pycom12g10900

ACT domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
13000543 .. 13003211
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g10900.2

Sequence Viewer

Length: 1239 bp
ATGGGGATTCTGCATGATGATGTGGTGATCATCACGCAGGCGGAGAAAGAAGGGGACCCAAGTGTAATTACAATCAATTGTCCGGACAAGACTGGCTTGGGTTGTGACTTGTGTCGCATCATTCTCTTCTTTGGTCTTAGCATTGTCCGGGGAGATGTATCGACGGATGGGAAATGGTGCTACTTAGTGTTTTGGGTGATTGGGAGTCCAGAGACAAGGTGGGGTTTGTTGAAGAAGAGGCTAGTGGGGACCTGCCCTTCTTGTTCTTCGGCTTCTGGGATTTCGTTCTACCGCTCCGAATTGCAGCCCCCAAAGCCTCCTGATGTGTTCCTTCTCAAGTTCTGTTGCTACAATCGACGAGGACTTTTGCATGATGTGACGGGTGTCCTCTGTGAACTTGAGCTGACGATAAAGAAAGTTAAGGTATCCACAACTCCAGATGAGAAAGTGATGGACCTGTTTTTCGTCACAGACACCAGGGAACTTATGCATACAAATAAGAGAAAGGAGGAGGTATATGACTACTTAAAAGAAGTCACGGGGGACGCCATGATAAGTTGTGGAATTGAAATGGTTGGCCCTGAGATTACTGCATGTTCGCAGGCATCTTCATTTCTTCCAACTGCAATTACAGAAGACATGTTTGATTTGGAAATGCCCAAAGAACTCCGAAGTGGATCACTCACTTCCAAAAGTGTTTCTGTGACTATGGATAACACGCTTAGTCCTGGTCACACGCTGGTCCAAATCAGTTGCATAGACCACAAAGGTCTTCTTTATGATATAATGAGAACGCTAAAGGATTACAATATTCAGATCTCTTATGGGCGCTTCTCTATAAAACAAAAAAGGCACTGTGAGATTGACTTGTTCGTCATGCAAGCTGATGGAAAGAAGATAGTTGACTCCAGCAAGCAGACTGCATTGACATCCCGTTTGCAGCTGGAACTGATTCGTCCTCTCAGAGTAGCTATTGTTAACCGCGGTCCGGACACAGAGCTCCTTGTTGCAAACCCTGTGGAACTATCTGGCAAGGGCCGGCCTCTTGTTTTTTATGATATCACCCTTGCTTTCAAGATGCTGGACGTTGGTGTCTTTTCGGCTAAGATTGGACGGCATCTGATTGCAGATAGGGAATGGGAAGTTTATAGAGTCTTAATTGACGAAGGAGTTGGCTTGTCAGTTCCAAGGAGCACGATTGAGGAACAAGTTTGGAAGATGCTGATGGGTTGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

413

Amino Acids

46.24

Weight (kDa)

