Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000367

Physical Location & Seq

Genomic Coordinates Forward (+)

16553716 .. 16555829

Gene Structure 2114 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1190000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCCGGCGGTGGATTTGGAGCCTCATCAGGAGGCGAAAACTTCGAAGCGAAGATCACGCCCCTTGTGATCATTTCGTGCATAATGGCTGCTAGCGGAGGCCTCATGTTCGGTTATGATGTTGGCATTTCAGGGGGTGTTACATCCATGCCCCATTTCCAAAAGAAATTCTTCCCGGTTGTGTATAGGAAGACTCAAGAATCTGGACTAGAGAGCAACTACTGCAAATATGATAATCAAGGCTTGCAGTTGTTCACATCTTCATTGTACCTGGCTGCTTTAATATCAACCTTTTTTGCGTCGTACACTACCAGATCGCTAGGTCGAAAGCTAACTATGTTGATTGCCGGGATATTTTTCATAGCCGGAACAGTTTTTAATGCTGCAGCTATTAACCTTCTCATGCTTATCATTGGGAGGATCTTGCTTGGTTGTGGAGTTGGTTTTGCTAACCAGGCAGTTCCGCTTTTCCTTTCGGAAATTGCGCCGGCAAGAATTCGAGGGGCACTTAACATCCTCTTCCAACTCAATATCACCATTGGCATTCTTTTTGCAAACCTTATCAATTATGGAACTAACAAAATTACAGGAGGATATGGGTGGAGAGTGTCATTGGGTTTGGCTGGGATTCCAGCAGGTTTGCTAACCTTGGGGTCTCTCATTGTGGTAGATACTCCTAACAGTTTGATTGAACGAGGTAAGTTGGAGGAAGGAAAAGCAGTTCTTAAAAGGATTCGTGGTGTTGACAATGTGGATCCAGAATTCTTAGAGATTGTTGAGGCAAGTCGGGTGGCTAAAGAAGTGAAGAATCCCTTCCAAAATCTCCTTAAGCGTAGGAACAGGCCACAACTGGTCATTGCAGTTATGATGCAGGTGTTCCAACAATTCACTGGCATCAATGCTGTCATGTTCTACGCCCCGGTTTTATTCCAGACCTTGGGTTTTAAAAGTGATGCTTCCCTCTACTCAGCGGTCATAACAGGAGCTGTCAACGTGCTATCAACCGTTGTATCAATCTACTTTGTTGACAAAGCTGGTCGCCGCATTCTCTTATTAGAAGCCGGTGTCCAGATGTTCCTTTCTCAATTGGTGGTTGCAATAGTTATGGGACTCAGAGTCCAGGAACACTCTAACAACCTTACTCCAGGCTTGGCAATCCTTGTAGTGGTTATGGTTTGTAGCTTTGTGTCTTCCTTTGCCTGGTCTTGGGGACCTCTTGGGTGGTTGATCCCTAGTGAGACATTCCCGCTGGAGGCTCGCTCAGCCGGCCAGAGTGTGACTGTGTGCATCAACATGCTCTTCACCTTTATTATAGCACAAGCCTTCCTCTCAATGCTTTGCCATATGAAGTTTGGCATTTTCTTGTTCTTCTGTGCTTGGGTCCTTGTCATGACAATCTTTGTCGTGTTCTTAATTCCTGAGACCAAGGGGGTCCCGATCGAAGAGATGTCTGAAAGAGTCTGGAAACAACATTGGTTCTGGAAGGGATTCATGGATGACTTTGAAGATGGTGCCAAGGCATATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005356 GO:0005358 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009651 GO:0009679 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030054 GO:0033993 GO:0034219 GO:0034220 GO:0042221 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901700 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

510

Amino Acids

55.68

Weight (kDa)

9.06

Isoelectric Point (pI)

