Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000367

Physical Location & Seq

Genomic Coordinates Forward (+)

41117266 .. 41120768

Gene Structure 3503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00360580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGAGCGACCGGCGAGCCTCGTTCCGAGCTCAACCAAAGAAACCCGAAGTCGTGCCGACGTCGGAGCCGCGATTTCCGGCCGGGTCGAAAACTCAAACCGGCGCCGCCTTGCTGCACCACCGTGGGCTCGAATCGTCGACGGCGACCACCACAGGGACGATCGGAAGGAGGAGGCGACCCCGCCGGTGAAGTTTCGTCGCCGGAGGTGGCCGGAGCCGGAAGTTACGGCCGGGTCGGATCGGCCGGGTCCGGGAGGTGGAGATTTTGAGGCCAAGATCACGCCTCTTGTGATCATTTCTTGCATAATGGCAGCTAGTGGAGGACTCATGTTTGGCTACGATATTGGTATTTCAGGCGGTGTCACATCAATGCCCGATTTTCTAAAGAAATTCTTCCCAGTTGTATATAAGAAGCAACAAACTCCAGGACTTGATAGCAATTACTGCAAATACGATAATCAAGGGCTACAACTGTTCACATCTTCGTTGTACCTCGCTGCTTTAATGGCAACTTTTGTTGCATCGTACTCAACCAAAATGCTAGGCCGAAAGATGACCATGTTGATTGCTGGGATTTTCTTTTGTGTGGGAACAGTTTTTAATGCTGCAGCTCATAACCTTGCGATGCTCATTATTGGGAGGATCGTACTTGGTTGTGGAGTTGGATTTGCTAACCAGGCGATTCCACTTTTCCTATCCGAGGTCGCACCCACAAGAATTCGGGGGGCACTTAACATACTCTTCCAGCTCAATATTACTATTGGCATTCTGGTTGCAAACCTTATCAATTACGGAACTGCCAAACTAACTGACGGAACGGGATGGAGAATATCACTAGGTTTGGCTGGCGTTCCAGCATTTATGCTAACTGTGGGGTCTCTTATTGTGGTAGACACTCCTAATAGTTTGATCCAACGAGGTCAGTTGGAGGCAGGAAAAGCAGTTCTTAAAAGGATCCGAGGTATTGACAATGTCGATCCAGAATACCTGGAGATTGTTGAGGCAAGTCGGGTGGCTGCAGAAGTGAAGAATCCCTTCAGAAATCTTCTTAAGCGTAGGAACCAGCCTTCTTTGATCATTGGAATAATGATGCAGGTTTTCCAACAATTCACTGGCATTAATGCAATCATGTTTTATGCACCAGTCTTGTTCCAGACCTTGGGATTTAAGAGTGATGCATCTCTCTATTCAGCTGTCATAACAGGACTCGTCAATGTCCTGTCAACTGTTGTATCAATCGTCATTGTGGACAAAGCTGGTCGCCGCATGCTTTTGCTAGAAGCTGGTGTCCAAATGTTCCTTTCACAAATGGGCGTTGCAGTGGTGATGGGACTGAAAGTTAAGGATACAACCAACACCCTCGGACATGGCTTGGGAATTCTTGTGGTAATTTTGATCTGCAGTTTTGTGGCTTCCTTTGCATGGTCTTGGGGACCTCTAGGGTGGTTGATACCAAGTGAGACATTTGCCCTTGAGGCTCGCTCTGCAGGGCAGAGTATTGCTGTTTTTACCAACATGCTCTTCACATTTATTATAGCACAGGCTTTCCTCTCAATGCTTTGCAAAATGAAGTCCGGCATATTCTTTTTCTTCTCAGCCTGGGTACTTCTCATGACACTCTTTACAGTCTTCTTAATTCCTGAGACCAAGAATGTCCCTATTGAAGAGATGAATGACCGAGTGTGGAAGAAGCACTGGTTCTGGAAGAGATTCATGGATGAATGGGATATGGAGGCACCCAAAGGGCATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005356 GO:0005358 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0009414 GO:0009415 GO:0009506 GO:0009628 GO:0009651 GO:0009679 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030054 GO:0033993 GO:0034219 GO:0034220 GO:0042221 GO:0044464 GO:0046323 GO:0050896 GO:0051119 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901700 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

