MD16G1190300.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
16600558 .. 16602473
1916 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1190300.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGGCGGGTGGTGGCTTTGGGGCTGCATCAGGAGGCGGAGACTTTGAAGCAAAGATAACGCCTCTTGTGATCATTTCTTGCATAATGGCTGCTAGCGGAGGCCTCATGTTTGGTTATGATGTTGGTATCTCAGGGGGTGTTACATCCATGCCCCATTTCCAGAAGAAATTCTTCCCGGTTGTGTATAGTAAGACTCAAGAGACTGGACTTGAGAGCAACTACTGCAAATACGATAATCAAGGCTTGCAGTTGTTCACATCTTCATTATACCTCGCTGCATTAATATCAACATTCTTTGCATCGTACACAACCAGATTGCTTGGTCGAAAGTTAACTATGTTGATTGCGGGGATTTTCTTTGTAGTCGGAACAGTTTTTAATGCGGCGGCTATCAACCTTCTCATGCTTATCATTGGGAGGATCTTACTTGGTTGTGGAGTTGGTTTTGCTAACCAGGCGGTACCGCTTTTCCTTTCGGAGATTGCACCCACAAGAATTCGAGGGGCACTTAACATCCTCTTCCAACTCAATATCACCATTGGCATTCTTTTTGCAAACCTTATCAACTATGGAACTAACAAAATTACAGGAGGATATGGATGGAGAGTGTCATTGGGTTTGGCTGGGATTCCAGCAGGTATGCTAACCTTGGGGTCTCTCATTGTGGTAGACACTCCTAACAGTTTGATCGAACGGGGCAAGTTGGAGGAAGGAAAAGCAGTTCTTAAAAGGATCCGTGGTGTTGACAATGTGGATCCAGAATTCTTAGAGATTGTTGAGGCAAGTCGGGTGGCTAAAGACGTAAAGAATCCCTTCCAAAATCTTCTTAAGCGTAGGAACAGGCCACAACTGATCATTGCAGTTATGATGCAAGTGTTCCAGCAATTCACTGGCATCAACGCAGTCATGTTCTACGCTCCGGTTTTGTTTCAGACCTTGGGTTTTAAAAGTGATGCTTCCCTCTACTCCGCGGTTATAACAGGAGCTGTCAACGTGCTATCAACCGTTGTATCAATCTACTTTGTTGACAAAGCTGGTCGCCGTGTTCTCTTATTAGAAGCTGGTGTCCAGATGTTCCTTTCTCAATTGGTGGTTGCAATAGTCATGGGACTCAGAGTCCAGGAACACTCTAACAACCTTACTCCAGGCTTGGCAATCCTTGTAGTGGTTATGGTTTGTAGCTTTGTGTCTTCCTTCGCATGGTCTTGGGGACCTCTTGGGTGGTTGATCCCTAGTGAGACATTCCCGCTGGAGGCTCGCTCAGCCGGCCAGAGTGTGACTGTGTGCATCAACATGCTCTTCACCTTTATTATAGCACAAGCCTTCCTCTCAATGCTTTGCCATATGAAGTTTGGCATTTTTTTGTTCTTCTGTGCTTGGGTCCTTGTCATGACAATCTTTGTCGTGTTCTTAATTCCTGAGACCAAGGGTGTCCCGATCGAAGAGATGACAGAAAGAGTCTGGAAGCAACATTGGTTCTGGAAGAGATTCATGGATGACTTTGAAGATGATCCCAAGGGCCATGTTTGA

Protein Analysis

510

Amino Acids

55.79

Weight (kDa)

8.97

Isoelectric Point (pI)

31.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 27 - 485 1.2e-126 Sugar (and other) transporter
MFS_1 PF07690 78 - 437 1.9e-23 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 977
Acc36I ACCTGC 1 cut(s) 626
Acc65I GGTACC 1 cut(s) 460
AccB1I GGYRCC 1 cut(s) 460
AccI GTMKAC 1 cut(s) 669
AccII CGCG 1 cut(s) 971
AclWI GGATC 7 cut(s) 428, 727, 740, 749, 762, 1222, 1505
AcoI YGGCCR 1 cut(s) 1267
AcsI RAATTY 3 cut(s) 167, 495, 761
