Rroxscaffold_5G00360590
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000367
Physical Location & Seq
Forward (+)
41175736 .. 41180588
4853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00360590.1

Sequence Viewer

Length: 1446 bp
ATGGATCCTTTCTTGGAGAAGTTCTTCCCAGTTGTTGCTAGGAAAAAACAGGACCCAAACATTGATAGCAATTACTGCAAATATGATAACCAAGGCCTGCAGTTGTTCACATCTTCACTCTACCTGGCTGGTTTAACCGCGACGTTCGCCGCTTCCTACACCACCAGAAACTTTGGGAGGAGACCCTCTATGCTCATTGCCGGGTGTTTCTTCATAGTTGGAACAATTCTTAATGCTGCAGCTCAAGATCTTGCCATGCTCATCATTGGGAGGATCTTACTTGGTTGTGGAGTTGGTTTTGCCAATCAGGCTGTACCTCTGTTCCTTTCGGAGATTGCACCTACAAGAATACGTGGGGGGCTAAACATACTCTTCCAGCTCAATGTCACCATTGGCATTCTGTTTGCAGGCCTCGTTAACTATGGCAGCAATAAAATCTCAGGAGGATGGGGATGGAGGCTATCATTGGGTTTGGCTGGTTTTCCCGCCGGTCTCCTTACCTTGGGGGCCCTCTTTGTGGTGGAAACACCTAACAGTCTTGTAGAGCGTGGTCGCTTAGAAGAAGGAAAAGCTATACTTAGAAGGATTCGGGGCATTGAGAACGTTGAACCTGAGTTCTTGGAACTTGTTGAGGCTAGTCGCGTGGCTAAAGAAGTGAAGCATCCTTTCAGAAATCTCCTAAAGCGTAGGAATCGCCCCCAGCTAGTCATTGCAGTAGCCTTGCAGATCTTTCAACAATTTACTGGAATCAATGCCATTATGTTTTACGCGCCAGTTTTGTTTGACACATTGGGATTTGGCAACGACGCTGCTCTATACTCAGCTGTTATAACAGGAGCTGTCAATGTTCTCTCCACTGTTGTATCCATCTACTCAGTTGACAAAGTGGGTCGTCGCATACTCTTACTCGAAGCTGGGGTTCAAATGTTCCTGGCTCAAGTGGTTATAGCTATAATACTGGGAATCAAGGTCAAGGATCACAATGATGACCTTCAGAAAGGCTTTGCAATCTTGGTGGTGGTTATGATCTGCACCTTCGTATCTGCCTTTGCCTGGTCTTGGGGACCTCTAGGTTGGCTGATACCAAGTGAGACATTCCCACTGGAGACCAGATCAGCTGGGCAAAGTGTGACCGTCTGCACCAACTTGCTCTTCACTTTTGCGATAGCACAGGCCTTCCTCTCTATGCTTTGCCACTTCAAGTGGGGCATCTTCCTTTTCTTCGCGAGCTGGGTCCTGGTCATGTCAGCCTTCGTGCTATTCCTGGTCCCGGAGACAAAGAACATCCCGATTGAAGAAATGACAGAGAAGGTCTGGAGGCAGCATTGGTTGTGGAAGAAGTACATTGATGGTGACTACCACACTGAAGGAGCCAACATTAATGGTACTGACGCCGCAAAGAAAAATGGACATTCTAATGGATTTGATCCCGTCACTCAGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

481

Amino Acids

53.13

Weight (kDa)

9.03

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 27 - 436 4.5e-116 Sugar (and other) transporter
MFS_1 PF07690 33 - 379 1.6e-24 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000367)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G26340
fragaria_vesca FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 830
AccII CGCG 4 cut(s) 140, 642, 770, 1226
AciI CCGC 4 cut(s) 138, 150, 486, 1395
AclI AACGTT 1 cut(s) 603
AclWI GGATC 4 cut(s) 12, 281, 984, 1421
