Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002377

Physical Location & Seq

Genomic Coordinates Reverse (-)

2605251 .. 2608426

Gene Structure 3176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1036200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGTGAGTGGTGGCGGTGACAGAATGGCACTGCCGTCTCATCAGCCTCCAAACGGTGGCGTTTCACAGGATTCCGGCCACGCCCGCCTCCACGAACTCGGCTACAAGCAAGAGCTCAAGCGTGACCTCTCGCTGCTTTCAAATTTTGCGTTTTCGTTTTCCATCATATCGGTGCTCACCGGAGTGACCACTCTGTATAATACTGGGCTGAGATACGGCGGCCCTGTGTCTTTCGTTTATGGGTGGTTTATAACGGGTGTCTTCACCGTCTTCGTTGGGTTGTCAATGGGGGAGATTTGCTCCTCGTACCCAACTTCTGGGGGGCTGTACTACTGGAGTGCCAAGCTTGCTGGCCCCAAATGGGCACCCTTTGCTTCTTGGCTCACTGGCTGGTTCAACATAGTTGGTCAGTGGGCAGTTACAACTAGCGTGGATTTCTCACTTGCACAGCTGATTAACGTGATCGTTCTCCTTAGCACACGTGGAGGGAATGGTGGTGATGGCACTTCGATAAATAAGTACGGAACCATTGGTATCCATGCAGGAATCTTGTTTCTACATGCTCTTATAAACAGTCTGCCCATCTCGTACTTATCTTTGTTTGGACAAGTCGCTGCTGCGTGGAATGTTGCAGGTGTCTTTCTCCTCATGATTCTCATACCCTGTGTTGCAACGGAGAGGGCTAGTGCGAAGTTTGTATTCACTCACTTCAACACTGATAACGGGGAGGGAATCAGCAACAAATTTCACATTTTTGTTCTGGGACTTCTGTTGAGTCAATATACCATAACTGGCTATGATGCTTCTGCCCATATGACAGAGGAAACAAAGAACGCTGATACGAATGGACCAAAAGGAATAATTAGTTCCATCGTGATATCCATTATCGTTGGATGGGGTTATATACTCGGCATCACCTTTGCAGTTACTAACATCCCGTACCTTTTGGATGAGAACAATGAAGCTGGCGGTTATGCCATTGCTGAAATATTTTACCTTGCATTCAAGAGTAGATACGGCAGTGGAGTTGGAGGAATTGTATGCTTGGGAGTGGTTGCGGTTGCCATATTCTTCTGTGGTATGAGTTCAGTTACTAGCAACTCCAGGATGGTGTATGCATTCTCTAGAGATGGAGCCATGCCATTATCACCATTTTGGCATAAAGTGAACAAACACGAAGTCCCCGTAAACGCTGTTTGGCTTTCTGCTTTCATATCGTTTTGCATGGCACTAACATCTCTCGGAAGCCTTGTGGCATTCAATGCCATGGTTTCTATAGCAACCATTGGACTGTACATTGCTTATGCCCTACCCATCTTTTTTAGGGTGACCATGGCACGCAAATCCTTTGTCCCGGGACCTTTCAACTTGGGACGCTACGGGGTCCTTGTTGGTTGGATTTCAGTTCTTTGGGTAGCAACTATCTCTGTCCTCTTCTCGTTGCCCGTGGCCTATCCAATTACCATCGAGACACTCAACTATACTCCCGTTGCTGTTGGCGGTTTGCTGATCATCACAGTTTTAGCTTGGATCCTGAGCGCTCGGCACTGGTTTAAAGGTCCTATAACGAACATAGAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005310 GO:0005313 GO:0005326 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006835 GO:0006836 GO:0006855 GO:0006865 GO:0008028 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015172 GO:0015174 GO:0015175 GO:0015179 GO:0015180 GO:0015181 GO:0015185 GO:0015189 GO:0015238 GO:0015291 GO:0015297 GO:0015318 GO:0015711 GO:0015718 GO:0015800 GO:0015802 GO:0015804 GO:0015807 GO:0015808 GO:0015809 GO:0015812 GO:0015813 GO:0015849 GO:0015893 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0022858 GO:0031224 GO:0031226 GO:0032328 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098655 GO:0098656 GO:1902022 GO:1902475 GO:1903401 GO:1903825 GO:1903826 GO:1905039 GO:1990822

