MD12G1108700.v1.1

ACT domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
17239461 .. 17242762
3302 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1108700.v1.1.491

Sequence Viewer

Length: 1239 bp
ATGGGGATTCTGCATGAGGATGTGGTGCTCATCAAGCAGGCGGAGAAAGAAGGGGACCCAAGTGTAATTACAATCAATTGTCCGGACAAGACTGGCTTGGGTTGTGACTTGTGTCGCATCATTCTCTTCTTTGGTCTTAGCATTGTCCGGGGAGATGTATCGACGGATGGGAAATGGTGCTACTTAGTGTTTTGGGTGATAGGGAGTCCAGAGACAAGGTGGGGTTTGTTGAAGAAGAGGCTAGTGGGGACCTGCCCTTCTTGTTCTTCGGCTTCTGGGATTTCGTTCTACCGCTCCGAATTGCAGCCCCCAAAGCCTCCTGACGTGTTCCTTCTCAAGTTCTGTTGCTACAATCGACGAGGACTTTTACATGATGTAACGGGTGTCCTCTGTGAACTTGAGCTGACGATAAAGAAAGTTAAGGTATCCACAACTCCAGATGAGAAAGTGATGGACCTGTTTTTCGTCACAGACACCAGGGAACTTATGCATACAAATAAGAGAAGGGAGGAGGTATATGACTACTTAAAAGAAGTCATGGGGGACGCCATGATAAGTTGTGAAATTGAAACGGCTGGCCCTGAGATTACTGCATGTACGCAGGCGTCTTCATTTCTTCCAACTGCAATTACAGAAGACATGTTTGATTTGGAAATGCCCAAAGAACTCCGAAGTGGATCACTCACTTCCAAAAGTGTTTCTGTGACCATGGATAACACGCTCAGTCCTGGTCACACGCTGGTCCAAATCATTTGCATAGACCACAAAGGTCTTCTATATGATATAATGAGAACGCTGAAGGATTACAATATTCAGATCTCCTATGGGCGCTTCTCTATAAAACAAAAAAGGCACTGTGAGATTGACTTGTTTGTCATGCAAGCTGATGGAAAGAAGATAGTTGACTCCAGCAAGCAGACTGCATTGACATCCCGTTTGCAGCTGGAACTGATTCGTCCTCTCAGAGTAGCTATTGTTAACCGAGGTCCGGACACAGAGCTCCTTGTTGCAAACCCTGTGGAACTATCTGGCAAGGGCCGGCCTCTTGTTTTTTATGATATCACCCTTGCTTTCAAGATGCTGGACATTGGTGTCTTTTCGGCTAAGATTGGACGGCATCTGATTGGAGATAGGGAATGGGAAGTTTATAGAGTCTTAATTGACGAAGGAGTTGGCTTGTCAGTTCCAAGGAACACGATCGAGGAACAGGTTTGGAAGATGCTGATGGGTTGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

413

Amino Acids

46.42

Weight (kDa)

