Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004539

Physical Location & Seq

Genomic Coordinates Reverse (-)

5508465 .. 5510590

Gene Structure 2126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1078300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGGATCTGGCTACTAGTGCTGTAAAATCTGAACTGATCAGCCCCAGGAGGCGTCCGTTGTGCACGATAGAAGTTGACGCTTTGGTGAGCAAGTGCGTCAAAAGGAGGCGCCGTGATTCGTCTGCTGTTGCTGCTGCACCTGCTCCAGGAAACACTGATCAGCAAGGTGATCAAAGACTAAAGCAGCAGGCTCAGGCTGATCAATCTCCTACTAGTACTACCACGACGACAACTGTGAAGAGAAGTTCCAGATTTCGTGGAGTCAGCCGGCATCGATGGACAGGAAGATATGAAGCTCATTTATGGGATAAAGGGTCTTGGAACCCAACACAAAGGAAGAAGGGAAAGCAAGTTTATTTGGGGGCTTATGATGAAGAAGAATCTGCTGCAAGAGCCTATGATTTGGCAGCACTCAAGTATTGGGGAACATCAACCTTTACAAATTTTCCGGTGCCTGATTATGAGAGTGAAATTGAGATAATGAACACCTTAACAAAAGAAGAATATTTAGCCTCTCTGAGAAGAAGGAGCAGTGGCTTTTCAAGAGGTGTATCCAAATATAGAGGAGTTGCAAGGCACCATCACAATGGGAGATGGGAAGCAAGGATAGGGAGAGTTTTCGGAAACAAGTACCTCTACCTCGGCACTTATGGTACCCAGGAAGAGGCTGCTCATGCTTATGATATTGCAGCGATAGAATACAGAGGCATAAACGCAGTGACCAACTTTGACTTGAGCACATACATCAGATGGCTGAGGCCAGGAGCCAACTCTCTTGGCCCTCAGGAACCGAAATCGAATCCGGATCAGCCTCTCCCCATGCCTACTTCCTCAAATGGCGTCCCTCTGAGAAAGGAAGGAAGACAGATGTCCATGTTCCAACCCAACTCCTTCGCCGTAGATGACAAAGACGCCTCAAAAAATCACGACATTTTCCCAAGGCAGCAGCAGCCTCCTATGCCCGTTAGCCCCTGCCCCAAGTCATCACCTTCCCCAACAGCACTTGGCATCCTCCTTCAATCCTCAATATTTAAAGAGCTGGTGGAAAAGAATTTAAATGGAGATAATGAAGAGAGTGAGAAGAATGATTTAAACCTTCTTCCGGAACAGAACAACAGCGACAATATTAAGCGGACTTTGTACGAAGGAATGCGAAATAATCCCTTTACGTGTTCTTCAAACAACTGCGTTTTGCCCGCATTAGAGTCACAGGAGGAGAGCCTGCTGCCCTTGTGCAACTCCAGGGACCAACCCCTTTGGAATGGTGTCTTAAACATGTTTACTTCCCCGGACTTTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006109 GO:0006110 GO:0006140 GO:0006355 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009743 GO:0009744 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019220 GO:0019222 GO:0019432 GO:0030808 GO:0030811 GO:0031323 GO:0031326 GO:0031329 GO:0034285 GO:0042221 GO:0042325 GO:0043467 GO:0043470 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0048518 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051193 GO:0051196 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1900371 GO:1900542 GO:1901363 GO:1901576 GO:1901700 GO:1901957 GO:1901959 GO:1903506 GO:1903578 GO:2000112 GO:2001141 GO:2001169

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

434

Amino Acids

48.7

Weight (kDa)

8.96

Isoelectric Point (pI)

