Rh4BG203700
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
34967012 .. 34969540
2529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG203700.1

Sequence Viewer

Length: 1116 bp
ATGGTTTTGCATATGGTTTTCTGTGTACAAAAGGCGGTACCTCTTTTCCTTTCCGAGGTTGCACCCCCAAGGATTCGTGGGGCTCTTAACATACTCTTCCAGCTCAATGTCACCGTTGGACTTCTCTTAGCAAACGTAATCAATTATGGAAGTTCCAAGGTGACAGGGGGGTGGGGATGGAGGTTATCATTGGGTTTGGCTGGCGTTCCGTCAGTTCTGCTAACCATAGGGGCTATAGTTGTGGTGGATACTCCTAACAGTTTGATTGAACGAGGCAAGTTGGAGCAAGGAAAATCAGTTCTCAAAAGAATTCGCGGTGTTGAAAACGTTGATCCAGAGTTCTTAGAGCTTCTAGAGGCAAGTCGCATGGCTAAAGAAGTAAAGCATCCCTTCAGAAATCTGCTCAAGCGTCGGAATAGGCCGCAACTAATTATTACAGTGTTTTTGCAGTTCTTCCAGCAATTCACTGGCATTAACGCAATCAATTTCTACGCTCCAGTTTTGTTCCAGACCTTGGGATTTAAAAGTGACGCTTCACTTTACTCGGCTGTTATAACAGGAAGCTGTATGGTGGTTGGAGCCATTATATCAATCTACTTGGCAGATAGAGTTGGCCGCCGCGTGCTCTTGCTAGAAGGTGCTATCCAAATGTTGGTTTCTCATATTGGTGTTACAATAATACTTGGACTTAAACTGAAAGAAACTACAAGCAGCCTTGACCGCGGATTGGCAATTCTGGTGGTGGTGTTGGTGTGCTCCTTTGTGGGGTCGTTCGGATGGTCTTGGGGACCTCTTGCCTGGCTGATAGCTAGTGAGATATTTCCGCTAGAGGCCCGCTCCGCGGGGCAGAGTGTGACCGTCGGTGTCAACATGTTCTTTACGTTCGTCATAGCACAAGCCTTCCTCTCAATGCTTTGCCACCTGAAGTTTGGCATATTCTTATTTTTCGCAGCTTTTGTCTTCATCATGTTTTTGTTTGTGCTCTTCTTACTTCCCGAGACCAAGGGTGTGCCTATTGAAGAGATGACGGACGTTGTCTGGAGACAACATTGGTTTTGGAGGAGATATATTGAGGACGATTTTGAAGATGATCCCAAGCCCCAGGGGTATGCTTGA

Protein Analysis

371

Amino Acids

41.39

Weight (kDa)