584

Amino Acids

64.18

Weight (kDa)

9.58

Isoelectric Point (pI)

35.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	101 - 558	3.4e-121	Sugar (and other) transporter
MFS_1	PF07690	155 - 511	6.2e-22	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26340
fragaria_vesca	FvH4_2g38270 FvH4_4g15150 FvH4_4g15160 FvH4_4g15170 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15172 FvH4_4g15180 FvH4_4g15220 FvH4_4g15221
malus_domestica	MD13G1189100.v1.1 MD13G1189500.v1.1 MD13G1189600.v1.1 MD13G1189800.v1.1 MD13G1190100.v1.1 MD13G1190200.v1.1 MD13G1190300.v1.1 MD16G1189900.v1.1 MD16G1190000.v1.1 MD16G1190100.v1.1 MD16G1190300.v1.1
prunus_persica	Prupe.1G156300_v2.0.a1 Prupe.1G156300_v2.0.a1 Prupe.1G156400_v2.0.a1 Prupe.1G156500_v2.0.a1 Prupe.1G156600_v2.0.a1 Prupe.1G156700_v2.0.a1 Prupe.1G156800_v2.0.a1 Prupe.1G156900_v2.0.a1 Prupe.1G157000_v2.0.a1
pyrus_communis	pycom13g16350 pycom13g16370 pycom13g16380 pycom16g15990 pycom16g16010 pycom16g16020
rosa_chinensis	RchiOBHm_Chr4g0413631 RchiOBHm_Chr4g0416271 RchiOBHm_Chr4g0416631 RchiOBHm_Chr4g0416651 RchiOBHm_Chr4g0416671 RchiOBHm_Chr4g0416681 RchiOBHm_Chr4g0416691 RchiOBHm_Chr4g0416721
rosa_laevigata	RLG00000007958 RLG00000007959 RLG00000007960 RLG00000007961 RLG00000007963 RLG00000007964 RLG00000008204
rosa_multiflora	Rmu_ssc0000377.1_g000001 Rmu_ssc0000377.1_g000007 Rmu_ssc0000377.1_g000017 Rmu_ssc0000377.1_g000025 Rmu_ssc0000377.1_g000041 Rmu_ssc0000377.1_g000043
rosa_roxburghii	Rroxscaffold_5G00357580 Rroxscaffold_5G00360530 Rroxscaffold_5G00360560 Rroxscaffold_5G00360580 Rroxscaffold_5G00360590
rosa_rugosa	Rorug04G0121900 Rorug04G0143800 Rorug04G0143900 Rorug04G0144000 Rorug04G0144000 Rorug04G0144100
rosa_samantha	Rh4AG181300 Rh4AG206000 Rh4AG206100 Rh4AG206200 Rh4AG206300 Rh4AG206500 Rh4AG206700 Rh4BG180600 Rh4BG203400 Rh4BG203500 Rh4BG203600 Rh4BG203700 Rh4BG203800 Rh4BG203900 Rh4BG204000 Rh4CG192500 Rh4CG216900 Rh4CG217200 Rh4CG217500 Rh4CG217700 Rh4CG217800 Rh4DG176700 Rh4DG202900 Rh4DG203000 Rh4DG203200 Rh4DG203300 Rh4DG203900
rosa_wichuraiana	Rw4G015160 Rw4G017430 Rw4G017440 Rw4G017450 Rw4G017460 Rw4G017480 Rw4G017490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	63
Acc36I	ACCTGC	1 cut(s)	1084
AccB1I	GGYRCC	2 cut(s)	102, 1735
