MD16G1190100.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
16559255 .. 16562019
2765 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1190100.v1.1.491

Sequence Viewer

Length: 1008 bp
ATGGTCACCATTGGCATTCTTGTAGCACAACTTATCAATTATGGAACTGCGAAGATTAAAGGGGGATATGGATGGAGGATATCACTCGGTTTGGCTGGCATTCCATCACTCTTGCTAACACTGGGGGCTGTCATTGTAACAGACACTCCAAACAGTTTGATCCAACGAGGTAAGTTGGAGCAAGGAAAAAAAGTTCTAAAGAGGATCCGGGGTATTGAGAATGTCGATCCGGAATTCCTTGAGATTCTCGAGGCAAGTCGCGCTGCTAAAGAAGTGAAGCATCCCTTCAGAAATCTCCTTAAGCGTAAAAACAGACCTCAACTGATCATTACAATTTTCTTGCAGTTCTTCCAGCAATTCACAGGCATTAACTCAATCAATTTTTACGCTCCAGTTTTGTTCCAGACCTTGGGATTTAAGAATGATGCTTCCCTTTACTCATCAGTTATAACAGGCGTAATCATGGTCCTCGGAGCCATTATTTCAATTTACTTTGTCGACAAAGCTGGTCGCCGCGTGCTCTTGATTGAAGGTGGCATCCAAATGTTCCTCTCTCATGTGGTCGTTGCAATCATACTTGGGATGAAACTTAAGGATCAATCCAACGACCTCGACCACGGGTTGGGAATTCTTGTGGTTATTGTAGTCTGTTCTTTTGTGGGTTCCTTTGGATGGTCTTGGGGGCCTCTTTGTTGGTTGGTTGCCAGTGAGATATTCCCTCTAGAGGCTCGCTCCGCCGGGCAGAGTGTGACTGTGTCTGTAAACATGTTGTTCACATTTGTTATAGCACAGGCCTTCCTCTCAATGCTTTGTCACATGAAGTTTGCTATTTTCTTATTCTTCGCAGCGTGGGTCTTCCTCATGACAGTCTTCGTCTTCTTTTTACTTCCGGAGACTAAAGGTGTCCCTATCGAAGAAATGGTAGACGTAGTGTGGAGGGAGCATTGGTATTGGAAGAGATATATGGATGACTGCGAAGATGATCCTAAGGAGAAGGGACATGCTTGA

Protein Analysis

336

Amino Acids

37.6

Weight (kDa)

8.95

Isoelectric Point (pI)