5.91

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACR10_N PF24914 11 - 86 2.9e-39 ACT domain-containing protein ACR10, N-terminal
ACT_ACR9_3rd PF24931 234 - 331 5.9e-49 ACR9-like, ACT-like domain
ACT_ACR9_C PF24926 332 - 410 2e-37 ACT domain-containing protein ACR9, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 872, 1091
Acc36I ACCTGC 1 cut(s) 260
AccBSI CCGCTC 1 cut(s) 294
AccIII TCCGGA 2 cut(s) 82, 988
AciI CCGC 2 cut(s) 41, 292
AclWI GGATC 1 cut(s) 685
AcuI CTGAAG 1 cut(s) 818
AcyI GRCGYC 2 cut(s) 546, 605
AfaI GTAC 1 cut(s) 598
AfiI CCNNNNNNNGG 1 cut(s) 988
AflIII ACRYGT 2 cut(s) 324, 639
AgsI TTSAA 3 cut(s) 232, 569, 1075
AjiI CACGTC 1 cut(s) 325
AjnI CCWGG 2 cut(s) 476, 727
AluBI AGCT 5 cut(s) 403, 884, 943, 971, 1000
AluI AGCT 5 cut(s) 403, 884, 943, 971, 1000
Alw21I GWGCWC 2 cut(s) 30, 1002
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 1 cut(s) 685
Aor13HI TCCGGA 2 cut(s) 82, 988
AoxI GGCC 3 cut(s) 577, 1036, 1040
ApeKI GCWGC 2 cut(s) 304, 940
ArsI GACNNNNNNTTYG 4 cut(s) 446, 478, 919, 951
Asp700I GAANNNNTTC 1 cut(s) 951
AspLEI GCGC 1 cut(s) 831
AspS9I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
AsuC2I CCSGG 1 cut(s) 149
AsuHPI GGTGA 2 cut(s) 208, 1054
AvaII GGWCC 5 cut(s) 55, 249, 454, 742, 986
BanII GRGCYC 1 cut(s) 1002
BbsI GAAGAC 3 cut(s) 600, 642, 764
Bbv12I GWGCWC 2 cut(s) 30, 1002
BbvI GCAGC 2 cut(s) 316, 952
BccI CCATC 4 cut(s) 161, 445, 881, 1219
BceAI ACGGC 2 cut(s) 588, 1130
BciT130I CCWGG 2 cut(s) 478, 729
BciVI GTATCC 1 cut(s) 436
BcnI CCSGG 1 cut(s) 149
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 1 cut(s) 242
BfoI RGCGCY 1 cut(s) 832
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 436
BglII AGATCT 1 cut(s) 816
BisI GCNGC 2 cut(s) 305, 941
BlsI GCNGC 2 cut(s) 306, 942
Bme1390I CCNGG 3 cut(s) 149, 478, 729
Bme18I GGWCC 5 cut(s) 55, 249, 454, 742, 986
BmgBI CACGTC 1 cut(s) 325
BmgT120I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
BmiI GGNNCC 3 cut(s) 56, 57, 250
BmrFI CCNGG 3 cut(s) 149, 478, 729
BmsI GCATC 4 cut(s) 126, 1068, 1126, 1209
BoxI GACNNNNGTC 1 cut(s) 111
BpiI GAAGAC 3 cut(s) 600, 642, 764
BpmI CTGGAG 2 cut(s) 420, 892
BpuEI CTTGAG 2 cut(s) 320, 419
BpuMI CCSGG 1 cut(s) 149
BsaHI GRCGYC 2 cut(s) 546, 605
BsaJI CCNNGG 5 cut(s) 148, 477, 708, 982, 1187
BsaWI WCCGGW 2 cut(s) 82, 988
Bsc4I CCNNNNNNNGG 1 cut(s) 988
Bse118I RCCGGY 1 cut(s) 1038
Bse1I ACTGG 1 cut(s) 97
BseAI TCCGGA 2 cut(s) 82, 988
BseBI CCWGG 2 cut(s) 478, 729
BseDI CCNNGG 5 cut(s) 148, 477, 708, 982, 1187
BseGI GGATG 3 cut(s) 25, 172, 929
BseLI CCNNNNNNNGG 1 cut(s) 988
BseMII CTCAG 3 cut(s) 573, 736, 976
BseNI ACTGG 1 cut(s) 97
BseRI GAGGAG 1 cut(s) 524
BseXI GCAGC 2 cut(s) 316, 952
