Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004539

Physical Location & Seq

Genomic Coordinates Reverse (-)

78677452 .. 78679111

Gene Structure 1660 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021831

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGATCAGCAGCTGATGATGGTGAAGAATGAAGAGACCCCAGCTGGGAGGCGCCGCTTGAGCACCGCTGATCGCGAGGCAAACCAGGCAGCGCGGTGTGTCAAGAGACGCCGAAGAGACCCAGCTGCTGTTGCTGTTGACATTAGCAAGAGTGAGCTGCCTCTACCAGAAAAGCCAGCTGATCCAGCTTCTGCAACTACCACAATGAAGAGAAGCTCAAGGTTTCGCGGCGTTAGCAGACATAGGTGGACTGGCCGATTTGAAGCTCACTTATGGGACAAGCTTTCTTGGAATATAACACAGAAGAAGAAAGGGAAACAAGTCTACCTTGGGGCATATGATGAAGAAGAGTCTGCTGCAAGAGCCTATGATTTAGCTGCACTCAAGTACTGGGGAACCTCAACTTTCACAAACTTCCCGATATCAGACTATGAGAACGAAATTGAGATCATGCAATCTGTAACAAAAGAAGAATACCTGGCCTCTTTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGTGTGTCCAAGTACAGAGGAGTAGCAAGGCACCATCACAATGGTAGATGGGAAGCAAGAATCGGAAGAGTTTTCGGAAACAAGTACCTCTACCTTGGCACTTACAGCACCCAAGAGGAAGCAGCTCGTGCCTATGACATTGCGGCAATTGAGTACAGAGGGATCAATGCTGTGACCAACTTCGACTTGAGCTCTTACATTAGATGGTTAAAGCCAAAAGTAGACAGCACAATAGCCGCTCAAGAACTAGAGACAGTTGCAGAGCCTGAGAATATGCCATTCATGGCCAGCAACTACATCCCAACAGAGGAATCCCCCTTGTCACACACAAACCCTTTTGCCTCTGACTACTTGAACTCACCAAAGCAAGAAGTGTCCAGGAGCAACGTCCCTCTCGACTCAAGCAGCAAGTCATCCTCTCCAACCGCACTTGGCCTCCTCCTTCAGTCTTCTATATTCAGAGAACTGGTTCAGAAGAACTCGAATTACTCGGAGGATGAAAGCACCGATGGAGAAGAACAAAAGAACCAAGCACAAGGTGGGAGTGACGACGAGTATGGTGGACCTTTTTCATATGACCGAATTGGGGCCAATAGCCCGTTTGTTTCCTCTACCAACAGGGAAAGCATAGAACTGCAAGAAAGAGAGCTCCTTCACTCCCCATGGAACAGCTTCGCAAGCACGATGCTGCTTAATCAAACAACAAAAGCAGATGCCTCAGAGTCTCTGTTCTTCTTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006109 GO:0006110 GO:0006140 GO:0006355 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009743 GO:0009744 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019220 GO:0019222 GO:0019432 GO:0030808 GO:0030811 GO:0031323 GO:0031326 GO:0031329 GO:0034285 GO:0042221 GO:0042325 GO:0043467 GO:0043470 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0048518 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051193 GO:0051196 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1900371 GO:1900542 GO:1901363 GO:1901576 GO:1901700 GO:1901957 GO:1901959 GO:1903506 GO:1903578 GO:2000112 GO:2001141 GO:2001169

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

420

Amino Acids

47.33

Weight (kDa)

6.44

Isoelectric Point (pI)