AccB7I	CCANNNNNTGG	1 cut(s)	1159
AccI	GTMKAC	2 cut(s)	138, 891
AccII	CGCG	1 cut(s)	71
AciI	CCGC	5 cut(s)	69, 106, 182, 357, 1264
AclWI	GGATC	6 cut(s)	246, 650, 904, 949, 962, 971
AcoI	YGGCCR	4 cut(s)	79, 209, 228, 242
AcsI	RAATTY	3 cut(s)	389, 717, 1377
AcuI	CTGAAG	1 cut(s)	1021
AcyI	GRCGYC	2 cut(s)	60, 103
AfaI	GTAC	4 cut(s)	491, 527, 648, 1605
AfiI	CCNNNNNNNGG	6 cut(s)	154, 251, 257, 700, 1159, 1422
AflII	CTTAAG	1 cut(s)	1049
AgsI	TTSAA	1 cut(s)	1664
AjnI	CCWGG	4 cut(s)	424, 675, 987, 1598
AjuI	GAANNNNNNNTTGG	2 cut(s)	1505, 1537
AleI	CACNNNNGTG	1 cut(s)	121
AloI	GAACNNNNNNTCC	2 cut(s)	927, 959
AluBI	AGCT	7 cut(s)	30, 314, 611, 748, 1193, 1256, 1283
AluI	AGCT	7 cut(s)	30, 314, 611, 748, 1193, 1256, 1283
Alw21I	GWGCWC	1 cut(s)	32
Alw26I	GTCTC	3 cut(s)	882, 1454, 1637
AlwI	GGATC	6 cut(s)	246, 650, 904, 949, 962, 971
AoxI	GGCC	6 cut(s)	79, 209, 228, 242, 270, 544
ApeKI	GCWGC	6 cut(s)	113, 311, 497, 605, 608, 1016
ApoI	RAATTY	3 cut(s)	389, 717, 1377
AseI	ATTAAT	1 cut(s)	1119
Asp700I	GAANNNNTTC	3 cut(s)	392, 1034, 1709
AspLEI	GCGC	1 cut(s)	105
AspS9I	GGNCC	2 cut(s)	248, 1433
AsuC2I	CCSGG	4 cut(s)	83, 232, 246, 252
AsuHPI	GGTGA	2 cut(s)	199, 1336
AvaII	GGWCC	2 cut(s)	248, 1433
BaeGI	GKGCMC	1 cut(s)	730
BaeI	ACNNNNGTAYC	2 cut(s)	1215, 1248
BamHI	GGATCC	1 cut(s)	954
BanI	GGYRCC	2 cut(s)	102, 1735
BanII	GRGCYC	2 cut(s)	32, 130
BbsI	GAAGAC	1 cut(s)	1621
Bbv12I	GWGCWC	1 cut(s)	32
BbvI	GCAGC	6 cut(s)	100, 323, 484, 592, 620, 1003
BccI	CCATC	2 cut(s)	816, 1321
BceAI	ACGGC	2 cut(s)	157, 243
BciT130I	CCWGG	4 cut(s)	426, 677, 989, 1600
BciVI	GTATCC	1 cut(s)	1339
BclI	TGATCA	2 cut(s)	291, 1074
BcnI	CCSGG	4 cut(s)	83, 232, 246, 252
BcoDI	GTCTC	3 cut(s)	882, 1454, 1637
BfaI	CTAG	5 cut(s)	315, 542, 836, 1277, 1439
BfmI	CTRYAG	4 cut(s)	606, 1017, 1399, 1485
BfoI	RGCGCY	1 cut(s)	106
BfrI	CTTAAG	1 cut(s)	1049
BfuAI	ACCTGC	1 cut(s)	1084
BfuI	GTATCC	1 cut(s)	1339
BglI	GCCNNNNNGGC	1 cut(s)	1475
BisI	GCNGC	9 cut(s)	69, 106, 114, 312, 498, 606, 609, 1017, 1264
BlsI	GCNGC	9 cut(s)	70, 107, 115, 313, 499, 607, 610, 1018, 1265
Bme1390I	CCNGG	8 cut(s)	83, 232, 246, 252, 426, 677, 989, 1600
Bme18I	GGWCC	2 cut(s)	248, 1433
BmgT120I	GGNCC	2 cut(s)	248, 1433
BmiI	GGNNCC	8 cut(s)	67, 104, 216, 249, 956, 1061, 1434, 1737
BmrFI	CCNGG	8 cut(s)	83, 232, 246, 252, 426, 677, 989, 1600
