Prupe.1G268800_v2.0.a1

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27612739 .. 27614687
1949 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G268800.1

Sequence Viewer

Length: 1302 bp
ATGGATCATCTGACTAGTGTAAAATCTGAACTGAGCCAAGGAAGGCGTCCATTGTGCATTATAGAAGTTGATGCTTTGGTTAACAAGTGTGTCAAGAGACGGCGCAGAGATTCGTCTGCTGTTGTTGCACCTGCAGGCTGCAGTGATCAACAGCAAGGTGATCAAAGACCACAACAGCAGGCGCAGCAGGCTGGTCAATCTACCGTTGCTACGACCACAACTGTGAAGAGAAGTTCCAGATTTCGCGGAGTCAGCAGGCATCGATGGACAGGAAGATATGAAGCTCATTTATGGGATAAAGGTTCTTGGAACCCAACACAAAGGAAGAAGGGAAAGCAAGGGGCTTATGATGAAGAAGAATCTGCTGCAAGGGCTTATGATTTGGCAGCACTAAAGTACTGGGGAACATCAACTTTTACCAATTTTCCGGTGCCTGATTATGAGAATGAAATTGAGATAATGAACACATTATCCAAGGAAGAATATTTAGCCTCTCTGAGAAGAAGGAGCAGTGGCTTTTCAAGAGGTGTATCCAAATACAGAGGAGTTGCAAGGCTGAACTGTTGTGGAAACTGCAGGCACCATCACAATGGGAGATGGGAAGCAAGAATAGGGAGAGTGTTTGGAAACAAGTACCTCTACCTTGGCACTTACGGCACCCAGGAAGAGGCTGCTCATGCCTATGACATTGCAGCAATAGAATACAGAGGCATAAATGCAGTGACCAACTTTGACTTGAGCACATACATCAGATGGCTGAGACCAGGAGCCAATTCTCTTGGTTCTCAGGAACCAAAACTAAACACAGAGTCTCTGCCCATGCCAGCCTCCTCTAACAGCATCCCAAGCAAGGAAGGAAAGCAGATGTCCATGTTCCAACCCAACTCTTTCCCAGTAGATGACATAGACACCTCGAGAAATCGTGACATATTCCAAAGGCAGCAGAAGCAGCCTATGCCCATCAGCCCTTGCACCAAGTCATCATCTTCCCCAACAGCACTTGGGCTCCTCCTTCAATCCTCAATATTCAAAGAGCTGGTGGAAAAGAATTTAAATGGACATAATGAAGAAAGTGAGAAGAATGACATAAGGAACCTTCTTCCAGTGCAGACAAACAGTGACAATCTTAAGAGGATCTTGTACAATGGAATGCACAATAACCCTTTTACATGTCCTTCCAACACCAGTGTTTTGCCTGCTTTAGAGTCGCAGGAGGAGAGCATATTGCCCTTGTGCAATTCGAGGGGGCAGTCAATTTGGAATGGTGCCATAAACATGTTTTCTTCCCCTGACTTTAACTAA

Protein Analysis

434

Amino Acids

48.7

Weight (kDa)

9.18

Isoelectric Point (pI)