63.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	73 - 132	2.7e-12	AP2 domain
AP2	PF00847	175 - 226	2.2e-11	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004539)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g31880 FvH4_6g49200
malus_domestica	MD09G1047600.v1.1 MD09G1047800.v1.1 MD13G1078300.v1.1 MD17G1047900.v1.1
prunus_persica	Prupe.1G268800_v2.0.a1 Prupe.3G271200_v2.0.a1 Prupe.3G271400_v2.0.a1
pyrus_communis	pycom17g04250 pycom17g04270
rosa_chinensis	RchiOBHm_Chr2g0169071 RchiOBHm_Chr4g0440541
rosa_laevigata	RLG00000006169 RLG00000021831
rosa_multiflora	Rmu_co8472159.1_g000001 Rmu_sc0016635.1_g000002 Rmu_sc0037701.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082490 Rroxscaffold_3G00226840 Rroxscaffold_5G00381370
rosa_rugosa	Rorug02G0536600 Rorug04G0326600
rosa_samantha	Rh2AG608500 Rh2BG621300 Rh2CG590100 Rh2DG632000 Rh4CG405600 Rh4DG384600
rosa_wichuraiana	Rw2G050450 Rw4G032380 Rw4G032480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	51, 546
AccBSI	CCGCTC	1 cut(s)	755
AccI	GTMKAC	2 cut(s)	324, 738
AccII	CGCG	3 cut(s)	75, 94, 228
AciI	CCGC	7 cut(s)	55, 66, 94, 228, 659, 753, 942
AclWI	GGATC	3 cut(s)	12, 176, 686
AcoI	YGGCCR	2 cut(s)	253, 801
AcuI	CTGAAG	1 cut(s)	944
AcyI	GRCGYC	2 cut(s)	52, 109
AdeI	CACNNNGTG	1 cut(s)	1055
AfaI	GTAC	4 cut(s)	389, 530, 602, 671
AfiI	CCNNNNNNNGG	3 cut(s)	45, 823, 1102
AgsI	TTSAA	3 cut(s)	263, 513, 871
AjnI	CCWGG	3 cut(s)	84, 477, 893
Alw21I	GWGCWC	3 cut(s)	65, 710, 1167
Alw26I	GTCTC	5 cut(s)	29, 100, 111, 761, 1245
AlwI	GGATC	3 cut(s)	12, 176, 686
AlwNI	CAGNNNCTG	4 cut(s)	13, 128, 191, 782
AoxI	GGCC	5 cut(s)	253, 480, 801, 949, 1104
ApeKI	GCWGC	9 cut(s)	10, 89, 125, 157, 356, 377, 638, 921, 1204
Asp700I	GAANNNNTTC	2 cut(s)	984, 1187
AspLEI	GCGC	2 cut(s)	54, 94
AspS9I	GGNCC	2 cut(s)	1079, 1104
AsuHPI	GGTGA	2 cut(s)	34, 867
AvaII	GGWCC	1 cut(s)	1079
BalI	TGGCCA	1 cut(s)	803
BanI	GGYRCC	2 cut(s)	51, 546
BanII	GRGCYC	2 cut(s)	710, 1167
BauI	CACGAG	1 cut(s)	642
BbsI	GAAGAC	1 cut(s)	957
Bbv12I	GWGCWC	3 cut(s)	65, 710, 1167
BbvI	GCAGC	9 cut(s)	22, 101, 112, 144, 343, 364, 650, 933, 1191
BccI	CCATC	5 cut(s)	13, 558, 558, 714, 1019
BciT130I	CCWGG	3 cut(s)	86, 479, 895
BcoDI	GTCTC	5 cut(s)	29, 100, 111, 761, 1245
BfaI	CTAG	1 cut(s)	764
BfoI	RGCGCY	1 cut(s)	55
BmcAI	AGTACT	1 cut(s)	389