AfaI GTAC 2 cut(s) 305, 462
AfiI CCNNNNNNNGG 3 cut(s) 1165, 1200, 1252
AflII CTTAAG 1 cut(s) 827
AgsI TTSAA 2 cut(s) 47, 1505
AhdI GACNNNNNGTC 1 cut(s) 1115
AjnI CCWGG 3 cut(s) 453, 1119, 1144
AloI GAACNNNNNNTCC 2 cut(s) 705, 737
AluBI AGCT 4 cut(s) 986, 1034, 1061, 1182
AluI AGCT 4 cut(s) 986, 1034, 1061, 1182
Alw26I GTCTC 5 cut(s) 33, 194, 660, 1232, 1415
AlwI GGATC 7 cut(s) 428, 727, 740, 749, 762, 1222, 1505
AlwNI CAGNNNCTG 1 cut(s) 986
AoxI GGCC 4 cut(s) 100, 842, 1267, 1519
ApeKI GCWGC 3 cut(s) 23, 89, 275
ApoI RAATTY 3 cut(s) 167, 495, 761
AseI ATTAAT 1 cut(s) 281
Asp700I GAANNNNTTC 4 cut(s) 167, 170, 812, 1487
Asp718I GGTACC 1 cut(s) 460
AspS9I GGNCC 3 cut(s) 1211, 1381, 1519
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 2 cut(s) 526, 1294
AsuNHI GCTAGC 1 cut(s) 92
AvaII GGWCC 2 cut(s) 1211, 1381
BaeGI GKGCMC 1 cut(s) 508
BaeI ACNNNNGTAYC 2 cut(s) 993, 1026
BamHI GGATCC 2 cut(s) 732, 754
BanI GGYRCC 1 cut(s) 460
BbsI GAAGAC 1 cut(s) 1182
BbvI GCAGC 3 cut(s) 10, 76, 262
BccI CCATC 1 cut(s) 594
BceAI ACGGC 1 cut(s) 1026
BciT130I CCWGG 3 cut(s) 455, 1121, 1146
BclI TGATCA 2 cut(s) 69, 852
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 5 cut(s) 33, 194, 660, 1232, 1415
BfaI CTAG 2 cut(s) 93, 1233
BfrI CTTAAG 1 cut(s) 827
BfuAI ACCTGC 1 cut(s) 626
BisI GCNGC 5 cut(s) 24, 90, 276, 384, 387
BlpI GCTNAGC 1 cut(s) 1261
BlsI GCNGC 5 cut(s) 25, 91, 277, 385, 388
Bme1390I CCNGG 4 cut(s) 176, 455, 1121, 1146
Bme18I GGWCC 2 cut(s) 1211, 1381
BmeRI GACNNNNNGTC 1 cut(s) 1115
BmgT120I GGNCC 3 cut(s) 1211, 1381, 1519
BmiI GGNNCC 5 cut(s) 462, 734, 756, 1212, 1382
BmrFI CCNGG 4 cut(s) 176, 455, 1121, 1146
BmsI GCATC 6 cut(s) 35, 308, 858, 903, 943, 1296
BmtI GCTAGC 1 cut(s) 96
BpiI GAAGAC 1 cut(s) 1182
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 2 cut(s) 1128, 1271
Bpu1102I GCTNAGC 1 cut(s) 1261
BpuEI CTTGAG 2 cut(s) 180, 230
BpuMI CCSGG 1 cut(s) 176
BsaI GGTCTC 2 cut(s) 660, 1415
BsaJI CCNNGG 6 cut(s) 648, 736, 936, 969, 1425, 1515
BsaWI WCCGGW 1 cut(s) 919
Bsc4I CCNNNNNNNGG 3 cut(s) 1165, 1200, 1252
Bse118I RCCGGY 1 cut(s) 1265
Bse1I ACTGG 2 cut(s) 208, 895
Bse3DI GCAATG 1 cut(s) 855
BseBI CCWGG 3 cut(s) 455, 1121, 1146
BseDI CCNNGG 6 cut(s) 648, 736, 936, 969, 1425, 1515