69.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	83 - 142	1.8e-11	AP2 domain
AP2	PF00847	185 - 236	2.2e-12	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004539)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g31880 FvH4_6g49200
malus_domestica	MD09G1047600.v1.1 MD09G1047800.v1.1 MD13G1078300.v1.1 MD17G1047900.v1.1
prunus_persica	Prupe.1G268800_v2.0.a1 Prupe.3G271200_v2.0.a1 Prupe.3G271400_v2.0.a1
pyrus_communis	pycom17g04250 pycom17g04270
rosa_chinensis	RchiOBHm_Chr2g0169071 RchiOBHm_Chr4g0440541
rosa_laevigata	RLG00000006169 RLG00000021831
rosa_multiflora	Rmu_co8472159.1_g000001 Rmu_sc0016635.1_g000002 Rmu_sc0037701.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082490 Rroxscaffold_3G00226840 Rroxscaffold_5G00381370
rosa_rugosa	Rorug02G0536600 Rorug04G0326600
rosa_samantha	Rh2AG608500 Rh2BG621300 Rh2CG590100 Rh2DG632000 Rh4CG405600 Rh4DG384600
rosa_wichuraiana	Rw2G050450 Rw4G032380 Rw4G032480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	148
Acc36I	ACCTGC	1 cut(s)	148
Acc65I	GGTACC	1 cut(s)	653
AccB1I	GGYRCC	4 cut(s)	108, 451, 576, 653
AccIII	TCCGGA	2 cut(s)	802, 1102
AciI	CCGC	2 cut(s)	1132, 1197
AclWI	GGATC	2 cut(s)	12, 813
AcsI	RAATTY	2 cut(s)	442, 1051
AcyI	GRCGYC	4 cut(s)	52, 109, 840, 912
AfaI	GTAC	4 cut(s)	217, 632, 655, 1142
AfiI	CCNNNNNNNGG	3 cut(s)	146, 664, 1102
AflIII	ACRYGT	2 cut(s)	1169, 1275
AgsI	TTSAA	3 cut(s)	543, 1019, 1179
AhlI	ACTAGT	2 cut(s)	14, 212
AjnI	CCWGG	5 cut(s)	44, 145, 657, 760, 1241
AluBI	AGCT	2 cut(s)	296, 1039
AluI	AGCT	2 cut(s)	296, 1039
Alw21I	GWGCWC	2 cut(s)	65, 740
Alw44I	GTGCAC	1 cut(s)	61
AlwI	GGATC	2 cut(s)	12, 813
Aor13HI	TCCGGA	2 cut(s)	802, 1102
AoxI	GGCC	2 cut(s)	758, 778
ApaLI	GTGCAC	1 cut(s)	61
ApoI	RAATTY	2 cut(s)	442, 1051
Asp718I	GGTACC	1 cut(s)	653
AspLEI	GCGC	1 cut(s)	111
AspS9I	GGNCC	2 cut(s)	779, 1246
AsuC2I	CCSGG	1 cut(s)	1289
AsuHPI	GGTGA	3 cut(s)	97, 179, 978
AvaII	GGWCC	1 cut(s)	1246
AxyI	CCTNAGG	1 cut(s)	783
BaeGI	GKGCMC	1 cut(s)	65
BanI	GGYRCC	4 cut(s)	108, 451, 576, 653
BbsI	GAAGAC	1 cut(s)	868
Bbv12I	GWGCWC	2 cut(s)	65, 740
BbvCI	CCTCAGC	1 cut(s)	755
BccI	CCATC	4 cut(s)	270, 588, 588, 744
BceAI	ACGGC	2 cut(s)	96, 881
BciT130I	CCWGG	5 cut(s)	46, 147, 659, 762, 1243
BciVI	GTATCC	1 cut(s)	562
BclI	TGATCA	4 cut(s)	36, 157, 169, 199
BcnI	CCSGG	1 cut(s)	1289
