp22I TGATCA 1 cut(s) 1764
KspAI GTTAAC 1 cut(s) 115
Kzo9I GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
LmnI GCTCC 5 cut(s) 19, 179, 661, 1780, 2017
LweI GCATC 4 cut(s) 790, 1351, 1422, 2047
MaeI CTAG 2 cut(s) 1236, 2128
MaeII ACGT 6 cut(s) 648, 727, 778, 1129, 1263, 1656
MaeIII GTNAC 5 cut(s) 178, 374, 1139, 1711, 1927
MalI GATC 7 cut(s) 27, 161, 171, 207, 1036, 1766, 2041
MboI GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
MboII GAAGA 6 cut(s) 849, 1501, 1849, 1864, 1927, 2104
MfeI CAATTG 1 cut(s) 2043
MflI RGATCY 2 cut(s) 159, 1034
MlsI TGGCCA 2 cut(s) 5, 1014
MluNI TGGCCA 2 cut(s) 5, 1014
MlyI GAGTC 4 cut(s) 175, 490, 1835, 1997
MmeI TCCRAC 3 cut(s) 449, 524, 1725
Mox20I TGGCCA 2 cut(s) 5, 1014
Mph1103I ATGCAT 1 cut(s) 1802
MroI TCCGGA 1 cut(s) 1345
MscI TGGCCA 2 cut(s) 5, 1014
MseI TTAA 6 cut(s) 114, 1175, 1581, 1650, 1740, 1758
MslI CAYNNNNRTG 2 cut(s) 1062, 2010
Msp20I TGGCCA 2 cut(s) 5, 1014
MspA1I CMGCKG 1 cut(s) 949
MspI CCGG 4 cut(s) 333, 1038, 1346, 2078
MspR9I CCNGG 6 cut(s) 80, 334, 741, 749, 1123, 1752
MunI CAATTG 1 cut(s) 2043
Mva1269I GAATGC 1 cut(s) 1783
MvaI CCWGG 5 cut(s) 80, 741, 749, 1123, 1752
MwoI GCNNNNNNNGC 7 cut(s) 11, 20, 29, 722, 1238, 1797, 1870
NciI CCSGG 1 cut(s) 334
NcoI CCATGG 1 cut(s) 370
NdeI CATATG 1 cut(s) 703
NdeII GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
NlaIII CATG 9 cut(s) 205, 374, 928, 994, 1061, 1092, 1466, 1800, 2009
NlaIV GGNNCC 4 cut(s) 746, 753, 1569, 1749
NmuCI GTSAC 3 cut(s) 178, 1711, 1927
NsiI ATGCAT 1 cut(s) 1802
NspI RCATGY 3 cut(s) 994, 1800, 2009
PaeI GCATGC 1 cut(s) 2009
PaeR7I CTCGAG 1 cut(s) 295
PasI CCCWGGG 1 cut(s) 1122
PctI GAATGC 1 cut(s) 1783
PfeI GAWTC 5 cut(s) 62, 134, 307, 895, 1067
PflMI CCANNNNNTGG 2 cut(s) 506, 761
PleI GAGTC 4 cut(s) 175, 490, 1834, 1996
PmaCI CACGTG 1 cut(s) 728
PmlI CACGTG 1 cut(s) 728
PpsI GAGTC 4 cut(s) 175, 490, 1834, 1996
Ppu21I YACGTR 1 cut(s) 728
PpuMI RGGWCCY 2 cut(s) 751, 1193
PshAI GACNNNNGTC 1 cut(s) 949
Psp1406I AACGTT 1 cut(s) 648
Psp5II RGGWCCY 2 cut(s) 751, 1193
Psp6I CCWGG 5 cut(s) 78, 739, 747, 1121, 1750
PspCI CACGTG 1 cut(s) 728
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 5 cut(s) 78, 739, 747, 1121, 1750