AcuI CTGAAG 2 cut(s) 977, 1386
AcyI GRCGYC 1 cut(s) 1392
AfaI GTAC 3 cut(s) 315, 1343, 1387
AfiI CCNNNNNNNGG 5 cut(s) 502, 517, 1053, 1059, 1270
AgsI TTSAA 5 cut(s) 608, 734, 923, 1201, 1295
AjnI CCWGG 5 cut(s) 123, 930, 1052, 1236, 1263
AjuI GAANNNNNNNTTGG 2 cut(s) 1136, 1168
Alw26I GTCTC 5 cut(s) 175, 497, 1085, 1100, 1268
AlwI GGATC 4 cut(s) 12, 281, 984, 1421
AlwNI CAGNNNCTG 1 cut(s) 839
AoxI GGCC 4 cut(s) 94, 409, 507, 1173
ApaI GGGCCC 1 cut(s) 511
ApeKI GCWGC 5 cut(s) 236, 239, 426, 809, 1321
AseI ATTAAT 1 cut(s) 1380
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 772
AspS9I GGNCC 6 cut(s) 52, 507, 508, 1064, 1234, 1267
AsuC2I CCSGG 2 cut(s) 202, 1271
AsuHPI GGTGA 2 cut(s) 379, 1364
AvaII GGWCC 4 cut(s) 52, 1064, 1234, 1267
BaeGI GKGCMC 1 cut(s) 511
BaeI ACNNNNGTAYC 4 cut(s) 846, 879, 1023, 1056
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 511
BbvI GCAGC 5 cut(s) 223, 251, 438, 796, 1333
BccI CCATC 4 cut(s) 441, 447, 875, 1343
BciT130I CCWGG 5 cut(s) 125, 932, 1054, 1238, 1265
BciVI GTATCC 1 cut(s) 874
BcnI CCSGG 2 cut(s) 202, 1271
BcoDI GTCTC 5 cut(s) 175, 497, 1085, 1100, 1268
BfaI CTAG 4 cut(s) 39, 636, 704, 1070
BfmI CTRYAG 2 cut(s) 98, 237
BfuI GTATCC 1 cut(s) 874
BglI GCCNNNNNGGC 1 cut(s) 308
BglII AGATCT 2 cut(s) 247, 726
BisI GCNGC 7 cut(s) 150, 237, 240, 427, 810, 1322, 1395
BlsI GCNGC 7 cut(s) 151, 238, 241, 428, 811, 1323, 1396
Bme1390I CCNGG 7 cut(s) 125, 202, 932, 1054, 1238, 1265, 1271
Bme18I GGWCC 4 cut(s) 52, 1064, 1234, 1267
BmgT120I GGNCC 6 cut(s) 52, 507, 508, 1064, 1234, 1267
BmiI GGNNCC 8 cut(s) 6, 54, 508, 509, 1065, 1235, 1269, 1372
BmrFI CCNGG 7 cut(s) 125, 202, 932, 1054, 1238, 1265, 1271
BmrI ACTGGG 2 cut(s) 23, 968
BmsI GCATC 2 cut(s) 670, 1218
BmuI ACTGGG 2 cut(s) 23, 968
BpmI CTGGAG 2 cut(s) 1124, 1336
BpuEI CTTGAG 2 cut(s) 228, 921
BpuMI CCSGG 2 cut(s) 202, 1271
BsaAI YACGTR 1 cut(s) 353
BsaHI GRCGYC 1 cut(s) 1392
BsaI GGTCTC 3 cut(s) 175, 497, 1100
BsaJI CCNNGG 2 cut(s) 91, 501
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 517, 1053, 1059, 1270
Bse118I RCCGGY 1 cut(s) 488
Bse1I ACTGG 5 cut(s) 29, 748, 773, 963, 1107
Bse3DI GCAATG 2 cut(s) 195, 708
BseBI CCWGG 5 cut(s) 125, 932, 1054, 1238, 1265
BseDI CCNNGG 2 cut(s) 91, 501
