Rmu_ssc0000377.1_g000043
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000377.1
OG0000367
Physical Location & Seq
Forward (+)
164474 .. 171784
7311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000377.1_g000043.1.cds

Sequence Viewer

Length: 1590 bp
atggccggaggtttctcgaccggcacagccggcagtgaattcgaggcgaagatcacccctatcgtcatcctctcatgcataatggcggccaccggaggcctcatgttcggctacgacgtcggcgtttcaggtggagttacatcgatggatcctttcttggagaagttcttcccagttgtttataggaaaaaaaaggacccaaacattgatagcaattactgcaaatatgataaccaaggcctgcagttgttcacatcttcactctacctggctggtttaaccgcgacgttcgccgcttcctacaccaccagaaactttgggaggagaccctctatgctcattgccgggggtttcttcatagttggaacaattcttaatgctgcagctcaagatcttgccatgctcatcattgggaggatctcacttggttgtggagttggttttgccaatcaggctgtacctctgttcctttcggagattgcacctacaagaatacgtggggggctaaacatactcttccagctcaatgtcaccattggcattctgtttgcaaacctcgttaactatagcaccaatgaaatctcaggaggatggggatggaggctatcattgggtttggctggtattcccgccggtctccttaccttgggggccctctttgtggcggaaacacctaacagtcttgtagagcgtggtcgcttagaagaaggaaaagctatacttagaaggattcggggcattgagaacgttgaacctgagttcttggaacttgttgaggctagtcgcgtggctaaagaagtgaagcatcctttcagaaatctcctaaagcgtaggaatcgcccccagctagtcattgcagtagcattgcagatctttcaacaatttactggaatcaatgccattatgttttacgcgccagtgttgtttgacacagtgggatttggcagcgacgctgctctatactcagctgttataacaggagctgtcaatgttctctccactgttgtatccatctactcagttgacaaagtgggtcgtcgcatgctcttactcgaagctggggttcaaatgttcctgtctcaagtggttatagctataatactgggaatcaaggtcaaggatcacaatgatgaccttcagaaaggctttgcaatcttggtggtggttatgatctgcaccttcgtatctgcctttgcctggtcttggggacctctaggttggctgataccaagtgagacattcccactggagaccagatcagctgggcaaagtgtgaccgtctgcaccaacttgctcttcacttttgcgatagcacaggccttcctctctatgctttgccacttcaagtggggcatcttccttttcttcgcgagctgggtcctggtcatgtcggccttcgtgctattcctggtcccggagacaaagaacatcccgattgaagaaatgacagagagggtctggaggcagcattggttgtggaagaagtacattgatgctgactaccacactgaaggagccaacattaatggtactgacgccgcaaagaaaaatggacattctaatggatttgatcccgtcactcagttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

529

Amino Acids

57.87

Weight (kDa)

8.62

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AatII GACGTC 1 cut(s) 120
AccII CGCG 4 cut(s) 284, 786, 914, 1370
AciI CCGC 6 cut(s) 86, 282, 294, 630, 665, 1539
AclI AACGTT 1 cut(s) 747
AclWI GGATC 5 cut(s) 143, 156, 425, 1128, 1565
AcoI YGGCCR 2 cut(s) 3, 87
AcsI RAATTY 1 cut(s) 38
AcuI CTGAAG 2 cut(s) 1121, 1530
AcyI GRCGYC 2 cut(s) 117, 1536
AfaI GTAC 3 cut(s) 459, 1487, 1531
AfiI CCNNNNNNNGG 5 cut(s) 646, 661, 1197, 1203, 1414
AgsI TTSAA 5 cut(s) 752, 878, 1067, 1345, 1439
AjnI CCWGG 4 cut(s) 267, 1196, 1380, 1407