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AA_permease_2

Protein Analysis

528

Amino Acids

56.73

Weight (kDa)

8.64

Isoelectric Point (pI)

29.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	43 - 500	2e-57	Amino acid permease
AA_permease	PF00324	61 - 498	2e-30	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01170 AT2G01170
fragaria_vesca	FvH4_4g26580 FvH4_4g26581
malus_domestica	MD00G1162100.v1.1 MD16G1036200.v1.1 MD16G1036300.v1.1
prunus_persica	Prupe.1G317800_v2.0.a1 Prupe.1G317800_v2.0.a1 Prupe.1G317800_v2.0.a1 Prupe.1G317800_v2.0.a1 Prupe.1G317800_v2.0.a1
pyrus_communis	pycom16g03100 pycom16g03110
rosa_chinensis	RchiOBHm_Chr1g0351381 RchiOBHm_Chr4g0434221 RchiOBHm_Chr4g0434231 RchiOBHm_Chr7g0202541 RchiOBHm_Chr7g0243741
rosa_laevigata	RLG00000006690
rosa_multiflora	Rmu_sc0000459.1_g000012
rosa_roxburghii	Rroxscaffold_5G00375610 Rroxscaffold_5G00375620
rosa_rugosa	Rorug02G0460400 Rorug04G0275500 Rorug04G0275500 Rorug04G0275500 Rorug04G0275500 Rorug04G0275600
rosa_samantha	Rh1AG013600 Rh1BG005200 Rh1BG065300 Rh4AG330300 Rh4AG330400 Rh4BG247000 Rh4BG337900 Rh4CG353300 Rh4DG333900 Rh4DG334000 Rh7AG476100
rosa_wichuraiana	Rw4G028650 Rw4G028660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	251, 569
AarI	CACCTGC	1 cut(s)	623
Acc36I	ACCTGC	1 cut(s)	623
AccB1I	GGYRCC	1 cut(s)	364
AccB7I	CCANNNNNTGG	2 cut(s)	56, 317
AciI	CCGC	6 cut(s)	15, 85, 219, 969, 1058, 1500
AclWI	GGATC	2 cut(s)	1525, 1538
AcoI	YGGCCR	1 cut(s)	76
AcsI	RAATTY	2 cut(s)	142, 743
AcvI	CACGTG	1 cut(s)	482
AfaI	GTAC	6 cut(s)	308, 329, 521, 590, 941, 1295
AfeI	AGCGCT	1 cut(s)	1540
AfiI	CCNNNNNNNGG	4 cut(s)	53, 56, 317, 361
AflIII	ACRYGT	1 cut(s)	479
AgsI	TTSAA	6 cut(s)	141, 397, 712, 1006, 1261, 1366
AjnI	CCWGG	1 cut(s)	1103
AleI	CACNNNNGTG	1 cut(s)	182
AluBI	AGCT	5 cut(s)	115, 346, 451, 965, 1526
AluI	AGCT	5 cut(s)	115, 346, 451, 965, 1526
Alw21I	GWGCWC	2 cut(s)	117, 177
Alw26I	GTCTC	2 cut(s)	42, 1463
AlwI	GGATC	2 cut(s)	1525, 1538
Ama87I	CYCGRG	1 cut(s)	1354
Aor51HI	AGCGCT	1 cut(s)	1540
AoxI	GGCC	4 cut(s)	76, 220, 352, 1449
ApeKI	GCWGC	3 cut(s)	133, 614, 617
ApoI	RAATTY	2 cut(s)	142, 743
ArsI	GACNNNNNNTTYG	4 cut(s)	1164, 1196, 1335, 1367
AspLEI	GCGC	1 cut(s)	1541