Bsh1285I CGRYCG 1 cut(s) 1200
BshFI GGCC 3 cut(s) 579, 1038, 1042
BsiEI CGRYCG 1 cut(s) 1200
BsiHKAI GWGCWC 2 cut(s) 30, 1002
BsiSI CCGG 4 cut(s) 83, 148, 989, 1039
BslFI GGGAC 3 cut(s) 68, 262, 557
BslI CCNNNNNNNGG 1 cut(s) 988
BsmAI GTCTC 1 cut(s) 206
BsmFI GGGAC 3 cut(s) 68, 262, 557
BsnI GGCC 3 cut(s) 579, 1038, 1042
Bsp1286I GDGCHC 2 cut(s) 30, 1002
Bsp13I TCCGGA 2 cut(s) 82, 988
Bsp143I GATC 3 cut(s) 677, 816, 1197
Bsp19I CCATGG 1 cut(s) 708
BspACI CCGC 2 cut(s) 41, 292
BspANI GGCC 3 cut(s) 579, 1038, 1042
BspCNI CTCAG 3 cut(s) 574, 735, 975
BspEI TCCGGA 2 cut(s) 82, 988
BspLI GGNNCC 3 cut(s) 56, 57, 250
BspMI ACCTGC 1 cut(s) 260
BspPI GGATC 1 cut(s) 685
BsrBI CCGCTC 1 cut(s) 294
BsrFI RCCGGY 1 cut(s) 1038
BsrI ACTGG 1 cut(s) 97
BssAI RCCGGY 1 cut(s) 1038
BssECI CCNNGG 5 cut(s) 148, 477, 708, 982, 1187
BssMI GATC 3 cut(s) 677, 816, 1197
BssNI GRCGYC 2 cut(s) 546, 605
BssT1I CCWWGG 2 cut(s) 708, 1187
Bst2UI CCWGG 2 cut(s) 478, 729
Bst4CI ACNGT 1 cut(s) 857
Bst6I CTCTTC 2 cut(s) 131, 230
BstACI GRCGYC 2 cut(s) 546, 605
BstC8I GCNNGC 6 cut(s) 39, 577, 603, 882, 914, 1040
BstDEI CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
BstDSI CCRYGG 1 cut(s) 708
BstF5I GGATG 3 cut(s) 25, 172, 929
BstH2I RGCGCY 1 cut(s) 832
BstHHI GCGC 1 cut(s) 831
BstKTI GATC 3 cut(s) 680, 819, 1200
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 3 cut(s) 677, 816, 1197
BstMCI CGRYCG 1 cut(s) 1200
BstMWI GCNNNNNNNGC 2 cut(s) 34, 313
BstNI CCWGG 2 cut(s) 478, 729
BstNSI RCATGY 2 cut(s) 597, 643
BstPAI GACNNNNGTC 1 cut(s) 111
BstSCI CCNGG 3 cut(s) 147, 476, 727
BstV1I GCAGC 2 cut(s) 316, 952
BstV2I GAAGAC 3 cut(s) 600, 642, 764
BstX2I RGATCY 1 cut(s) 816
BstYI RGATCY 1 cut(s) 816
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 3 cut(s) 579, 1038, 1042
BtgI CCRYGG 1 cut(s) 708
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 3 cut(s) 25, 172, 929
BtsIMutI CAGTG 1 cut(s) 853
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 6 cut(s) 39, 577, 603, 882, 914, 1040
CfoI GCGC 1 cut(s) 831
Cfr10I RCCGGY 1 cut(s) 1038
Cfr13I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
CseI GACGC 2 cut(s) 554, 594
Csp6I GTAC 1 cut(s) 597
CspCI CAANNNNNGTGG 2 cut(s) 999, 1034
CviAII CATG 8 cut(s) 14, 371, 538, 550, 594, 640, 709, 877
CviQI GTAC 1 cut(s) 597
DdeI CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
DpnI GATC 3 cut(s) 679, 818, 1199
DpnII GATC 3 cut(s) 677, 816, 1197
DrdI GACNNNNNNGTC 2 cut(s) 872, 1091
DseDI GACNNNNNNGTC 2 cut(s) 872, 1091
Eam1104I CTCTTC 2 cut(s) 131, 230
EarI CTCTTC 2 cut(s) 131, 230
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 1 cut(s) 1000
Eco130I CCWWGG 2 cut(s) 708, 1187
Eco24I GRGCYC 1 cut(s) 1002
Eco32I GATATC 1 cut(s) 1060