9.17

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 10 - 344 1.2e-91 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 554
Acc65I GGTACC 1 cut(s) 37
AccB1I GGYRCC 1 cut(s) 37
AccB7I CCANNNNNTGG 2 cut(s) 514, 652
AccBSI CCGCTC 1 cut(s) 837
AccII CGCG 4 cut(s) 315, 621, 723, 842
AclI AACGTT 1 cut(s) 327
AclWI GGATC 2 cut(s) 326, 1085
AcoI YGGCCR 1 cut(s) 613
AcsI RAATTY 1 cut(s) 309
AcuI CTGAAG 2 cut(s) 376, 944
AfaI GTAC 2 cut(s) 27, 39
AfiI CCNNNNNNNGG 6 cut(s) 55, 514, 652, 727, 765, 841
AflIII ACRYGT 1 cut(s) 870
AgsI TTSAA 4 cut(s) 269, 323, 1019, 1085
AjnI CCWGG 2 cut(s) 797, 1101
AloI GAACNNNNNNTCC 2 cut(s) 282, 314
AluBI AGCT 5 cut(s) 103, 349, 564, 809, 953
AluI AGCT 5 cut(s) 103, 349, 564, 809, 953
Alw21I GWGCWC 3 cut(s) 627, 758, 984
Alw26I GTCTC 2 cut(s) 992, 1036
AlwI GGATC 2 cut(s) 326, 1085
Ama87I CYCGRG 1 cut(s) 995
AoxI GGCC 3 cut(s) 419, 613, 831
ApeKI GCWGC 2 cut(s) 711, 950
ApoI RAATTY 1 cut(s) 309
Asp718I GGTACC 1 cut(s) 37
AspS9I GGNCC 2 cut(s) 788, 832
AsuHPI GGTGA 2 cut(s) 103, 172
AvaI CYCGRG 1 cut(s) 995
AvaII GGWCC 1 cut(s) 788
BanI GGYRCC 1 cut(s) 37
BanII GRGCYC 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 952
Bbv12I GWGCWC 3 cut(s) 627, 758, 984
BbvI GCAGC 2 cut(s) 723, 962
BccI CCATC 2 cut(s) 171, 771
BciT130I CCWGG 2 cut(s) 799, 1103
BciVI GTATCC 1 cut(s) 241
BcoDI GTCTC 2 cut(s) 992, 1036
BfaI CTAG 4 cut(s) 353, 632, 810, 827
BfmI CTRYAG 1 cut(s) 234
BfuI GTATCC 1 cut(s) 241
BisI GCNGC 5 cut(s) 422, 616, 619, 712, 951
BlsI GCNGC 5 cut(s) 423, 617, 620, 713, 952
Bme1390I CCNGG 2 cut(s) 799, 1103
Bme18I GGWCC 1 cut(s) 788
BmeT110I CYCGRG 1 cut(s) 995
BmgT120I GGNCC 2 cut(s) 788, 832
BmiI GGNNCC 3 cut(s) 39, 580, 789
BmrFI CCNGG 2 cut(s) 799, 1103
BmsI GCATC 1 cut(s) 394
BpiI GAAGAC 1 cut(s) 952
BplI GAGNNNNNCTC 2 cut(s) 821, 853
BpmI CTGGAG 2 cut(s) 480, 1060
BpuEI CTTGAG 1 cut(s) 389
BsaI GGTCTC 1 cut(s) 992
BsaJI CCNNGG 9 cut(s) 54, 68, 156, 513, 721, 840, 1002, 1101, 1102
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 514, 652, 727, 765, 841
Bse1I ACTGG 2 cut(s) 472, 497
BseBI CCWGG 2 cut(s) 799, 1103
BseDI CCNNGG 9 cut(s) 54, 68, 156, 513, 721, 840, 1002, 1101, 1102
BseGI GGATG 3 cut(s) 182, 385, 782
BseLI CCNNNNNNNGG 6 cut(s) 55, 514, 652, 727, 765, 841
BseNI ACTGG 2 cut(s) 472, 497
BseRI GAGGAG 1 cut(s) 1075
BseXI GCAGC 2 cut(s) 723, 962