AspS9I	GGNCC	6 cut(s)	221, 353, 848, 1358, 1384, 1559
AsuC2I	CCSGG	2 cut(s)	1355, 1356
AsuHPI	GGTGA	8 cut(s)	16, 29, 169, 256, 509, 907, 1140, 1339
AvaI	CYCGRG	1 cut(s)	1354
AvaII	GGWCC	4 cut(s)	848, 1358, 1384, 1559
BaeGI	GKGCMC	1 cut(s)	367
BaeI	ACNNNNGTAYC	2 cut(s)	1006, 1039
BamHI	GGATCC	1 cut(s)	1530
BanI	GGYRCC	1 cut(s)	364
BanII	GRGCYC	1 cut(s)	117
BbrPI	CACGTG	1 cut(s)	482
BbsI	GAAGAC	2 cut(s)	253, 262
Bbv12I	GWGCWC	2 cut(s)	117, 177
BbvI	GCAGC	3 cut(s)	120, 601, 604
BccI	CCATC	9 cut(s)	170, 494, 590, 878, 888, 1102, 1124, 1322, 1472
BceAI	ACGGC	3 cut(s)	19, 232, 1033
BciT130I	CCWGG	1 cut(s)	1105
BciVI	GTATCC	1 cut(s)	545
BclI	TGATCA	1 cut(s)	1509
BcnI	CCSGG	2 cut(s)	1355, 1356
BcoDI	GTCTC	2 cut(s)	42, 1463
BfaI	CTAG	4 cut(s)	426, 684, 1095, 1125
BfmI	CTRYAG	1 cut(s)	1275
BfoI	RGCGCY	1 cut(s)	1542
BfuAI	ACCTGC	1 cut(s)	623
BfuI	GTATCC	1 cut(s)	545
BisI	GCNGC	4 cut(s)	134, 220, 615, 618
BlsI	GCNGC	4 cut(s)	135, 221, 616, 619
Bme1390I	CCNGG	3 cut(s)	1105, 1355, 1356
Bme18I	GGWCC	4 cut(s)	848, 1358, 1384, 1559
BmeT110I	CYCGRG	1 cut(s)	1354
BmgT120I	GGNCC	6 cut(s)	221, 353, 848, 1358, 1384, 1559
BmiI	GGNNCC	7 cut(s)	355, 366, 526, 1135, 1359, 1385, 1532
BmrFI	CCNGG	3 cut(s)	1105, 1355, 1356
BmrI	ACTGGG	1 cut(s)	213
BmsI	GCATC	2 cut(s)	790, 921
BmuI	ACTGGG	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	253, 262
BplI	GAGNNNNNCTC	2 cut(s)	284, 316
BpmI	CTGGAG	2 cut(s)	355, 1087
Bpu10I	CCTNAGC	2 cut(s)	473, 1535
BpuEI	CTTGAG	1 cut(s)	101
BpuMI	CCSGG	2 cut(s)	1355, 1356
BsaAI	YACGTR	1 cut(s)	482
BsaJI	CCNNGG	4 cut(s)	1266, 1332, 1354, 1446
BsaWI	WCCGGW	1 cut(s)	179
BsaXI	ACNNNNNCTCC	2 cut(s)	1023, 1053
Bsc4I	CCNNNNNNNGG	4 cut(s)	53, 56, 317, 361
Bse1I	ACTGG	5 cut(s)	208, 338, 391, 796, 1553
Bse3DI	GCAATG	2 cut(s)	978, 1296
BseBI	CCWGG	1 cut(s)	1105
BseDI	CCNNGG	4 cut(s)	1266, 1332, 1354, 1446
BseGI	GGATG	4 cut(s)	899, 933, 955, 1113
BseLI	CCNNNNNNNGG	4 cut(s)	53, 56, 317, 361
BseMI	GCAATG	2 cut(s)	978, 1296
BseMII	CTCAG	2 cut(s)	200, 1526
BseNI	ACTGG	5 cut(s)	208, 338, 391, 796, 1553
BseRI	GAGGAG	2 cut(s)	292, 635
BseSI	GKGCMC	1 cut(s)	367
BseXI	GCAGC	3 cut(s)	120, 601, 604
BshFI	GGCC	4 cut(s)	78, 222, 354, 1451
BshNI	GGYRCC	1 cut(s)	364
BsiHKAI	GWGCWC	2 cut(s)	117, 177