AjuI GAANNNNNNNTTGG 2 cut(s) 1280, 1312
Alw26I GTCTC 6 cut(s) 319, 641, 1083, 1229, 1244, 1412
AlwI GGATC 5 cut(s) 143, 156, 425, 1128, 1565
AlwNI CAGNNNCTG 1 cut(s) 983
AoxI GGCC 7 cut(s) 3, 87, 97, 238, 651, 1317, 1392
ApaI GGGCCC 1 cut(s) 655
ApeKI GCWGC 5 cut(s) 380, 383, 945, 953, 1465
ApoI RAATTY 1 cut(s) 38
AseI ATTAAT 1 cut(s) 1524
Asp700I GAANNNNTTC 1 cut(s) 167
AspLEI GCGC 1 cut(s) 916
AspS9I GGNCC 6 cut(s) 196, 651, 652, 1208, 1378, 1411
AsuC2I CCSGG 2 cut(s) 346, 1415
AsuHPI GGTGA 2 cut(s) 46, 523
AvaII GGWCC 4 cut(s) 196, 1208, 1378, 1411
BaeGI GKGCMC 1 cut(s) 655
BaeI ACNNNNGTAYC 4 cut(s) 990, 1023, 1167, 1200
BamHI GGATCC 1 cut(s) 148
BanII GRGCYC 1 cut(s) 655
BbvI GCAGC 5 cut(s) 367, 395, 940, 957, 1477
BccI CCATC 4 cut(s) 139, 585, 591, 1019
BcgI CGANNNNNNTGC 2 cut(s) 22, 56
BciT130I CCWGG 4 cut(s) 269, 1198, 1382, 1409
BciVI GTATCC 1 cut(s) 1018
BcnI CCSGG 2 cut(s) 346, 1415
BcoDI GTCTC 6 cut(s) 319, 641, 1083, 1229, 1244, 1412
BfaI CTAG 3 cut(s) 780, 848, 1214
BfmI CTRYAG 3 cut(s) 242, 381, 565
BfuI GTATCC 1 cut(s) 1018
BglI GCCNNNNNGGC 1 cut(s) 452
BglII AGATCT 2 cut(s) 391, 870
BisI GCNGC 8 cut(s) 87, 294, 381, 384, 946, 954, 1466, 1539
BlsI GCNGC 8 cut(s) 88, 295, 382, 385, 947, 955, 1467, 1540
Bme1390I CCNGG 6 cut(s) 269, 346, 1198, 1382, 1409, 1415
Bme18I GGWCC 4 cut(s) 196, 1208, 1378, 1411
BmgT120I GGNCC 6 cut(s) 196, 651, 652, 1208, 1378, 1411
BmiI GGNNCC 8 cut(s) 150, 198, 652, 653, 1209, 1379, 1413, 1516
BmrFI CCNGG 6 cut(s) 269, 346, 1198, 1382, 1409, 1415
BmrI ACTGGG 2 cut(s) 167, 1112
BmsI GCATC 3 cut(s) 814, 1362, 1483
BmuI ACTGGG 2 cut(s) 167, 1112
BpmI CTGGAG 2 cut(s) 1268, 1480
BpuEI CTTGAG 2 cut(s) 372, 1065
BpuMI CCSGG 2 cut(s) 346, 1415
Bsa29I ATCGAT 1 cut(s) 143
BsaAI YACGTR 1 cut(s) 497
BsaHI GRCGYC 2 cut(s) 117, 1536
BsaI GGTCTC 3 cut(s) 319, 641, 1244
BsaJI CCNNGG 3 cut(s) 235, 345, 645
BsaWI WCCGGW 1 cut(s) 92
Bsc4I CCNNNNNNNGG 5 cut(s) 646, 661, 1197, 1203, 1414
Bse118I RCCGGY 3 cut(s) 20, 29, 632
Bse1I ACTGG 5 cut(s) 173, 892, 917, 1107, 1251
Bse3DI GCAATG 3 cut(s) 339, 852, 863
BseBI CCWGG 4 cut(s) 269, 1198, 1382, 1409
BseCI ATCGAT 1 cut(s) 143
BseDI CCNNGG 3 cut(s) 235, 345, 645
BseGI GGATG 5 cut(s) 66, 596, 602, 805, 1428
BseLI CCNNNNNNNGG 5 cut(s) 646, 661, 1197, 1203, 1414
BseMI GCAATG 3 cut(s) 339, 852, 863
BseMII CTCAG 4 cut(s) 597, 747, 978, 1032
BseNI ACTGG 5 cut(s) 173, 892, 917, 1107, 1251
BseRI GAGGAG 1 cut(s) 337
BseSI GKGCMC 1 cut(s) 655
BseXI GCAGC 5 cut(s) 367, 395, 940, 957, 1477