Eco47I GGWCC 5 cut(s) 55, 249, 454, 742, 986
Eco53kI GAGCTC 1 cut(s) 1000
Eco57I CTGAAG 1 cut(s) 818
EcoICRI GAGCTC 1 cut(s) 1000
EcoO109I RGGNCCY 2 cut(s) 55, 249
EcoRII CCWGG 2 cut(s) 476, 727
EcoRV GATATC 1 cut(s) 1060
EcoT14I CCWWGG 2 cut(s) 708, 1187
EcoT22I ATGCAT 1 cut(s) 492
EcoT38I GRGCYC 1 cut(s) 1002
ErhI CCWWGG 2 cut(s) 708, 1187
FaeI CATG 8 cut(s) 17, 374, 541, 553, 597, 643, 712, 880
FalI AAGNNNNNCTT 2 cut(s) 80, 112
FaqI GGGAC 3 cut(s) 68, 262, 557
FatI CATG 8 cut(s) 13, 370, 537, 549, 593, 639, 708, 876
Fnu4HI GCNGC 2 cut(s) 305, 941
FokI GGATG 3 cut(s) 32, 179, 916
FriOI GRGCYC 1 cut(s) 1002
FseI GGCCGGCC 1 cut(s) 1042
Fsp4HI GCNGC 2 cut(s) 305, 941
FspBI CTAG 1 cut(s) 242
GlaI GCGC 1 cut(s) 830
GluI GCNGC 2 cut(s) 305, 941
GsuI CTGGAG 2 cut(s) 420, 892
HaeII RGCGCY 1 cut(s) 832
HaeIII GGCC 3 cut(s) 579, 1038, 1042
HapII CCGG 4 cut(s) 83, 148, 989, 1039
HgaI GACGC 2 cut(s) 554, 594
HhaI GCGC 1 cut(s) 831
Hin1I GRCGYC 2 cut(s) 546, 605
Hin1II CATG 8 cut(s) 17, 374, 541, 553, 597, 643, 712, 880
Hin6I GCGC 1 cut(s) 829
HinP1I GCGC 1 cut(s) 829
HincII GTYRAC 2 cut(s) 904, 979
HindII GTYRAC 2 cut(s) 904, 979
HinfI GANTC 5 cut(s) 7, 205, 905, 952, 1152
HpaI GTTAAC 1 cut(s) 979
HpaII CCGG 4 cut(s) 83, 148, 989, 1039
HphI GGTGA 2 cut(s) 208, 1054
Hpy166II GTNNAC 3 cut(s) 395, 904, 979
Hpy188I TCNGA 5 cut(s) 298, 671, 816, 965, 1122
Hpy188III TCNNGA 6 cut(s) 83, 209, 320, 437, 989, 1075
Hpy8I GTNNAC 3 cut(s) 395, 904, 979
Hpy99I CGWCG 2 cut(s) 166, 360
HpyAV CCTTC 6 cut(s) 44, 267, 341, 498, 793, 1160
HpyCH4III ACNGT 1 cut(s) 857
HpyCH4IV ACGT 1 cut(s) 324
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 313
HpyF3I CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
HpySE526I ACGT 1 cut(s) 324
Hsp92I GRCGYC 2 cut(s) 546, 605
Hsp92II CATG 8 cut(s) 17, 374, 541, 553, 597, 643, 712, 880
HspAI GCGC 1 cut(s) 829
KflI GGGWCCC 1 cut(s) 55
Kpn2I TCCGGA 2 cut(s) 82, 988
KroI GCCGGC 1 cut(s) 1038
KroNI GCCGGC 1 cut(s) 1040
KspAI GTTAAC 1 cut(s) 979
Kzo9I GATC 3 cut(s) 677, 816, 1197
LmnI GCTCC 2 cut(s) 299, 1005
Lsp1109I GCAGC 2 cut(s) 316, 952
LweI GCATC 4 cut(s) 126, 1068, 1126, 1209
MaeI CTAG 1 cut(s) 242
MaeII ACGT 1 cut(s) 324
MaeIII GTNAC 5 cut(s) 104, 376, 466, 703, 731
MalI GATC 3 cut(s) 679, 818, 1199
MbiI CCGCTC 1 cut(s) 294
MboI GATC 3 cut(s) 677, 816, 1197
MfeI CAATTG 1 cut(s) 76
MflI RGATCY 1 cut(s) 816
MhlI GDGCHC 2 cut(s) 30, 1002
MluCI AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
MlyI GAGTC 3 cut(s) 214, 899, 1161
MmeI TCCRAC 1 cut(s) 644
Mph1103I ATGCAT 1 cut(s) 492
MroI TCCGGA 2 cut(s) 82, 988
MroNI GCCGGC 1 cut(s) 1038
MroXI GAANNNNTTC 1 cut(s) 951
MseI TTAA 4 cut(s) 420, 527, 978, 1157
MslI CAYNNNNRTG 1 cut(s) 18