BseGI GGATG 4 cut(s) 452, 458, 661, 1284
BseLI CCNNNNNNNGG 5 cut(s) 502, 517, 1053, 1059, 1270
BseMI GCAATG 2 cut(s) 195, 708
BseMII CTCAG 4 cut(s) 453, 603, 834, 888
BseNI ACTGG 5 cut(s) 29, 748, 773, 963, 1107
BseRI GAGGAG 1 cut(s) 193
BseSI GKGCMC 1 cut(s) 511
BseXI GCAGC 5 cut(s) 223, 251, 438, 796, 1333
BseYI CCCAGC 4 cut(s) 699, 914, 1118, 1230
BsgI GTGCAG 2 cut(s) 1015, 1123
Bsh1236I CGCG 4 cut(s) 140, 642, 770, 1226
BshFI GGCC 4 cut(s) 96, 411, 509, 1175
BsiSI CCGG 3 cut(s) 201, 489, 1271
BslFI GGGAC 2 cut(s) 1077, 1253
BslI CCNNNNNNNGG 5 cut(s) 502, 517, 1053, 1059, 1270
BsmAI GTCTC 5 cut(s) 175, 497, 1085, 1100, 1268
BsmFI GGGAC 2 cut(s) 1077, 1253
BsmI GAATGC 1 cut(s) 396
BsnI GGCC 4 cut(s) 96, 411, 509, 1175
Bso31I GGTCTC 3 cut(s) 175, 497, 1100
Bsp120I GGGCCC 1 cut(s) 507
Bsp1286I GDGCHC 1 cut(s) 511
Bsp143I GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
Bsp68I TCGCGA 1 cut(s) 1226
BspACI CCGC 4 cut(s) 138, 150, 486, 1395
BspANI GGCC 4 cut(s) 96, 411, 509, 1175
BspCNI CTCAG 4 cut(s) 452, 604, 833, 887
BspFNI CGCG 4 cut(s) 140, 642, 770, 1226
BspLI GGNNCC 8 cut(s) 6, 54, 508, 509, 1065, 1235, 1269, 1372
BspMAI CTGCAG 2 cut(s) 102, 241
BspPI GGATC 4 cut(s) 12, 281, 984, 1421
BspQI GCTCTTC 1 cut(s) 1157
BspTNI GGTCTC 3 cut(s) 175, 497, 1100
BsrDI GCAATG 2 cut(s) 195, 708
BsrFI RCCGGY 1 cut(s) 488
BsrI ACTGG 5 cut(s) 29, 748, 773, 963, 1107
BssAI RCCGGY 1 cut(s) 488
BssECI CCNNGG 2 cut(s) 91, 501
BssMI GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
BssNI GRCGYC 1 cut(s) 1392
BssT1I CCWWGG 2 cut(s) 91, 501
Bst2UI CCWGG 5 cut(s) 125, 932, 1054, 1238, 1265
Bst4CI ACNGT 3 cut(s) 536, 859, 1135
Bst6I CTCTTC 2 cut(s) 377, 1157
BstACI GRCGYC 1 cut(s) 1392
BstAPI GCANNNNNTGC 1 cut(s) 75
BstBAI YACGTR 1 cut(s) 353
BstC8I GCNNGC 3 cut(s) 98, 409, 1228
BstDEI CTNAG 7 cut(s) 439, 556, 578, 612, 820, 874, 1437
BstF5I GGATG 4 cut(s) 452, 458, 661, 1284
BstFNI CGCG 4 cut(s) 140, 642, 770, 1226
BstHHI GCGC 1 cut(s) 772
BstKTI GATC 8 cut(s) 7, 250, 276, 729, 979, 1029, 1115, 1429
BstMAI GTCTC 5 cut(s) 175, 497, 1085, 1100, 1268
BstMBI GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
BstMWI GCNNNNNNNGC 3 cut(s) 75, 146, 308
BstNI CCWGG 5 cut(s) 125, 932, 1054, 1238, 1265
