Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004386

Physical Location & Seq

Genomic Coordinates Reverse (-)

14826727 .. 14830499

Gene Structure 3773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G127300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGGTATTCTACATGATGATGTAGTGATCATAACGCAGGCAGAGAAAGAGGGAGACCCAAGTGTGATTACAATAAATTGTCCTGACAAGACTGGCTTGGGTTGTGACTTGTGCCGCATCATTCTCTGCTTTGGTCTTAGCATTGTCAGAGGAGATGTATCAACGGATGGGAAATGGTGCTACATAGTGTTTTGGGTTATTGGGAGTCCAGAGACAAGATGGGGTTTGTTGAAGAAGAGGCTAGTGGGGACCTGTCCTTCTTGTTCCTCAGCTTCTGGGATTTCCTTTTACCGGTCTGAATTGCAGCCACCAAAGCCTCCTGATGTGTTCCTTCTCAAGTTCTGTTGTTATGATCGAAGAGGGCTCTTACATGATGTGACAGGGGTTCTCTGTGAACTCGAGCTGACCATCAAGAAAGTTAAGGTATCCACCACGCCAGATGAGAAAGTGATGGACCTGTTTTTCATCACAGACACCAGGGAACTTCTGCATACAAATAAGAGAAAGGAGGAGGTGTCTGACTACTTAAAAGCAGTCACGGGAGATGCCATGATAAGTTGTGAAATTGAAATGGTTGGTCCTGAGATTACTGCATGTTCGCAGGGGTCTTCATTTCTTCCATCTGCAATTACCGAAGACATGTTTGATTTGGAAATGCCCGCTGAACTCCCAAGTGGATCACTCACCTCCAGAAGTGTTTCTGTGACTATGGACAACACGCTGAGTCCTGGTCACACGCTGGTCCAAATCATTTGCAAAGACCACAAGGGTCTTCTTTATGATATAATGAGAACGCTAAAGGATTACAATATTCAGATCTCTTATGGCCGCTTCTCTATAAAACAAAGAAGACACTGTGAGATTGACTTGTTCATCGTGCAAACTGATGGAAAGAAGATAGTTGACCCTAGCAAACAGAATGCATTGAGATCCCGCTTGCAGCTGGAACTGCTTCGTCCTCTCAGAGTAGCTATTGTTAACCGAGGTCCAGACACAGAGCTGCTGGTTGCAAACCCTGTGGAATTATCTGGCAAGGGCCGGCCTCTTGTTTTTTATGATATCACCCTTGCTTTCAAGATGCTGAACACTGGCGTCTTTTCGGCTAAGATTGGACGGCATCTAATTGGAGATAGGGAATGGGAAGTTTATAGAGTCTTGATTGATGAAGGGGATGGCTTGTCAGTTCCGAGGAACAAGATTGAAGAACAAGTTTGGAAGATGTTGATGGGTTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ACT

Protein Analysis

413

Amino Acids

46.24

Weight (kDa)

5.91

Isoelectric Point (pI)