70.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 139
Acc36I ACCTGC 1 cut(s) 139
AccB1I GGYRCC 4 cut(s) 430, 579, 656, 1265
AccII CGCG 1 cut(s) 246
AciI CCGC 1 cut(s) 246
AclWI GGATC 2 cut(s) 12, 1142
AcsI RAATTY 1 cut(s) 1048
AcyI GRCGYC 1 cut(s) 46
AfaI GTAC 3 cut(s) 398, 635, 1142
AfiI CCNNNNNNNGG 2 cut(s) 667, 850
AflII CTTAAG 1 cut(s) 1127
AflIII ACRYGT 2 cut(s) 1169, 1275
AgsI TTSAA 3 cut(s) 522, 1016, 1030
AhlI ACTAGT 1 cut(s) 14
AjnI CCWGG 2 cut(s) 660, 763
AleI CACNNNNGTG 1 cut(s) 221
AloI GAACNNNNNNTCC 2 cut(s) 455, 487
AluBI AGCT 2 cut(s) 284, 1036
AluI AGCT 2 cut(s) 284, 1036
Alw21I GWGCWC 1 cut(s) 743
Alw26I GTCTC 3 cut(s) 91, 754, 816
AlwI GGATC 2 cut(s) 12, 1142
Ama87I CYCGRG 1 cut(s) 913
ApeKI GCWGC 8 cut(s) 138, 184, 365, 386, 671, 692, 940, 949
ApoI RAATTY 1 cut(s) 1048
AspLEI GCGC 2 cut(s) 105, 184
AsuHPI GGTGA 1 cut(s) 170
AvaI CYCGRG 1 cut(s) 913
BanI GGYRCC 4 cut(s) 430, 579, 656, 1265
BanII GRGCYC 1 cut(s) 1008
Bbv12I GWGCWC 1 cut(s) 743
BbvI GCAGC 8 cut(s) 125, 196, 352, 398, 658, 704, 952, 961
BccI CCATC 5 cut(s) 258, 591, 591, 747, 968
BceAI ACGGC 2 cut(s) 116, 670
BciT130I CCWGG 2 cut(s) 662, 765
BciVI GTATCC 1 cut(s) 541
BclI TGATCA 2 cut(s) 145, 160
BcoDI GTCTC 3 cut(s) 91, 754, 816
BcuI ACTAGT 1 cut(s) 14
BfaI CTAG 1 cut(s) 15
BfmI CTRYAG 3 cut(s) 132, 139, 574
BfrI CTTAAG 1 cut(s) 1127
BfuAI ACCTGC 1 cut(s) 139
BfuI GTATCC 1 cut(s) 541
BisI GCNGC 8 cut(s) 139, 185, 366, 387, 672, 693, 941, 950
BlsI GCNGC 8 cut(s) 140, 186, 367, 388, 673, 694, 942, 951
BmcAI AGTACT 1 cut(s) 398
Bme1390I CCNGG 2 cut(s) 662, 765
BmeT110I CYCGRG 1 cut(s) 913
BmiI GGNNCC 9 cut(s) 311, 432, 581, 658, 769, 792, 1007, 1094, 1267
BmrFI CCNGG 2 cut(s) 662, 765
BmrI ACTGGG 2 cut(s) 409, 887
BmsI GCATC 3 cut(s) 61, 268, 849
BmuI ACTGGG 2 cut(s) 409, 887
BpuEI CTTGAG 1 cut(s) 757
Bsa29I ATCGAT 1 cut(s) 262
BsaHI GRCGYC 1 cut(s) 46
BsaI GGTCTC 1 cut(s) 754
BsaJI CCNNGG 4 cut(s) 37, 474, 643, 660
BsaWI WCCGGW 1 cut(s) 427
BsaXI ACNNNNNCTCC 2 cut(s) 990, 1020
Bsc4I CCNNNNNNNGG 2 cut(s) 667, 850
Bse1I ACTGG 4 cut(s) 404, 893, 1103, 1185
Bse3DI GCAATG 1 cut(s) 687
BseBI CCWGG 2 cut(s) 662, 765
BseCI ATCGAT 1 cut(s) 262
BseDI CCNNGG 4 cut(s) 37, 474, 643, 660
BseGI GGATG 1 cut(s) 840
BseLI CCNNNNNNNGG 2 cut(s) 667, 850
BseMI GCAATG 1 cut(s) 687
BseMII CTCAG 4 cut(s) 23, 488, 749, 800
BseNI ACTGG 4 cut(s) 404, 893, 1103, 1185
BseRI GAGGAG 4 cut(s) 558, 820, 998, 1229
BseXI GCAGC 8 cut(s) 125, 196, 352, 398, 658, 704, 952, 961
