Rorug04G0121900
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
19322463 .. 19328570
6108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0121900.1

Sequence Viewer

Length: 3267 bp
ATGTGTAATAAAGGAATTGCATGCTTGAGTGAGTCGGATAACCCAATTGATCAGCAGCAGCAACAGGCTGTCTACTTGATGGAGAGCCCTTCCACTACCCCTCACTTTGGCTCTAATTCCAGCCCTGTTTTGAATGAGGACAATCCCCCTCGTGTTAAATTTCTGTGTAGTTTCTCCGGTAGCATATTGCCCCGGCCGCAGGATGGGAGGCTCCGATATGTCGGTGGGGAGACACGGATTGTTAGTGTTCCGCGAGACATTAGGTATGAGGAGTTGATGAGCAAGATGAGGGAGCTTTATGAAGGGGCGGCGGTGCTTAAGTACCAGCAACCGGATGAGGACCTTGACGCCCTTGTCTCGGTTGTGAATGACGATGATGTGACCAACATGATGGAAGAGTATGATAAGTTGGGGTCGGGTGATGGTTTCACCAGGCTCAGGATTTTTTTGTTTTCGTATCCCGACCAAGATGGTGGTTCCTCACACTATGACGGGGATGAAAGGGATCATGAGAGGAGGTATGTTGATGCTCTCAATAACTTAAATGATGGTTCCGAATTTAGGAAGCAGCATTTAGAGTCCCCTGTTATCACTTCAGTTGATGATCTCCATGGAGTTGAACAGTTCTTTAGTCCAATGAGTCTCGAGGGTGGCCTCCATAGCCAGAGAAACGAGATATCCATGTCTCATTATAACCTGCATCGCCTCAAAATACCTCATATAGGTTCAGGGCAACACCATCAGCCCATTAGCCAAAGGTATAACGACATGGAAGCTCCGTGGAGTCCTGCATACTATTCTCCTAGGCATCATGGGCACCTTGATCCAAGACCAATGGCAGAGTTTCCAACTTCTCCTACCTCTGCACGGTACCGTATGCCATTTGCAGATGTACCTGATAAATGTTCAGATAGAATGCCTGAAGAATATGCACGGCCGCCATTGAATCATCAGCCTGGATATGAACACCAACCACAGTATTCTGATAATGCTGTATGGCTTCCAAGTGGAGCTATATCTGGTGAGAAGTCAGGCTTTCCAGGTAACATTTTTCATGGAAACAATGTTCTCGAAGGAAACAGTGTCTCTGAACACTGTCGGGTATGTTTCCAAAGAAACCAACCACAATTCGAGCAACCCAACATGGTCAATGGATTTCATCAGGTTGCTAATACATGTGCTGATTGCCGTCCAAAGTTGCACCATGGTTACACAACTGAGCAGAATAACGATTCTTCACCTCTATATAATGAGAATCAAAATCAATGGGTTCCACACCGTTTGAATAGCCGGGCTGAGGAAGCAAGATCACATGTCTCTGGAACTGGAAAATTGAACGATCACTACATTGTAGATGGTCCTGGCATGAATTTGCCTCTTGTTCATAATAATATGGTGGATGTCCATCACGTCTCTACCAATTTTGTGCATCAACGAGCTGGGTCTGAGATGGGAAATGACGTGTTTCATGACCGACCTGTGGCTGGCCCACCCCACGTACACATTCCTCCTGTAGAAGACCGTGGCGTTCCATATGGAAATCTTCCTTATGCTTACGGAGGAGATAATGTTTACCCAGTGTCTCATGGACATGCACCGGGACATGGAGTATGGAGAAATGTTCATAGCACATTGCATCCTGTGCCCCCTTACGATGCATCCAATTCAGCTCCCCAAATTAATGGTTCTGTCAATCCAGGATATCTCAGACACGAGGGTAGTCCAAGATTTTGCATTGCAGCAGACAATCAGAATCTTTGGGTTGAATCATCGCAGAAGGTGTTAGGTTTTGACGGAAGATCTGTTTCAGACTATTCTTATGGCCAAGCTTTGAACTTGAACCCTAACACACTTCCTCATGAAAATCATCGTCAATTTCCTCCAGAACTCATTCAACCCACACCTGATATAGTAAGTTCTGCTACCCCTTTGGACGGCGTCACTAGAGTTATGTTGGATACAGAGAGTTTACCTAGAGAAGGAAGGGAGGTGATGGATGGAGAGAAGGTTGAGAACTCTGATATGCAGGTTATAAATAAAAAAGAATTGGGTGATATAAGTGAAGTGGTGCCTCTCGAGTTAGTAAATTCAAATTGTCCCAAACTCGCAGAAGAAAGTGGTGACAAGGATCATTCTACTCCTGAAATTTCAAAGCTTTCAGCTAACAATTTGAGTTTTGTGCCTGAGTTGATTGCTTCGGTAAAAAAGGTGGCCATATATGGGGTAGAGGAGGTAAAAGCAAAAGTTGAGGAAAGTACTGATTCTCAGAAGAGTAATCCGATTGCCAATGAAGCTGCAACAAACAGTTTGGAACCAGTGAACACTCCTGGAGATGGCGAAGTGGATTCTGATAGTGAGAATCTGAATAATTCCAAAATTGAGCCAACAAAGGCCGAGGCAGAAGCTATTTCCAAGGGATTGCAGACAATAAAGAATGATGATCTTGAGGAGATCCGAGAATTAGGTTCTGGAACATATGGGGCTGTTTTTCATGGAAAGTGGAAGGGTTCAGATGTAGCAATAAAGAGAATAAAAGCCAGCTGTTTTGCTGGCCGACCTTCTGAAAGAGAGCGTTTGATTGCTGATTTCTGGAAGGAGGCTTTGATACTTAGTTCATTGCATCATCCAAATGTTGTTTCTTTCTATGGTATTGTGCGTGATGGTCCTGATGGCTCTTTAGCAACTGTTACTGAATTCATGGTTAATGGATCTCTGAAACAGTTTTTGCAGAAAAAAGACAGAACAATTGATCGTCGTAAACGATTGATTATAGCTATGGATGCTGCATTCGGGATGGAGTATCTGCATGGAAAAAATATAGTACATTTTGATTTGAAGTGTGAAAATCTGTTGGTAAATATGAGAGATCCACAGCGTCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAAGTGAAACAACAGACATTAGTGTCTGGAGGTGTTCGTGGAACTTTGCCCTGGATGGCACCTGAGCTTCTTAGTGGGAAAAGTCATATGGTGACAGAGAAGATTGATGTTTACTCATTTGGGATTGTTATGTGGGAACTGCTTACTGGCGATGAACCCTATACAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAACACTTTACGTCCTCAAATTCCAACATGGTGTGATCCTGAATGGAAGTCTTTGATGGAAAGTTGTTGGGGCTCTGAGCCTGCTCAGAGGCCATCATTTTCTGAGATCTCTCAGAAGCTGAGGAATATGGCTGCTGCAATGAATGTGAAATAG

Protein Analysis

1088

Amino Acids

121.25

Weight (kDa)

5.5

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 68 - 151 1.2e-17 PB1 domain
Pkinase PF00069 816 - 1076 4.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 817 - 1078 4e-62 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 693, 2033
AasI GACNNNNNNGTC 2 cut(s) 353, 2932
Acc36I ACCTGC 2 cut(s) 705, 2017
Acc65I GGTACC 1 cut(s) 870
AccB1I GGYRCC 4 cut(s) 816, 870, 2068, 2968
AccI GTMKAC 1 cut(s) 72
AccII CGCG 1 cut(s) 253
AciI CCGC 5 cut(s) 197, 251, 308, 311, 938
AclWI GGATC 7 cut(s) 513, 818, 2136, 2446, 2716, 2861, 3143
AcoI YGGCCR 5 cut(s) 194, 935, 1822, 2211, 2551
AcsI RAATTY 7 cut(s) 158, 557, 1369, 2086, 2145, 2693, 3132
AcuI CTGAAG 2 cut(s) 579, 942