33.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	27 - 485	8e-127	Sugar (and other) transporter
MFS_1	PF07690	79 - 437	2.6e-23	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26340
fragaria_vesca	FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica	MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica	Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis	pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis	RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata	RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora	Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii	Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa	Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha	Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana	Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	862
Acc36I	ACCTGC	2 cut(s)	626, 862
AccB1I	GGYRCC	1 cut(s)	1511
AccB7I	CCANNNNNTGG	1 cut(s)	937
AciI	CCGC	6 cut(s)	9, 96, 464, 971, 1042, 1247
AclWI	GGATC	4 cut(s)	428, 749, 762, 1222
AcoI	YGGCCR	2 cut(s)	3, 1267
AcsI	RAATTY	3 cut(s)	167, 495, 761
AfaI	GTAC	2 cut(s)	269, 305
AfiI	CCNNNNNNNGG	5 cut(s)	937, 1165, 1200, 1206, 1252
AflII	CTTAAG	1 cut(s)	827
AgsI	TTSAA	2 cut(s)	692, 1505
AhdI	GACNNNNNGTC	1 cut(s)	1115
AjnI	CCWGG	5 cut(s)	270, 453, 1119, 1144, 1199
AloI	GAACNNNNNNTCC	2 cut(s)	705, 737
AluBI	AGCT	5 cut(s)	331, 389, 986, 1034, 1182
AluI	AGCT	5 cut(s)	331, 389, 986, 1034, 1182
Alw26I	GTCTC	3 cut(s)	660, 1232, 1415
AlwI	GGATC	4 cut(s)	428, 749, 762, 1222
AlwNI	CAGNNNCTG	1 cut(s)	986
AoxI	GGCC	4 cut(s)	3, 100, 842, 1267
ApeKI	GCWGC	4 cut(s)	89, 275, 383, 386
ApoI	RAATTY	3 cut(s)	167, 495, 761
Asp700I	GAANNNNTTC	3 cut(s)	170, 812, 1487
AspLEI	GCGC	1 cut(s)	487
AspS9I	GGNCC	3 cut(s)	1211, 1381, 1432
AsuC2I	CCSGG	3 cut(s)	176, 349, 920
AsuHPI	GGTGA	2 cut(s)	526, 1294
AsuII	TTCGAA	1 cut(s)	45
AsuNHI	GCTAGC	1 cut(s)	92
AvaII	GGWCC	3 cut(s)	1211, 1381, 1432
BaeGI	GKGCMC	1 cut(s)	508
BaeI	ACNNNNGTAYC	2 cut(s)	993, 1026
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	1 cut(s)	1511
BbsI	GAAGAC	2 cut(s)	197, 1182
BbvI	GCAGC	4 cut(s)	76, 262, 370, 398
BccI	CCATC	1 cut(s)	1502
BciT130I	CCWGG	5 cut(s)	272, 455, 1121, 1146, 1201
BclI	TGATCA	1 cut(s)	69
BcnI	CCSGG	3 cut(s)	176, 349, 920