43.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004386)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36840
fragaria_vesca	FvH4_6g16600 FvH4_6g16600 FvH4_7g18540
malus_domestica	MD01G1101800.v1.1 MD04G1090700.v1.1 MD12G1108700.v1.1
prunus_persica	Prupe.2G207000_v2.0.a1 Prupe.7G127300_v2.0.a1
pyrus_communis	pycom01g12840 pycom04g08590 pycom12g10900
rosa_chinensis	RchiOBHm_Chr1g0362321 RchiOBHm_Chr2g0171731 RchiOBHm_Chr3g0470541
rosa_laevigata	RLG00000024260 RLG00000027651
rosa_multiflora	Rmu_sc0002115.1_g000012 Rmu_sc0020251.1_g000001
rosa_roxburghii	Rroxscaffold_4G00294250 Rroxscaffold_6G00410740
rosa_rugosa	Rorug01G0297600 Rorug01G0297700 Rorug03G0109900
rosa_samantha	Rh1AG306300 Rh1DG300000 Rh3AG160000 Rh3BG184600 Rh3CG175100 Rh3DG190100
rosa_wichuraiana	Rw1G027190 Rw3G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	115, 660, 829, 934
AclWI	GGATC	2 cut(s)	685, 924
AcoI	YGGCCR	1 cut(s)	826
AcyI	GRCGYC	1 cut(s)	1092
AfiI	CCNNNNNNNGG	1 cut(s)	291
AflIII	ACRYGT	1 cut(s)	639
AgeI	ACCGGT	1 cut(s)	291
AgsI	TTSAA	4 cut(s)	232, 569, 1075, 1202
AjnI	CCWGG	2 cut(s)	476, 727
AluBI	AGCT	5 cut(s)	272, 403, 943, 971, 1000
AluI	AGCT	5 cut(s)	272, 403, 943, 971, 1000
Alw26I	GTCTC	2 cut(s)	48, 206
AlwI	GGATC	2 cut(s)	685, 924
AlwNI	CAGNNNCTG	1 cut(s)	275
Ama87I	CYCGRG	1 cut(s)	398
AoxI	GGCC	3 cut(s)	826, 1036, 1040
ApeKI	GCWGC	3 cut(s)	304, 940, 1000
AsiGI	ACCGGT	1 cut(s)	291
Asp700I	GAANNNNTTC	2 cut(s)	697, 951
AspS9I	GGNCC	6 cut(s)	249, 454, 578, 742, 986, 1036
AsuHPI	GGTGA	2 cut(s)	676, 1054
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	5 cut(s)	249, 454, 578, 742, 986
BanII	GRGCYC	1 cut(s)	366
BbsI	GAAGAC	4 cut(s)	600, 642, 764, 856
BbvCI	CCTCAGC	1 cut(s)	268
BbvI	GCAGC	3 cut(s)	316, 952, 987
BccI	CCATC	8 cut(s)	161, 213, 416, 445, 628, 881, 1166, 1219
BceAI	ACGGC	1 cut(s)	1130
BciT130I	CCWGG	2 cut(s)	478, 729
BciVI	GTATCC	1 cut(s)	436
BclI	TGATCA	1 cut(s)	27
BcoDI	GTCTC	2 cut(s)	48, 206
BfaI	CTAG	2 cut(s)	242, 909
BfuI	GTATCC	1 cut(s)	436
BglII	AGATCT	1 cut(s)	816
BisI	GCNGC	5 cut(s)	115, 305, 829, 941, 1001
BlsI	GCNGC	5 cut(s)	116, 306, 830, 942, 1002
Bme1390I	CCNGG	2 cut(s)	478, 729
Bme18I	GGWCC	5 cut(s)	249, 454, 578, 742, 986
BmeT110I	CYCGRG	1 cut(s)	398
BmgT120I	GGNCC	6 cut(s)	249, 454, 578, 742, 986, 1036
BmiI	GGNNCC	1 cut(s)	250
BmrFI	CCNGG	2 cut(s)	478, 729
BmsI	GCATC	4 cut(s)	126, 535, 1068, 1126
BpiI	GAAGAC	4 cut(s)	600, 642, 764, 856
BpmI	CTGGAG	1 cut(s)	673
Bpu10I	CCTNAGC	1 cut(s)	268
BpuEI	CTTGAG	1 cut(s)	320