BstSCI CCNGG 7 cut(s) 123, 200, 930, 1052, 1236, 1263, 1269
BstSFI CTRYAG 2 cut(s) 98, 237
BstSLI GKGCMC 1 cut(s) 511
BstUI CGCG 4 cut(s) 140, 642, 770, 1226
BstV1I GCAGC 5 cut(s) 223, 251, 438, 796, 1333
BstX2I RGATCY 4 cut(s) 4, 247, 273, 726
BstYI RGATCY 4 cut(s) 4, 247, 273, 726
BsuI GTATCC 1 cut(s) 874
BsuRI GGCC 4 cut(s) 96, 411, 509, 1175
BtsCI GGATG 4 cut(s) 452, 458, 661, 1284
BtsIMutI CAGTG 3 cut(s) 855, 1100, 1362
BtuMI TCGCGA 1 cut(s) 1226
Cac8I GCNNGC 3 cut(s) 98, 409, 1228
CaiI CAGNNNCTG 1 cut(s) 839
CfoI GCGC 1 cut(s) 772
Cfr10I RCCGGY 1 cut(s) 488
Cfr13I GGNCC 6 cut(s) 52, 507, 508, 1064, 1234, 1267
CseI GACGC 2 cut(s) 815, 1400
Csp6I GTAC 3 cut(s) 314, 1342, 1386
CspCI CAANNNNNGTGG 2 cut(s) 996, 1031
CviAII CATG 2 cut(s) 256, 1243
CviQI GTAC 3 cut(s) 314, 1342, 1386
DdeI CTNAG 7 cut(s) 439, 556, 578, 612, 820, 874, 1437
DpnI GATC 8 cut(s) 6, 249, 275, 728, 978, 1028, 1114, 1428
DpnII GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
Eam1104I CTCTTC 2 cut(s) 377, 1157
EarI CTCTTC 2 cut(s) 377, 1157
Eco130I CCWWGG 2 cut(s) 91, 501
Eco147I AGGCCT 3 cut(s) 96, 411, 1175
Eco24I GRGCYC 1 cut(s) 511
Eco31I GGTCTC 3 cut(s) 175, 497, 1100
Eco47I GGWCC 4 cut(s) 52, 1064, 1234, 1267
Eco57I CTGAAG 2 cut(s) 977, 1386
EcoO109I RGGNCCY 5 cut(s) 52, 507, 508, 1064, 1234
EcoRII CCWGG 5 cut(s) 123, 930, 1052, 1236, 1263
EcoT14I CCWWGG 2 cut(s) 91, 501
EcoT38I GRGCYC 1 cut(s) 511
ErhI CCWWGG 2 cut(s) 91, 501
FaeI CATG 2 cut(s) 259, 1246
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 2 cut(s) 1077, 1253
FatI CATG 2 cut(s) 255, 1242
FauI CCCGC 1 cut(s) 493
Fnu4HI GCNGC 7 cut(s) 150, 237, 240, 427, 810, 1322, 1395
FokI GGATG 4 cut(s) 459, 465, 648, 1271
FriOI GRGCYC 1 cut(s) 511
Fsp4HI GCNGC 7 cut(s) 150, 237, 240, 427, 810, 1322, 1395
FspBI CTAG 4 cut(s) 39, 636, 704, 1070
GlaI GCGC 1 cut(s) 771
GluI GCNGC 7 cut(s) 150, 237, 240, 427, 810, 1322, 1395
GsaI CCCAGC 4 cut(s) 703, 918, 1122, 1234
GsuI CTGGAG 2 cut(s) 1124, 1336
HaeIII GGCC 4 cut(s) 96, 411, 509, 1175
HapII CCGG 3 cut(s) 201, 489, 1271
HgaI GACGC 2 cut(s) 815, 1400
HhaI GCGC 1 cut(s) 772
Hin1I GRCGYC 1 cut(s) 1392
Hin1II CATG 2 cut(s) 259, 1246
Hin6I GCGC 1 cut(s) 770
HinP1I GCGC 1 cut(s) 770
HincII GTYRAC 2 cut(s) 418, 880
HindII GTYRAC 2 cut(s) 418, 880