BseYI CCCAGC 4 cut(s) 843, 1058, 1262, 1374
BsgI GTGCAG 2 cut(s) 1159, 1267
Bsh1236I CGCG 4 cut(s) 284, 786, 914, 1370
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 7 cut(s) 5, 89, 99, 240, 653, 1319, 1394
BshVI ATCGAT 1 cut(s) 143
BsiEI CGRYCG 1 cut(s) 21
BsiSI CCGG 7 cut(s) 6, 21, 30, 93, 345, 633, 1415
BslFI GGGAC 2 cut(s) 1221, 1397
BslI CCNNNNNNNGG 5 cut(s) 646, 661, 1197, 1203, 1414
BsmAI GTCTC 6 cut(s) 319, 641, 1083, 1229, 1244, 1412
BsmFI GGGAC 2 cut(s) 1221, 1397
BsmI GAATGC 1 cut(s) 540
BsnI GGCC 7 cut(s) 5, 89, 99, 240, 653, 1319, 1394
Bso31I GGTCTC 3 cut(s) 319, 641, 1244
Bsp120I GGGCCC 1 cut(s) 651
Bsp1286I GDGCHC 1 cut(s) 655
Bsp143I GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
Bsp68I TCGCGA 1 cut(s) 1370
BspACI CCGC 6 cut(s) 86, 282, 294, 630, 665, 1539
BspANI GGCC 7 cut(s) 5, 89, 99, 240, 653, 1319, 1394
BspCNI CTCAG 4 cut(s) 596, 748, 977, 1031
BspDI ATCGAT 1 cut(s) 143
BspFNI CGCG 4 cut(s) 284, 786, 914, 1370
BspLI GGNNCC 8 cut(s) 150, 198, 652, 653, 1209, 1379, 1413, 1516
BspMAI CTGCAG 2 cut(s) 246, 385
BspPI GGATC 5 cut(s) 143, 156, 425, 1128, 1565
BspQI GCTCTTC 1 cut(s) 1301
BspTNI GGTCTC 3 cut(s) 319, 641, 1244
BsrDI GCAATG 3 cut(s) 339, 852, 863
BsrFI RCCGGY 3 cut(s) 20, 29, 632
BsrI ACTGG 5 cut(s) 173, 892, 917, 1107, 1251
BssAI RCCGGY 3 cut(s) 20, 29, 632
BssECI CCNNGG 3 cut(s) 235, 345, 645
BssMI GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
BssNI GRCGYC 2 cut(s) 117, 1536
BssT1I CCWWGG 2 cut(s) 235, 645
Bst2UI CCWGG 4 cut(s) 269, 1198, 1382, 1409
Bst4CI ACNGT 4 cut(s) 680, 934, 1003, 1279
Bst6I CTCTTC 2 cut(s) 521, 1301
BstACI GRCGYC 2 cut(s) 117, 1536
BstAPI GCANNNNNTGC 1 cut(s) 219
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 4 cut(s) 31, 242, 1043, 1372
BstDEI CTNAG 7 cut(s) 583, 700, 722, 756, 964, 1018, 1581
BstF5I GGATG 5 cut(s) 66, 596, 602, 805, 1428
BstFNI CGCG 4 cut(s) 284, 786, 914, 1370
BstHHI GCGC 1 cut(s) 916
BstKTI GATC 9 cut(s) 54, 151, 394, 420, 873, 1123, 1173, 1259, 1573
BstMAI GTCTC 6 cut(s) 319, 641, 1083, 1229, 1244, 1412
BstMBI GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 4 cut(s) 30, 219, 290, 452
BstNI CCWGG 4 cut(s) 269, 1198, 1382, 1409
BstNSI RCATGY 1 cut(s) 1045
BstSCI CCNGG 6 cut(s) 267, 344, 1196, 1380, 1407, 1413
BstSFI CTRYAG 3 cut(s) 242, 381, 565
BstSLI GKGCMC 1 cut(s) 655
BstUI CGCG 4 cut(s) 284, 786, 914, 1370
BstV1I GCAGC 5 cut(s) 367, 395, 940, 957, 1477
BstX2I RGATCY 4 cut(s) 148, 391, 417, 870
BstYI RGATCY 4 cut(s) 148, 391, 417, 870