BsaHI	GRCGYC	1 cut(s)	1092
BsaI	GGTCTC	1 cut(s)	48
BsaJI	CCNNGG	3 cut(s)	477, 982, 1187
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	2 cut(s)	500, 530
Bsc4I	CCNNNNNNNGG	1 cut(s)	291
Bse118I	RCCGGY	2 cut(s)	291, 1038
Bse1I	ACTGG	2 cut(s)	97, 1093
BseBI	CCWGG	2 cut(s)	478, 729
BseDI	CCNNGG	3 cut(s)	477, 982, 1187
BseGI	GGATG	2 cut(s)	172, 1177
BseLI	CCNNNNNNNGG	1 cut(s)	291
BseMII	CTCAG	4 cut(s)	282, 573, 713, 976
BseNI	ACTGG	2 cut(s)	97, 1093
BseRI	GAGGAG	2 cut(s)	165, 524
BseXI	GCAGC	3 cut(s)	316, 952, 987
BshFI	GGCC	3 cut(s)	828, 1038, 1042
BshTI	ACCGGT	1 cut(s)	291
BsiHKCI	CYCGRG	1 cut(s)	398
BsiSI	CCGG	2 cut(s)	292, 1039
BslFI	GGGAC	1 cut(s)	262
BslI	CCNNNNNNNGG	1 cut(s)	291
BsmAI	GTCTC	2 cut(s)	48, 206
BsmFI	GGGAC	1 cut(s)	262
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	3 cut(s)	828, 1038, 1042
Bso31I	GGTCTC	1 cut(s)	48
BsoBI	CYCGRG	1 cut(s)	398
Bsp1286I	GDGCHC	1 cut(s)	366
Bsp143I	GATC	5 cut(s)	27, 352, 677, 816, 929
BspACI	CCGC	4 cut(s)	115, 660, 829, 934
BspANI	GGCC	3 cut(s)	828, 1038, 1042
BspCNI	CTCAG	4 cut(s)	281, 574, 714, 975
BspLI	GGNNCC	1 cut(s)	250
BspPI	GGATC	2 cut(s)	685, 924
BspTNI	GGTCTC	1 cut(s)	48
BsrFI	RCCGGY	2 cut(s)	291, 1038
BsrI	ACTGG	2 cut(s)	97, 1093
BssAI	RCCGGY	2 cut(s)	291, 1038
BssECI	CCNNGG	3 cut(s)	477, 982, 1187
BssMI	GATC	5 cut(s)	27, 352, 677, 816, 929
BssNI	GRCGYC	1 cut(s)	1092
Bst2UI	CCWGG	2 cut(s)	478, 729
Bst4CI	ACNGT	1 cut(s)	857
Bst6I	CTCTTC	2 cut(s)	230, 352
BstACI	GRCGYC	1 cut(s)	1092
BstC8I	GCNNGC	4 cut(s)	39, 660, 938, 1040
BstDEI	CTNAG	6 cut(s)	137, 268, 582, 722, 962, 1104
BstF5I	GGATG	2 cut(s)	172, 1177
BstKTI	GATC	5 cut(s)	30, 355, 680, 819, 932
BstMAI	GTCTC	2 cut(s)	48, 206
BstMBI	GATC	5 cut(s)	27, 352, 677, 816, 929
BstMWI	GCNNNNNNNGC	2 cut(s)	313, 949
BstNI	CCWGG	2 cut(s)	478, 729
BstNSI	RCATGY	2 cut(s)	597, 643
BstSCI	CCNGG	2 cut(s)	476, 727
BstV1I	GCAGC	3 cut(s)	316, 952, 987
BstV2I	GAAGAC	4 cut(s)	600, 642, 764, 856
BstX2I	RGATCY	2 cut(s)	816, 929
BstYI	RGATCY	2 cut(s)	816, 929
BsuI	GTATCC	1 cut(s)	436
BsuRI	GGCC	3 cut(s)	828, 1038, 1042
BtsCI	GGATG	2 cut(s)	172, 1177
BtsIMutI	CAGTG	2 cut(s)	853, 1086
Cac8I	GCNNGC	4 cut(s)	39, 660, 938, 1040
CaiI	CAGNNNCTG	1 cut(s)	275
Cfr10I	RCCGGY	2 cut(s)	291, 1038
Cfr13I	GGNCC	6 cut(s)	249, 454, 578, 742, 986, 1036
CseI	GACGC	1 cut(s)	1081
CspAI	ACCGGT	1 cut(s)	291
CspCI	CAANNNNNGTGG	2 cut(s)	999, 1034
CviAII	CATG	5 cut(s)	14, 371, 550, 594, 640
DdeI	CTNAG	6 cut(s)	137, 268, 582, 722, 962, 1104
DpnI	GATC	5 cut(s)	29, 354, 679, 818, 931