AcyI GRCGYC 2 cut(s) 348, 1938
AfaI GTAC 6 cut(s) 323, 872, 894, 1500, 2257, 2823
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 3 cut(s) 1175, 1312, 1461
AjiI CACGTC 2 cut(s) 1411, 1462
AjnI CCWGG 7 cut(s) 431, 955, 1039, 1360, 1696, 2326, 2960
AjuI GAANNNNNNNTTGG 2 cut(s) 2620, 2652
AloI GAACNNNNNNTCC 2 cut(s) 1050, 1082
Alw26I GTCTC 9 cut(s) 224, 249, 361, 647, 690, 1090, 1321, 1417, 1587
AlwI GGATC 7 cut(s) 513, 818, 2136, 2446, 2716, 2861, 3143
AlwNI CAGNNNCTG 1 cut(s) 3232
Ama87I CYCGRG 2 cut(s) 644, 2075
AoxI GGCC 9 cut(s) 194, 652, 935, 1486, 1822, 2211, 2391, 2551, 3203
ApeKI GCWGC 8 cut(s) 55, 58, 568, 1739, 2294, 2783, 3245, 3248
ApoI RAATTY 7 cut(s) 158, 557, 1369, 2086, 2145, 2693, 3132
AseI ATTAAT 1 cut(s) 1680
Asp700I GAANNNNTTC 1 cut(s) 1890
Asp718I GGTACC 1 cut(s) 870
AspA2I CCTAGG 1 cut(s) 803
AspS9I GGNCC 4 cut(s) 340, 1358, 1487, 2663
AsuC2I CCSGG 3 cut(s) 193, 1292, 1599
AsuHPI GGTGA 9 cut(s) 421, 431, 1034, 1230, 2002, 2063, 2132, 2906, 3013
AvaI CYCGRG 2 cut(s) 644, 2075
AvaII GGWCC 3 cut(s) 340, 1358, 2663
AvrII CCTAGG 1 cut(s) 803
BaeGI GKGCMC 2 cut(s) 819, 1647
BalI TGGCCA 2 cut(s) 1824, 2213
BanI GGYRCC 4 cut(s) 816, 870, 2068, 2968
BanII GRGCYC 2 cut(s) 89, 3188
BauI CACGAG 2 cut(s) 150, 1712
BbsI GAAGAC 1 cut(s) 1524
BbvCI CCTCAGC 2 cut(s) 1296, 3233
BbvI GCAGC 8 cut(s) 67, 70, 580, 1751, 2281, 2770, 3232, 3235
BceAI ACGGC 3 cut(s) 950, 1173, 1951
BciT130I CCWGG 7 cut(s) 433, 957, 1041, 1362, 1698, 2328, 2962
BciVI GTATCC 2 cut(s) 468, 1951
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 3 cut(s) 193, 1292, 1599
BcoDI GTCTC 9 cut(s) 224, 249, 361, 647, 690, 1090, 1321, 1417, 1587
BfaI CTAG 3 cut(s) 804, 1944, 1974
BfmI CTRYAG 1 cut(s) 1512
BfrI CTTAAG 1 cut(s) 317
BfuAI ACCTGC 2 cut(s) 705, 2017
BfuI GTATCC 2 cut(s) 468, 1951
BglII AGATCT 2 cut(s) 1799, 3219
BlnI CCTAGG 1 cut(s) 803
BmcAI AGTACT 1 cut(s) 2257
Bme18I GGWCC 3 cut(s) 340, 1358, 2663
BmeT110I CYCGRG 2 cut(s) 644, 2075
BmgBI CACGTC 2 cut(s) 1411, 1462
BmgT120I GGNCC 4 cut(s) 340, 1358, 1487, 2663
BmiI GGNNCC 9 cut(s) 212, 478, 553, 818, 872, 1272, 2070, 2313, 2970
BmrI ACTGGG 1 cut(s) 1571