Bsu15I ATCGAT 1 cut(s) 143
BsuI GTATCC 1 cut(s) 1018
BsuRI GGCC 7 cut(s) 5, 89, 99, 240, 653, 1319, 1394
BsuTUI ATCGAT 1 cut(s) 143
BtsCI GGATG 5 cut(s) 66, 596, 602, 805, 1428
BtsI GCAGTG 1 cut(s) 40
BtsIMutI CAGTG 6 cut(s) 40, 924, 939, 999, 1244, 1506
BtuMI TCGCGA 1 cut(s) 1370
Cac8I GCNNGC 4 cut(s) 31, 242, 1043, 1372
CaiI CAGNNNCTG 1 cut(s) 983
CfoI GCGC 1 cut(s) 916
Cfr10I RCCGGY 3 cut(s) 20, 29, 632
Cfr13I GGNCC 6 cut(s) 196, 651, 652, 1208, 1378, 1411
ClaI ATCGAT 1 cut(s) 143
CseI GACGC 2 cut(s) 959, 1544
Csp6I GTAC 3 cut(s) 458, 1486, 1530
CspCI CAANNNNNGTGG 2 cut(s) 1140, 1175
CviAII CATG 5 cut(s) 75, 103, 400, 1042, 1387
CviQI GTAC 3 cut(s) 458, 1486, 1530
DdeI CTNAG 7 cut(s) 583, 700, 722, 756, 964, 1018, 1581
DpnI GATC 9 cut(s) 53, 150, 393, 419, 872, 1122, 1172, 1258, 1572
DpnII GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
EaeI YGGCCR 2 cut(s) 3, 87
Eam1104I CTCTTC 2 cut(s) 521, 1301
EarI CTCTTC 2 cut(s) 521, 1301
EciI GGCGGA 1 cut(s) 680
Eco130I CCWWGG 2 cut(s) 235, 645
Eco147I AGGCCT 3 cut(s) 99, 240, 1319
Eco24I GRGCYC 1 cut(s) 655
Eco31I GGTCTC 3 cut(s) 319, 641, 1244
Eco47I GGWCC 4 cut(s) 196, 1208, 1378, 1411
Eco57I CTGAAG 2 cut(s) 1121, 1530
EcoO109I RGGNCCY 5 cut(s) 196, 651, 652, 1208, 1378
EcoRI GAATTC 1 cut(s) 38
EcoRII CCWGG 4 cut(s) 267, 1196, 1380, 1407
EcoT14I CCWWGG 2 cut(s) 235, 645
EcoT22I ATGCAT 1 cut(s) 80
EcoT38I GRGCYC 1 cut(s) 655
ErhI CCWWGG 2 cut(s) 235, 645
FaeI CATG 5 cut(s) 78, 106, 403, 1045, 1390
FalI AAGNNNNNCTT 2 cut(s) 705, 737
FaqI GGGAC 2 cut(s) 1221, 1397
FatI CATG 5 cut(s) 74, 102, 399, 1041, 1386
FauI CCCGC 1 cut(s) 637
Fnu4HI GCNGC 8 cut(s) 87, 294, 381, 384, 946, 954, 1466, 1539
FokI GGATG 5 cut(s) 53, 603, 609, 792, 1415
FriOI GRGCYC 1 cut(s) 655
Fsp4HI GCNGC 8 cut(s) 87, 294, 381, 384, 946, 954, 1466, 1539
FspBI CTAG 3 cut(s) 780, 848, 1214
GlaI GCGC 1 cut(s) 915
GluI GCNGC 8 cut(s) 87, 294, 381, 384, 946, 954, 1466, 1539
GsaI CCCAGC 4 cut(s) 847, 1062, 1266, 1378
GsuI CTGGAG 2 cut(s) 1268, 1480
HaeIII GGCC 7 cut(s) 5, 89, 99, 240, 653, 1319, 1394
HapII CCGG 7 cut(s) 6, 21, 30, 93, 345, 633, 1415
HgaI GACGC 2 cut(s) 959, 1544
HhaI GCGC 1 cut(s) 916
Hin1I GRCGYC 2 cut(s) 117, 1536
Hin1II CATG 5 cut(s) 78, 106, 403, 1045, 1390
Hin6I GCGC 1 cut(s) 914
HinP1I GCGC 1 cut(s) 914
HincII GTYRAC 2 cut(s) 562, 1024
HindII GTYRAC 2 cut(s) 562, 1024
HinfI GANTC 4 cut(s) 730, 835, 891, 1107
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 7 cut(s) 6, 21, 30, 93, 345, 633, 1415