30.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 1 - 307 1.4e-83 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 449
AccB7I CCANNNNNTGG 2 cut(s) 409, 622
AccI GTMKAC 2 cut(s) 498, 924
AccII CGCG 2 cut(s) 261, 516
AccIII TCCGGA 2 cut(s) 229, 889
AciI CCGC 2 cut(s) 514, 735
AclWI GGATC 6 cut(s) 154, 199, 212, 221, 603, 977
AcsI RAATTY 2 cut(s) 233, 627
AcuI CTGAAG 1 cut(s) 271
AfiI CCNNNNNNNGG 4 cut(s) 409, 622, 672, 724
AflII CTTAAG 2 cut(s) 299, 590
AflIII ACRYGT 1 cut(s) 765
AgsI TTSAA 2 cut(s) 486, 530
AloI GAACNNNNNNTCC 2 cut(s) 177, 209
AluBI AGCT 1 cut(s) 506
AluI AGCT 1 cut(s) 506
Alw21I GWGCWC 1 cut(s) 522
Alw26I GTCTC 1 cut(s) 887
AlwI GGATC 6 cut(s) 154, 199, 212, 221, 603, 977
Ama87I CYCGRG 1 cut(s) 248
Aor13HI TCCGGA 2 cut(s) 229, 889
AoxI GGCC 2 cut(s) 683, 792
ApeKI GCWGC 2 cut(s) 263, 845
ApoI RAATTY 2 cut(s) 233, 627
AspLEI GCGC 1 cut(s) 263
AspS9I GGNCC 2 cut(s) 466, 683
AsuC2I CCSGG 2 cut(s) 209, 739
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 1 cut(s) 466
AxyI CCTNAGG 1 cut(s) 987
BamHI GGATCC 1 cut(s) 204
BbsI GAAGAC 3 cut(s) 847, 862, 868
Bbv12I GWGCWC 1 cut(s) 522
BbvI GCAGC 2 cut(s) 250, 857
BccI CCATC 3 cut(s) 66, 112, 666
BclI TGATCA 1 cut(s) 324
BcnI CCSGG 2 cut(s) 209, 739
BcoDI GTCTC 1 cut(s) 887
BfaI CTAG 1 cut(s) 722
BfrI CTTAAG 2 cut(s) 299, 590
BisI GCNGC 3 cut(s) 264, 514, 846
BlsI GCNGC 3 cut(s) 265, 515, 847
Bme1390I CCNGG 2 cut(s) 209, 739
Bme18I GGWCC 1 cut(s) 466
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 2 cut(s) 466, 683
BmiI GGNNCC 4 cut(s) 206, 475, 664, 684
BmrFI CCNGG 2 cut(s) 209, 739
BmrI ACTGGG 1 cut(s) 131
BmsI GCATC 3 cut(s) 289, 415, 546
BmuI ACTGGG 1 cut(s) 131
BpiI GAAGAC 3 cut(s) 847, 862, 868
BplI GAGNNNNNCTC 2 cut(s) 716, 748
BpmI CTGGAG 1 cut(s) 375
BpuEI CTTGAG 1 cut(s) 260
BpuMI CCSGG 2 cut(s) 209, 739
BsaJI CCNNGG 4 cut(s) 208, 408, 469, 616
BsaWI WCCGGW 2 cut(s) 229, 889
BsaXI ACNNNNNCTCC 4 cut(s) 130, 160, 932, 962
Bsc4I CCNNNNNNNGG 4 cut(s) 409, 622, 672, 724
Bse1I ACTGG 3 cut(s) 126, 392, 705
Bse21I CCTNAGG 1 cut(s) 987
BseAI TCCGGA 2 cut(s) 229, 889
BseDI CCNNGG 4 cut(s) 208, 408, 469, 616
BseGI GGATG 6 cut(s) 77, 280, 537, 588, 677, 973
BseLI CCNNNNNNNGG 4 cut(s) 409, 622, 672, 724
BseNI ACTGG 3 cut(s) 126, 392, 705
BseXI GCAGC 2 cut(s) 250, 857
Bsh1236I CGCG 2 cut(s) 261, 516
BshFI GGCC 2 cut(s) 685, 794
BsiHKAI GWGCWC 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 4 cut(s) 208, 230, 738, 890
BslFI GGGAC 1 cut(s) 890
BslI CCNNNNNNNGG 4 cut(s) 409, 622, 672, 724
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 1 cut(s) 890
BsmI GAATGC 2 cut(s) 15, 99
BsnI GGCC 2 cut(s) 685, 794
BsoBI CYCGRG 1 cut(s) 248
Bsp1286I GDGCHC 1 cut(s) 522
Bsp13I TCCGGA 2 cut(s) 229, 889
Bsp143I GATC 6 cut(s) 159, 204, 226, 324, 595, 982
BspACI CCGC 2 cut(s) 514, 735
BspANI GGCC 2 cut(s) 685, 794
BspEI TCCGGA 2 cut(s) 229, 889
BspFNI CGCG 2 cut(s) 261, 516
BspHI TCATGA 1 cut(s) 861
BspLI GGNNCC 4 cut(s) 206, 475, 664, 684
BspPI GGATC 6 cut(s) 154, 199, 212, 221, 603, 977
BspTI CTTAAG 2 cut(s) 299, 590
BsrI ACTGG 3 cut(s) 126, 392, 705
BssECI CCNNGG 4 cut(s) 208, 408, 469, 616
BssMI GATC 6 cut(s) 159, 204, 226, 324, 595, 982