DpnII	GATC	5 cut(s)	27, 352, 677, 816, 929
EaeI	YGGCCR	1 cut(s)	826
Eam1104I	CTCTTC	2 cut(s)	230, 352
EarI	CTCTTC	2 cut(s)	230, 352
Eco24I	GRGCYC	1 cut(s)	366
Eco31I	GGTCTC	1 cut(s)	48
Eco32I	GATATC	1 cut(s)	1060
Eco47I	GGWCC	5 cut(s)	249, 454, 578, 742, 986
Eco88I	CYCGRG	1 cut(s)	398
EcoO109I	RGGNCCY	1 cut(s)	249
EcoRII	CCWGG	2 cut(s)	476, 727
EcoRV	GATATC	1 cut(s)	1060
EcoT22I	ATGCAT	1 cut(s)	925
EcoT38I	GRGCYC	1 cut(s)	366
FaeI	CATG	5 cut(s)	17, 374, 553, 597, 643
FalI	AAGNNNNNCTT	2 cut(s)	80, 112
FaqI	GGGAC	1 cut(s)	262
FatI	CATG	5 cut(s)	13, 370, 549, 593, 639
FauI	CCCGC	2 cut(s)	667, 941
FbaI	TGATCA	1 cut(s)	27
Fnu4HI	GCNGC	5 cut(s)	115, 305, 829, 941, 1001
FokI	GGATG	2 cut(s)	179, 1184
FriOI	GRGCYC	1 cut(s)	366
FseI	GGCCGGCC	1 cut(s)	1042
Fsp4HI	GCNGC	5 cut(s)	115, 305, 829, 941, 1001
FspBI	CTAG	2 cut(s)	242, 909
GluI	GCNGC	5 cut(s)	115, 305, 829, 941, 1001
GsuI	CTGGAG	1 cut(s)	673
HaeIII	GGCC	3 cut(s)	828, 1038, 1042
HapII	CCGG	2 cut(s)	292, 1039
HgaI	GACGC	1 cut(s)	1081
Hin1I	GRCGYC	1 cut(s)	1092
Hin1II	CATG	5 cut(s)	17, 374, 553, 597, 643
HincII	GTYRAC	2 cut(s)	904, 979
HindII	GTYRAC	2 cut(s)	904, 979
HinfI	GANTC	3 cut(s)	205, 724, 1152
HpaI	GTTAAC	1 cut(s)	979
HpaII	CCGG	2 cut(s)	292, 1039
HphI	GGTGA	2 cut(s)	676, 1054
Hpy166II	GTNNAC	3 cut(s)	395, 904, 979
Hpy188I	TCNGA	6 cut(s)	149, 298, 520, 816, 965, 1188
Hpy188III	TCNNGA	9 cut(s)	83, 209, 320, 412, 581, 690, 989, 1075, 1156
Hpy8I	GTNNAC	3 cut(s)	395, 904, 979
HpyAV	CCTTC	3 cut(s)	267, 341, 1160
HpyCH4III	ACNGT	1 cut(s)	857
HpyCH4V	TGCA	9 cut(s)	304, 490, 593, 626, 756, 880, 923, 940, 1010
HpyF10VI	GCNNNNNNNGC	2 cut(s)	313, 949
HpyF3I	CTNAG	6 cut(s)	137, 268, 582, 722, 962, 1104
Hsp92I	GRCGYC	1 cut(s)	1092
Hsp92II	CATG	5 cut(s)	17, 374, 553, 597, 643
KroI	GCCGGC	1 cut(s)	1038
KroNI	GCCGGC	1 cut(s)	1040
Ksp22I	TGATCA	1 cut(s)	27
KspAI	GTTAAC	1 cut(s)	979
Kzo9I	GATC	5 cut(s)	27, 352, 677, 816, 929
Lsp1109I	GCAGC	3 cut(s)	316, 952, 987
LweI	GCATC	4 cut(s)	126, 535, 1068, 1126
MaeI	CTAG	2 cut(s)	242, 909
MaeIII	GTNAC	5 cut(s)	104, 376, 535, 703, 731
MalI	GATC	5 cut(s)	29, 354, 679, 818, 931
MboI	GATC	5 cut(s)	27, 352, 677, 816, 929
MflI	RGATCY	2 cut(s)	816, 929
MhlI	GDGCHC	1 cut(s)	366
MluCI	AATT	6 cut(s)	76, 299, 564, 627, 1022, 1122
MlyI	GAGTC	3 cut(s)	214, 733, 1161
Mph1103I	ATGCAT	1 cut(s)	925
MroNI	GCCGGC	1 cut(s)	1038
MroXI	GAANNNNTTC	2 cut(s)	697, 951
MseI	TTAA	3 cut(s)	420, 527, 978
MslI	CAYNNNNRTG	1 cut(s)	18
MspA1I	CMGCKG	2 cut(s)	662, 943
MspI	CCGG	2 cut(s)	292, 1039