BcuI	ACTAGT	2 cut(s)	14, 212
BfaI	CTAG	2 cut(s)	15, 213
BfoI	RGCGCY	1 cut(s)	112
BfuAI	ACCTGC	1 cut(s)	148
BfuI	GTATCC	1 cut(s)	562
BmcAI	AGTACT	1 cut(s)	217
Bme1390I	CCNGG	6 cut(s)	46, 147, 659, 762, 1243, 1289
Bme18I	GGWCC	1 cut(s)	1246
BmgT120I	GGNCC	2 cut(s)	779, 1246
BmiI	GGNNCC	8 cut(s)	110, 323, 453, 578, 655, 766, 789, 1247
BmrFI	CCNGG	6 cut(s)	46, 147, 659, 762, 1243, 1289
BmsI	GCATC	2 cut(s)	280, 1017
BoxI	GACNNNNGTC	1 cut(s)	868
BpiI	GAAGAC	1 cut(s)	868
BpmI	CTGGAG	2 cut(s)	129, 1225
Bpu10I	CCTNAGC	2 cut(s)	192, 755
BpuEI	CTTGAG	2 cut(s)	398, 754
BpuMI	CCSGG	1 cut(s)	1289
Bsa29I	ATCGAT	1 cut(s)	274
BsaAI	YACGTR	1 cut(s)	1170
BsaHI	GRCGYC	4 cut(s)	52, 109, 840, 912
BsaJI	CCNNGG	6 cut(s)	44, 640, 657, 938, 1242, 1287
BsaWI	WCCGGW	3 cut(s)	448, 802, 1102
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	3 cut(s)	146, 664, 1102
Bse118I	RCCGGY	1 cut(s)	267
Bse21I	CCTNAGG	1 cut(s)	783
BseAI	TCCGGA	2 cut(s)	802, 1102
BseBI	CCWGG	5 cut(s)	46, 147, 659, 762, 1243
BseCI	ATCGAT	1 cut(s)	274
BseDI	CCNNGG	6 cut(s)	44, 640, 657, 938, 1242, 1287
BseGI	GGATG	1 cut(s)	1008
BseLI	CCNNNNNNNGG	3 cut(s)	146, 664, 1102
BseMII	CTCAG	5 cut(s)	206, 509, 746, 797, 839
BseRI	GAGGAG	2 cut(s)	579, 1229
BseSI	GKGCMC	1 cut(s)	65
BsgI	GTGCAG	1 cut(s)	120
BshFI	GGCC	2 cut(s)	760, 780
BshNI	GGYRCC	4 cut(s)	108, 451, 576, 653
BshVI	ATCGAT	1 cut(s)	274
BsiHKAI	GWGCWC	2 cut(s)	65, 740
BsiSI	CCGG	5 cut(s)	268, 449, 803, 1103, 1289
BslFI	GGGAC	2 cut(s)	827, 1259
BslI	CCNNNNNNNGG	3 cut(s)	146, 664, 1102
BsmFI	GGGAC	2 cut(s)	827, 1259
BsmI	GAATGC	1 cut(s)	1155
BsnI	GGCC	2 cut(s)	760, 780
Bsp1286I	GDGCHC	2 cut(s)	65, 740
Bsp13I	TCCGGA	2 cut(s)	802, 1102
Bsp143I	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
BspACI	CCGC	2 cut(s)	1132, 1197
BspANI	GGCC	2 cut(s)	760, 780
BspCNI	CTCAG	5 cut(s)	205, 510, 747, 796, 840
BspDI	ATCGAT	1 cut(s)	274
BspEI	TCCGGA	2 cut(s)	802, 1102
BspLI	GGNNCC	8 cut(s)	110, 323, 453, 578, 655, 766, 789, 1247
BspMI	ACCTGC	1 cut(s)	148
BspPI	GGATC	2 cut(s)	12, 813
BspT107I	GGYRCC	4 cut(s)	108, 451, 576, 653
BsrFI	RCCGGY	1 cut(s)	267
BssAI	RCCGGY	1 cut(s)	267
BssECI	CCNNGG	6 cut(s)	44, 640, 657, 938, 1242, 1287
BssMI	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
BssNI	GRCGYC	4 cut(s)	52, 109, 840, 912
BssT1I	CCWWGG	1 cut(s)	938