HphI GGTGA 2 cut(s) 46, 523
Hpy166II GTNNAC 3 cut(s) 252, 562, 1024
Hpy188I TCNGA 3 cut(s) 475, 815, 1140
Hpy188III TCNNGA 6 cut(s) 16, 389, 585, 1369, 1432, 1459
Hpy8I GTNNAC 3 cut(s) 252, 562, 1024
Hpy99I CGWCG 5 cut(s) 119, 122, 289, 953, 1041
HpyAV CCTTC 7 cut(s) 701, 720, 1145, 1189, 1330, 1405, 1505
HpyCH4III ACNGT 4 cut(s) 680, 934, 1003, 1279
HpyCH4IV ACGT 4 cut(s) 117, 287, 496, 747
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 219, 290, 452
HpyF3I CTNAG 7 cut(s) 583, 700, 722, 756, 964, 1018, 1581
HpySE526I ACGT 4 cut(s) 117, 287, 496, 747
Hsp92I GRCGYC 2 cut(s) 117, 1536
Hsp92II CATG 5 cut(s) 78, 106, 403, 1045, 1390
HspAI GCGC 1 cut(s) 914
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
KspAI GTTAAC 1 cut(s) 562
Kzo9I GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
LguI GCTCTTC 1 cut(s) 1301
LmnI GCTCC 2 cut(s) 980, 1514
Lsp1109I GCAGC 5 cut(s) 367, 395, 940, 957, 1477
LweI GCATC 3 cut(s) 814, 1362, 1483
MaeI CTAG 3 cut(s) 780, 848, 1214
MaeII ACGT 4 cut(s) 117, 287, 496, 747
MaeIII GTNAC 4 cut(s) 136, 529, 1273, 1576
MalI GATC 9 cut(s) 53, 150, 393, 419, 872, 1122, 1172, 1258, 1572
MboI GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
MflI RGATCY 4 cut(s) 148, 391, 417, 870
MhlI GDGCHC 1 cut(s) 655
MluCI AATT 4 cut(s) 38, 214, 369, 881
MmeI TCCRAC 1 cut(s) 343
Mph1103I ATGCAT 1 cut(s) 80
MroNI GCCGGC 1 cut(s) 29
MroXI GAANNNNTTC 1 cut(s) 167
MseI TTAA 4 cut(s) 278, 375, 561, 1524
MslI CAYNNNNRTG 2 cut(s) 1128, 1560
MspA1I CMGCKG 2 cut(s) 968, 1262
MspI CCGG 7 cut(s) 6, 21, 30, 93, 345, 633, 1415
MspR9I CCNGG 6 cut(s) 269, 346, 1198, 1382, 1409, 1415
Mva1269I GAATGC 1 cut(s) 540
MvaI CCWGG 4 cut(s) 269, 1198, 1382, 1409
MvnI CGCG 4 cut(s) 284, 786, 914, 1370
MwoI GCNNNNNNNGC 4 cut(s) 30, 219, 290, 452
NaeI GCCGGC 1 cut(s) 31
NciI CCSGG 2 cut(s) 346, 1415
NdeII GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
NgoMIV GCCGGC 1 cut(s) 29
NlaIII CATG 5 cut(s) 78, 106, 403, 1045, 1390
NlaIV GGNNCC 8 cut(s) 150, 198, 652, 653, 1209, 1379, 1413, 1516
NmuCI GTSAC 3 cut(s) 529, 1273, 1576
NruI TCGCGA 1 cut(s) 1370
NsiI ATGCAT 1 cut(s) 80
NspI RCATGY 1 cut(s) 1045
PaeI GCATGC 1 cut(s) 1045
PceI AGGCCT 3 cut(s) 99, 240, 1319
PciSI GCTCTTC 1 cut(s) 1301
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 120
PctI GAATGC 1 cut(s) 540
PdiI GCCGGC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 167
PfeI GAWTC 4 cut(s) 730, 835, 891, 1107
PfoI TCCNGGA 1 cut(s) 1413
PkrI GCNGC 8 cut(s) 88, 295, 382, 385, 947, 955, 1467, 1540