Bsh1236I CGCG 4 cut(s) 315, 621, 723, 842
BshFI GGCC 3 cut(s) 421, 615, 833
BshNI GGYRCC 1 cut(s) 37
BsiHKAI GWGCWC 3 cut(s) 627, 758, 984
BsiHKCI CYCGRG 1 cut(s) 995
BslFI GGGAC 1 cut(s) 801
BslI CCNNNNNNNGG 6 cut(s) 55, 514, 652, 727, 765, 841
BsmAI GTCTC 2 cut(s) 992, 1036
BsmFI GGGAC 1 cut(s) 801
BsnI GGCC 3 cut(s) 421, 615, 833
Bso31I GGTCTC 1 cut(s) 992
BsoBI CYCGRG 1 cut(s) 995
Bsp1286I GDGCHC 4 cut(s) 85, 627, 758, 984
Bsp1407I TGTACA 1 cut(s) 25
Bsp143I GATC 2 cut(s) 331, 1090
BspANI GGCC 3 cut(s) 421, 615, 833
BspFNI CGCG 4 cut(s) 315, 621, 723, 842
BspLI GGNNCC 3 cut(s) 39, 580, 789
BspPI GGATC 2 cut(s) 326, 1085
BspQI GCTCTTC 1 cut(s) 989
BspT107I GGYRCC 1 cut(s) 37
BspTNI GGTCTC 1 cut(s) 992
BsrBI CCGCTC 1 cut(s) 837
BsrGI TGTACA 1 cut(s) 25
BsrI ACTGG 2 cut(s) 472, 497
BssECI CCNNGG 9 cut(s) 54, 68, 156, 513, 721, 840, 1002, 1101, 1102
BssMI GATC 2 cut(s) 331, 1090
BssT1I CCWWGG 4 cut(s) 68, 156, 513, 1002
Bst2UI CCWGG 2 cut(s) 799, 1103
Bst4CI ACNGT 4 cut(s) 115, 260, 439, 859
Bst6I CTCTTC 3 cut(s) 101, 989, 1014
BstAUI TGTACA 1 cut(s) 25
BstC8I GCNNGC 3 cut(s) 202, 623, 835
BstDEI CTNAG 2 cut(s) 127, 343
BstDSI CCRYGG 2 cut(s) 721, 840
BstENI CCTNNNNNAGG 1 cut(s) 53
BstF5I GGATG 3 cut(s) 182, 385, 782
BstFNI CGCG 4 cut(s) 315, 621, 723, 842
BstKTI GATC 2 cut(s) 334, 1093
BstMAI GTCTC 2 cut(s) 992, 1036
BstMBI GATC 2 cut(s) 331, 1090
BstMWI GCNNNNNNNGC 2 cut(s) 720, 839
BstNI CCWGG 2 cut(s) 799, 1103
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 2 cut(s) 797, 1101
BstSFI CTRYAG 1 cut(s) 234
BstUI CGCG 4 cut(s) 315, 621, 723, 842
BstV1I GCAGC 2 cut(s) 723, 962
BstV2I GAAGAC 1 cut(s) 952
BsuI GTATCC 1 cut(s) 241
BsuRI GGCC 3 cut(s) 421, 615, 833
BtgI CCRYGG 2 cut(s) 721, 840
BtsCI GGATG 3 cut(s) 182, 385, 782
BtsIMutI CAGTG 2 cut(s) 444, 465
Cac8I GCNNGC 3 cut(s) 202, 623, 835
Cfr13I GGNCC 2 cut(s) 788, 832
Cfr42I CCGCGG 2 cut(s) 724, 843
CseI GACGC 2 cut(s) 398, 539
Csp6I GTAC 2 cut(s) 26, 38
CspCI CAANNNNNGTGG 2 cut(s) 720, 755
CviAII CATG 3 cut(s) 367, 871, 967
CviQI GTAC 2 cut(s) 26, 38
DdeI CTNAG 2 cut(s) 127, 343
DpnI GATC 2 cut(s) 333, 1092
DpnII GATC 2 cut(s) 331, 1090
DraI TTTAAA 1 cut(s) 523
EaeI YGGCCR 1 cut(s) 613
Eam1104I CTCTTC 3 cut(s) 101, 989, 1014
EarI CTCTTC 3 cut(s) 101, 989, 1014
Eco130I CCWWGG 4 cut(s) 68, 156, 513, 1002