5.91

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 872, 1091
Acc36I ACCTGC 1 cut(s) 260
AccBSI CCGCTC 1 cut(s) 294
AccII CGCG 1 cut(s) 984
AccIII TCCGGA 2 cut(s) 82, 988
AciI CCGC 4 cut(s) 41, 292, 982, 984
AclWI GGATC 1 cut(s) 685
AcyI GRCGYC 1 cut(s) 546
AfiI CCNNNNNNNGG 1 cut(s) 988
AflIII ACRYGT 1 cut(s) 639
AgsI TTSAA 3 cut(s) 232, 569, 1075
AjnI CCWGG 2 cut(s) 476, 727
AluBI AGCT 5 cut(s) 403, 884, 943, 971, 1000
AluI AGCT 5 cut(s) 403, 884, 943, 971, 1000
Alw21I GWGCWC 2 cut(s) 1002, 1196
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 1 cut(s) 685
Aor13HI TCCGGA 2 cut(s) 82, 988
AoxI GGCC 3 cut(s) 577, 1036, 1040
ApeKI GCWGC 2 cut(s) 304, 940
ArsI GACNNNNNNTTYG 4 cut(s) 446, 478, 919, 951
Asp700I GAANNNNTTC 1 cut(s) 951
AspLEI GCGC 1 cut(s) 831
AspS9I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
AsuC2I CCSGG 1 cut(s) 149
AsuHPI GGTGA 3 cut(s) 37, 208, 1054
AvaII GGWCC 5 cut(s) 55, 249, 454, 742, 986
BanII GRGCYC 1 cut(s) 1002
BbsI GAAGAC 2 cut(s) 642, 764
Bbv12I GWGCWC 2 cut(s) 1002, 1196
BbvI GCAGC 2 cut(s) 316, 952
BccI CCATC 4 cut(s) 161, 445, 881, 1219
BceAI ACGGC 1 cut(s) 1130
BciT130I CCWGG 2 cut(s) 478, 729
BciVI GTATCC 1 cut(s) 436
BclI TGATCA 1 cut(s) 27
BcnI CCSGG 1 cut(s) 149
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 1 cut(s) 242
BfoI RGCGCY 1 cut(s) 832
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 436
BglII AGATCT 1 cut(s) 816
BisI GCNGC 2 cut(s) 305, 941
BlsI GCNGC 2 cut(s) 306, 942
Bme1390I CCNGG 3 cut(s) 149, 478, 729
Bme18I GGWCC 5 cut(s) 55, 249, 454, 742, 986
BmgT120I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
BmiI GGNNCC 3 cut(s) 56, 57, 250
BmrFI CCNGG 3 cut(s) 149, 478, 729
BmsI GCATC 5 cut(s) 126, 614, 1068, 1126, 1209
BoxI GACNNNNGTC 2 cut(s) 111, 383
BpiI GAAGAC 2 cut(s) 642, 764
BpmI CTGGAG 2 cut(s) 420, 892
BpuEI CTTGAG 2 cut(s) 320, 419
BpuMI CCSGG 1 cut(s) 149
BsaHI GRCGYC 1 cut(s) 546
BsaJI CCNNGG 4 cut(s) 148, 477, 982, 1187
BsaWI WCCGGW 2 cut(s) 82, 988
Bsc4I CCNNNNNNNGG 1 cut(s) 988
Bse118I RCCGGY 1 cut(s) 1038
Bse1I ACTGG 1 cut(s) 97
BseAI TCCGGA 2 cut(s) 82, 988
BseBI CCWGG 2 cut(s) 478, 729
BseDI CCNNGG 4 cut(s) 148, 477, 982, 1187
BseGI GGATG 2 cut(s) 172, 929
BseLI CCNNNNNNNGG 1 cut(s) 988
BseMII CTCAG 2 cut(s) 573, 976
BseNI ACTGG 1 cut(s) 97
BseRI GAGGAG 1 cut(s) 524
BseXI GCAGC 2 cut(s) 316, 952
Bsh1236I CGCG 1 cut(s) 984
BshFI GGCC 3 cut(s) 579, 1038, 1042
BsiHKAI GWGCWC 2 cut(s) 1002, 1196
BsiSI CCGG 4 cut(s) 83, 148, 989, 1039
BslFI GGGAC 3 cut(s) 68, 262, 557
BslI CCNNNNNNNGG 1 cut(s) 988
BsmAI GTCTC 1 cut(s) 206
BsmFI GGGAC 3 cut(s) 68, 262, 557