BmsI GCATC 9 cut(s) 517, 709, 817, 1438, 1645, 1645, 1667, 2629, 2770
BmuI ACTGGG 1 cut(s) 1571
BpiI GAAGAC 1 cut(s) 1524
BpmI CTGGAG 3 cut(s) 1866, 2349, 2958
Bpu10I CCTNAGC 4 cut(s) 437, 1296, 2973, 3233
BpuEI CTTGAG 2 cut(s) 46, 2465
BpuMI CCSGG 3 cut(s) 193, 1292, 1599
BsaAI YACGTR 1 cut(s) 1498
BsaBI GATNNNNATC 1 cut(s) 1404
BsaHI GRCGYC 2 cut(s) 348, 1938
BsaJI CCNNGG 9 cut(s) 191, 610, 779, 803, 1204, 1522, 2394, 2412, 2960
BsaWI WCCGGW 2 cut(s) 176, 331
BsaXI ACNNNNNCTCC 6 cut(s) 1554, 1584, 1992, 2022, 3093, 3123
Bse1I ACTGG 4 cut(s) 1330, 1577, 2315, 3061
Bse3DI GCAATG 4 cut(s) 1631, 1734, 2615, 3258
Bse8I GATNNNNATC 1 cut(s) 1404
BseBI CCWGG 7 cut(s) 433, 957, 1041, 1362, 1698, 2328, 2962
BseDI CCNNGG 9 cut(s) 191, 610, 779, 803, 1204, 1522, 2394, 2412, 2960
BseJI GATNNNNATC 1 cut(s) 1404
BseMI GCAATG 4 cut(s) 1631, 1734, 2615, 3258
BseNI ACTGG 4 cut(s) 1330, 1577, 2315, 3061
BseRI GAGGAG 5 cut(s) 284, 529, 1575, 2243, 2462
BseSI GKGCMC 2 cut(s) 819, 1647
BseX3I CGGCCG 2 cut(s) 194, 935
BseXI GCAGC 8 cut(s) 67, 70, 580, 1751, 2281, 2770, 3232, 3235
BseYI CCCAGC 1 cut(s) 1439
BsgI GTGCAG 1 cut(s) 849
Bsh1236I CGCG 1 cut(s) 253
Bsh1285I CGRYCG 2 cut(s) 197, 938
BshFI GGCC 9 cut(s) 196, 654, 937, 1488, 1824, 2213, 2393, 2553, 3205
BshNI GGYRCC 4 cut(s) 816, 870, 2068, 2968
BsiEI CGRYCG 2 cut(s) 197, 938
BsiHKCI CYCGRG 2 cut(s) 644, 2075
BsiSI CCGG 5 cut(s) 177, 193, 332, 1291, 1598
BslFI GGGAC 3 cut(s) 565, 1614, 2082
BsmAI GTCTC 9 cut(s) 224, 249, 361, 647, 690, 1090, 1321, 1417, 1587
BsmBI CGTCTC 1 cut(s) 1417
BsmFI GGGAC 3 cut(s) 565, 1614, 2082
BsmI GAATGC 2 cut(s) 921, 2786
BsnI GGCC 9 cut(s) 196, 654, 937, 1488, 1824, 2213, 2393, 2553, 3205
BsoBI CYCGRG 2 cut(s) 644, 2075
Bsp1286I GDGCHC 4 cut(s) 89, 819, 1647, 3188
Bsp19I CCATGG 2 cut(s) 610, 1204
BspACI CCGC 5 cut(s) 197, 251, 308, 311, 938
BspANI GGCC 9 cut(s) 196, 654, 937, 1488, 1824, 2213, 2393, 2553, 3205
BspFNI CGCG 1 cut(s) 253
BspHI TCATGA 3 cut(s) 508, 1468, 1858
BspLI GGNNCC 9 cut(s) 212, 478, 553, 818, 872, 1272, 2070, 2313, 2970
BspMI ACCTGC 2 cut(s) 705, 2017
BspPI GGATC 7 cut(s) 513, 818, 2136, 2446, 2716, 2861, 3143