HinfI GANTC 4 cut(s) 586, 691, 747, 963
HpaI GTTAAC 1 cut(s) 418
HpaII CCGG 3 cut(s) 201, 489, 1271
HphI GGTGA 2 cut(s) 379, 1364
Hpy166II GTNNAC 3 cut(s) 108, 418, 880
Hpy188I TCNGA 3 cut(s) 331, 671, 996
Hpy188III TCNNGA 5 cut(s) 245, 441, 1225, 1288, 1315
Hpy8I GTNNAC 3 cut(s) 108, 418, 880
Hpy99I CGWCG 3 cut(s) 145, 809, 897
HpyAV CCTTC 8 cut(s) 557, 576, 1001, 1045, 1186, 1261, 1303, 1361
HpyCH4III ACNGT 3 cut(s) 536, 859, 1135
HpyCH4IV ACGT 3 cut(s) 143, 352, 603
HpyF10VI GCNNNNNNNGC 3 cut(s) 75, 146, 308
HpyF3I CTNAG 7 cut(s) 439, 556, 578, 612, 820, 874, 1437
HpySE526I ACGT 3 cut(s) 143, 352, 603
Hsp92I GRCGYC 1 cut(s) 1392
Hsp92II CATG 2 cut(s) 259, 1246
HspAI GCGC 1 cut(s) 770
KspAI GTTAAC 1 cut(s) 418
Kzo9I GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
LguI GCTCTTC 1 cut(s) 1157
LmnI GCTCC 2 cut(s) 836, 1370
Lsp1109I GCAGC 5 cut(s) 223, 251, 438, 796, 1333
LweI GCATC 2 cut(s) 670, 1218
MaeI CTAG 4 cut(s) 39, 636, 704, 1070
MaeII ACGT 3 cut(s) 143, 352, 603
MaeIII GTNAC 4 cut(s) 385, 1129, 1352, 1432
MalI GATC 8 cut(s) 6, 249, 275, 728, 978, 1028, 1114, 1428
MboI GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
MflI RGATCY 4 cut(s) 4, 247, 273, 726
MhlI GDGCHC 1 cut(s) 511
MluCI AATT 3 cut(s) 70, 225, 737
MmeI TCCRAC 1 cut(s) 199
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 4 cut(s) 134, 231, 417, 1380
MslI CAYNNNNRTG 2 cut(s) 984, 1416
MspA1I CMGCKG 2 cut(s) 824, 1118
MspI CCGG 3 cut(s) 201, 489, 1271
MspR9I CCNGG 7 cut(s) 125, 202, 932, 1054, 1238, 1265, 1271
Mva1269I GAATGC 1 cut(s) 396
MvaI CCWGG 5 cut(s) 125, 932, 1054, 1238, 1265
MvnI CGCG 4 cut(s) 140, 642, 770, 1226
MwoI GCNNNNNNNGC 3 cut(s) 75, 146, 308
NciI CCSGG 2 cut(s) 202, 1271
NdeII GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
NlaIII CATG 2 cut(s) 259, 1246
NlaIV GGNNCC 8 cut(s) 6, 54, 508, 509, 1065, 1235, 1269, 1372
NmuCI GTSAC 4 cut(s) 385, 1129, 1352, 1432
NruI TCGCGA 1 cut(s) 1226
PceI AGGCCT 3 cut(s) 96, 411, 1175
PciSI GCTCTTC 1 cut(s) 1157
PctI GAATGC 1 cut(s) 396
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 4 cut(s) 586, 691, 747, 963
PfoI TCCNGGA 1 cut(s) 1269
PkrI GCNGC 7 cut(s) 151, 238, 241, 428, 811, 1323, 1396
Ppu21I YACGTR 1 cut(s) 353
PpuMI RGGWCCY 3 cut(s) 52, 1064, 1234