Ppu21I YACGTR 1 cut(s) 497
PpuMI RGGWCCY 3 cut(s) 196, 1208, 1378
PshBI ATTAAT 1 cut(s) 1524
PsiI TTATAA 1 cut(s) 974
Psp1406I AACGTT 1 cut(s) 747
Psp5II RGGWCCY 3 cut(s) 196, 1208, 1378
Psp6I CCWGG 4 cut(s) 267, 1196, 1380, 1407
PspFI CCCAGC 4 cut(s) 843, 1058, 1262, 1374
PspGI CCWGG 4 cut(s) 267, 1196, 1380, 1407
PspN4I GGNNCC 8 cut(s) 150, 198, 652, 653, 1209, 1379, 1413, 1516
PspOMI GGGCCC 1 cut(s) 651
PspPI GGNCC 6 cut(s) 196, 651, 652, 1208, 1378, 1411
PspPPI RGGWCCY 3 cut(s) 196, 1208, 1378
PstI CTGCAG 2 cut(s) 246, 385
PstNI CAGNNNCTG 1 cut(s) 983
PsuI RGATCY 4 cut(s) 148, 391, 417, 870
PvuII CAGCTG 2 cut(s) 968, 1262
RruI TCGCGA 1 cut(s) 1370
RsaI GTAC 3 cut(s) 459, 1487, 1531
RsaNI GTAC 3 cut(s) 458, 1486, 1530
RseI CAYNNNNRTG 2 cut(s) 1128, 1560
SapI GCTCTTC 1 cut(s) 1301
SaqAI TTAA 4 cut(s) 278, 375, 561, 1524
SatI GCNGC 8 cut(s) 87, 294, 381, 384, 946, 954, 1466, 1539
Sau3AI GATC 9 cut(s) 51, 148, 391, 417, 870, 1120, 1170, 1256, 1570
Sau96I GGNCC 6 cut(s) 196, 651, 652, 1208, 1378, 1411
ScrFI CCNGG 6 cut(s) 269, 346, 1198, 1382, 1409, 1415
SduI GDGCHC 1 cut(s) 655
SfaNI GCATC 3 cut(s) 814, 1362, 1483
SfcI CTRYAG 3 cut(s) 242, 381, 565
SinI GGWCC 4 cut(s) 196, 1208, 1378, 1411
SmiMI CAYNNNNRTG 2 cut(s) 1128, 1560
SmlI CTYRAG 2 cut(s) 387, 1080
SmoI CTYRAG 2 cut(s) 387, 1080
SphI GCATGC 1 cut(s) 1045
Sse9I AATT 4 cut(s) 38, 214, 369, 881
SseBI AGGCCT 3 cut(s) 99, 240, 1319
SsiI CCGC 6 cut(s) 86, 282, 294, 630, 665, 1539
SspMI CTAG 3 cut(s) 780, 848, 1214
StuI AGGCCT 3 cut(s) 99, 240, 1319
StyD4I CCNGG 6 cut(s) 267, 344, 1196, 1380, 1407, 1413
StyI CCWWGG 2 cut(s) 235, 645
TaaI ACNGT 4 cut(s) 680, 934, 1003, 1279
TaiI ACGT 4 cut(s) 120, 290, 499, 750
TaqI TCGA 4 cut(s) 17, 42, 143, 1053
TasI AATT 4 cut(s) 38, 214, 369, 881
TatI WGTACW 1 cut(s) 1485
TauI GCSGC 3 cut(s) 89, 296, 1541
TfiI GAWTC 4 cut(s) 730, 835, 891, 1107
Tru1I TTAA 4 cut(s) 278, 375, 561, 1524
Tru9I TTAA 4 cut(s) 278, 375, 561, 1524
TscAI CASTG 6 cut(s) 40, 924, 939, 1006, 1251, 1513
TseFI GTSAC 3 cut(s) 529, 1273, 1576
TseI GCWGC 5 cut(s) 380, 383, 945, 953, 1465
Tsp45I GTSAC 3 cut(s) 529, 1273, 1576
TspDTI ATGAA 2 cut(s) 346, 591
TspRI CASTG 6 cut(s) 40, 924, 939, 1006, 1251, 1513
VpaK11BI GGWCC 4 cut(s) 196, 1208, 1378, 1411
VspI ATTAAT 1 cut(s) 1524
XapI RAATTY 1 cut(s) 38
XceI RCATGY 1 cut(s) 1045
XmnI GAANNNNTTC 1 cut(s) 167
XspI CTAG 3 cut(s) 780, 848, 1214
ZraI GACGTC 1 cut(s) 118
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.