Bst2UI	CCWGG	5 cut(s)	46, 147, 659, 762, 1243
Bst4CI	ACNGT	1 cut(s)	235
Bst6I	CTCTTC	3 cut(s)	233, 657, 1065
BstACI	GRCGYC	4 cut(s)	52, 109, 840, 912
BstBAI	YACGTR	1 cut(s)	1170
BstC8I	GCNNGC	4 cut(s)	189, 269, 1197, 1223
BstDEI	CTNAG	5 cut(s)	192, 518, 755, 783, 848
BstENI	CCTNNNNNAGG	1 cut(s)	144
BstF5I	GGATG	1 cut(s)	1008
BstH2I	RGCGCY	1 cut(s)	112
BstHHI	GCGC	1 cut(s)	111
BstKTI	GATC	6 cut(s)	7, 39, 160, 172, 202, 808
BstMBI	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
BstMWI	GCNNNNNNNGC	7 cut(s)	17, 131, 140, 392, 674, 949, 958
BstNI	CCWGG	5 cut(s)	46, 147, 659, 762, 1243
BstNSI	RCATGY	1 cut(s)	1279
BstPAI	GACNNNNGTC	1 cut(s)	868
BstSCI	CCNGG	6 cut(s)	44, 145, 657, 760, 1241, 1287
BstSLI	GKGCMC	1 cut(s)	65
BstV2I	GAAGAC	1 cut(s)	868
BstX2I	RGATCY	1 cut(s)	4
BstXI	CCANNNNNNTGG	1 cut(s)	587
BstYI	RGATCY	1 cut(s)	4
Bsu15I	ATCGAT	1 cut(s)	274
Bsu36I	CCTNAGG	1 cut(s)	783
BsuI	GTATCC	1 cut(s)	562
BsuRI	GGCC	2 cut(s)	760, 780
BsuTUI	ATCGAT	1 cut(s)	274
BtsCI	GGATG	1 cut(s)	1008
BtsI	GCAGTG	2 cut(s)	538, 723
BtsIMutI	CAGTG	3 cut(s)	153, 538, 723
BveI	ACCTGC	1 cut(s)	148
Cac8I	GCNNGC	4 cut(s)	189, 269, 1197, 1223
CfoI	GCGC	1 cut(s)	111
Cfr10I	RCCGGY	1 cut(s)	267
Cfr13I	GGNCC	2 cut(s)	779, 1246
ClaI	ATCGAT	1 cut(s)	274
CseI	GACGC	5 cut(s)	41, 85, 86, 829, 920
Csp6I	GTAC	4 cut(s)	216, 631, 654, 1141
CviAII	CATG	4 cut(s)	674, 820, 874, 1276
CviQI	GTAC	4 cut(s)	216, 631, 654, 1141
DdeI	CTNAG	5 cut(s)	192, 518, 755, 783, 848
DinI	GGCGCC	1 cut(s)	110
DpnI	GATC	6 cut(s)	6, 38, 159, 171, 201, 807
DpnII	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
DraI	TTTAAA	3 cut(s)	1033, 1056, 1092
Eam1104I	CTCTTC	3 cut(s)	233, 657, 1065
EarI	CTCTTC	3 cut(s)	233, 657, 1065
Eco130I	CCWWGG	1 cut(s)	938
Eco47I	GGWCC	1 cut(s)	1246
Eco81I	CCTNAGG	1 cut(s)	783
EcoNI	CCTNNNNNAGG	1 cut(s)	144
EcoRII	CCWGG	5 cut(s)	44, 145, 657, 760, 1241
EcoT14I	CCWWGG	1 cut(s)	938
EgeI	GGCGCC	1 cut(s)	110
EheI	GGCGCC	1 cut(s)	110
ErhI	CCWWGG	1 cut(s)	938
FaeI	CATG	4 cut(s)	677, 823, 877, 1279
FaqI	GGGAC	2 cut(s)	827, 1259
FatI	CATG	4 cut(s)	673, 819, 873, 1275
FauI	CCCGC	1 cut(s)	1204
FbaI	TGATCA	4 cut(s)	36, 157, 169, 199
FokI	GGATG	1 cut(s)	995
FspBI	CTAG	2 cut(s)	15, 213
GlaI	GCGC	1 cut(s)	110
GsuI	CTGGAG	2 cut(s)	129, 1225
HaeII	RGCGCY	1 cut(s)	112
HaeIII	GGCC	2 cut(s)	760, 780