MspA1I CMGCKG 1 cut(s) 943
MspI CCGG 4 cut(s) 83, 148, 989, 1039
MspR9I CCNGG 3 cut(s) 149, 478, 729
MunI CAATTG 1 cut(s) 76
MvaI CCWGG 2 cut(s) 478, 729
MwoI GCNNNNNNNGC 2 cut(s) 34, 313
NaeI GCCGGC 1 cut(s) 1040
NciI CCSGG 1 cut(s) 149
NcoI CCATGG 1 cut(s) 708
NdeII GATC 3 cut(s) 677, 816, 1197
NgoMIV GCCGGC 1 cut(s) 1038
NlaIII CATG 8 cut(s) 17, 374, 541, 553, 597, 643, 712, 880
NlaIV GGNNCC 3 cut(s) 56, 57, 250
NmuCI GTSAC 4 cut(s) 104, 466, 703, 731
NsiI ATGCAT 1 cut(s) 492
NspI RCATGY 2 cut(s) 597, 643
PciI ACATGT 1 cut(s) 639
PdiI GCCGGC 1 cut(s) 1040
PdmI GAANNNNTTC 1 cut(s) 951
PfeI GAWTC 2 cut(s) 7, 952
PkrI GCNGC 2 cut(s) 306, 942
Ple19I CGATCG 1 cut(s) 1200
PleI GAGTC 3 cut(s) 213, 899, 1160
PpsI GAGTC 3 cut(s) 213, 899, 1160
PpuMI RGGWCCY 2 cut(s) 55, 249
PscI ACATGT 1 cut(s) 639
PshAI GACNNNNGTC 1 cut(s) 111
Psp124BI GAGCTC 1 cut(s) 1002
Psp5II RGGWCCY 2 cut(s) 55, 249
Psp6I CCWGG 2 cut(s) 476, 727
PspGI CCWGG 2 cut(s) 476, 727
PspN4I GGNNCC 3 cut(s) 56, 57, 250
PspPI GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
PspPPI RGGWCCY 2 cut(s) 55, 249
PsuI RGATCY 1 cut(s) 816
PvuI CGATCG 1 cut(s) 1200
PvuII CAGCTG 1 cut(s) 943
RigI GGCCGGCC 1 cut(s) 1042
RsaI GTAC 1 cut(s) 598
RsaNI GTAC 1 cut(s) 597
RseI CAYNNNNRTG 1 cut(s) 18
SacI GAGCTC 1 cut(s) 1002
SaqAI TTAA 4 cut(s) 420, 527, 978, 1157
SatI GCNGC 2 cut(s) 305, 941
Sau3AI GATC 3 cut(s) 677, 816, 1197
Sau96I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
SchI GAGTC 3 cut(s) 214, 899, 1161
ScrFI CCNGG 3 cut(s) 149, 478, 729
SduI GDGCHC 2 cut(s) 30, 1002
SfaNI GCATC 4 cut(s) 126, 1068, 1126, 1209
SinI GGWCC 5 cut(s) 55, 249, 454, 742, 986
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 2 cut(s) 335, 398
SmoI CTYRAG 2 cut(s) 335, 398
Sse9I AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
SsiI CCGC 2 cut(s) 41, 292
SspI AATATT 1 cut(s) 811
SspMI CTAG 1 cut(s) 242
SstI GAGCTC 1 cut(s) 1002
StyD4I CCNGG 3 cut(s) 147, 476, 727
StyI CCWWGG 2 cut(s) 708, 1187
TaaI ACNGT 1 cut(s) 857
TaiI ACGT 1 cut(s) 327
TaqI TCGA 3 cut(s) 161, 355, 1200
TasI AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
TfiI GAWTC 2 cut(s) 7, 952
Tru1I TTAA 4 cut(s) 420, 527, 978, 1157
Tru9I TTAA 4 cut(s) 420, 527, 978, 1157
TscAI CASTG 1 cut(s) 860
TseFI GTSAC 4 cut(s) 104, 466, 703, 731
TseI GCWGC 2 cut(s) 304, 940
Tsp45I GTSAC 4 cut(s) 104, 466, 703, 731
TspDTI ATGAA 1 cut(s) 600
TspGWI ACGGA 1 cut(s) 179
TspRI CASTG 1 cut(s) 860
VpaK11BI GGWCC 5 cut(s) 55, 249, 454, 742, 986
XceI RCATGY 2 cut(s) 597, 643
XcmI CCANNNNNNNNNTGG 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 951
XspI CTAG 1 cut(s) 242
Zsp2I ATGCAT 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.