BsiHKCI	CYCGRG	1 cut(s)	1354
BsiSI	CCGG	3 cut(s)	75, 180, 1355
BslFI	GGGAC	5 cut(s)	777, 1166, 1337, 1371, 1386
BslI	CCNNNNNNNGG	4 cut(s)	53, 56, 317, 361
BsmAI	GTCTC	2 cut(s)	42, 1463
BsmBI	CGTCTC	1 cut(s)	42
BsmFI	GGGAC	5 cut(s)	777, 1166, 1337, 1371, 1386
BsmI	GAATGC	3 cut(s)	1001, 1118, 1256
BsnI	GGCC	4 cut(s)	78, 222, 354, 1451
BsoBI	CYCGRG	1 cut(s)	1354
Bsp1286I	GDGCHC	3 cut(s)	117, 177, 367
Bsp1407I	TGTACA	1 cut(s)	1293
Bsp143I	GATC	3 cut(s)	462, 1509, 1530
Bsp19I	CCATGG	2 cut(s)	1266, 1332
BspACI	CCGC	6 cut(s)	15, 85, 219, 969, 1058, 1500
BspANI	GGCC	4 cut(s)	78, 222, 354, 1451
BspCNI	CTCAG	2 cut(s)	201, 1527
BspHI	TCATGA	1 cut(s)	648
BspLI	GGNNCC	7 cut(s)	355, 366, 526, 1135, 1359, 1385, 1532
BspMI	ACCTGC	1 cut(s)	623
BspPI	GGATC	2 cut(s)	1525, 1538
BspT107I	GGYRCC	1 cut(s)	364
BsrDI	GCAATG	2 cut(s)	978, 1296
BsrGI	TGTACA	1 cut(s)	1293
BsrI	ACTGG	5 cut(s)	208, 338, 391, 796, 1553
BssECI	CCNNGG	4 cut(s)	1266, 1332, 1354, 1446
BssMI	GATC	3 cut(s)	462, 1509, 1530
BssT1I	CCWWGG	2 cut(s)	1266, 1332
Bst2UI	CCWGG	1 cut(s)	1105
Bst4CI	ACNGT	5 cut(s)	56, 268, 575, 1293, 1519
Bst6I	CTCTTC	1 cut(s)	1439
BstAPI	GCANNNNNTGC	2 cut(s)	371, 1262
BstAUI	TGTACA	1 cut(s)	1293
BstBAI	YACGTR	1 cut(s)	482
BstC8I	GCNNGC	5 cut(s)	85, 348, 352, 967, 1339
BstDEI	CTNAG	3 cut(s)	209, 473, 1535
BstDSI	CCRYGG	3 cut(s)	1266, 1332, 1446
BstEII	GGTNACC	1 cut(s)	1327
BstF5I	GGATG	4 cut(s)	899, 933, 955, 1113
BstH2I	RGCGCY	1 cut(s)	1542
BstHHI	GCGC	1 cut(s)	1541
BstKTI	GATC	3 cut(s)	465, 1512, 1533
BstMAI	GTCTC	2 cut(s)	42, 1463
BstMBI	GATC	3 cut(s)	462, 1509, 1530
BstMWI	GCNNNNNNNGC	4 cut(s)	84, 347, 371, 1262
BstNI	CCWGG	1 cut(s)	1105
BstNSI	RCATGY	1 cut(s)	563
BstPI	GGTNACC	1 cut(s)	1327
BstSCI	CCNGG	3 cut(s)	1103, 1353, 1354
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	1 cut(s)	367
BstV1I	GCAGC	3 cut(s)	120, 601, 604
BstV2I	GAAGAC	2 cut(s)	253, 262
BstX2I	RGATCY	1 cut(s)	1530
BstYI	RGATCY	1 cut(s)	1530
BsuI	GTATCC	1 cut(s)	545
BsuRI	GGCC	4 cut(s)	78, 222, 354, 1451
BtgI	CCRYGG	3 cut(s)	1266, 1332, 1446
BtsCI	GGATG	4 cut(s)	899, 933, 955, 1113
BtsI	GCAGTG	2 cut(s)	29, 1027
BtsIMutI	CAGTG	6 cut(s)	29, 384, 416, 714, 1027, 1546
BveI	ACCTGC	1 cut(s)	623