Bme1390I	CCNGG	3 cut(s)	86, 479, 895
Bme18I	GGWCC	1 cut(s)	1079
BmgT120I	GGNCC	2 cut(s)	1079, 1104
BmiI	GGNNCC	4 cut(s)	53, 397, 548, 1105
BmrFI	CCNGG	3 cut(s)	86, 479, 895
BmrI	ACTGGG	1 cut(s)	400
BmsI	GCATC	2 cut(s)	1191, 1219
BmuI	ACTGGG	1 cut(s)	400
BpiI	GAAGAC	1 cut(s)	957
BpuEI	CTTGAG	6 cut(s)	79, 202, 368, 724, 741, 901
BsaHI	GRCGYC	2 cut(s)	52, 109
BsaI	GGTCTC	2 cut(s)	29, 111
BsaJI	CCNNGG	3 cut(s)	328, 610, 1178
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	3 cut(s)	45, 823, 1102
Bse1I	ACTGG	3 cut(s)	256, 395, 987
Bse3DI	GCAATG	1 cut(s)	654
BseBI	CCWGG	3 cut(s)	86, 479, 895
BseDI	CCNNGG	3 cut(s)	328, 610, 1178
BseGI	GGATG	3 cut(s)	813, 929, 1018
BseLI	CCNNNNNNNGG	3 cut(s)	45, 823, 1102
BseMI	GCAATG	1 cut(s)	654
BseMII	CTCAG	2 cut(s)	774, 1248
BseNI	ACTGG	3 cut(s)	256, 395, 987
BseRI	GAGGAG	2 cut(s)	549, 944
BseXI	GCAGC	9 cut(s)	22, 101, 112, 144, 343, 364, 650, 933, 1191
BseYI	CCCAGC	3 cut(s)	40, 44, 121
BsgI	GTGCAG	1 cut(s)	363
Bsh1236I	CGCG	3 cut(s)	75, 94, 228
BshFI	GGCC	5 cut(s)	255, 482, 803, 951, 1106
BshNI	GGYRCC	2 cut(s)	51, 546
BsiHKAI	GWGCWC	3 cut(s)	65, 710, 1167
BslFI	GGGAC	2 cut(s)	290, 890
BslI	CCNNNNNNNGG	3 cut(s)	45, 823, 1102
BsmAI	GTCTC	5 cut(s)	29, 100, 111, 761, 1245
BsmBI	CGTCTC	1 cut(s)	100
BsmFI	GGGAC	2 cut(s)	290, 890
BsnI	GGCC	5 cut(s)	255, 482, 803, 951, 1106
Bso31I	GGTCTC	2 cut(s)	29, 111
Bsp1286I	GDGCHC	3 cut(s)	65, 710, 1167
Bsp143I	GATC	5 cut(s)	4, 70, 181, 447, 678
Bsp19I	CCATGG	1 cut(s)	1178
Bsp68I	TCGCGA	1 cut(s)	75
BspACI	CCGC	7 cut(s)	55, 66, 94, 228, 659, 753, 942
BspANI	GGCC	5 cut(s)	255, 482, 803, 951, 1106
BspCNI	CTCAG	2 cut(s)	775, 1247
BspFNI	CGCG	3 cut(s)	75, 94, 228
BspLI	GGNNCC	4 cut(s)	53, 397, 548, 1105
BspPI	GGATC	3 cut(s)	12, 176, 686
BspT107I	GGYRCC	2 cut(s)	51, 546
BspTNI	GGTCTC	2 cut(s)	29, 111
BsrBI	CCGCTC	1 cut(s)	755
BsrDI	GCAATG	1 cut(s)	654
BsrI	ACTGG	3 cut(s)	256, 395, 987
BssECI	CCNNGG	3 cut(s)	328, 610, 1178
BssMI	GATC	5 cut(s)	4, 70, 181, 447, 678
BssNI	GRCGYC	2 cut(s)	52, 109
BssSI	CACGAG	1 cut(s)	642
BssT1I	CCWWGG	3 cut(s)	328, 610, 1178
Bst2BI	CACGAG	1 cut(s)	642
Bst2UI	CCWGG	3 cut(s)	86, 479, 895
Bst4CI	ACNGT	1 cut(s)	772
Bst6I	CTCTTC	5 cut(s)	27, 109, 203, 342, 577
BstACI	GRCGYC	2 cut(s)	52, 109
BstAPI	GCANNNNNTGC	1 cut(s)	644