BssT1I CCWWGG 1 cut(s) 408
Bst4CI ACNGT 3 cut(s) 155, 754, 868
Bst6I CTCTTC 1 cut(s) 950
BstAFI CTTAAG 2 cut(s) 299, 590
BstC8I GCNNGC 3 cut(s) 97, 518, 730
BstDEI CTNAG 1 cut(s) 987
BstDSI CCRYGG 1 cut(s) 616
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 6 cut(s) 77, 280, 537, 588, 677, 973
BstFNI CGCG 2 cut(s) 261, 516
BstHHI GCGC 1 cut(s) 263
BstKTI GATC 6 cut(s) 162, 207, 229, 327, 598, 985
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 6 cut(s) 159, 204, 226, 324, 595, 982
BstMWI GCNNNNNNNGC 2 cut(s) 260, 734
BstNSI RCATGY 2 cut(s) 769, 1004
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 2 cut(s) 207, 737
BstUI CGCG 2 cut(s) 261, 516
BstV1I GCAGC 2 cut(s) 250, 857
BstV2I GAAGAC 3 cut(s) 847, 862, 868
BstX2I RGATCY 1 cut(s) 204
BstYI RGATCY 1 cut(s) 204
Bsu36I CCTNAGG 1 cut(s) 987
BsuRI GGCC 2 cut(s) 685, 794
BtgI CCRYGG 1 cut(s) 616
BtsCI GGATG 6 cut(s) 77, 280, 537, 588, 677, 973
BtsIMutI CAGTG 2 cut(s) 119, 712
Cac8I GCNNGC 3 cut(s) 97, 518, 730
CciI TCATGA 1 cut(s) 861
CfoI GCGC 1 cut(s) 263
Cfr13I GGNCC 2 cut(s) 466, 683
CviAII CATG 6 cut(s) 463, 557, 766, 817, 862, 1001
CviJI RGCY 7 cut(s) 95, 128, 476, 506, 685, 728, 794
CviKI_1 RGCY 7 cut(s) 95, 128, 476, 506, 685, 728, 794
DdeI CTNAG 1 cut(s) 987
DpnI GATC 6 cut(s) 161, 206, 228, 326, 597, 984
DpnII GATC 6 cut(s) 159, 204, 226, 324, 595, 982
Eam1104I CTCTTC 1 cut(s) 950
EarI CTCTTC 1 cut(s) 950
EciI GGCGGA 1 cut(s) 724
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 794
Eco32I GATATC 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 466
Eco57I CTGAAG 1 cut(s) 271
Eco81I CCTNAGG 1 cut(s) 987
Eco88I CYCGRG 1 cut(s) 248
Eco91I GGTNACC 1 cut(s) 4
EcoO109I RGGNCCY 1 cut(s) 683
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 2 cut(s) 233, 627
EcoRV GATATC 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 408
ErhI CCWWGG 1 cut(s) 408
FaeI CATG 6 cut(s) 466, 560, 769, 820, 865, 1004
FalI AAGNNNNNCTT 2 cut(s) 269, 301
FaqI GGGAC 1 cut(s) 890
FatI CATG 6 cut(s) 462, 556, 765, 816, 861, 1000
FbaI TGATCA 1 cut(s) 324
FblI GTMKAC 2 cut(s) 498, 924
Fnu4HI GCNGC 3 cut(s) 264, 514, 846
FokI GGATG 6 cut(s) 84, 267, 524, 595, 684, 980
Fsp4HI GCNGC 3 cut(s) 264, 514, 846
FspBI CTAG 1 cut(s) 722
GlaI GCGC 1 cut(s) 262
GluI GCNGC 3 cut(s) 264, 514, 846
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 2 cut(s) 685, 794
HapII CCGG 4 cut(s) 208, 230, 738, 890
HhaI GCGC 1 cut(s) 263
Hin1II CATG 6 cut(s) 466, 560, 769, 820, 865, 1004
Hin6I GCGC 1 cut(s) 261
HinP1I GCGC 1 cut(s) 261
HincII GTYRAC 1 cut(s) 499
HindII GTYRAC 1 cut(s) 499
HinfI GANTC 1 cut(s) 244
HpaII CCGG 4 cut(s) 208, 230, 738, 890
Hpy166II GTNNAC 4 cut(s) 499, 763, 774, 925
Hpy188I TCNGA 2 cut(s) 290, 473
Hpy188III TCNNGA 7 cut(s) 230, 248, 403, 523, 722, 862, 890
Hpy8I GTNNAC 4 cut(s) 499, 763, 774, 925
HpyAV CCTTC 4 cut(s) 295, 524, 805, 988
HpyCH4III ACNGT 3 cut(s) 155, 754, 868
HpyCH4IV ACGT 1 cut(s) 927
HpyCH4V TGCA 2 cut(s) 343, 569
HpyF10VI GCNNNNNNNGC 2 cut(s) 260, 734
HpyF3I CTNAG 1 cut(s) 987
HpySE526I ACGT 1 cut(s) 927
Hsp92II CATG 6 cut(s) 466, 560, 769, 820, 865, 1004
HspAI GCGC 1 cut(s) 261
Kpn2I TCCGGA 2 cut(s) 229, 889