BmrI	ACTGGG	1 cut(s)	392
BmsI	GCATC	5 cut(s)	530, 615, 1080, 1165, 1187
BmuI	ACTGGG	1 cut(s)	392
BpiI	GAAGAC	1 cut(s)	1621
BplI	GAGNNNNNCTC	2 cut(s)	1466, 1498
BpmI	CTGGAG	2 cut(s)	408, 1010
BpuEI	CTTGAG	1 cut(s)	1493
BpuMI	CCSGG	4 cut(s)	83, 232, 246, 252
BsaHI	GRCGYC	2 cut(s)	60, 103
BsaI	GGTCTC	2 cut(s)	882, 1637
BsaJI	CCNNGG	6 cut(s)	122, 699, 958, 1158, 1360, 1599
Bsc4I	CCNNNNNNNGG	6 cut(s)	154, 251, 257, 700, 1159, 1422
Bse118I	RCCGGY	3 cut(s)	10, 99, 184
Bse1I	ACTGG	4 cut(s)	398, 1117, 1142, 1700
BseBI	CCWGG	4 cut(s)	426, 677, 989, 1600
BseDI	CCNNGG	6 cut(s)	122, 699, 958, 1158, 1360, 1599
BseGI	GGATG	2 cut(s)	827, 1723
BseLI	CCNNNNNNNGG	6 cut(s)	154, 251, 257, 700, 1159, 1422
BseMII	CTCAG	2 cut(s)	1608, 1632
BseNI	ACTGG	4 cut(s)	398, 1117, 1142, 1700
BseRI	GAGGAG	1 cut(s)	185
BseSI	GKGCMC	1 cut(s)	730
BseX3I	CGGCCG	3 cut(s)	79, 228, 242
BseXI	GCAGC	6 cut(s)	100, 323, 484, 592, 620, 1003
BseYI	CCCAGC	1 cut(s)	569
BsgI	GTGCAG	1 cut(s)	99
Bsh1236I	CGCG	1 cut(s)	71
Bsh1285I	CGRYCG	5 cut(s)	11, 82, 163, 231, 245
BshFI	GGCC	6 cut(s)	81, 211, 230, 244, 272, 546
BshNI	GGYRCC	2 cut(s)	102, 1735
BsiEI	CGRYCG	5 cut(s)	11, 82, 163, 231, 245
BsiHKAI	GWGCWC	1 cut(s)	32
BslFI	GGGAC	4 cut(s)	170, 1344, 1446, 1640
BslI	CCNNNNNNNGG	6 cut(s)	154, 251, 257, 700, 1159, 1422
BsmAI	GTCTC	3 cut(s)	882, 1454, 1637
BsmFI	GGGAC	4 cut(s)	170, 1344, 1446, 1640
BsmI	GAATGC	1 cut(s)	765
BsnI	GGCC	6 cut(s)	81, 211, 230, 244, 272, 546
Bso31I	GGTCTC	2 cut(s)	882, 1637
Bsp1286I	GDGCHC	3 cut(s)	32, 130, 730
BspACI	CCGC	5 cut(s)	69, 106, 182, 357, 1264
BspANI	GGCC	6 cut(s)	81, 211, 230, 244, 272, 546
BspCNI	CTCAG	2 cut(s)	1607, 1633
BspFNI	CGCG	1 cut(s)	71
BspHI	TCATGA	1 cut(s)	1611
BspLI	GGNNCC	8 cut(s)	67, 104, 216, 249, 956, 1061, 1434, 1737
BspMAI	CTGCAG	4 cut(s)	610, 1021, 1403, 1489
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	6 cut(s)	246, 650, 904, 949, 962, 971
BspQI	GCTCTTC	1 cut(s)	1526
BspT107I	GGYRCC	2 cut(s)	102, 1735
BspTI	CTTAAG	1 cut(s)	1049
BspTNI	GGTCTC	2 cut(s)	882, 1637
BsrFI	RCCGGY	3 cut(s)	10, 99, 184
BsrI	ACTGG	4 cut(s)	398, 1117, 1142, 1700
BssAI	RCCGGY	3 cut(s)	10, 99, 184
BssECI	CCNNGG	6 cut(s)	122, 699, 958, 1158, 1360, 1599
BssNI	GRCGYC	2 cut(s)	60, 103
BssT1I	CCWWGG	1 cut(s)	1158