BseGI GGATG 4 cut(s) 143, 513, 605, 1501
BseLI CCNNNNNNNGG 3 cut(s) 1165, 1200, 1252
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 4 cut(s) 144, 1126, 1275, 1410
BseNI ACTGG 2 cut(s) 208, 895
BseSI GKGCMC 1 cut(s) 508
BseXI GCAGC 3 cut(s) 10, 76, 262
BseYI CCCAGC 1 cut(s) 623
Bsh1236I CGCG 1 cut(s) 971
Bsh1285I CGRYCG 1 cut(s) 1440
BshFI GGCC 4 cut(s) 102, 844, 1269, 1521
BshNI GGYRCC 1 cut(s) 460
BsiEI CGRYCG 1 cut(s) 1440
BsiSI CCGG 3 cut(s) 176, 920, 1266
BslFI GGGAC 3 cut(s) 1122, 1224, 1418
BslI CCNNNNNNNGG 3 cut(s) 1165, 1200, 1252
BsmAI GTCTC 5 cut(s) 33, 194, 660, 1232, 1415
BsmFI GGGAC 3 cut(s) 1122, 1224, 1418
BsmI GAATGC 1 cut(s) 543
BsnI GGCC 4 cut(s) 102, 844, 1269, 1521
Bso31I GGTCTC 2 cut(s) 660, 1415
Bsp1286I GDGCHC 1 cut(s) 508
Bsp143I GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
Bsp1720I GCTNAGC 1 cut(s) 1261
BspANI GGCC 4 cut(s) 102, 844, 1269, 1521
BspCNI CTCAG 4 cut(s) 143, 1125, 1274, 1411
BspFNI CGCG 1 cut(s) 971
BspHI TCATGA 1 cut(s) 1389
BspLI GGNNCC 5 cut(s) 462, 734, 756, 1212, 1382
BspMI ACCTGC 1 cut(s) 626
BspOI GCTAGC 1 cut(s) 96
BspPI GGATC 7 cut(s) 428, 727, 740, 749, 762, 1222, 1505
BspQI GCTCTTC 1 cut(s) 1304
BspT107I GGYRCC 1 cut(s) 460
BspTI CTTAAG 1 cut(s) 827
BspTNI GGTCTC 2 cut(s) 660, 1415
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 1 cut(s) 1265
BsrI ACTGG 2 cut(s) 208, 895
BssAI RCCGGY 1 cut(s) 1265
BssECI CCNNGG 6 cut(s) 648, 736, 936, 969, 1425, 1515
BssMI GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
BssT1I CCWWGG 4 cut(s) 648, 936, 1425, 1515
Bst2UI CCWGG 3 cut(s) 455, 1121, 1146
Bst4CI ACNGT 4 cut(s) 373, 683, 1006, 1282
Bst6I CTCTTC 4 cut(s) 524, 1304, 1437, 1478
BstAFI CTTAAG 1 cut(s) 827
BstAPI GCANNNNNTGC 1 cut(s) 222
BstC8I GCNNGC 4 cut(s) 94, 245, 1258, 1267
BstDEI CTNAG 5 cut(s) 130, 766, 1112, 1261, 1419
BstDSI CCRYGG 2 cut(s) 736, 969
BstF5I GGATG 4 cut(s) 143, 513, 605, 1501
BstFNI CGCG 1 cut(s) 971
BstKTI GATC 9 cut(s) 72, 423, 690, 735, 757, 855, 1230, 1440, 1513
BstMAI GTCTC 5 cut(s) 33, 194, 660, 1232, 1415
BstMBI GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
BstMCI CGRYCG 1 cut(s) 1440
BstMWI GCNNNNNNNGC 4 cut(s) 222, 455, 1262, 1266
BstNI CCWGG 3 cut(s) 455, 1121, 1146
BstNSI RCATGY 1 cut(s) 1297
BstSCI CCNGG 4 cut(s) 174, 453, 1119, 1144