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 1 cut(s) 246
BshNI GGYRCC 4 cut(s) 430, 579, 656, 1265
BshVI ATCGAT 1 cut(s) 262
BsiHKAI GWGCWC 1 cut(s) 743
BsiHKCI CYCGRG 1 cut(s) 913
BsiSI CCGG 1 cut(s) 428
BslI CCNNNNNNNGG 2 cut(s) 667, 850
BsmAI GTCTC 3 cut(s) 91, 754, 816
BsmBI CGTCTC 1 cut(s) 91
BsmI GAATGC 1 cut(s) 1155
Bso31I GGTCTC 1 cut(s) 754
BsoBI CYCGRG 1 cut(s) 913
Bsp1286I GDGCHC 2 cut(s) 743, 1008
Bsp1407I TGTACA 1 cut(s) 1140
Bsp143I GATC 4 cut(s) 4, 145, 160, 1134
BspACI CCGC 1 cut(s) 246
BspCNI CTCAG 4 cut(s) 24, 489, 750, 799
BspDI ATCGAT 1 cut(s) 262
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 9 cut(s) 311, 432, 581, 658, 769, 792, 1007, 1094, 1267
BspMAI CTGCAG 3 cut(s) 136, 143, 578
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 2 cut(s) 12, 1142
BspT107I GGYRCC 4 cut(s) 430, 579, 656, 1265
BspTI CTTAAG 1 cut(s) 1127
BspTNI GGTCTC 1 cut(s) 754
BsrDI GCAATG 1 cut(s) 687
BsrGI TGTACA 1 cut(s) 1140
BsrI ACTGG 4 cut(s) 404, 893, 1103, 1185
BssECI CCNNGG 4 cut(s) 37, 474, 643, 660
BssMI GATC 4 cut(s) 4, 145, 160, 1134
BssNI GRCGYC 1 cut(s) 46
BssT1I CCWWGG 3 cut(s) 37, 474, 643
Bst2UI CCWGG 2 cut(s) 662, 765
Bst4CI ACNGT 4 cut(s) 205, 223, 563, 1118
Bst6I CTCTTC 2 cut(s) 221, 660
BstACI GRCGYC 1 cut(s) 46
BstAFI CTTAAG 1 cut(s) 1127
BstAPI GCANNNNNTGC 1 cut(s) 955
BstAUI TGTACA 1 cut(s) 1140
BstC8I GCNNGC 7 cut(s) 136, 180, 189, 257, 578, 825, 1197
BstDEI CTNAG 4 cut(s) 32, 497, 758, 786
BstF5I GGATG 1 cut(s) 840
BstFNI CGCG 1 cut(s) 246
BstHHI GCGC 2 cut(s) 105, 184
BstKTI GATC 4 cut(s) 7, 148, 163, 1137
BstMAI GTCTC 3 cut(s) 91, 754, 816
BstMBI GATC 4 cut(s) 4, 145, 160, 1134
BstNI CCWGG 2 cut(s) 662, 765
BstNSI RCATGY 2 cut(s) 1173, 1279
BstSCI CCNGG 2 cut(s) 660, 763
BstSFI CTRYAG 3 cut(s) 132, 139, 574
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 8 cut(s) 125, 196, 352, 398, 658, 704, 952, 961
BstX2I RGATCY 1 cut(s) 1134
BstXI CCANNNNNNTGG 1 cut(s) 590
BstYI RGATCY 1 cut(s) 1134
Bsu15I ATCGAT 1 cut(s) 262
BsuI GTATCC 1 cut(s) 541
BsuTUI ATCGAT 1 cut(s) 262
BtsCI GGATG 1 cut(s) 840
BtsI GCAGTG 3 cut(s) 148, 517, 726
BtsIMutI CAGTG 6 cut(s) 148, 517, 726, 1110, 1123, 1192
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 7 cut(s) 136, 180, 189, 257, 578, 825, 1197
CfoI GCGC 2 cut(s) 105, 184
ClaI ATCGAT 1 cut(s) 262
CseI GACGC 1 cut(s) 35
Csp6I GTAC 3 cut(s) 397, 634, 1141
CviAII CATG 5 cut(s) 677, 820, 871, 1170, 1276
CviQI GTAC 3 cut(s) 397, 634, 1141
DdeI CTNAG 4 cut(s) 32, 497, 758, 786