Eco24I GRGCYC 1 cut(s) 85
Eco31I GGTCTC 1 cut(s) 992
Eco47I GGWCC 1 cut(s) 788
Eco57I CTGAAG 2 cut(s) 376, 944
Eco88I CYCGRG 1 cut(s) 995
EcoNI CCTNNNNNAGG 1 cut(s) 53
EcoO109I RGGNCCY 1 cut(s) 788
EcoRI GAATTC 1 cut(s) 309
EcoRII CCWGG 2 cut(s) 797, 1101
EcoT14I CCWWGG 4 cut(s) 68, 156, 513, 1002
EcoT38I GRGCYC 1 cut(s) 85
ErhI CCWWGG 4 cut(s) 68, 156, 513, 1002
FaeI CATG 3 cut(s) 370, 874, 970
FalI AAGNNNNNCTT 4 cut(s) 374, 406, 517, 549
FaqI GGGAC 1 cut(s) 801
FatI CATG 3 cut(s) 366, 870, 966
FauI CCCGC 2 cut(s) 835, 842
FauNDI CATATG 1 cut(s) 12
Fnu4HI GCNGC 5 cut(s) 422, 616, 619, 712, 951
FokI GGATG 3 cut(s) 189, 372, 789
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 5 cut(s) 422, 616, 619, 712, 951
FspBI CTAG 4 cut(s) 353, 632, 810, 827
GluI GCNGC 5 cut(s) 422, 616, 619, 712, 951
GsuI CTGGAG 2 cut(s) 480, 1060
HaeIII GGCC 3 cut(s) 421, 615, 833
HgaI GACGC 2 cut(s) 398, 539
Hin1II CATG 3 cut(s) 370, 874, 970
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HinfI GANTC 1 cut(s) 73
HphI GGTGA 2 cut(s) 103, 172
Hpy166II GTNNAC 2 cut(s) 26, 868
Hpy188I TCNGA 4 cut(s) 55, 395, 414, 776
Hpy188III TCNNGA 5 cut(s) 335, 353, 508, 995, 1039
Hpy8I GTNNAC 2 cut(s) 26, 868
Hpy99I CGWCG 2 cut(s) 414, 863
HpyAV CCTTC 3 cut(s) 400, 629, 910
HpyCH4III ACNGT 4 cut(s) 115, 260, 439, 859
HpyCH4IV ACGT 4 cut(s) 135, 327, 881, 1032
HpyCH4V TGCA 3 cut(s) 10, 62, 448
HpyF10VI GCNNNNNNNGC 2 cut(s) 720, 839
HpyF3I CTNAG 2 cut(s) 127, 343
HpySE526I ACGT 4 cut(s) 135, 327, 881, 1032
Hsp92II CATG 3 cut(s) 370, 874, 970
KpnI GGTACC 1 cut(s) 41
KspI CCGCGG 2 cut(s) 724, 843
Kzo9I GATC 2 cut(s) 331, 1090
LguI GCTCTTC 1 cut(s) 989
LmnI GCTCC 5 cut(s) 283, 499, 578, 761, 842
Lsp1109I GCAGC 2 cut(s) 723, 962
LweI GCATC 1 cut(s) 394
MaeI CTAG 4 cut(s) 353, 632, 810, 827
MaeII ACGT 4 cut(s) 135, 327, 881, 1032
MaeIII GTNAC 5 cut(s) 109, 160, 527, 670, 853
MalI GATC 2 cut(s) 333, 1092
MbiI CCGCTC 1 cut(s) 837
MboI GATC 2 cut(s) 331, 1090
MboII GAAGA 6 cut(s) 88, 445, 952, 976, 1031, 1097
MhlI GDGCHC 4 cut(s) 85, 627, 758, 984
MluCI AATT 6 cut(s) 142, 309, 429, 461, 484, 732
MmeI TCCRAC 4 cut(s) 97, 261, 392, 556
MseI TTAA 4 cut(s) 87, 474, 522, 690
MslI CAYNNNNRTG 1 cut(s) 666
MspA1I CMGCKG 2 cut(s) 723, 842
MspR9I CCNGG 2 cut(s) 799, 1103
MvaI CCWGG 2 cut(s) 799, 1103
MvnI CGCG 4 cut(s) 315, 621, 723, 842