BstSLI GKGCMC 1 cut(s) 508
BstUI CGCG 1 cut(s) 971
BstV1I GCAGC 3 cut(s) 10, 76, 262
BstV2I GAAGAC 1 cut(s) 1182
BstX2I RGATCY 3 cut(s) 420, 732, 754
BstYI RGATCY 3 cut(s) 420, 732, 754
BsuRI GGCC 4 cut(s) 102, 844, 1269, 1521
BtgI CCRYGG 2 cut(s) 736, 969
BtsCI GGATG 4 cut(s) 143, 513, 605, 1501
BtsIMutI CAGTG 1 cut(s) 888
BveI ACCTGC 1 cut(s) 626
Cac8I GCNNGC 4 cut(s) 94, 245, 1258, 1267
CaiI CAGNNNCTG 1 cut(s) 986
CciI TCATGA 1 cut(s) 1389
Cfr10I RCCGGY 1 cut(s) 1265
Cfr13I GGNCC 3 cut(s) 1211, 1381, 1519
Cfr42I CCGCGG 1 cut(s) 972
Csp6I GTAC 2 cut(s) 304, 461
CspCI CAANNNNNGTGG 2 cut(s) 771, 806
CviQI GTAC 2 cut(s) 304, 461
DdeI CTNAG 5 cut(s) 130, 766, 1112, 1261, 1419
DpnI GATC 9 cut(s) 71, 422, 689, 734, 756, 854, 1229, 1439, 1512
DpnII GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
DraI TTTAAA 1 cut(s) 946
DriI GACNNNNNGTC 1 cut(s) 1115
EaeI YGGCCR 1 cut(s) 1267
Eam1104I CTCTTC 4 cut(s) 524, 1304, 1437, 1478
Eam1105I GACNNNNNGTC 1 cut(s) 1115
EarI CTCTTC 4 cut(s) 524, 1304, 1437, 1478
EciI GGCGGA 1 cut(s) 51
Eco130I CCWWGG 4 cut(s) 648, 936, 1425, 1515
Eco147I AGGCCT 1 cut(s) 102
Eco31I GGTCTC 2 cut(s) 660, 1415
Eco47I GGWCC 2 cut(s) 1211, 1381
EcoO109I RGGNCCY 2 cut(s) 1211, 1381
EcoRI GAATTC 2 cut(s) 495, 761
EcoRII CCWGG 3 cut(s) 453, 1119, 1144
EcoT14I CCWWGG 4 cut(s) 648, 936, 1425, 1515
ErhI CCWWGG 4 cut(s) 648, 936, 1425, 1515
FalI AAGNNNNNCTT 8 cut(s) 155, 187, 708, 740, 797, 829, 940, 972
FaqI GGGAC 3 cut(s) 1122, 1224, 1418
FauI CCCGC 2 cut(s) 340, 1254
FauNDI CATATG 1 cut(s) 1344
FbaI TGATCA 2 cut(s) 69, 852
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 5 cut(s) 24, 90, 276, 384, 387
FokI GGATG 4 cut(s) 130, 500, 612, 1508
Fsp4HI GCNGC 5 cut(s) 24, 90, 276, 384, 387
FspBI CTAG 2 cut(s) 93, 1233
GluI GCNGC 5 cut(s) 24, 90, 276, 384, 387
GsaI CCCAGC 1 cut(s) 627
GsuI CTGGAG 2 cut(s) 1128, 1271
HaeIII GGCC 4 cut(s) 102, 844, 1269, 1521
HapII CCGG 3 cut(s) 176, 920, 1266
HincII GTYRAC 4 cut(s) 333, 745, 991, 1027
HindII GTYRAC 4 cut(s) 333, 745, 991, 1027
HinfI GANTC 7 cut(s) 193, 628, 808, 1110, 1116, 1458, 1488
HpaI GTTAAC 1 cut(s) 333
HpaII CCGG 3 cut(s) 176, 920, 1266
HphI GGTGA 2 cut(s) 526, 1294
Hpy166II GTNNAC 7 cut(s) 255, 306, 333, 670, 745, 991, 1027