Cac8I	GCNNGC	5 cut(s)	85, 348, 352, 967, 1339
CciI	TCATGA	1 cut(s)	648
CfoI	GCGC	1 cut(s)	1541
Cfr13I	GGNCC	6 cut(s)	221, 353, 848, 1358, 1384, 1559
Cfr9I	CCCGGG	1 cut(s)	1354
CseI	GACGC	1 cut(s)	1383
Csp6I	GTAC	6 cut(s)	307, 328, 520, 589, 940, 1294
CspCI	CAANNNNNGTGG	2 cut(s)	411, 446
CviAII	CATG	8 cut(s)	539, 560, 649, 1138, 1225, 1267, 1333, 1581
CviQI	GTAC	6 cut(s)	307, 328, 520, 589, 940, 1294
DdeI	CTNAG	3 cut(s)	209, 473, 1535
DpnI	GATC	3 cut(s)	464, 1511, 1532
DpnII	GATC	3 cut(s)	462, 1509, 1530
DraI	TTTAAA	1 cut(s)	1555
EaeI	YGGCCR	1 cut(s)	76
Eam1104I	CTCTTC	1 cut(s)	1439
EarI	CTCTTC	1 cut(s)	1439
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	2 cut(s)	1266, 1332
Eco24I	GRGCYC	1 cut(s)	117
Eco32I	GATATC	1 cut(s)	879
Eco47I	GGWCC	4 cut(s)	848, 1358, 1384, 1559
Eco47III	AGCGCT	1 cut(s)	1540
Eco53kI	GAGCTC	1 cut(s)	115
Eco72I	CACGTG	1 cut(s)	482
Eco88I	CYCGRG	1 cut(s)	1354
Eco91I	GGTNACC	1 cut(s)	1327
EcoICRI	GAGCTC	1 cut(s)	115
EcoO109I	RGGNCCY	3 cut(s)	1358, 1384, 1559
EcoO65I	GGTNACC	1 cut(s)	1327
EcoRII	CCWGG	1 cut(s)	1103
EcoRV	GATATC	1 cut(s)	879
EcoT14I	CCWWGG	2 cut(s)	1266, 1332
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	2 cut(s)	1266, 1332
Esp3I	CGTCTC	1 cut(s)	42
FaeI	CATG	8 cut(s)	542, 563, 652, 1141, 1228, 1270, 1336, 1584
FaqI	GGGAC	5 cut(s)	777, 1166, 1337, 1371, 1386
FatI	CATG	8 cut(s)	538, 559, 648, 1137, 1224, 1266, 1332, 1580
FauI	CCCGC	1 cut(s)	92
FauNDI	CATATG	1 cut(s)	813
FbaI	TGATCA	1 cut(s)	1509
Fnu4HI	GCNGC	4 cut(s)	134, 220, 615, 618
FokI	GGATG	4 cut(s)	906, 920, 962, 1120
FriOI	GRGCYC	1 cut(s)	117
Fsp4HI	GCNGC	4 cut(s)	134, 220, 615, 618
FspBI	CTAG	4 cut(s)	426, 684, 1095, 1125
GlaI	GCGC	1 cut(s)	1540
GluI	GCNGC	4 cut(s)	134, 220, 615, 618
GsuI	CTGGAG	2 cut(s)	355, 1087
HaeII	RGCGCY	1 cut(s)	1542
HaeIII	GGCC	4 cut(s)	78, 222, 354, 1451
HapII	CCGG	3 cut(s)	75, 180, 1355
HgaI	GACGC	1 cut(s)	1383
HhaI	GCGC	1 cut(s)	1541
Hin1II	CATG	8 cut(s)	542, 563, 652, 1141, 1228, 1270, 1336, 1584
Hin6I	GCGC	1 cut(s)	1539
HinP1I	GCGC	1 cut(s)	1539
HindIII	AAGCTT	1 cut(s)	344
HinfI	GANTC	5 cut(s)	71, 546, 652, 732, 775
HpaII	CCGG	3 cut(s)	75, 180, 1355
HphI	GGTGA	8 cut(s)	16, 29, 169, 256, 509, 907, 1140, 1339
Hpy166II	GTNNAC	2 cut(s)	1168, 1189