BstC8I	GCNNGC	3 cut(s)	177, 805, 1195
BstDEI	CTNAG	3 cut(s)	783, 1234, 1257
BstDSI	CCRYGG	1 cut(s)	1178
BstF5I	GGATG	3 cut(s)	813, 929, 1018
BstFNI	CGCG	3 cut(s)	75, 94, 228
BstH2I	RGCGCY	1 cut(s)	55
BstHHI	GCGC	2 cut(s)	54, 94
BstKTI	GATC	5 cut(s)	7, 73, 184, 450, 681
BstMAI	GTCTC	5 cut(s)	29, 100, 111, 761, 1245
BstMBI	GATC	5 cut(s)	4, 70, 181, 447, 678
BstMWI	GCNNNNNNNGC	9 cut(s)	60, 86, 131, 185, 234, 362, 621, 644, 1194
BstNI	CCWGG	3 cut(s)	86, 479, 895
BstSCI	CCNGG	3 cut(s)	84, 477, 893
BstUI	CGCG	3 cut(s)	75, 94, 228
BstV1I	GCAGC	9 cut(s)	22, 101, 112, 144, 343, 364, 650, 933, 1191
BstV2I	GAAGAC	1 cut(s)	957
BstXI	CCANNNNNNTGG	1 cut(s)	557
BsuRI	GGCC	5 cut(s)	255, 482, 803, 951, 1106
BtgI	CCRYGG	1 cut(s)	1178
BtsCI	GGATG	3 cut(s)	813, 929, 1018
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	1 cut(s)	508
BtuMI	TCGCGA	1 cut(s)	75
Cac8I	GCNNGC	3 cut(s)	177, 805, 1195
CaiI	CAGNNNCTG	4 cut(s)	13, 128, 191, 782
CfoI	GCGC	2 cut(s)	54, 94
Cfr13I	GGNCC	2 cut(s)	1079, 1104
CseI	GACGC	1 cut(s)	117
Csp6I	GTAC	4 cut(s)	388, 529, 601, 670
CviAII	CATG	3 cut(s)	451, 799, 1179
CviQI	GTAC	4 cut(s)	388, 529, 601, 670
DdeI	CTNAG	3 cut(s)	783, 1234, 1257
DinI	GGCGCC	1 cut(s)	53
DpnI	GATC	5 cut(s)	6, 72, 183, 449, 680
DpnII	GATC	5 cut(s)	4, 70, 181, 447, 678
DraIII	CACNNNGTG	1 cut(s)	1055
EaeI	YGGCCR	2 cut(s)	253, 801
Eam1104I	CTCTTC	5 cut(s)	27, 109, 203, 342, 577
EarI	CTCTTC	5 cut(s)	27, 109, 203, 342, 577
Ecl136II	GAGCTC	2 cut(s)	708, 1165
Eco130I	CCWWGG	3 cut(s)	328, 610, 1178
Eco24I	GRGCYC	2 cut(s)	710, 1167
Eco31I	GGTCTC	2 cut(s)	29, 111
Eco32I	GATATC	1 cut(s)	423
Eco47I	GGWCC	1 cut(s)	1079
Eco53kI	GAGCTC	2 cut(s)	708, 1165
Eco57I	CTGAAG	1 cut(s)	944
EcoICRI	GAGCTC	2 cut(s)	708, 1165
EcoRII	CCWGG	3 cut(s)	84, 477, 893
EcoRV	GATATC	1 cut(s)	423
EcoT14I	CCWWGG	3 cut(s)	328, 610, 1178
EcoT38I	GRGCYC	2 cut(s)	710, 1167
EgeI	GGCGCC	1 cut(s)	53
EheI	GGCGCC	1 cut(s)	53
ErhI	CCWWGG	3 cut(s)	328, 610, 1178
Esp3I	CGTCTC	1 cut(s)	100
FaeI	CATG	3 cut(s)	454, 802, 1182
FalI	AAGNNNNNCTT	2 cut(s)	312, 344
FaqI	GGGAC	2 cut(s)	290, 890
FatI	CATG	3 cut(s)	450, 798, 1178
FauNDI	CATATG	2 cut(s)	337, 1090
FblI	GTMKAC	2 cut(s)	324, 738
FokI	GGATG	3 cut(s)	800, 916, 1025
FriOI	GRGCYC	2 cut(s)	710, 1167
FspBI	CTAG	1 cut(s)	764
GlaI	GCGC	2 cut(s)	53, 93