MwoI GCNNNNNNNGC 2 cut(s) 720, 839
NdeI CATATG 1 cut(s) 12
NdeII GATC 2 cut(s) 331, 1090
NlaIII CATG 3 cut(s) 370, 874, 970
NlaIV GGNNCC 3 cut(s) 39, 580, 789
NmeAIII GCCGAG 1 cut(s) 524
NmuCI GTSAC 4 cut(s) 109, 160, 527, 853
NspI RCATGY 1 cut(s) 874
PasI CCCWGGG 1 cut(s) 1102
PciI ACATGT 1 cut(s) 870
PciSI GCTCTTC 1 cut(s) 989
PfeI GAWTC 1 cut(s) 73
PflFI GACNNNGTC 1 cut(s) 1034
PflMI CCANNNNNTGG 2 cut(s) 514, 652
PkrI GCNGC 5 cut(s) 423, 617, 620, 713, 952
PpuMI RGGWCCY 1 cut(s) 788
PscI ACATGT 1 cut(s) 870
PsiI TTATAA 1 cut(s) 554
Psp1406I AACGTT 1 cut(s) 327
Psp5II RGGWCCY 1 cut(s) 788
Psp6I CCWGG 2 cut(s) 797, 1101
PspGI CCWGG 2 cut(s) 797, 1101
PspN4I GGNNCC 3 cut(s) 39, 580, 789
PspPI GGNCC 2 cut(s) 788, 832
PspPPI RGGWCCY 1 cut(s) 788
PsyI GACNNNGTC 1 cut(s) 1034
RsaI GTAC 2 cut(s) 27, 39
RsaNI GTAC 2 cut(s) 26, 38
RseI CAYNNNNRTG 1 cut(s) 666
SacII CCGCGG 2 cut(s) 724, 843
SapI GCTCTTC 1 cut(s) 989
SaqAI TTAA 4 cut(s) 87, 474, 522, 690
SatI GCNGC 5 cut(s) 422, 616, 619, 712, 951
Sau3AI GATC 2 cut(s) 331, 1090
Sau96I GGNCC 2 cut(s) 788, 832
ScrFI CCNGG 2 cut(s) 799, 1103
SduI GDGCHC 4 cut(s) 85, 627, 758, 984
SfaNI GCATC 1 cut(s) 394
SfcI CTRYAG 1 cut(s) 234
Sfr303I CCGCGG 2 cut(s) 724, 843
SgrBI CCGCGG 2 cut(s) 724, 843
SinI GGWCC 1 cut(s) 788
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 6 cut(s) 142, 309, 429, 461, 484, 732
SspMI CTAG 4 cut(s) 353, 632, 810, 827
StyD4I CCNGG 2 cut(s) 797, 1101
StyI CCWWGG 4 cut(s) 68, 156, 513, 1002
TaaI ACNGT 4 cut(s) 115, 260, 439, 859
TaiI ACGT 4 cut(s) 138, 330, 884, 1035
TasI AATT 6 cut(s) 142, 309, 429, 461, 484, 732
TatI WGTACW 1 cut(s) 25
TauI GCSGC 3 cut(s) 424, 618, 621
TfiI GAWTC 1 cut(s) 73
Tru1I TTAA 4 cut(s) 87, 474, 522, 690
Tru9I TTAA 4 cut(s) 87, 474, 522, 690
TscAI CASTG 2 cut(s) 444, 472
TseFI GTSAC 4 cut(s) 109, 160, 527, 853
TseI GCWGC 2 cut(s) 711, 950
Tsp45I GTSAC 4 cut(s) 109, 160, 527, 853
TspDTI ATGAA 1 cut(s) 952
TspGWI ACGGA 2 cut(s) 198, 1043
TspRI CASTG 2 cut(s) 444, 472
Tth111I GACNNNGTC 1 cut(s) 1034
Van91I CCANNNNNTGG 2 cut(s) 514, 652
VpaK11BI GGWCC 1 cut(s) 788
XagI CCTNNNNNAGG 1 cut(s) 53
XapI RAATTY 1 cut(s) 309
XbaI TCTAGA 1 cut(s) 352
XceI RCATGY 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 2 cut(s) 464, 926
XspI CTAG 4 cut(s) 353, 632, 810, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.