BcoDI	GTCTC	3 cut(s)	660, 1232, 1415
BfaI	CTAG	4 cut(s)	93, 209, 320, 1233
BfmI	CTRYAG	1 cut(s)	384
BfrI	CTTAAG	1 cut(s)	827
BfuAI	ACCTGC	2 cut(s)	626, 862
BisI	GCNGC	5 cut(s)	90, 276, 384, 387, 1042
BlpI	GCTNAGC	1 cut(s)	1261
BlsI	GCNGC	5 cut(s)	91, 277, 385, 388, 1043
Bme1390I	CCNGG	8 cut(s)	176, 272, 349, 455, 920, 1121, 1146, 1201
Bme18I	GGWCC	3 cut(s)	1211, 1381, 1432
BmeRI	GACNNNNNGTC	1 cut(s)	1115
BmgT120I	GGNCC	3 cut(s)	1211, 1381, 1432
BmiI	GGNNCC	7 cut(s)	22, 756, 1212, 1382, 1433, 1434, 1513
BmrFI	CCNGG	8 cut(s)	176, 272, 349, 455, 920, 1121, 1146, 1201
BmsI	GCATC	4 cut(s)	858, 903, 943, 1296
BmtI	GCTAGC	1 cut(s)	96
BpiI	GAAGAC	2 cut(s)	197, 1182
BplI	GAGNNNNNCTC	2 cut(s)	1244, 1276
BpmI	CTGGAG	2 cut(s)	1128, 1271
Bpu1102I	GCTNAGC	1 cut(s)	1261
Bpu14I	TTCGAA	1 cut(s)	45
BpuEI	CTTGAG	1 cut(s)	180
BpuMI	CCSGG	3 cut(s)	176, 349, 920
BsaI	GGTCTC	2 cut(s)	660, 1415
BsaJI	CCNNGG	5 cut(s)	648, 918, 936, 1425, 1515
Bsc4I	CCNNNNNNNGG	5 cut(s)	937, 1165, 1200, 1206, 1252
Bse118I	RCCGGY	4 cut(s)	5, 487, 1061, 1265
Bse1I	ACTGG	2 cut(s)	855, 895
Bse3DI	GCAATG	1 cut(s)	855
BseBI	CCWGG	5 cut(s)	272, 455, 1121, 1146, 1201
BseDI	CCNNGG	5 cut(s)	648, 918, 936, 1425, 1515
BseGI	GGATG	3 cut(s)	143, 513, 1501
BseLI	CCNNNNNNNGG	5 cut(s)	937, 1165, 1200, 1206, 1252
BseMI	GCAATG	1 cut(s)	855
BseMII	CTCAG	4 cut(s)	981, 1126, 1275, 1410
BseNI	ACTGG	2 cut(s)	855, 895
BseSI	GKGCMC	1 cut(s)	508
BseXI	GCAGC	4 cut(s)	76, 262, 370, 398
BseYI	CCCAGC	1 cut(s)	623
Bsh1285I	CGRYCG	1 cut(s)	1440
BshFI	GGCC	4 cut(s)	5, 102, 844, 1269
BshNI	GGYRCC	1 cut(s)	1511
BsiEI	CGRYCG	1 cut(s)	1440
BsiSI	CCGG	8 cut(s)	6, 176, 348, 366, 488, 920, 1062, 1266
BslFI	GGGAC	3 cut(s)	1122, 1224, 1418
BslI	CCNNNNNNNGG	5 cut(s)	937, 1165, 1200, 1206, 1252
BsmAI	GTCTC	3 cut(s)	660, 1232, 1415
BsmFI	GGGAC	3 cut(s)	1122, 1224, 1418
BsmI	GAATGC	2 cut(s)	543, 1044
BsnI	GGCC	4 cut(s)	5, 102, 844, 1269
Bso31I	GGTCTC	2 cut(s)	660, 1415
Bsp119I	TTCGAA	1 cut(s)	45
Bsp1286I	GDGCHC	1 cut(s)	508
Bsp143I	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
Bsp1720I	GCTNAGC	1 cut(s)	1261
BspACI	CCGC	6 cut(s)	9, 96, 464, 971, 1042, 1247
BspANI	GGCC	4 cut(s)	5, 102, 844, 1269
BspCNI	CTCAG	4 cut(s)	980, 1125, 1274, 1411
BspHI	TCATGA	1 cut(s)	1389