HapII	CCGG	5 cut(s)	268, 449, 803, 1103, 1289
HgaI	GACGC	5 cut(s)	41, 85, 86, 829, 920
HhaI	GCGC	1 cut(s)	111
Hin1I	GRCGYC	4 cut(s)	52, 109, 840, 912
Hin1II	CATG	4 cut(s)	677, 823, 877, 1279
Hin6I	GCGC	1 cut(s)	109
HinP1I	GCGC	1 cut(s)	109
HincII	GTYRAC	1 cut(s)	76
HindII	GTYRAC	1 cut(s)	76
HinfI	GANTC	5 cut(s)	116, 261, 380, 799, 1205
HpaII	CCGG	5 cut(s)	268, 449, 803, 1103, 1289
HphI	GGTGA	3 cut(s)	97, 179, 978
Hpy166II	GTNNAC	3 cut(s)	63, 76, 1281
Hpy188I	TCNGA	5 cut(s)	31, 519, 623, 749, 849
Hpy188III	TCNNGA	6 cut(s)	249, 543, 785, 803, 926, 1103
Hpy8I	GTNNAC	3 cut(s)	63, 76, 1281
Hpy99I	CGWCG	1 cut(s)	229
HpyAV	CCTTC	8 cut(s)	334, 519, 851, 901, 999, 1025, 1106, 1139
HpyCH4III	ACNGT	1 cut(s)	235
HpyCH4IV	ACGT	1 cut(s)	1169
HpyCH4V	TGCA	6 cut(s)	63, 137, 389, 572, 689, 1236
HpyF10VI	GCNNNNNNNGC	7 cut(s)	17, 131, 140, 392, 674, 949, 958
HpyF3I	CTNAG	5 cut(s)	192, 518, 755, 783, 848
HpySE526I	ACGT	1 cut(s)	1169
Hsp92I	GRCGYC	4 cut(s)	52, 109, 840, 912
Hsp92II	CATG	4 cut(s)	677, 823, 877, 1279
HspAI	GCGC	1 cut(s)	109
KasI	GGCGCC	1 cut(s)	108
Kpn2I	TCCGGA	2 cut(s)	802, 1102
KpnI	GGTACC	1 cut(s)	657
KroI	GCCGGC	1 cut(s)	267
KroNI	GCCGGC	1 cut(s)	269
Ksp22I	TGATCA	4 cut(s)	36, 157, 169, 199
Kzo9I	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
LmnI	GCTCC	3 cut(s)	148, 528, 764
LweI	GCATC	2 cut(s)	280, 1017
MaeI	CTAG	2 cut(s)	15, 213
MaeII	ACGT	1 cut(s)	1169
MaeIII	GTNAC	2 cut(s)	718, 1206
MalI	GATC	6 cut(s)	6, 38, 159, 171, 201, 807
MboI	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
MflI	RGATCY	1 cut(s)	4
MhlI	GDGCHC	2 cut(s)	65, 740
MluCI	AATT	3 cut(s)	442, 471, 1051
Mly113I	GGCGCC	1 cut(s)	109
MlyI	GAGTC	2 cut(s)	270, 1214
MmeI	TCCRAC	1 cut(s)	904
MroI	TCCGGA	2 cut(s)	802, 1102
MroNI	GCCGGC	1 cut(s)	267
MseI	TTAA	7 cut(s)	491, 1032, 1055, 1091, 1128, 1271, 1296
MslI	CAYNNNNRTG	2 cut(s)	585, 678
MspI	CCGG	5 cut(s)	268, 449, 803, 1103, 1289
MspR9I	CCNGG	6 cut(s)	46, 147, 659, 762, 1243, 1289
Mva1269I	GAATGC	1 cut(s)	1155
MvaI	CCWGG	5 cut(s)	46, 147, 659, 762, 1243
MwoI	GCNNNNNNNGC	7 cut(s)	17, 131, 140, 392, 674, 949, 958
NaeI	GCCGGC	1 cut(s)	269
NarI	GGCGCC	1 cut(s)	109
NciI	CCSGG	1 cut(s)	1289
NdeII	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
NgoMIV	GCCGGC	1 cut(s)	267
NlaIII	CATG	4 cut(s)	677, 823, 877, 1279