BspT107I GGYRCC 4 cut(s) 816, 870, 2068, 2968
BspTI CTTAAG 1 cut(s) 317
BsrDI GCAATG 4 cut(s) 1631, 1734, 2615, 3258
BsrI ACTGG 4 cut(s) 1330, 1577, 2315, 3061
BssECI CCNNGG 9 cut(s) 191, 610, 779, 803, 1204, 1522, 2394, 2412, 2960
BssNI GRCGYC 2 cut(s) 348, 1938
BssSI CACGAG 2 cut(s) 150, 1712
BssT1I CCWWGG 4 cut(s) 610, 803, 1204, 2412
Bst2BI CACGAG 2 cut(s) 150, 1712
Bst2UI CCWGG 7 cut(s) 433, 957, 1041, 1362, 1698, 2328, 2962
Bst6I CTCTTC 2 cut(s) 390, 2264
BstACI GRCGYC 2 cut(s) 348, 1938
BstAFI CTTAAG 1 cut(s) 317
BstAPI GCANNNNNTGC 1 cut(s) 1642
BstBAI YACGTR 1 cut(s) 1498
BstC8I GCNNGC 5 cut(s) 22, 1486, 2539, 2551, 3195
BstDSI CCRYGG 4 cut(s) 610, 779, 1204, 1522
BstENI CCTNNNNNAGG 2 cut(s) 720, 1977
BstFNI CGCG 1 cut(s) 253
BstMAI GTCTC 9 cut(s) 224, 249, 361, 647, 690, 1090, 1321, 1417, 1587
BstMCI CGRYCG 2 cut(s) 197, 938
BstMWI GCNNNNNNNGC 7 cut(s) 196, 660, 814, 1301, 1642, 2291, 2780
BstNI CCWGG 7 cut(s) 433, 957, 1041, 1362, 1698, 2328, 2962
BstNSI RCATGY 4 cut(s) 24, 1179, 1316, 1595
BstSFI CTRYAG 1 cut(s) 1512
BstSLI GKGCMC 2 cut(s) 819, 1647
BstUI CGCG 1 cut(s) 253
BstV1I GCAGC 8 cut(s) 67, 70, 580, 1751, 2281, 2770, 3232, 3235
BstV2I GAAGAC 1 cut(s) 1524
BstX2I RGATCY 5 cut(s) 1799, 2451, 2708, 2866, 3219
BstXI CCANNNNNNTGG 3 cut(s) 391, 473, 1682
BstYI RGATCY 5 cut(s) 1799, 2451, 2708, 2866, 3219
BstZI CGGCCG 2 cut(s) 194, 935
BsuI GTATCC 2 cut(s) 468, 1951
BsuRI GGCC 9 cut(s) 196, 654, 937, 1488, 1824, 2213, 2393, 2553, 3205
BtgI CCRYGG 4 cut(s) 610, 779, 1204, 1522
BtgZI GCGATG 3 cut(s) 686, 1755, 3075
BtrI CACGTC 2 cut(s) 1411, 1462
BtsIMutI CAGTG 4 cut(s) 1087, 1093, 1584, 2322
BveI ACCTGC 2 cut(s) 705, 2017
Cac8I GCNNGC 5 cut(s) 22, 1486, 2539, 2551, 3195
CaiI CAGNNNCTG 1 cut(s) 3232
CciI TCATGA 3 cut(s) 508, 1468, 1858
Cfr13I GGNCC 4 cut(s) 340, 1358, 1487, 2663
CseI GACGC 3 cut(s) 356, 1927, 2864
Csp6I GTAC 6 cut(s) 322, 871, 893, 1499, 2256, 2822
CspCI CAANNNNNGTGG 2 cut(s) 1263, 1298
CviQI GTAC 6 cut(s) 322, 871, 893, 1499, 2256, 2822
DrdI GACNNNNNNGTC 2 cut(s) 353, 2932
DseDI GACNNNNNNGTC 2 cut(s) 353, 2932
EaeI YGGCCR 5 cut(s) 194, 935, 1822, 2211, 2551