BspLI	GGNNCC	7 cut(s)	22, 756, 1212, 1382, 1433, 1434, 1513
BspMAI	CTGCAG	1 cut(s)	388
BspMI	ACCTGC	2 cut(s)	626, 862
BspOI	GCTAGC	1 cut(s)	96
BspPI	GGATC	4 cut(s)	428, 749, 762, 1222
BspQI	GCTCTTC	1 cut(s)	1304
BspT104I	TTCGAA	1 cut(s)	45
BspT107I	GGYRCC	1 cut(s)	1511
BspTI	CTTAAG	1 cut(s)	827
BspTNI	GGTCTC	2 cut(s)	660, 1415
BsrDI	GCAATG	1 cut(s)	855
BsrFI	RCCGGY	4 cut(s)	5, 487, 1061, 1265
BsrI	ACTGG	2 cut(s)	855, 895
BssAI	RCCGGY	4 cut(s)	5, 487, 1061, 1265
BssECI	CCNNGG	5 cut(s)	648, 918, 936, 1425, 1515
BssMI	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
BssT1I	CCWWGG	4 cut(s)	648, 936, 1425, 1515
Bst2UI	CCWGG	5 cut(s)	272, 455, 1121, 1146, 1201
Bst4CI	ACNGT	4 cut(s)	373, 683, 1006, 1282
Bst6I	CTCTTC	3 cut(s)	524, 1304, 1437
BstAFI	CTTAAG	1 cut(s)	827
BstAPI	GCANNNNNTGC	1 cut(s)	222
BstBI	TTCGAA	1 cut(s)	45
BstC8I	GCNNGC	6 cut(s)	7, 94, 245, 489, 1258, 1267
BstDEI	CTNAG	5 cut(s)	766, 967, 1112, 1261, 1419
BstF5I	GGATG	3 cut(s)	143, 513, 1501
BstHHI	GCGC	1 cut(s)	487
BstKTI	GATC	7 cut(s)	57, 72, 317, 423, 757, 1230, 1440
BstMAI	GTCTC	3 cut(s)	660, 1232, 1415
BstMBI	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
BstMCI	CGRYCG	1 cut(s)	1440
BstMWI	GCNNNNNNNGC	4 cut(s)	222, 455, 1262, 1266
BstNI	CCWGG	5 cut(s)	272, 455, 1121, 1146, 1201
BstNSI	RCATGY	1 cut(s)	1297
BstSCI	CCNGG	8 cut(s)	174, 270, 347, 453, 918, 1119, 1144, 1199
BstSFI	CTRYAG	1 cut(s)	384
BstSLI	GKGCMC	1 cut(s)	508
BstV1I	GCAGC	4 cut(s)	76, 262, 370, 398
BstV2I	GAAGAC	2 cut(s)	197, 1182
BstX2I	RGATCY	2 cut(s)	420, 754
BstYI	RGATCY	2 cut(s)	420, 754
BsuRI	GGCC	4 cut(s)	5, 102, 844, 1269
BtsCI	GGATG	3 cut(s)	143, 513, 1501
BtsIMutI	CAGTG	1 cut(s)	888
BveI	ACCTGC	2 cut(s)	626, 862
Cac8I	GCNNGC	6 cut(s)	7, 94, 245, 489, 1258, 1267
CaiI	CAGNNNCTG	1 cut(s)	986
CciI	TCATGA	1 cut(s)	1389
CfoI	GCGC	1 cut(s)	487
Cfr10I	RCCGGY	4 cut(s)	5, 487, 1061, 1265
Cfr13I	GGNCC	3 cut(s)	1211, 1381, 1432
CseI	GACGC	1 cut(s)	288
Csp6I	GTAC	2 cut(s)	268, 304
CspCI	CAANNNNNGTGG	2 cut(s)	771, 806
CviAII	CATG	7 cut(s)	106, 148, 403, 907, 1294, 1390, 1492
CviQI	GTAC	2 cut(s)	268, 304
DdeI	CTNAG	5 cut(s)	766, 967, 1112, 1261, 1419
DpnI	GATC	7 cut(s)	56, 71, 316, 422, 756, 1229, 1439
DpnII	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