NlaIV	GGNNCC	8 cut(s)	110, 323, 453, 578, 655, 766, 789, 1247
NmeAIII	GCCGAG	1 cut(s)	621
NmuCI	GTSAC	2 cut(s)	718, 1206
NspI	RCATGY	1 cut(s)	1279
PaqCI	CACCTGC	1 cut(s)	148
PciI	ACATGT	1 cut(s)	1275
PctI	GAATGC	1 cut(s)	1155
PdiI	GCCGGC	1 cut(s)	269
PfeI	GAWTC	3 cut(s)	116, 380, 799
PfoI	TCCNGGA	1 cut(s)	145
PleI	GAGTC	2 cut(s)	269, 1213
PluTI	GGCGCC	1 cut(s)	112
PpsI	GAGTC	2 cut(s)	269, 1213
Ppu21I	YACGTR	1 cut(s)	1170
PscI	ACATGT	1 cut(s)	1275
PshAI	GACNNNNGTC	1 cut(s)	868
Psp6I	CCWGG	5 cut(s)	44, 145, 657, 760, 1241
PspGI	CCWGG	5 cut(s)	44, 145, 657, 760, 1241
PspN4I	GGNNCC	8 cut(s)	110, 323, 453, 578, 655, 766, 789, 1247
PspPI	GGNCC	2 cut(s)	779, 1246
PsuI	RGATCY	1 cut(s)	4
RsaI	GTAC	4 cut(s)	217, 632, 655, 1142
RsaNI	GTAC	4 cut(s)	216, 631, 654, 1141
RseI	CAYNNNNRTG	2 cut(s)	585, 678
SaqAI	TTAA	7 cut(s)	491, 1032, 1055, 1091, 1128, 1271, 1296
Sau3AI	GATC	6 cut(s)	4, 36, 157, 169, 199, 805
Sau96I	GGNCC	2 cut(s)	779, 1246
ScaI	AGTACT	1 cut(s)	217
SchI	GAGTC	2 cut(s)	270, 1214
ScrFI	CCNGG	6 cut(s)	46, 147, 659, 762, 1243, 1289
SduI	GDGCHC	2 cut(s)	65, 740
SfaNI	GCATC	2 cut(s)	280, 1017
SfoI	GGCGCC	1 cut(s)	110
SinI	GGWCC	1 cut(s)	1246
SmiI	ATTTAAAT	1 cut(s)	1056
SmiMI	CAYNNNNRTG	2 cut(s)	585, 678
SmlI	CTYRAG	2 cut(s)	413, 733
SmoI	CTYRAG	2 cut(s)	413, 733
SpeI	ACTAGT	2 cut(s)	14, 212
Sse9I	AATT	3 cut(s)	442, 471, 1051
SsiI	CCGC	2 cut(s)	1132, 1197
SspDI	GGCGCC	1 cut(s)	108
SspI	AATATT	3 cut(s)	506, 1029, 1126
SspMI	CTAG	2 cut(s)	15, 213
StyD4I	CCNGG	6 cut(s)	44, 145, 657, 760, 1241, 1287
StyI	CCWWGG	1 cut(s)	938
SwaI	ATTTAAAT	1 cut(s)	1056
TaaI	ACNGT	1 cut(s)	235
TaiI	ACGT	1 cut(s)	1172
TaqI	TCGA	2 cut(s)	274, 797
TasI	AATT	3 cut(s)	442, 471, 1051
TatI	WGTACW	1 cut(s)	215
TfiI	GAWTC	3 cut(s)	116, 380, 799
Tru1I	TTAA	7 cut(s)	491, 1032, 1055, 1091, 1128, 1271, 1296
Tru9I	TTAA	7 cut(s)	491, 1032, 1055, 1091, 1128, 1271, 1296
TscAI	CASTG	3 cut(s)	160, 538, 723
TseFI	GTSAC	2 cut(s)	718, 1206
Tsp45I	GTSAC	2 cut(s)	718, 1206
TspDTI	ATGAA	4 cut(s)	306, 387, 497, 1083
TspGWI	ACGGA	1 cut(s)	45
TspRI	CASTG	3 cut(s)	160, 538, 723
VneI	GTGCAC	1 cut(s)	61
VpaK11BI	GGWCC	1 cut(s)	1246
XagI	CCTNNNNNAGG	1 cut(s)	144
XapI	RAATTY	2 cut(s)	442, 1051
XceI	RCATGY	1 cut(s)	1279
XspI	CTAG	2 cut(s)	15, 213
ZrmI	AGTACT	1 cut(s)	217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.