Bst2UI	CCWGG	4 cut(s)	426, 677, 989, 1600
Bst4CI	ACNGT	6 cut(s)	123, 474, 595, 871, 1228, 1627
Bst6I	CTCTTC	4 cut(s)	746, 1526, 1659, 1700
BstACI	GRCGYC	2 cut(s)	60, 103
BstAFI	CTTAAG	1 cut(s)	1049
BstAPI	GCANNNNNTGC	1 cut(s)	444
BstC8I	GCNNGC	5 cut(s)	16, 847, 1268, 1480, 1749
BstDEI	CTNAG	2 cut(s)	1594, 1641
BstDSI	CCRYGG	1 cut(s)	122
BstENI	CCTNNNNNAGG	1 cut(s)	698
BstF5I	GGATG	2 cut(s)	827, 1723
BstFNI	CGCG	1 cut(s)	71
BstH2I	RGCGCY	1 cut(s)	106
BstHHI	GCGC	1 cut(s)	105
BstMAI	GTCTC	3 cut(s)	882, 1454, 1637
BstMCI	CGRYCG	5 cut(s)	11, 82, 163, 231, 245
BstMWI	GCNNNNNNNGC	7 cut(s)	444, 506, 677, 938, 1418, 1475, 1484
BstNI	CCWGG	4 cut(s)	426, 677, 989, 1600
BstNSI	RCATGY	3 cut(s)	1270, 1519, 1751
BstSCI	CCNGG	8 cut(s)	81, 230, 244, 250, 424, 675, 987, 1598
BstSFI	CTRYAG	4 cut(s)	606, 1017, 1399, 1485
BstSLI	GKGCMC	1 cut(s)	730
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	6 cut(s)	100, 323, 484, 592, 620, 1003
BstV2I	GAAGAC	1 cut(s)	1621
BstX2I	RGATCY	1 cut(s)	954
BstYI	RGATCY	1 cut(s)	954
BstZI	CGGCCG	3 cut(s)	79, 228, 242
BsuI	GTATCC	1 cut(s)	1339
BsuRI	GGCC	6 cut(s)	81, 211, 230, 244, 272, 546
BtgI	CCRYGG	1 cut(s)	122
BtgZI	GCGATG	1 cut(s)	638
BtsCI	GGATG	2 cut(s)	827, 1723
BtsI	GCAGTG	1 cut(s)	1326
BtsIMutI	CAGTG	3 cut(s)	1110, 1326, 1693
BveI	ACCTGC	1 cut(s)	1084
Cac8I	GCNNGC	5 cut(s)	16, 847, 1268, 1480, 1749
CciI	TCATGA	1 cut(s)	1611
CfoI	GCGC	1 cut(s)	105
Cfr10I	RCCGGY	3 cut(s)	10, 99, 184
Cfr13I	GGNCC	2 cut(s)	248, 1433
Csp6I	GTAC	4 cut(s)	490, 526, 647, 1604
CspCI	CAANNNNNGTGG	2 cut(s)	993, 1028
CviQI	GTAC	4 cut(s)	490, 526, 647, 1604
DdeI	CTNAG	2 cut(s)	1594, 1641
DinI	GGCGCC	1 cut(s)	104
EaeI	YGGCCR	4 cut(s)	79, 209, 228, 242
EagI	CGGCCG	3 cut(s)	79, 228, 242
Eam1104I	CTCTTC	4 cut(s)	746, 1526, 1659, 1700
EarI	CTCTTC	4 cut(s)	746, 1526, 1659, 1700
Ecl136II	GAGCTC	1 cut(s)	30
EclXI	CGGCCG	3 cut(s)	79, 228, 242
Eco130I	CCWWGG	1 cut(s)	1158
Eco24I	GRGCYC	2 cut(s)	32, 130
Eco31I	GGTCTC	2 cut(s)	882, 1637
Eco47I	GGWCC	2 cut(s)	248, 1433
Eco52I	CGGCCG	3 cut(s)	79, 228, 242
Eco53kI	GAGCTC	1 cut(s)	30
Eco57I	CTGAAG	1 cut(s)	1021
EcoICRI	GAGCTC	1 cut(s)	30
EcoNI	CCTNNNNNAGG	1 cut(s)	698
EcoO109I	RGGNCCY	1 cut(s)	1433
EcoRI	GAATTC	2 cut(s)	717, 1377
EcoRII	CCWGG	4 cut(s)	424, 675, 987, 1598