BsnI GGCC 3 cut(s) 579, 1038, 1042
Bsp1286I GDGCHC 2 cut(s) 1002, 1196
Bsp13I TCCGGA 2 cut(s) 82, 988
Bsp143I GATC 3 cut(s) 27, 677, 816
BspACI CCGC 4 cut(s) 41, 292, 982, 984
BspANI GGCC 3 cut(s) 579, 1038, 1042
BspCNI CTCAG 2 cut(s) 574, 975
BspEI TCCGGA 2 cut(s) 82, 988
BspFNI CGCG 1 cut(s) 984
BspLI GGNNCC 3 cut(s) 56, 57, 250
BspMI ACCTGC 1 cut(s) 260
BspPI GGATC 1 cut(s) 685
BsrBI CCGCTC 1 cut(s) 294
BsrFI RCCGGY 1 cut(s) 1038
BsrI ACTGG 1 cut(s) 97
BssAI RCCGGY 1 cut(s) 1038
BssECI CCNNGG 4 cut(s) 148, 477, 982, 1187
BssMI GATC 3 cut(s) 27, 677, 816
BssNI GRCGYC 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 1187
Bst2UI CCWGG 2 cut(s) 478, 729
Bst4CI ACNGT 1 cut(s) 857
Bst6I CTCTTC 2 cut(s) 131, 230
BstACI GRCGYC 1 cut(s) 546
BstC8I GCNNGC 5 cut(s) 39, 603, 882, 914, 1040
BstDEI CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
BstDSI CCRYGG 1 cut(s) 982
BstF5I GGATG 2 cut(s) 172, 929
BstFNI CGCG 1 cut(s) 984
BstH2I RGCGCY 1 cut(s) 832
BstHHI GCGC 1 cut(s) 831
BstKTI GATC 3 cut(s) 30, 680, 819
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 3 cut(s) 27, 677, 816
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNI CCWGG 2 cut(s) 478, 729
BstNSI RCATGY 2 cut(s) 597, 643
BstPAI GACNNNNGTC 2 cut(s) 111, 383
BstSCI CCNGG 3 cut(s) 147, 476, 727
BstUI CGCG 1 cut(s) 984
BstV1I GCAGC 2 cut(s) 316, 952
BstV2I GAAGAC 2 cut(s) 642, 764
BstX2I RGATCY 1 cut(s) 816
BstYI RGATCY 1 cut(s) 816
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 3 cut(s) 579, 1038, 1042
BtgI CCRYGG 1 cut(s) 982
BtsCI GGATG 2 cut(s) 172, 929
BtsIMutI CAGTG 1 cut(s) 853
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 5 cut(s) 39, 603, 882, 914, 1040
CfoI GCGC 1 cut(s) 831
Cfr10I RCCGGY 1 cut(s) 1038
Cfr13I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
Cfr42I CCGCGG 1 cut(s) 985
CpoI CGGWCCG 1 cut(s) 986
CseI GACGC 1 cut(s) 554
CspCI CAANNNNNGTGG 2 cut(s) 999, 1034
CspI CGGWCCG 1 cut(s) 986
CviAII CATG 6 cut(s) 14, 371, 550, 594, 640, 877
DdeI CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
DpnI GATC 3 cut(s) 29, 679, 818
DpnII GATC 3 cut(s) 27, 677, 816
DrdI GACNNNNNNGTC 2 cut(s) 872, 1091
DseDI GACNNNNNNGTC 2 cut(s) 872, 1091
Eam1104I CTCTTC 2 cut(s) 131, 230
EarI CTCTTC 2 cut(s) 131, 230
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 1 cut(s) 1000
Eco130I CCWWGG 1 cut(s) 1187
Eco24I GRGCYC 1 cut(s) 1002
Eco32I GATATC 1 cut(s) 1060
Eco47I GGWCC 5 cut(s) 55, 249, 454, 742, 986
Eco53kI GAGCTC 1 cut(s) 1000
EcoICRI GAGCTC 1 cut(s) 1000
EcoO109I RGGNCCY 2 cut(s) 55, 249
EcoRII CCWGG 2 cut(s) 476, 727
EcoRV GATATC 1 cut(s) 1060
EcoT14I CCWWGG 1 cut(s) 1187