PspN4I GGNNCC 4 cut(s) 746, 753, 1569, 1749
PspPI GGNCC 7 cut(s) 395, 455, 509, 751, 1193, 1431, 1568
PspPPI RGGWCCY 2 cut(s) 751, 1193
PstI CTGCAG 2 cut(s) 25, 2032
PstNI CAGNNNCTG 1 cut(s) 493
PsuI RGATCY 2 cut(s) 159, 1034
RsaI GTAC 7 cut(s) 293, 365, 746, 777, 964, 995, 1598
RsaNI GTAC 7 cut(s) 292, 364, 745, 776, 963, 994, 1597
RseI CAYNNNNRTG 2 cut(s) 1062, 2010
SalI GTCGAC 1 cut(s) 190
SaqAI TTAA 6 cut(s) 114, 1175, 1581, 1650, 1740, 1758
Sau3AI GATC 7 cut(s) 25, 159, 169, 205, 1034, 1764, 2039
Sau96I GGNCC 7 cut(s) 395, 455, 509, 751, 1193, 1431, 1568
ScaI AGTACT 2 cut(s) 293, 1598
SchI GAGTC 4 cut(s) 175, 490, 1835, 1997
ScrFI CCNGG 6 cut(s) 80, 334, 741, 749, 1123, 1752
SfaNI GCATC 4 cut(s) 790, 1351, 1422, 2047
SfcI CTRYAG 3 cut(s) 21, 528, 2028
Sfr274I CTCGAG 1 cut(s) 295
SinI GGWCC 2 cut(s) 751, 1193
SlaI CTCGAG 1 cut(s) 295
SmiMI CAYNNNNRTG 2 cut(s) 1062, 2010
SmlI CTYRAG 2 cut(s) 295, 1731
SmoI CTYRAG 2 cut(s) 295, 1731
SphI GCATGC 1 cut(s) 2009
SsiI CCGC 3 cut(s) 476, 947, 1831
SspI AATATT 1 cut(s) 1773
SspMI CTAG 2 cut(s) 1236, 2128
StyD4I CCNGG 6 cut(s) 78, 332, 739, 747, 1121, 1750
StyI CCWWGG 2 cut(s) 370, 791
TaaI ACNGT 8 cut(s) 10, 189, 390, 775, 908, 1030, 1667, 2123
TaiI ACGT 6 cut(s) 651, 730, 781, 1132, 1266, 1659
TaqI TCGA 5 cut(s) 191, 296, 665, 866, 1908
TaqII GACCGA 1 cut(s) 1513
TatI WGTACW 2 cut(s) 291, 1596
TfiI GAWTC 5 cut(s) 62, 134, 307, 895, 1067
Tru1I TTAA 6 cut(s) 114, 1175, 1581, 1650, 1740, 1758
Tru9I TTAA 6 cut(s) 114, 1175, 1581, 1650, 1740, 1758
TscAI CASTG 5 cut(s) 192, 498, 511, 1540, 2017
TseFI GTSAC 3 cut(s) 178, 1711, 1927
Tsp45I GTSAC 3 cut(s) 178, 1711, 1927
TspDTI ATGAA 8 cut(s) 190, 690, 913, 995, 1194, 1363, 1451, 1947
TspGWI ACGGA 2 cut(s) 166, 642
TspRI CASTG 5 cut(s) 192, 498, 511, 1540, 2017
Van91I CCANNNNNTGG 2 cut(s) 506, 761
VpaK11BI GGWCC 2 cut(s) 751, 1193
XapI RAATTY 7 cut(s) 84, 603, 879, 913, 1367, 1588, 1954
XceI RCATGY 3 cut(s) 994, 1800, 2009
XhoI CTCGAG 1 cut(s) 295
XmiI GTMKAC 1 cut(s) 191
XspI CTAG 2 cut(s) 1236, 2128
ZrmI AGTACT 2 cut(s) 293, 1598
Zsp2I ATGCAT 1 cut(s) 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.