Hpy188I	TCNGA	1 cut(s)	1244
Hpy188III	TCNNGA	6 cut(s)	649, 874, 1006, 1125, 1468, 1534
Hpy8I	GTNNAC	2 cut(s)	1168, 1189
HpyCH4III	ACNGT	5 cut(s)	56, 268, 575, 1293, 1519
HpyCH4IV	ACGT	2 cut(s)	459, 481
HpyCH4V	TGCA	8 cut(s)	446, 542, 632, 671, 923, 1001, 1118, 1224
HpyF10VI	GCNNNNNNNGC	4 cut(s)	84, 347, 371, 1262
HpyF3I	CTNAG	3 cut(s)	209, 473, 1535
HpySE526I	ACGT	2 cut(s)	459, 481
Hsp92II	CATG	8 cut(s)	542, 563, 652, 1141, 1228, 1270, 1336, 1584
HspAI	GCGC	1 cut(s)	1539
Ksp22I	TGATCA	1 cut(s)	1509
Kzo9I	GATC	3 cut(s)	462, 1509, 1530
LmnI	GCTCC	2 cut(s)	305, 1133
Lsp1109I	GCAGC	3 cut(s)	120, 601, 604
LweI	GCATC	2 cut(s)	790, 921
MaeI	CTAG	4 cut(s)	426, 684, 1095, 1125
MaeII	ACGT	2 cut(s)	459, 481
MaeIII	GTNAC	7 cut(s)	17, 122, 184, 418, 925, 1090, 1327
MalI	GATC	3 cut(s)	464, 1511, 1532
MboI	GATC	3 cut(s)	462, 1509, 1530
MboII	GAAGA	4 cut(s)	253, 262, 1063, 1426
MflI	RGATCY	1 cut(s)	1530
MhlI	GDGCHC	3 cut(s)	117, 177, 367
MluCI	AATT	5 cut(s)	142, 743, 861, 1035, 1458
MlyI	GAGTC	1 cut(s)	784
MmeI	TCCRAC	3 cut(s)	871, 1009, 1376
Mph1103I	ATGCAT	1 cut(s)	1120
MseI	TTAA	2 cut(s)	456, 1554
MslI	CAYNNNNRTG	2 cut(s)	170, 182
MspA1I	CMGCKG	1 cut(s)	451
MspI	CCGG	3 cut(s)	75, 180, 1355
MspR9I	CCNGG	3 cut(s)	1105, 1355, 1356
Mva1269I	GAATGC	3 cut(s)	1001, 1118, 1256
MvaI	CCWGG	1 cut(s)	1105
MwoI	GCNNNNNNNGC	4 cut(s)	84, 347, 371, 1262
NciI	CCSGG	2 cut(s)	1355, 1356
NcoI	CCATGG	2 cut(s)	1266, 1332
NdeI	CATATG	1 cut(s)	813
NdeII	GATC	3 cut(s)	462, 1509, 1530
NlaIII	CATG	8 cut(s)	542, 563, 652, 1141, 1228, 1270, 1336, 1584
NlaIV	GGNNCC	7 cut(s)	355, 366, 526, 1135, 1359, 1385, 1532
NmeAIII	GCCGAG	3 cut(s)	78, 888, 1522
NmuCI	GTSAC	4 cut(s)	17, 122, 184, 1327
NsiI	ATGCAT	1 cut(s)	1120
NspI	RCATGY	1 cut(s)	563
OliI	CACNNNNGTG	1 cut(s)	182
PagI	TCATGA	1 cut(s)	648
PaqCI	CACCTGC	1 cut(s)	623
PcsI	WCGNNNNNNNCGW	1 cut(s)	1182
PctI	GAATGC	3 cut(s)	1001, 1118, 1256
PfeI	GAWTC	4 cut(s)	71, 546, 652, 732
PflMI	CCANNNNNTGG	2 cut(s)	56, 317
PfoI	TCCNGGA	1 cut(s)	1103
PkrI	GCNGC	4 cut(s)	135, 221, 616, 619
PleI	GAGTC	1 cut(s)	783
PmaCI	CACGTG	1 cut(s)	482
PmlI	CACGTG	1 cut(s)	482
PpsI	GAGTC	1 cut(s)	783
Ppu21I	YACGTR	1 cut(s)	482
PpuMI	RGGWCCY	3 cut(s)	1358, 1384, 1559