EcoT22I ATGCAT 1 cut(s) 492
EcoT38I GRGCYC 1 cut(s) 1002
ErhI CCWWGG 1 cut(s) 1187
FaeI CATG 6 cut(s) 17, 374, 553, 597, 643, 880
FalI AAGNNNNNCTT 4 cut(s) 80, 112, 759, 791
FaqI GGGAC 3 cut(s) 68, 262, 557
FatI CATG 6 cut(s) 13, 370, 549, 593, 639, 876
FbaI TGATCA 1 cut(s) 27
Fnu4HI GCNGC 2 cut(s) 305, 941
FokI GGATG 2 cut(s) 179, 916
FriOI GRGCYC 1 cut(s) 1002
FseI GGCCGGCC 1 cut(s) 1042
Fsp4HI GCNGC 2 cut(s) 305, 941
FspBI CTAG 1 cut(s) 242
GlaI GCGC 1 cut(s) 830
GluI GCNGC 2 cut(s) 305, 941
GsuI CTGGAG 2 cut(s) 420, 892
HaeII RGCGCY 1 cut(s) 832
HaeIII GGCC 3 cut(s) 579, 1038, 1042
HapII CCGG 4 cut(s) 83, 148, 989, 1039
HgaI GACGC 1 cut(s) 554
HhaI GCGC 1 cut(s) 831
Hin1I GRCGYC 1 cut(s) 546
Hin1II CATG 6 cut(s) 17, 374, 553, 597, 643, 880
Hin6I GCGC 1 cut(s) 829
HinP1I GCGC 1 cut(s) 829
HincII GTYRAC 2 cut(s) 904, 979
HindII GTYRAC 2 cut(s) 904, 979
HinfI GANTC 5 cut(s) 7, 205, 905, 952, 1152
HpaI GTTAAC 1 cut(s) 979
HpaII CCGG 4 cut(s) 83, 148, 989, 1039
HphI GGTGA 3 cut(s) 37, 208, 1054
Hpy166II GTNNAC 3 cut(s) 395, 904, 979
Hpy188I TCNGA 5 cut(s) 298, 671, 816, 965, 1122
Hpy188III TCNNGA 6 cut(s) 83, 209, 320, 437, 989, 1075
Hpy8I GTNNAC 3 cut(s) 395, 904, 979
Hpy99I CGWCG 2 cut(s) 166, 360
HpyAV CCTTC 4 cut(s) 44, 267, 341, 1160
HpyCH4III ACNGT 1 cut(s) 857
HpyCH4IV ACGT 1 cut(s) 1086
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 6 cut(s) 137, 184, 582, 722, 962, 1104
HpySE526I ACGT 1 cut(s) 1086
Hsp92I GRCGYC 1 cut(s) 546
Hsp92II CATG 6 cut(s) 17, 374, 553, 597, 643, 880
HspAI GCGC 1 cut(s) 829
KflI GGGWCCC 1 cut(s) 55
Kpn2I TCCGGA 2 cut(s) 82, 988
KroI GCCGGC 1 cut(s) 1038
KroNI GCCGGC 1 cut(s) 1040
Ksp22I TGATCA 1 cut(s) 27
KspAI GTTAAC 1 cut(s) 979
KspI CCGCGG 1 cut(s) 985
Kzo9I GATC 3 cut(s) 27, 677, 816
LmnI GCTCC 3 cut(s) 299, 1005, 1191
Lsp1109I GCAGC 2 cut(s) 316, 952
LweI GCATC 5 cut(s) 126, 614, 1068, 1126, 1209
MaeI CTAG 1 cut(s) 242
MaeII ACGT 1 cut(s) 1086
MaeIII GTNAC 6 cut(s) 104, 376, 466, 535, 703, 731
MalI GATC 3 cut(s) 29, 679, 818
MbiI CCGCTC 1 cut(s) 294
MboI GATC 3 cut(s) 27, 677, 816
MfeI CAATTG 1 cut(s) 76
MflI RGATCY 1 cut(s) 816
MhlI GDGCHC 2 cut(s) 1002, 1196
MluCI AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
MlyI GAGTC 3 cut(s) 214, 899, 1161
MmeI TCCRAC 1 cut(s) 644
MnlI CCTC 9 cut(s) 231, 327, 353, 398, 502, 505, 969, 1053, 1195
Mph1103I ATGCAT 1 cut(s) 492
MroI TCCGGA 2 cut(s) 82, 988
MroNI GCCGGC 1 cut(s) 1038
MroXI GAANNNNTTC 1 cut(s) 951
MseI TTAA 4 cut(s) 420, 527, 978, 1157
MslI CAYNNNNRTG 1 cut(s) 18
MspA1I CMGCKG 2 cut(s) 943, 984
MspI CCGG 4 cut(s) 83, 148, 989, 1039
MspR9I CCNGG 3 cut(s) 149, 478, 729