MspR9I	CCNGG	2 cut(s)	478, 729
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	2 cut(s)	478, 729
MwoI	GCNNNNNNNGC	2 cut(s)	313, 949
NaeI	GCCGGC	1 cut(s)	1040
NdeII	GATC	5 cut(s)	27, 352, 677, 816, 929
NgoMIV	GCCGGC	1 cut(s)	1038
NlaIII	CATG	5 cut(s)	17, 374, 553, 597, 643
NlaIV	GGNNCC	1 cut(s)	250
NmuCI	GTSAC	5 cut(s)	104, 376, 535, 703, 731
NsiI	ATGCAT	1 cut(s)	925
NspI	RCATGY	2 cut(s)	597, 643
PaeR7I	CTCGAG	1 cut(s)	398
PciI	ACATGT	1 cut(s)	639
PctI	GAATGC	1 cut(s)	925
PdiI	GCCGGC	1 cut(s)	1040
PdmI	GAANNNNTTC	2 cut(s)	697, 951
PinAI	ACCGGT	1 cut(s)	291
PkrI	GCNGC	5 cut(s)	116, 306, 830, 942, 1002
PleI	GAGTC	3 cut(s)	213, 732, 1160
PpsI	GAGTC	3 cut(s)	213, 732, 1160
PpuMI	RGGWCCY	1 cut(s)	249
PscI	ACATGT	1 cut(s)	639
Psp5II	RGGWCCY	1 cut(s)	249
Psp6I	CCWGG	2 cut(s)	476, 727
PspGI	CCWGG	2 cut(s)	476, 727
PspN4I	GGNNCC	1 cut(s)	250
PspPI	GGNCC	6 cut(s)	249, 454, 578, 742, 986, 1036
PspPPI	RGGWCCY	1 cut(s)	249
PspXI	VCTCGAGB	1 cut(s)	398
PstNI	CAGNNNCTG	1 cut(s)	275
PsuI	RGATCY	2 cut(s)	816, 929
PvuII	CAGCTG	1 cut(s)	943
RigI	GGCCGGCC	1 cut(s)	1042
RseI	CAYNNNNRTG	1 cut(s)	18
SaqAI	TTAA	3 cut(s)	420, 527, 978
SatI	GCNGC	5 cut(s)	115, 305, 829, 941, 1001
Sau3AI	GATC	5 cut(s)	27, 352, 677, 816, 929
Sau96I	GGNCC	6 cut(s)	249, 454, 578, 742, 986, 1036
SchI	GAGTC	3 cut(s)	214, 733, 1161
ScrFI	CCNGG	2 cut(s)	478, 729
SduI	GDGCHC	1 cut(s)	366
SfaNI	GCATC	4 cut(s)	126, 535, 1068, 1126
Sfr274I	CTCGAG	1 cut(s)	398
SinI	GGWCC	5 cut(s)	249, 454, 578, 742, 986
SlaI	CTCGAG	1 cut(s)	398
SmiMI	CAYNNNNRTG	1 cut(s)	18
SmlI	CTYRAG	2 cut(s)	335, 398
SmoI	CTYRAG	2 cut(s)	335, 398
Sse9I	AATT	6 cut(s)	76, 299, 564, 627, 1022, 1122
SsiI	CCGC	4 cut(s)	115, 660, 829, 934
SspI	AATATT	1 cut(s)	811
SspMI	CTAG	2 cut(s)	242, 909
StyD4I	CCNGG	2 cut(s)	476, 727
TaaI	ACNGT	1 cut(s)	857
TaqI	TCGA	2 cut(s)	355, 399
TasI	AATT	6 cut(s)	76, 299, 564, 627, 1022, 1122
TauI	GCSGC	2 cut(s)	117, 831
Tru1I	TTAA	3 cut(s)	420, 527, 978
Tru9I	TTAA	3 cut(s)	420, 527, 978
TscAI	CASTG	2 cut(s)	860, 1093
TseFI	GTSAC	5 cut(s)	104, 376, 535, 703, 731
TseI	GCWGC	3 cut(s)	304, 940, 1000
Tsp45I	GTSAC	5 cut(s)	104, 376, 535, 703, 731
TspDTI	ATGAA	4 cut(s)	454, 600, 862, 1179
TspGWI	ACGGA	1 cut(s)	179
TspRI	CASTG	2 cut(s)	860, 1093
VpaK11BI	GGWCC	5 cut(s)	249, 454, 578, 742, 986
XceI	RCATGY	2 cut(s)	597, 643
XcmI	CCANNNNNNNNNTGG	1 cut(s)	216
XhoI	CTCGAG	1 cut(s)	398
XmnI	GAANNNNTTC	2 cut(s)	697, 951
XspI	CTAG	2 cut(s)	242, 909
Zsp2I	ATGCAT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.