GsaI	CCCAGC	3 cut(s)	44, 48, 125
HaeII	RGCGCY	1 cut(s)	55
HaeIII	GGCC	5 cut(s)	255, 482, 803, 951, 1106
HgaI	GACGC	1 cut(s)	117
HhaI	GCGC	2 cut(s)	54, 94
Hin1I	GRCGYC	2 cut(s)	52, 109
Hin1II	CATG	3 cut(s)	454, 802, 1182
Hin6I	GCGC	2 cut(s)	52, 92
HinP1I	GCGC	2 cut(s)	52, 92
HincII	GTYRAC	1 cut(s)	139
HindII	GTYRAC	1 cut(s)	139
HindIII	AAGCTT	1 cut(s)	281
HinfI	GANTC	5 cut(s)	350, 576, 827, 914, 1238
HphI	GGTGA	2 cut(s)	34, 867
Hpy166II	GTNNAC	5 cut(s)	139, 249, 325, 739, 1079
Hpy188I	TCNGA	8 cut(s)	427, 581, 593, 862, 977, 990, 1009, 1237
Hpy188III	TCNNGA	6 cut(s)	74, 103, 418, 513, 758, 911
Hpy8I	GTNNAC	5 cut(s)	139, 249, 325, 739, 1079
Hpy99I	CGWCG	1 cut(s)	1070
HpyAV	CCTTC	2 cut(s)	968, 1178
HpyCH4III	ACNGT	1 cut(s)	772
HpyCH4IV	ACGT	1 cut(s)	903
HpyCH4V	TGCA	6 cut(s)	194, 359, 380, 454, 776, 1153
HpyF10VI	GCNNNNNNNGC	9 cut(s)	60, 86, 131, 185, 234, 362, 621, 644, 1194
HpyF3I	CTNAG	3 cut(s)	783, 1234, 1257
HpySE526I	ACGT	1 cut(s)	903
Hsp92I	GRCGYC	2 cut(s)	52, 109
Hsp92II	CATG	3 cut(s)	454, 802, 1182
HspAI	GCGC	2 cut(s)	52, 92
KasI	GGCGCC	1 cut(s)	51
Kzo9I	GATC	5 cut(s)	4, 70, 181, 447, 678
LmnI	GCTCC	2 cut(s)	897, 1170
Lsp1109I	GCAGC	9 cut(s)	22, 101, 112, 144, 343, 364, 650, 933, 1191
LweI	GCATC	2 cut(s)	1191, 1219
MaeI	CTAG	1 cut(s)	764
MaeII	ACGT	1 cut(s)	903
MaeIII	GTNAC	4 cut(s)	460, 688, 837, 1061
MalI	GATC	5 cut(s)	6, 72, 183, 449, 680
MbiI	CCGCTC	1 cut(s)	755
MboI	GATC	5 cut(s)	4, 70, 181, 447, 678
MfeI	CAATTG	1 cut(s)	663
MhlI	GDGCHC	3 cut(s)	65, 710, 1167
MlsI	TGGCCA	1 cut(s)	803
MluCI	AATT	4 cut(s)	441, 663, 1000, 1098
MluNI	TGGCCA	1 cut(s)	803
Mly113I	GGCGCC	1 cut(s)	52
MlyI	GAGTC	3 cut(s)	359, 908, 1247
MmeI	TCCRAC	1 cut(s)	962
Mox20I	TGGCCA	1 cut(s)	803
MroXI	GAANNNNTTC	2 cut(s)	984, 1187
MscI	TGGCCA	1 cut(s)	803
MseI	TTAA	3 cut(s)	488, 725, 1209
MslI	CAYNNNNRTG	1 cut(s)	555
Msp20I	TGGCCA	1 cut(s)	803
MspA1I	CMGCKG	5 cut(s)	13, 44, 68, 125, 179
MspR9I	CCNGG	3 cut(s)	86, 479, 895
MunI	CAATTG	1 cut(s)	663
MvaI	CCWGG	3 cut(s)	86, 479, 895
MvnI	CGCG	3 cut(s)	75, 94, 228
MwoI	GCNNNNNNNGC	9 cut(s)	60, 86, 131, 185, 234, 362, 621, 644, 1194
NarI	GGCGCC	1 cut(s)	52
NcoI	CCATGG	1 cut(s)	1178
NdeI	CATATG	2 cut(s)	337, 1090
NdeII	GATC	5 cut(s)	4, 70, 181, 447, 678
NlaIII	CATG	3 cut(s)	454, 802, 1182
NlaIV	GGNNCC	4 cut(s)	53, 397, 548, 1105