EagI CGGCCG 2 cut(s) 194, 935
Eam1104I CTCTTC 2 cut(s) 390, 2264
EarI CTCTTC 2 cut(s) 390, 2264
EclXI CGGCCG 2 cut(s) 194, 935
Eco130I CCWWGG 4 cut(s) 610, 803, 1204, 2412
Eco24I GRGCYC 2 cut(s) 89, 3188
Eco32I GATATC 2 cut(s) 678, 1703
Eco47I GGWCC 3 cut(s) 340, 1358, 2663
Eco52I CGGCCG 2 cut(s) 194, 935
Eco57I CTGAAG 2 cut(s) 579, 942
Eco88I CYCGRG 2 cut(s) 644, 2075
EcoNI CCTNNNNNAGG 2 cut(s) 720, 1977
EcoO109I RGGNCCY 1 cut(s) 340
EcoRI GAATTC 1 cut(s) 2693
EcoRII CCWGG 7 cut(s) 431, 955, 1039, 1360, 1696, 2326, 2960
EcoRV GATATC 2 cut(s) 678, 1703
EcoT14I CCWWGG 4 cut(s) 610, 803, 1204, 2412
EcoT22I ATGCAT 2 cut(s) 1660, 3084
EcoT38I GRGCYC 2 cut(s) 89, 3188
ErhI CCWWGG 4 cut(s) 610, 803, 1204, 2412
Esp3I CGTCTC 1 cut(s) 1417
FalI AAGNNNNNCTT 2 cut(s) 1019, 1051
FaqI GGGAC 3 cut(s) 565, 1614, 2082
FauNDI CATATG 3 cut(s) 1534, 2476, 2997
FbaI TGATCA 1 cut(s) 49
FblI GTMKAC 1 cut(s) 72
FriOI GRGCYC 2 cut(s) 89, 3188
FspBI CTAG 3 cut(s) 804, 1944, 1974
GsaI CCCAGC 1 cut(s) 1443
GsuI CTGGAG 3 cut(s) 1866, 2349, 2958
HaeIII GGCC 9 cut(s) 196, 654, 937, 1488, 1824, 2213, 2393, 2553, 3205
HapII CCGG 5 cut(s) 177, 193, 332, 1291, 1598
HgaI GACGC 3 cut(s) 356, 1927, 2864
Hin1I GRCGYC 2 cut(s) 348, 1938
HindIII AAGCTT 2 cut(s) 1827, 2153
HpaII CCGG 5 cut(s) 177, 193, 332, 1291, 1598
HphI GGTGA 9 cut(s) 421, 431, 1034, 1230, 2002, 2063, 2132, 2906, 3013
Hpy166II GTNNAC 8 cut(s) 73, 1501, 1573, 1970, 2320, 2759, 3022, 3112
Hpy8I GTNNAC 8 cut(s) 73, 1501, 1573, 1970, 2320, 2759, 3022, 3112
Hpy99I CGWCG 1 cut(s) 2757
HpyCH4IV ACGT 4 cut(s) 1410, 1461, 1497, 3124
HpyF10VI GCNNNNNNNGC 7 cut(s) 196, 660, 814, 1301, 1642, 2291, 2780
HpySE526I ACGT 4 cut(s) 1410, 1461, 1497, 3124
Hsp92I GRCGYC 2 cut(s) 348, 1938
KpnI GGTACC 1 cut(s) 874
Ksp22I TGATCA 1 cut(s) 49
LmnI GCTCC 5 cut(s) 216, 292, 781, 1010, 1675
Lsp1109I GCAGC 8 cut(s) 67, 70, 580, 1751, 2281, 2770, 3232, 3235
LweI GCATC 9 cut(s) 517, 709, 817, 1438, 1645, 1645, 1667, 2629, 2770
MaeI CTAG 3 cut(s) 804, 1944, 1974
MaeII ACGT 4 cut(s) 1410, 1461, 1497, 3124
MaeIII GTNAC 7 cut(s) 379, 1043, 1208, 1939, 2120, 2686, 3001