Hpy188I TCNGA 4 cut(s) 368, 478, 933, 1115
Hpy8I GTNNAC 7 cut(s) 255, 306, 333, 670, 745, 991, 1027
HpyAV CCTTC 5 cut(s) 407, 704, 823, 1204, 1333
HpyCH4III ACNGT 4 cut(s) 373, 683, 1006, 1282
HpyCH4IV ACGT 2 cut(s) 801, 993
HpyF10VI GCNNNNNNNGC 4 cut(s) 222, 455, 1262, 1266
HpyF3I CTNAG 5 cut(s) 130, 766, 1112, 1261, 1419
HpySE526I ACGT 2 cut(s) 801, 993
KpnI GGTACC 1 cut(s) 464
KroI GCCGGC 1 cut(s) 1265
KroNI GCCGGC 1 cut(s) 1267
Ksp22I TGATCA 2 cut(s) 69, 852
KspAI GTTAAC 1 cut(s) 333
KspI CCGCGG 1 cut(s) 972
Kzo9I GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
LguI GCTCTTC 1 cut(s) 1304
LmnI GCTCC 2 cut(s) 922, 983
Lsp1109I GCAGC 3 cut(s) 10, 76, 262
LweI GCATC 6 cut(s) 35, 308, 858, 903, 943, 1296
MaeI CTAG 2 cut(s) 93, 1233
MaeII ACGT 2 cut(s) 801, 993
MaeIII GTNAC 2 cut(s) 139, 1276
MalI GATC 9 cut(s) 71, 422, 689, 734, 756, 854, 1229, 1439, 1512
MboI GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
MfeI CAATTG 1 cut(s) 1085
MflI RGATCY 3 cut(s) 420, 732, 754
MhlI GDGCHC 1 cut(s) 508
MluCI AATT 7 cut(s) 167, 495, 582, 761, 884, 1085, 1413
MlyI GAGTC 4 cut(s) 187, 1104, 1125, 1467
MmeI TCCRAC 3 cut(s) 346, 547, 684
MroNI GCCGGC 1 cut(s) 1265
MroXI GAANNNNTTC 4 cut(s) 167, 170, 812, 1487
MseI TTAA 8 cut(s) 281, 332, 378, 510, 726, 828, 945, 1412
MslI CAYNNNNRTG 1 cut(s) 1292
MspA1I CMGCKG 2 cut(s) 971, 1249
MspCI CTTAAG 1 cut(s) 827
MspI CCGG 3 cut(s) 176, 920, 1266
MspR9I CCNGG 4 cut(s) 176, 455, 1121, 1146
MunI CAATTG 1 cut(s) 1085
Mva1269I GAATGC 1 cut(s) 543
MvaI CCWGG 3 cut(s) 455, 1121, 1146
MvnI CGCG 1 cut(s) 971
MwoI GCNNNNNNNGC 4 cut(s) 222, 455, 1262, 1266
NaeI GCCGGC 1 cut(s) 1267
NciI CCSGG 1 cut(s) 176
NdeI CATATG 1 cut(s) 1344
NdeII GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
NgoMIV GCCGGC 1 cut(s) 1265
NheI GCTAGC 1 cut(s) 92
NlaIV GGNNCC 5 cut(s) 462, 734, 756, 1212, 1382
NmuCI GTSAC 1 cut(s) 1276
NspI RCATGY 1 cut(s) 1297
PagI TCATGA 1 cut(s) 1389
PceI AGGCCT 1 cut(s) 102
PciSI GCTCTTC 1 cut(s) 1304
PctI GAATGC 1 cut(s) 543
PdiI GCCGGC 1 cut(s) 1267
PdmI GAANNNNTTC 4 cut(s) 167, 170, 812, 1487
PfeI GAWTC 3 cut(s) 628, 808, 1488
PfoI TCCNGGA 1 cut(s) 1119
PkrI GCNGC 5 cut(s) 25, 91, 277, 385, 388
Ple19I CGATCG 1 cut(s) 1440
PleI GAGTC 4 cut(s) 187, 1104, 1124, 1466