MunI CAATTG 1 cut(s) 76
MvaI CCWGG 2 cut(s) 478, 729
MvnI CGCG 1 cut(s) 984
MwoI GCNNNNNNNGC 1 cut(s) 313
NaeI GCCGGC 1 cut(s) 1040
NciI CCSGG 1 cut(s) 149
NdeII GATC 3 cut(s) 27, 677, 816
NgoMIV GCCGGC 1 cut(s) 1038
NlaIII CATG 6 cut(s) 17, 374, 553, 597, 643, 880
NlaIV GGNNCC 3 cut(s) 56, 57, 250
NmuCI GTSAC 6 cut(s) 104, 376, 466, 535, 703, 731
NsiI ATGCAT 1 cut(s) 492
NspI RCATGY 2 cut(s) 597, 643
PciI ACATGT 1 cut(s) 639
PdiI GCCGGC 1 cut(s) 1040
PdmI GAANNNNTTC 1 cut(s) 951
PfeI GAWTC 2 cut(s) 7, 952
PkrI GCNGC 2 cut(s) 306, 942
PleI GAGTC 3 cut(s) 213, 899, 1160
PpsI GAGTC 3 cut(s) 213, 899, 1160
PpuMI RGGWCCY 2 cut(s) 55, 249
PscI ACATGT 1 cut(s) 639
PshAI GACNNNNGTC 2 cut(s) 111, 383
Psp124BI GAGCTC 1 cut(s) 1002
Psp5II RGGWCCY 2 cut(s) 55, 249
Psp6I CCWGG 2 cut(s) 476, 727
PspGI CCWGG 2 cut(s) 476, 727
PspN4I GGNNCC 3 cut(s) 56, 57, 250
PspPI GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
PspPPI RGGWCCY 2 cut(s) 55, 249
PsuI RGATCY 1 cut(s) 816
PvuII CAGCTG 1 cut(s) 943
RigI GGCCGGCC 1 cut(s) 1042
RseI CAYNNNNRTG 1 cut(s) 18
Rsr2I CGGWCCG 1 cut(s) 986
RsrII CGGWCCG 1 cut(s) 986
SacI GAGCTC 1 cut(s) 1002
SacII CCGCGG 1 cut(s) 985
SaqAI TTAA 4 cut(s) 420, 527, 978, 1157
SatI GCNGC 2 cut(s) 305, 941
Sau3AI GATC 3 cut(s) 27, 677, 816
Sau96I GGNCC 7 cut(s) 55, 249, 454, 578, 742, 986, 1036
SchI GAGTC 3 cut(s) 214, 899, 1161
ScrFI CCNGG 3 cut(s) 149, 478, 729
SduI GDGCHC 2 cut(s) 1002, 1196
SfaNI GCATC 5 cut(s) 126, 614, 1068, 1126, 1209
Sfr303I CCGCGG 1 cut(s) 985
SgrBI CCGCGG 1 cut(s) 985
SinI GGWCC 5 cut(s) 55, 249, 454, 742, 986
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 2 cut(s) 335, 398
SmoI CTYRAG 2 cut(s) 335, 398
Sse9I AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
SsiI CCGC 4 cut(s) 41, 292, 982, 984
SspI AATATT 1 cut(s) 811
SspMI CTAG 1 cut(s) 242
SstI GAGCTC 1 cut(s) 1002
StyD4I CCNGG 3 cut(s) 147, 476, 727
StyI CCWWGG 1 cut(s) 1187
TaaI ACNGT 1 cut(s) 857
TaiI ACGT 1 cut(s) 1089
TaqI TCGA 2 cut(s) 161, 355
TasI AATT 6 cut(s) 66, 76, 299, 564, 627, 1158
TfiI GAWTC 2 cut(s) 7, 952
Tru1I TTAA 4 cut(s) 420, 527, 978, 1157
Tru9I TTAA 4 cut(s) 420, 527, 978, 1157
TscAI CASTG 1 cut(s) 860
TseFI GTSAC 6 cut(s) 104, 376, 466, 535, 703, 731
TseI GCWGC 2 cut(s) 304, 940
Tsp45I GTSAC 6 cut(s) 104, 376, 466, 535, 703, 731
TspDTI ATGAA 1 cut(s) 600
TspGWI ACGGA 1 cut(s) 179
TspRI CASTG 1 cut(s) 860
VpaK11BI GGWCC 5 cut(s) 55, 249, 454, 742, 986
XceI RCATGY 2 cut(s) 597, 643
XcmI CCANNNNNNNNNTGG 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 951
XspI CTAG 1 cut(s) 242
Zsp2I ATGCAT 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.