DpnI GATC 4 cut(s) 6, 147, 162, 1136
DpnII GATC 4 cut(s) 4, 145, 160, 1134
DraI TTTAAA 1 cut(s) 1053
Eam1104I CTCTTC 2 cut(s) 221, 660
EarI CTCTTC 2 cut(s) 221, 660
Eco130I CCWWGG 3 cut(s) 37, 474, 643
Eco24I GRGCYC 1 cut(s) 1008
Eco31I GGTCTC 1 cut(s) 754
Eco88I CYCGRG 1 cut(s) 913
EcoRII CCWGG 2 cut(s) 660, 763
EcoT14I CCWWGG 3 cut(s) 37, 474, 643
EcoT38I GRGCYC 1 cut(s) 1008
ErhI CCWWGG 3 cut(s) 37, 474, 643
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 5 cut(s) 680, 823, 874, 1173, 1279
FalI AAGNNNNNCTT 2 cut(s) 1121, 1153
FatI CATG 5 cut(s) 676, 819, 870, 1169, 1275
FbaI TGATCA 2 cut(s) 145, 160
Fnu4HI GCNGC 8 cut(s) 139, 185, 366, 387, 672, 693, 941, 950
FokI GGATG 1 cut(s) 827
FriOI GRGCYC 1 cut(s) 1008
Fsp4HI GCNGC 8 cut(s) 139, 185, 366, 387, 672, 693, 941, 950
FspBI CTAG 1 cut(s) 15
GlaI GCGC 2 cut(s) 104, 183
GluI GCNGC 8 cut(s) 139, 185, 366, 387, 672, 693, 941, 950
HapII CCGG 1 cut(s) 428
HgaI GACGC 1 cut(s) 35
HhaI GCGC 2 cut(s) 105, 184
Hin1I GRCGYC 1 cut(s) 46
Hin1II CATG 5 cut(s) 680, 823, 874, 1173, 1279
Hin6I GCGC 2 cut(s) 103, 182
HinP1I GCGC 2 cut(s) 103, 182
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HinfI GANTC 5 cut(s) 110, 249, 359, 809, 1205
HpaI GTTAAC 1 cut(s) 82
HpaII CCGG 1 cut(s) 428
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 1 cut(s) 82
Hpy188I TCNGA 4 cut(s) 12, 28, 498, 752
Hpy188III TCNNGA 6 cut(s) 94, 237, 522, 788, 915, 923
Hpy8I GTNNAC 1 cut(s) 82
HpyAV CCTTC 7 cut(s) 36, 322, 498, 848, 1022, 1106, 1185
HpyCH4III ACNGT 4 cut(s) 205, 223, 563, 1118
HpyF3I CTNAG 4 cut(s) 32, 497, 758, 786
Hsp92I GRCGYC 1 cut(s) 46
Hsp92II CATG 5 cut(s) 680, 823, 874, 1173, 1279
HspAI GCGC 2 cut(s) 103, 182
Ksp22I TGATCA 2 cut(s) 145, 160
KspAI GTTAAC 1 cut(s) 82
Kzo9I GATC 4 cut(s) 4, 145, 160, 1134
LmnI GCTCC 3 cut(s) 507, 767, 1011
Lsp1109I GCAGC 8 cut(s) 125, 196, 352, 398, 658, 704, 952, 961
LweI GCATC 3 cut(s) 61, 268, 849
MaeI CTAG 1 cut(s) 15
MaeIII GTNAC 3 cut(s) 721, 923, 1118
MalI GATC 4 cut(s) 6, 147, 162, 1136
MboI GATC 4 cut(s) 4, 145, 160, 1134
MflI RGATCY 1 cut(s) 1134
MhlI GDGCHC 2 cut(s) 743, 1008
MluCI AATT 6 cut(s) 421, 450, 772, 1048, 1237, 1254
MlyI GAGTC 3 cut(s) 258, 818, 1214
MmeI TCCRAC 2 cut(s) 901, 1203
MseI TTAA 4 cut(s) 81, 1052, 1128, 1296
MslI CAYNNNNRTG 4 cut(s) 221, 588, 681, 1274
MspCI CTTAAG 1 cut(s) 1127
MspI CCGG 1 cut(s) 428
MspR9I CCNGG 2 cut(s) 662, 765
Mva1269I GAATGC 1 cut(s) 1155
MvaI CCWGG 2 cut(s) 662, 765
MvnI CGCG 1 cut(s) 246
NdeII GATC 4 cut(s) 4, 145, 160, 1134