Ksp22I TGATCA 1 cut(s) 324
Kzo9I GATC 6 cut(s) 159, 204, 226, 324, 595, 982
LmnI GCTCC 5 cut(s) 178, 394, 473, 737, 940
Lsp1109I GCAGC 2 cut(s) 250, 857
LweI GCATC 3 cut(s) 289, 415, 546
MaeI CTAG 1 cut(s) 722
MaeII ACGT 1 cut(s) 927
MaeIII GTNAC 4 cut(s) 4, 136, 748, 812
MalI GATC 6 cut(s) 161, 206, 228, 326, 597, 984
MboI GATC 6 cut(s) 159, 204, 226, 324, 595, 982
MboII GAAGA 9 cut(s) 64, 340, 832, 847, 862, 868, 926, 967, 989
MflI RGATCY 1 cut(s) 204
MhlI GDGCHC 1 cut(s) 522
MluCI AATT 7 cut(s) 37, 233, 333, 356, 379, 486, 627
MmeI TCCRAC 3 cut(s) 156, 187, 627
MroI TCCGGA 2 cut(s) 229, 889
MseI TTAA 5 cut(s) 57, 300, 369, 417, 591
MslI CAYNNNNRTG 1 cut(s) 542
MspCI CTTAAG 2 cut(s) 299, 590
MspI CCGG 4 cut(s) 208, 230, 738, 890
MspR9I CCNGG 2 cut(s) 209, 739
Mva1269I GAATGC 2 cut(s) 15, 99
MvnI CGCG 2 cut(s) 261, 516
MwoI GCNNNNNNNGC 2 cut(s) 260, 734
NciI CCSGG 2 cut(s) 209, 739
NdeII GATC 6 cut(s) 159, 204, 226, 324, 595, 982
NlaIII CATG 6 cut(s) 466, 560, 769, 820, 865, 1004
NlaIV GGNNCC 4 cut(s) 206, 475, 664, 684
NmuCI GTSAC 3 cut(s) 4, 748, 812
NspI RCATGY 2 cut(s) 769, 1004
PaeR7I CTCGAG 1 cut(s) 248
PagI TCATGA 1 cut(s) 861
PceI AGGCCT 1 cut(s) 794
PciI ACATGT 1 cut(s) 765
PctI GAATGC 2 cut(s) 15, 99
PfeI GAWTC 1 cut(s) 244
PflFI GACNNNGTC 1 cut(s) 754
PflMI CCANNNNNTGG 2 cut(s) 409, 622
PkrI GCNGC 3 cut(s) 265, 515, 847
PscI ACATGT 1 cut(s) 765
PsiI TTATAA 1 cut(s) 449
PspEI GGTNACC 1 cut(s) 4
PspN4I GGNNCC 4 cut(s) 206, 475, 664, 684
PspPI GGNCC 2 cut(s) 466, 683
PsuI RGATCY 1 cut(s) 204
PsyI GACNNNGTC 1 cut(s) 754
RseI CAYNNNNRTG 1 cut(s) 542
SalI GTCGAC 1 cut(s) 497
SaqAI TTAA 5 cut(s) 57, 300, 369, 417, 591
SatI GCNGC 3 cut(s) 264, 514, 846
Sau3AI GATC 6 cut(s) 159, 204, 226, 324, 595, 982
Sau96I GGNCC 2 cut(s) 466, 683
ScrFI CCNGG 2 cut(s) 209, 739
SduI GDGCHC 1 cut(s) 522
SetI ASST 8 cut(s) 172, 319, 410, 508, 535, 612, 904, 930
SfaNI GCATC 3 cut(s) 289, 415, 546
Sfr274I CTCGAG 1 cut(s) 248
SinI GGWCC 1 cut(s) 466
SlaI CTCGAG 1 cut(s) 248
SmiMI CAYNNNNRTG 1 cut(s) 542
SmlI CTYRAG 4 cut(s) 239, 248, 299, 590
SmoI CTYRAG 4 cut(s) 239, 248, 299, 590
Sse9I AATT 7 cut(s) 37, 233, 333, 356, 379, 486, 627
SseBI AGGCCT 1 cut(s) 794
SsiI CCGC 2 cut(s) 514, 735
SspMI CTAG 1 cut(s) 722
StuI AGGCCT 1 cut(s) 794
StyD4I CCNGG 2 cut(s) 207, 737
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 3 cut(s) 155, 754, 868
TaiI ACGT 1 cut(s) 930
TaqI TCGA 5 cut(s) 225, 249, 498, 612, 912
TasI AATT 7 cut(s) 37, 233, 333, 356, 379, 486, 627
TauI GCSGC 1 cut(s) 516
TfiI GAWTC 1 cut(s) 244
Tru1I TTAA 5 cut(s) 57, 300, 369, 417, 591
Tru9I TTAA 5 cut(s) 57, 300, 369, 417, 591
TscAI CASTG 2 cut(s) 126, 712
TseFI GTSAC 3 cut(s) 4, 748, 812
TseI GCWGC 2 cut(s) 263, 845
Tsp45I GTSAC 3 cut(s) 4, 748, 812
TspDTI ATGAA 2 cut(s) 599, 833
TspRI CASTG 2 cut(s) 126, 712
Tth111I GACNNNGTC 1 cut(s) 754
Van91I CCANNNNNTGG 2 cut(s) 409, 622
Vha464I CTTAAG 2 cut(s) 299, 590
VpaK11BI GGWCC 1 cut(s) 466
XapI RAATTY 2 cut(s) 233, 627
XbaI TCTAGA 1 cut(s) 721
XceI RCATGY 2 cut(s) 769, 1004
XhoI CTCGAG 1 cut(s) 248
XmiI GTMKAC 2 cut(s) 498, 924
XspI CTAG 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.