DraI	TTTAAA	1 cut(s)	946
DriI	GACNNNNNGTC	1 cut(s)	1115
EaeI	YGGCCR	2 cut(s)	3, 1267
Eam1104I	CTCTTC	3 cut(s)	524, 1304, 1437
Eam1105I	GACNNNNNGTC	1 cut(s)	1115
EarI	CTCTTC	3 cut(s)	524, 1304, 1437
Eco130I	CCWWGG	4 cut(s)	648, 936, 1425, 1515
Eco147I	AGGCCT	1 cut(s)	102
Eco31I	GGTCTC	2 cut(s)	660, 1415
Eco47I	GGWCC	3 cut(s)	1211, 1381, 1432
EcoO109I	RGGNCCY	3 cut(s)	1211, 1381, 1432
EcoRI	GAATTC	2 cut(s)	495, 761
EcoRII	CCWGG	5 cut(s)	270, 453, 1119, 1144, 1199
EcoT14I	CCWWGG	4 cut(s)	648, 936, 1425, 1515
ErhI	CCWWGG	4 cut(s)	648, 936, 1425, 1515
FaeI	CATG	7 cut(s)	109, 151, 406, 910, 1297, 1393, 1495
FalI	AAGNNNNNCTT	8 cut(s)	155, 187, 708, 740, 797, 829, 940, 972
FaqI	GGGAC	3 cut(s)	1122, 1224, 1418
FatI	CATG	7 cut(s)	105, 147, 402, 906, 1293, 1389, 1491
FauI	CCCGC	1 cut(s)	1254
FauNDI	CATATG	2 cut(s)	1344, 1522
FbaI	TGATCA	1 cut(s)	69
Fnu4HI	GCNGC	5 cut(s)	90, 276, 384, 387, 1042
FokI	GGATG	3 cut(s)	130, 500, 1508
Fsp4HI	GCNGC	5 cut(s)	90, 276, 384, 387, 1042
FspBI	CTAG	4 cut(s)	93, 209, 320, 1233
GlaI	GCGC	1 cut(s)	486
GluI	GCNGC	5 cut(s)	90, 276, 384, 387, 1042
GsaI	CCCAGC	1 cut(s)	627
GsuI	CTGGAG	2 cut(s)	1128, 1271
HaeIII	GGCC	4 cut(s)	5, 102, 844, 1269
HapII	CCGG	8 cut(s)	6, 176, 348, 366, 488, 920, 1062, 1266
HgaI	GACGC	1 cut(s)	288
HhaI	GCGC	1 cut(s)	487
Hin1II	CATG	7 cut(s)	109, 151, 406, 910, 1297, 1393, 1495
Hin6I	GCGC	1 cut(s)	485
HinP1I	GCGC	1 cut(s)	485
HincII	GTYRAC	3 cut(s)	745, 991, 1027
HindII	GTYRAC	3 cut(s)	745, 991, 1027
HinfI	GANTC	9 cut(s)	193, 200, 628, 733, 808, 1110, 1116, 1458, 1488
HpaII	CCGG	8 cut(s)	6, 176, 348, 366, 488, 920, 1062, 1266
HphI	GGTGA	2 cut(s)	526, 1294
Hpy166II	GTNNAC	5 cut(s)	255, 306, 745, 991, 1027
Hpy188I	TCNGA	3 cut(s)	478, 1115, 1453
Hpy8I	GTNNAC	5 cut(s)	255, 306, 745, 991, 1027
Hpy99I	CGWCG	1 cut(s)	304
HpyAV	CCTTC	5 cut(s)	407, 704, 823, 1333, 1477
HpyCH4III	ACNGT	4 cut(s)	373, 683, 1006, 1282
HpyCH4IV	ACGT	1 cut(s)	993
HpyCH4V	TGCA	9 cut(s)	81, 225, 247, 386, 554, 860, 871, 1097, 1287
HpyF10VI	GCNNNNNNNGC	4 cut(s)	222, 455, 1262, 1266
HpyF3I	CTNAG	5 cut(s)	766, 967, 1112, 1261, 1419
HpySE526I	ACGT	1 cut(s)	993
Hsp92II	CATG	7 cut(s)	109, 151, 406, 910, 1297, 1393, 1495
HspAI	GCGC	1 cut(s)	485
KflI	GGGWCCC	1 cut(s)	1432