PsiI	TTATAA	2 cut(s)	251, 569
Psp124BI	GAGCTC	1 cut(s)	117
Psp5II	RGGWCCY	3 cut(s)	1358, 1384, 1559
Psp6I	CCWGG	1 cut(s)	1103
PspCI	CACGTG	1 cut(s)	482
PspEI	GGTNACC	1 cut(s)	1327
PspGI	CCWGG	1 cut(s)	1103
PspN4I	GGNNCC	7 cut(s)	355, 366, 526, 1135, 1359, 1385, 1532
PspPI	GGNCC	6 cut(s)	221, 353, 848, 1358, 1384, 1559
PspPPI	RGGWCCY	3 cut(s)	1358, 1384, 1559
PsuI	RGATCY	1 cut(s)	1530
PvuII	CAGCTG	1 cut(s)	451
RsaI	GTAC	6 cut(s)	308, 329, 521, 590, 941, 1295
RsaNI	GTAC	6 cut(s)	307, 328, 520, 589, 940, 1294
RseI	CAYNNNNRTG	2 cut(s)	170, 182
SacI	GAGCTC	1 cut(s)	117
SaqAI	TTAA	2 cut(s)	456, 1554
SatI	GCNGC	4 cut(s)	134, 220, 615, 618
Sau3AI	GATC	3 cut(s)	462, 1509, 1530
Sau96I	GGNCC	6 cut(s)	221, 353, 848, 1358, 1384, 1559
SchI	GAGTC	1 cut(s)	784
ScrFI	CCNGG	3 cut(s)	1105, 1355, 1356
SduI	GDGCHC	3 cut(s)	117, 177, 367
SfaNI	GCATC	2 cut(s)	790, 921
SfcI	CTRYAG	1 cut(s)	1275
SinI	GGWCC	4 cut(s)	848, 1358, 1384, 1559
SmaI	CCCGGG	1 cut(s)	1356
SmiMI	CAYNNNNRTG	2 cut(s)	170, 182
SmlI	CTYRAG	1 cut(s)	116
SmoI	CTYRAG	1 cut(s)	116
Sse9I	AATT	5 cut(s)	142, 743, 861, 1035, 1458
SsiI	CCGC	6 cut(s)	15, 85, 219, 969, 1058, 1500
SspI	AATATT	1 cut(s)	990
SspMI	CTAG	4 cut(s)	426, 684, 1095, 1125
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	3 cut(s)	1103, 1353, 1354
StyI	CCWWGG	2 cut(s)	1266, 1332
TaaI	ACNGT	5 cut(s)	56, 268, 575, 1293, 1519
TaiI	ACGT	2 cut(s)	462, 484
TaqI	TCGA	2 cut(s)	509, 1467
TasI	AATT	5 cut(s)	142, 743, 861, 1035, 1458
TatI	WGTACW	2 cut(s)	327, 1293
TauI	GCSGC	1 cut(s)	222
TfiI	GAWTC	4 cut(s)	71, 546, 652, 732
Tru1I	TTAA	2 cut(s)	456, 1554
Tru9I	TTAA	2 cut(s)	456, 1554
TscAI	CASTG	6 cut(s)	36, 391, 416, 721, 1027, 1553
TseFI	GTSAC	4 cut(s)	17, 122, 184, 1327
TseI	GCWGC	3 cut(s)	133, 614, 617
Tsp45I	GTSAC	4 cut(s)	17, 122, 184, 1327
TspDTI	ATGAA	2 cut(s)	975, 1201
TspGWI	ACGGA	2 cut(s)	537, 689
TspMI	CCCGGG	1 cut(s)	1354
TspRI	CASTG	6 cut(s)	36, 391, 416, 721, 1027, 1553
Van91I	CCANNNNNTGG	2 cut(s)	56, 317
VpaK11BI	GGWCC	4 cut(s)	848, 1358, 1384, 1559
XapI	RAATTY	2 cut(s)	142, 743
XbaI	TCTAGA	1 cut(s)	1124
XceI	RCATGY	1 cut(s)	563
XmaI	CCCGGG	1 cut(s)	1354
XspI	CTAG	4 cut(s)	426, 684, 1095, 1125
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.