NlaIII CATG 5 cut(s) 680, 823, 874, 1173, 1279
NlaIV GGNNCC 9 cut(s) 311, 432, 581, 658, 769, 792, 1007, 1094, 1267
NmuCI GTSAC 3 cut(s) 721, 923, 1118
NspI RCATGY 2 cut(s) 1173, 1279
OliI CACNNNNGTG 1 cut(s) 221
PaeR7I CTCGAG 1 cut(s) 913
PaqCI CACCTGC 1 cut(s) 139
PciI ACATGT 2 cut(s) 1169, 1275
PctI GAATGC 1 cut(s) 1155
PfeI GAWTC 2 cut(s) 110, 359
PkrI GCNGC 8 cut(s) 140, 186, 367, 388, 673, 694, 942, 951
PleI GAGTC 3 cut(s) 257, 817, 1213
PpsI GAGTC 3 cut(s) 257, 817, 1213
PscI ACATGT 2 cut(s) 1169, 1275
Psp6I CCWGG 2 cut(s) 660, 763
PspGI CCWGG 2 cut(s) 660, 763
PspN4I GGNNCC 9 cut(s) 311, 432, 581, 658, 769, 792, 1007, 1094, 1267
PstI CTGCAG 3 cut(s) 136, 143, 578
PsuI RGATCY 1 cut(s) 1134
RsaI GTAC 3 cut(s) 398, 635, 1142
RsaNI GTAC 3 cut(s) 397, 634, 1141
RseI CAYNNNNRTG 4 cut(s) 221, 588, 681, 1274
SaqAI TTAA 4 cut(s) 81, 1052, 1128, 1296
SatI GCNGC 8 cut(s) 139, 185, 366, 387, 672, 693, 941, 950
Sau3AI GATC 4 cut(s) 4, 145, 160, 1134
SbfI CCTGCAGG 1 cut(s) 136
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 3 cut(s) 258, 818, 1214
ScrFI CCNGG 2 cut(s) 662, 765
SdaI CCTGCAGG 1 cut(s) 136
SduI GDGCHC 2 cut(s) 743, 1008
SfaNI GCATC 3 cut(s) 61, 268, 849
SfcI CTRYAG 3 cut(s) 132, 139, 574
Sfr274I CTCGAG 1 cut(s) 913
SlaI CTCGAG 1 cut(s) 913
SmiI ATTTAAAT 1 cut(s) 1053
SmiMI CAYNNNNRTG 4 cut(s) 221, 588, 681, 1274
SmlI CTYRAG 3 cut(s) 736, 913, 1127
SmoI CTYRAG 3 cut(s) 736, 913, 1127
SpeI ACTAGT 1 cut(s) 14
Sse8387I CCTGCAGG 1 cut(s) 136
Sse9I AATT 6 cut(s) 421, 450, 772, 1048, 1237, 1254
SsiI CCGC 1 cut(s) 246
SspI AATATT 2 cut(s) 485, 1026
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 2 cut(s) 660, 763
StyI CCWWGG 3 cut(s) 37, 474, 643
SwaI ATTTAAAT 1 cut(s) 1053
TaaI ACNGT 4 cut(s) 205, 223, 563, 1118
TaqI TCGA 3 cut(s) 262, 914, 1241
TasI AATT 6 cut(s) 421, 450, 772, 1048, 1237, 1254
TatI WGTACW 2 cut(s) 396, 1140
TfiI GAWTC 2 cut(s) 110, 359
Tru1I TTAA 4 cut(s) 81, 1052, 1128, 1296
Tru9I TTAA 4 cut(s) 81, 1052, 1128, 1296
TscAI CASTG 6 cut(s) 148, 517, 726, 1110, 1123, 1192
TseFI GTSAC 3 cut(s) 721, 923, 1118
TseI GCWGC 8 cut(s) 138, 184, 365, 386, 671, 692, 940, 949
Tsp45I GTSAC 3 cut(s) 721, 923, 1118
TspDTI ATGAA 5 cut(s) 294, 366, 462, 476, 1080
TspRI CASTG 6 cut(s) 148, 517, 726, 1110, 1123, 1192
Vha464I CTTAAG 1 cut(s) 1127
XapI RAATTY 1 cut(s) 1048
XceI RCATGY 2 cut(s) 1173, 1279
XhoI CTCGAG 1 cut(s) 913
XspI CTAG 1 cut(s) 15
ZrmI AGTACT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.