KroI	GCCGGC	3 cut(s)	5, 487, 1265
KroNI	GCCGGC	3 cut(s)	7, 489, 1267
Ksp22I	TGATCA	1 cut(s)	69
Kzo9I	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
LguI	GCTCTTC	1 cut(s)	1304
LmnI	GCTCC	2 cut(s)	20, 983
Lsp1109I	GCAGC	4 cut(s)	76, 262, 370, 398
LweI	GCATC	4 cut(s)	858, 903, 943, 1296
MaeI	CTAG	4 cut(s)	93, 209, 320, 1233
MaeII	ACGT	1 cut(s)	993
MaeIII	GTNAC	2 cut(s)	139, 1276
MalI	GATC	7 cut(s)	56, 71, 316, 422, 756, 1229, 1439
MboI	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
MfeI	CAATTG	1 cut(s)	1085
MflI	RGATCY	2 cut(s)	420, 754
MhlI	GDGCHC	1 cut(s)	508
MluCI	AATT	9 cut(s)	167, 480, 495, 565, 582, 761, 884, 1085, 1413
MlyI	GAGTC	4 cut(s)	187, 1104, 1125, 1467
MmeI	TCCRAC	3 cut(s)	547, 684, 904
MroNI	GCCGGC	3 cut(s)	5, 487, 1265
MroXI	GAANNNNTTC	3 cut(s)	170, 812, 1487
MseI	TTAA	9 cut(s)	281, 378, 393, 510, 726, 828, 945, 1412, 1528
MslI	CAYNNNNRTG	1 cut(s)	1292
MspA1I	CMGCKG	2 cut(s)	971, 1249
MspCI	CTTAAG	1 cut(s)	827
MspI	CCGG	8 cut(s)	6, 176, 348, 366, 488, 920, 1062, 1266
MspR9I	CCNGG	8 cut(s)	176, 272, 349, 455, 920, 1121, 1146, 1201
MunI	CAATTG	1 cut(s)	1085
Mva1269I	GAATGC	2 cut(s)	543, 1044
MvaI	CCWGG	5 cut(s)	272, 455, 1121, 1146, 1201
MwoI	GCNNNNNNNGC	4 cut(s)	222, 455, 1262, 1266
NaeI	GCCGGC	3 cut(s)	7, 489, 1267
NciI	CCSGG	3 cut(s)	176, 349, 920
NdeI	CATATG	2 cut(s)	1344, 1522
NdeII	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
NgoMIV	GCCGGC	3 cut(s)	5, 487, 1265
NheI	GCTAGC	1 cut(s)	92
NlaIII	CATG	7 cut(s)	109, 151, 406, 910, 1297, 1393, 1495
NlaIV	GGNNCC	7 cut(s)	22, 756, 1212, 1382, 1433, 1434, 1513
NmuCI	GTSAC	1 cut(s)	1276
NspI	RCATGY	1 cut(s)	1297
NspV	TTCGAA	1 cut(s)	45
PagI	TCATGA	1 cut(s)	1389
PaqCI	CACCTGC	1 cut(s)	862
PceI	AGGCCT	1 cut(s)	102
PciSI	GCTCTTC	1 cut(s)	1304
PctI	GAATGC	2 cut(s)	543, 1044
PdiI	GCCGGC	3 cut(s)	7, 489, 1267
PdmI	GAANNNNTTC	3 cut(s)	170, 812, 1487
PfeI	GAWTC	5 cut(s)	200, 628, 733, 808, 1488
PflMI	CCANNNNNTGG	1 cut(s)	937
PfoI	TCCNGGA	1 cut(s)	1119
PkrI	GCNGC	5 cut(s)	91, 277, 385, 388, 1043
Ple19I	CGATCG	1 cut(s)	1440
PleI	GAGTC	4 cut(s)	187, 1104, 1124, 1466
PpsI	GAGTC	4 cut(s)	187, 1104, 1124, 1466
PpuMI	RGGWCCY	3 cut(s)	1211, 1381, 1432
Psp5II	RGGWCCY	3 cut(s)	1211, 1381, 1432
Psp6I	CCWGG	5 cut(s)	270, 453, 1119, 1144, 1199