PpsI GAGTC 4 cut(s) 187, 1104, 1124, 1466
PpuMI RGGWCCY 2 cut(s) 1211, 1381
PshBI ATTAAT 1 cut(s) 281
PsiI TTATAA 1 cut(s) 977
Psp5II RGGWCCY 2 cut(s) 1211, 1381
Psp6I CCWGG 3 cut(s) 453, 1119, 1144
PspFI CCCAGC 1 cut(s) 623
PspGI CCWGG 3 cut(s) 453, 1119, 1144
PspN4I GGNNCC 5 cut(s) 462, 734, 756, 1212, 1382
PspPI GGNCC 3 cut(s) 1211, 1381, 1519
PspPPI RGGWCCY 2 cut(s) 1211, 1381
PstNI CAGNNNCTG 1 cut(s) 986
PsuI RGATCY 3 cut(s) 420, 732, 754
PvuI CGATCG 1 cut(s) 1440
RsaI GTAC 2 cut(s) 305, 462
RsaNI GTAC 2 cut(s) 304, 461
RseI CAYNNNNRTG 1 cut(s) 1292
SacII CCGCGG 1 cut(s) 972
SapI GCTCTTC 1 cut(s) 1304
SaqAI TTAA 8 cut(s) 281, 332, 378, 510, 726, 828, 945, 1412
SatI GCNGC 5 cut(s) 24, 90, 276, 384, 387
Sau3AI GATC 9 cut(s) 69, 420, 687, 732, 754, 852, 1227, 1437, 1510
Sau96I GGNCC 3 cut(s) 1211, 1381, 1519
SchI GAGTC 4 cut(s) 187, 1104, 1125, 1467
ScrFI CCNGG 4 cut(s) 176, 455, 1121, 1146
SduI GDGCHC 1 cut(s) 508
SfaNI GCATC 6 cut(s) 35, 308, 858, 903, 943, 1296
Sfr303I CCGCGG 1 cut(s) 972
SgrBI CCGCGG 1 cut(s) 972
SinI GGWCC 2 cut(s) 1211, 1381
SmiMI CAYNNNNRTG 1 cut(s) 1292
SmlI CTYRAG 3 cut(s) 195, 209, 827
SmoI CTYRAG 3 cut(s) 195, 209, 827
Sse9I AATT 7 cut(s) 167, 495, 582, 761, 884, 1085, 1413
SseBI AGGCCT 1 cut(s) 102
SspMI CTAG 2 cut(s) 93, 1233
StuI AGGCCT 1 cut(s) 102
StyD4I CCNGG 4 cut(s) 174, 453, 1119, 1144
StyI CCWWGG 4 cut(s) 648, 936, 1425, 1515
TaaI ACNGT 4 cut(s) 373, 683, 1006, 1282
TaiI ACGT 2 cut(s) 804, 996
TaqI TCGA 4 cut(s) 325, 499, 690, 1440
TasI AATT 7 cut(s) 167, 495, 582, 761, 884, 1085, 1413
TauI GCSGC 2 cut(s) 386, 389
TfiI GAWTC 3 cut(s) 628, 808, 1488
Tru1I TTAA 8 cut(s) 281, 332, 378, 510, 726, 828, 945, 1412
Tru9I TTAA 8 cut(s) 281, 332, 378, 510, 726, 828, 945, 1412
TscAI CASTG 1 cut(s) 895
TseFI GTSAC 1 cut(s) 1276
TseI GCWGC 3 cut(s) 23, 89, 275
Tsp45I GTSAC 1 cut(s) 1276
TspDTI ATGAA 3 cut(s) 252, 1361, 1480
TspGWI ACGGA 1 cut(s) 725
TspRI CASTG 1 cut(s) 895
Vha464I CTTAAG 1 cut(s) 827
VpaK11BI GGWCC 2 cut(s) 1211, 1381
VspI ATTAAT 1 cut(s) 281
XapI RAATTY 3 cut(s) 167, 495, 761
XceI RCATGY 1 cut(s) 1297
XcmI CCANNNNNNNNNTGG 2 cut(s) 887, 1349
XmiI GTMKAC 1 cut(s) 669
XmnI GAANNNNTTC 4 cut(s) 167, 170, 812, 1487
XspI CTAG 2 cut(s) 93, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.