PshBI ATTAAT 1 cut(s) 1380
PsiI TTATAA 1 cut(s) 830
Psp1406I AACGTT 1 cut(s) 603
Psp5II RGGWCCY 3 cut(s) 52, 1064, 1234
Psp6I CCWGG 5 cut(s) 123, 930, 1052, 1236, 1263
PspFI CCCAGC 4 cut(s) 699, 914, 1118, 1230
PspGI CCWGG 5 cut(s) 123, 930, 1052, 1236, 1263
PspN4I GGNNCC 8 cut(s) 6, 54, 508, 509, 1065, 1235, 1269, 1372
PspOMI GGGCCC 1 cut(s) 507
PspPI GGNCC 6 cut(s) 52, 507, 508, 1064, 1234, 1267
PspPPI RGGWCCY 3 cut(s) 52, 1064, 1234
PstI CTGCAG 2 cut(s) 102, 241
PstNI CAGNNNCTG 1 cut(s) 839
PsuI RGATCY 4 cut(s) 4, 247, 273, 726
PvuII CAGCTG 2 cut(s) 824, 1118
RruI TCGCGA 1 cut(s) 1226
RsaI GTAC 3 cut(s) 315, 1343, 1387
RsaNI GTAC 3 cut(s) 314, 1342, 1386
RseI CAYNNNNRTG 2 cut(s) 984, 1416
SapI GCTCTTC 1 cut(s) 1157
SaqAI TTAA 4 cut(s) 134, 231, 417, 1380
SatI GCNGC 7 cut(s) 150, 237, 240, 427, 810, 1322, 1395
Sau3AI GATC 8 cut(s) 4, 247, 273, 726, 976, 1026, 1112, 1426
Sau96I GGNCC 6 cut(s) 52, 507, 508, 1064, 1234, 1267
ScrFI CCNGG 7 cut(s) 125, 202, 932, 1054, 1238, 1265, 1271
SduI GDGCHC 1 cut(s) 511
SfaNI GCATC 2 cut(s) 670, 1218
SfcI CTRYAG 2 cut(s) 98, 237
SinI GGWCC 4 cut(s) 52, 1064, 1234, 1267
SmiMI CAYNNNNRTG 2 cut(s) 984, 1416
SmlI CTYRAG 2 cut(s) 243, 936
SmoI CTYRAG 2 cut(s) 243, 936
Sse9I AATT 3 cut(s) 70, 225, 737
SseBI AGGCCT 3 cut(s) 96, 411, 1175
SsiI CCGC 4 cut(s) 138, 150, 486, 1395
SspMI CTAG 4 cut(s) 39, 636, 704, 1070
StuI AGGCCT 3 cut(s) 96, 411, 1175
StyD4I CCNGG 7 cut(s) 123, 200, 930, 1052, 1236, 1263, 1269
StyI CCWWGG 2 cut(s) 91, 501
TaaI ACNGT 3 cut(s) 536, 859, 1135
TaiI ACGT 3 cut(s) 146, 355, 606
TaqI TCGA 1 cut(s) 909
TasI AATT 3 cut(s) 70, 225, 737
TatI WGTACW 1 cut(s) 1341
TauI GCSGC 2 cut(s) 152, 1397
TfiI GAWTC 4 cut(s) 586, 691, 747, 963
Tru1I TTAA 4 cut(s) 134, 231, 417, 1380
Tru9I TTAA 4 cut(s) 134, 231, 417, 1380
TscAI CASTG 3 cut(s) 862, 1107, 1369
TseFI GTSAC 4 cut(s) 385, 1129, 1352, 1432
TseI GCWGC 5 cut(s) 236, 239, 426, 809, 1321
Tsp45I GTSAC 4 cut(s) 385, 1129, 1352, 1432
TspDTI ATGAA 1 cut(s) 202
TspRI CASTG 3 cut(s) 862, 1107, 1369
VpaK11BI GGWCC 4 cut(s) 52, 1064, 1234, 1267
VspI ATTAAT 1 cut(s) 1380
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 4 cut(s) 39, 636, 704, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.