PspFI	CCCAGC	1 cut(s)	623
PspGI	CCWGG	5 cut(s)	270, 453, 1119, 1144, 1199
PspN4I	GGNNCC	7 cut(s)	22, 756, 1212, 1382, 1433, 1434, 1513
PspPI	GGNCC	3 cut(s)	1211, 1381, 1432
PspPPI	RGGWCCY	3 cut(s)	1211, 1381, 1432
PstI	CTGCAG	1 cut(s)	388
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	2 cut(s)	420, 754
PvuI	CGATCG	1 cut(s)	1440
RsaI	GTAC	2 cut(s)	269, 305
RsaNI	GTAC	2 cut(s)	268, 304
RseI	CAYNNNNRTG	1 cut(s)	1292
SapI	GCTCTTC	1 cut(s)	1304
SaqAI	TTAA	9 cut(s)	281, 378, 393, 510, 726, 828, 945, 1412, 1528
SatI	GCNGC	5 cut(s)	90, 276, 384, 387, 1042
Sau3AI	GATC	7 cut(s)	54, 69, 314, 420, 754, 1227, 1437
Sau96I	GGNCC	3 cut(s)	1211, 1381, 1432
SchI	GAGTC	4 cut(s)	187, 1104, 1125, 1467
ScrFI	CCNGG	8 cut(s)	176, 272, 349, 455, 920, 1121, 1146, 1201
SduI	GDGCHC	1 cut(s)	508
SfaNI	GCATC	4 cut(s)	858, 903, 943, 1296
SfcI	CTRYAG	1 cut(s)	384
SfuI	TTCGAA	1 cut(s)	45
SinI	GGWCC	3 cut(s)	1211, 1381, 1432
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SmlI	CTYRAG	2 cut(s)	195, 827
SmoI	CTYRAG	2 cut(s)	195, 827
Sse9I	AATT	9 cut(s)	167, 480, 495, 565, 582, 761, 884, 1085, 1413
SseBI	AGGCCT	1 cut(s)	102
SsiI	CCGC	6 cut(s)	9, 96, 464, 971, 1042, 1247
SspMI	CTAG	4 cut(s)	93, 209, 320, 1233
StuI	AGGCCT	1 cut(s)	102
StyD4I	CCNGG	8 cut(s)	174, 270, 347, 453, 918, 1119, 1144, 1199
StyI	CCWWGG	4 cut(s)	648, 936, 1425, 1515
TaaI	ACNGT	4 cut(s)	373, 683, 1006, 1282
TaiI	ACGT	1 cut(s)	996
TaqI	TCGA	4 cut(s)	45, 325, 499, 1440
TasI	AATT	9 cut(s)	167, 480, 495, 565, 582, 761, 884, 1085, 1413
TauI	GCSGC	1 cut(s)	1044
TfiI	GAWTC	5 cut(s)	200, 628, 733, 808, 1488
Tru1I	TTAA	9 cut(s)	281, 378, 393, 510, 726, 828, 945, 1412, 1528
Tru9I	TTAA	9 cut(s)	281, 378, 393, 510, 726, 828, 945, 1412, 1528
TscAI	CASTG	1 cut(s)	895
TseFI	GTSAC	1 cut(s)	1276
TseI	GCWGC	4 cut(s)	89, 275, 383, 386
Tsp45I	GTSAC	1 cut(s)	1276
TspDTI	ATGAA	4 cut(s)	252, 349, 1361, 1480
TspRI	CASTG	1 cut(s)	895
Van91I	CCANNNNNTGG	1 cut(s)	937
Vha464I	CTTAAG	1 cut(s)	827
VpaK11BI	GGWCC	3 cut(s)	1211, 1381, 1432
XapI	RAATTY	3 cut(s)	167, 495, 761
XceI	RCATGY	1 cut(s)	1297
XcmI	CCANNNNNNNNNTGG	2 cut(s)	887, 1349
XmnI	GAANNNNTTC	3 cut(s)	170, 812, 1487
XspI	CTAG	4 cut(s)	93, 209, 320, 1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.