NmuCI	GTSAC	3 cut(s)	688, 837, 1061
NruI	TCGCGA	1 cut(s)	75
PcsI	WCGNNNNNNNCGW	1 cut(s)	909
PdmI	GAANNNNTTC	2 cut(s)	984, 1187
PfeI	GAWTC	2 cut(s)	576, 827
PfoI	TCCNGGA	1 cut(s)	893
PleI	GAGTC	3 cut(s)	358, 908, 1246
PluTI	GGCGCC	1 cut(s)	55
PpsI	GAGTC	3 cut(s)	358, 908, 1246
Psp124BI	GAGCTC	2 cut(s)	710, 1167
Psp6I	CCWGG	3 cut(s)	84, 477, 893
PspFI	CCCAGC	3 cut(s)	40, 44, 121
PspGI	CCWGG	3 cut(s)	84, 477, 893
PspN4I	GGNNCC	4 cut(s)	53, 397, 548, 1105
PspPI	GGNCC	2 cut(s)	1079, 1104
PsrI	GAACNNNNNNTAC	2 cut(s)	986, 1018
PstNI	CAGNNNCTG	4 cut(s)	13, 128, 191, 782
PvuII	CAGCTG	4 cut(s)	13, 44, 125, 179
RruI	TCGCGA	1 cut(s)	75
RsaI	GTAC	4 cut(s)	389, 530, 602, 671
RsaNI	GTAC	4 cut(s)	388, 529, 601, 670
RseI	CAYNNNNRTG	1 cut(s)	555
SacI	GAGCTC	2 cut(s)	710, 1167
SaqAI	TTAA	3 cut(s)	488, 725, 1209
Sau3AI	GATC	5 cut(s)	4, 70, 181, 447, 678
Sau96I	GGNCC	2 cut(s)	1079, 1104
ScaI	AGTACT	1 cut(s)	389
SchI	GAGTC	3 cut(s)	359, 908, 1247
ScrFI	CCNGG	3 cut(s)	86, 479, 895
SduI	GDGCHC	3 cut(s)	65, 710, 1167
SfaNI	GCATC	2 cut(s)	1191, 1219
SfoI	GGCGCC	1 cut(s)	53
SinI	GGWCC	1 cut(s)	1079
SmiMI	CAYNNNNRTG	1 cut(s)	555
SmlI	CTYRAG	6 cut(s)	58, 217, 383, 703, 756, 916
SmoI	CTYRAG	6 cut(s)	58, 217, 383, 703, 756, 916
Sse9I	AATT	4 cut(s)	441, 663, 1000, 1098
SsiI	CCGC	7 cut(s)	55, 66, 94, 228, 659, 753, 942
SspDI	GGCGCC	1 cut(s)	51
SspMI	CTAG	1 cut(s)	764
SstI	GAGCTC	2 cut(s)	710, 1167
StyD4I	CCNGG	3 cut(s)	84, 477, 893
StyI	CCWWGG	3 cut(s)	328, 610, 1178
TaaI	ACNGT	1 cut(s)	772
TaiI	ACGT	1 cut(s)	906
TaqI	TCGA	3 cut(s)	699, 912, 998
TaqII	GACCGA	1 cut(s)	1110
TasI	AATT	4 cut(s)	441, 663, 1000, 1098
TatI	WGTACW	3 cut(s)	387, 528, 669
TauI	GCSGC	4 cut(s)	57, 231, 662, 755
TfiI	GAWTC	2 cut(s)	576, 827
Tru1I	TTAA	3 cut(s)	488, 725, 1209
Tru9I	TTAA	3 cut(s)	488, 725, 1209
TscAI	CASTG	1 cut(s)	508
TseFI	GTSAC	3 cut(s)	688, 837, 1061
TseI	GCWGC	9 cut(s)	10, 89, 125, 157, 356, 377, 638, 921, 1204
Tsp45I	GTSAC	3 cut(s)	688, 837, 1061
TspDTI	ATGAA	6 cut(s)	45, 221, 357, 787, 1029, 1077
TspRI	CASTG	1 cut(s)	508
VpaK11BI	GGWCC	1 cut(s)	1079
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1052
XmiI	GTMKAC	2 cut(s)	324, 738
XmnI	GAANNNNTTC	2 cut(s)	984, 1187
XspI	CTAG	1 cut(s)	764
ZrmI	AGTACT	1 cut(s)	389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.