MboII GAAGA 9 cut(s) 407, 935, 1227, 1529, 1535, 1809, 2123, 2281, 3022
MfeI CAATTG 2 cut(s) 45, 2745
MflI RGATCY 5 cut(s) 1799, 2451, 2708, 2866, 3219
MhlI GDGCHC 4 cut(s) 89, 819, 1647, 3188
MlsI TGGCCA 2 cut(s) 1824, 2213
MluNI TGGCCA 2 cut(s) 1824, 2213
MlyI GAGTC 4 cut(s) 41, 587, 649, 793
MmeI TCCRAC 4 cut(s) 15, 872, 1935, 3161
Mox20I TGGCCA 2 cut(s) 1824, 2213
Mph1103I ATGCAT 2 cut(s) 1660, 3084
MroXI GAANNNNTTC 1 cut(s) 1890
MscI TGGCCA 2 cut(s) 1824, 2213
MseI TTAA 5 cut(s) 156, 318, 542, 1680, 2703
MslI CAYNNNNRTG 2 cut(s) 1590, 2628
Msp20I TGGCCA 2 cut(s) 1824, 2213
MspA1I CMGCKG 1 cut(s) 2541
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 5 cut(s) 177, 193, 332, 1291, 1598
MunI CAATTG 2 cut(s) 45, 2745
Mva1269I GAATGC 2 cut(s) 921, 2786
MvaI CCWGG 7 cut(s) 433, 957, 1041, 1362, 1698, 2328, 2962
MvnI CGCG 1 cut(s) 253
MwoI GCNNNNNNNGC 7 cut(s) 196, 660, 814, 1301, 1642, 2291, 2780
NciI CCSGG 3 cut(s) 193, 1292, 1599
NcoI CCATGG 2 cut(s) 610, 1204
NdeI CATATG 3 cut(s) 1534, 2476, 2997
NlaIV GGNNCC 9 cut(s) 212, 478, 553, 818, 872, 1272, 2070, 2313, 2970
NmeAIII GCCGAG 1 cut(s) 2419
NmuCI GTSAC 4 cut(s) 379, 1939, 2120, 3001
NsiI ATGCAT 2 cut(s) 1660, 3084
NspI RCATGY 4 cut(s) 24, 1179, 1316, 1595
PaeI GCATGC 1 cut(s) 24
PaeR7I CTCGAG 2 cut(s) 644, 2075
PagI TCATGA 3 cut(s) 508, 1468, 1858
PciI ACATGT 2 cut(s) 1175, 1312
PcsI WCGNNNNNNNCGW 1 cut(s) 2758
PctI GAATGC 2 cut(s) 921, 2786
PdmI GAANNNNTTC 1 cut(s) 1890
PfeI GAWTC 8 cut(s) 946, 1232, 1255, 1753, 1766, 2261, 2345, 2359
PflFI GACNNNGTC 1 cut(s) 1937
PfoI TCCNGGA 2 cut(s) 1696, 2326
PleI GAGTC 4 cut(s) 40, 586, 648, 792
PpsI GAGTC 4 cut(s) 40, 586, 648, 792
Ppu21I YACGTR 1 cut(s) 1498
PpuMI RGGWCCY 1 cut(s) 340
PscI ACATGT 2 cut(s) 1175, 1312
PshBI ATTAAT 1 cut(s) 1680
PsiI TTATAA 2 cut(s) 693, 2033
Psp5II RGGWCCY 1 cut(s) 340
Psp6I CCWGG 7 cut(s) 431, 955, 1039, 1360, 1696, 2326, 2960
PspFI CCCAGC 1 cut(s) 1439
PspGI CCWGG 7 cut(s) 431, 955, 1039, 1360, 1696, 2326, 2960
PspN4I GGNNCC 9 cut(s) 212, 478, 553, 818, 872, 1272, 2070, 2313, 2970
PspPI GGNCC 4 cut(s) 340, 1358, 1487, 2663
PspPPI RGGWCCY 1 cut(s) 340
PsrI GAACNNNNNNTAC 2 cut(s) 1328, 1360
PstNI CAGNNNCTG 1 cut(s) 3232
PsuI RGATCY 5 cut(s) 1799, 2451, 2708, 2866, 3219
PsyI GACNNNGTC 1 cut(s) 1937
PvuII CAGCTG 1 cut(s) 2541
RsaI GTAC 6 cut(s) 323, 872, 894, 1500, 2257, 2823
RsaNI GTAC 6 cut(s) 322, 871, 893, 1499, 2256, 2822
RseI CAYNNNNRTG 2 cut(s) 1590, 2628
SaqAI TTAA 5 cut(s) 156, 318, 542, 1680, 2703
Sau96I GGNCC 4 cut(s) 340, 1358, 1487, 2663
ScaI AGTACT 1 cut(s) 2257
SchI GAGTC 4 cut(s) 41, 587, 649, 793
SduI GDGCHC 4 cut(s) 89, 819, 1647, 3188
SfaNI GCATC 9 cut(s) 517, 709, 817, 1438, 1645, 1645, 1667, 2629, 2770
SfcI CTRYAG 1 cut(s) 1512
Sfr274I CTCGAG 2 cut(s) 644, 2075
SinI GGWCC 3 cut(s) 340, 1358, 2663
SlaI CTCGAG 2 cut(s) 644, 2075
SmiMI CAYNNNNRTG 2 cut(s) 1590, 2628
SmlI CTYRAG 5 cut(s) 25, 317, 644, 2075, 2444
SmoI CTYRAG 5 cut(s) 25, 317, 644, 2075, 2444
SphI GCATGC 1 cut(s) 24
SsiI CCGC 5 cut(s) 197, 251, 308, 311, 938
SspMI CTAG 3 cut(s) 804, 1944, 1974
StyI CCWWGG 4 cut(s) 610, 803, 1204, 2412
TaiI ACGT 4 cut(s) 1413, 1464, 1500, 3127
TaqI TCGA 4 cut(s) 645, 1071, 1131, 2076
TaqII GACCGA 1 cut(s) 1488
TatI WGTACW 2 cut(s) 2255, 2821
TauI GCSGC 3 cut(s) 199, 311, 940
TfiI GAWTC 8 cut(s) 946, 1232, 1255, 1753, 1766, 2261, 2345, 2359
Tru1I TTAA 5 cut(s) 156, 318, 542, 1680, 2703
Tru9I TTAA 5 cut(s) 156, 318, 542, 1680, 2703
TscAI CASTG 4 cut(s) 1087, 1100, 1584, 2322
TseFI GTSAC 4 cut(s) 379, 1939, 2120, 3001
TseI GCWGC 8 cut(s) 55, 58, 568, 1739, 2294, 2783, 3245, 3248
Tsp45I GTSAC 4 cut(s) 379, 1939, 2120, 3001
TspGWI ACGGA 4 cut(s) 250, 768, 1572, 1809
TspRI CASTG 4 cut(s) 1087, 1100, 1584, 2322
Tth111I GACNNNGTC 1 cut(s) 1937
Vha464I CTTAAG 1 cut(s) 317
VpaK11BI GGWCC 3 cut(s) 340, 1358, 2663
VspI ATTAAT 1 cut(s) 1680
XagI CCTNNNNNAGG 2 cut(s) 720, 1977
XapI RAATTY 7 cut(s) 158, 557, 1369, 2086, 2145, 2693, 3132
XceI RCATGY 4 cut(s) 24, 1179, 1316, 1595
XhoI CTCGAG 2 cut(s) 644, 2075
XmaJI CCTAGG 1 cut(s) 803
XmiI GTMKAC 1 cut(s) 72
XmnI GAANNNNTTC 1 cut(s) 1890
XspI CTAG 3 cut(s) 804, 1944, 1974
ZrmI AGTACT 1 cut(s) 2257
Zsp2I ATGCAT 2 cut(s) 1660, 3084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.