EcoT14I	CCWWGG	1 cut(s)	1158
EcoT22I	ATGCAT	1 cut(s)	1180
EcoT38I	GRGCYC	2 cut(s)	32, 130
EgeI	GGCGCC	1 cut(s)	104
EheI	GGCGCC	1 cut(s)	104
ErhI	CCWWGG	1 cut(s)	1158
FalI	AAGNNNNNCTT	6 cut(s)	377, 409, 930, 962, 1019, 1051
FaqI	GGGAC	4 cut(s)	170, 1344, 1446, 1640
FauI	CCCGC	1 cut(s)	189
FbaI	TGATCA	2 cut(s)	291, 1074
FblI	GTMKAC	2 cut(s)	138, 891
Fnu4HI	GCNGC	9 cut(s)	69, 106, 114, 312, 498, 606, 609, 1017, 1264
FokI	GGATG	2 cut(s)	834, 1730
FriOI	GRGCYC	2 cut(s)	32, 130
Fsp4HI	GCNGC	9 cut(s)	69, 106, 114, 312, 498, 606, 609, 1017, 1264
FspBI	CTAG	5 cut(s)	315, 542, 836, 1277, 1439
GlaI	GCGC	1 cut(s)	104
GluI	GCNGC	9 cut(s)	69, 106, 114, 312, 498, 606, 609, 1017, 1264
GsaI	CCCAGC	1 cut(s)	573
GsuI	CTGGAG	2 cut(s)	408, 1010
HaeII	RGCGCY	1 cut(s)	106
HaeIII	GGCC	6 cut(s)	81, 211, 230, 244, 272, 546
HhaI	GCGC	1 cut(s)	105
Hin1I	GRCGYC	2 cut(s)	60, 103
Hin6I	GCGC	1 cut(s)	103
HinP1I	GCGC	1 cut(s)	103
HincII	GTYRAC	2 cut(s)	139, 1224
HindII	GTYRAC	2 cut(s)	139, 1224
HinfI	GANTC	6 cut(s)	132, 324, 682, 1030, 1206, 1710
HphI	GGTGA	2 cut(s)	199, 1336
Hpy166II	GTNNAC	5 cut(s)	139, 477, 892, 1224, 1249
Hpy188I	TCNGA	8 cut(s)	27, 65, 165, 238, 700, 959, 1040, 1364
Hpy188III	TCNNGA	5 cut(s)	980, 1153, 1612, 1640, 1702
Hpy8I	GTNNAC	5 cut(s)	139, 477, 892, 1224, 1249
Hpy99I	CGWCG	5 cut(s)	62, 65, 140, 143, 201
HpyAV	CCTTC	3 cut(s)	160, 1045, 1077
HpyCH4III	ACNGT	6 cut(s)	123, 474, 595, 871, 1228, 1627
HpyCH4IV	ACGT	1 cut(s)	60
HpyF10VI	GCNNNNNNNGC	7 cut(s)	444, 506, 677, 938, 1418, 1475, 1484
HpyF3I	CTNAG	2 cut(s)	1594, 1641
HpySE526I	ACGT	1 cut(s)	60
Hsp92I	GRCGYC	2 cut(s)	60, 103
HspAI	GCGC	1 cut(s)	103
KasI	GGCGCC	1 cut(s)	102
Ksp22I	TGATCA	2 cut(s)	291, 1074
LguI	GCTCTTC	1 cut(s)	1526
LmnI	GCTCC	3 cut(s)	4, 65, 214
Lsp1109I	GCAGC	6 cut(s)	100, 323, 484, 592, 620, 1003
LweI	GCATC	5 cut(s)	530, 615, 1080, 1165, 1187
MaeI	CTAG	5 cut(s)	315, 542, 836, 1277, 1439
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	2 cut(s)	223, 361
MflI	RGATCY	1 cut(s)	954
MhlI	GDGCHC	3 cut(s)	32, 130, 730
MluCI	AATT	8 cut(s)	389, 439, 717, 787, 1106, 1377, 1389, 1635
Mly113I	GGCGCC	1 cut(s)	103
MlyI	GAGTC	2 cut(s)	318, 1200
MmeI	TCCRAC	6 cut(s)	43, 216, 643, 906, 937, 1126
Mph1103I	ATGCAT	1 cut(s)	1180
MroXI	GAANNNNTTC	3 cut(s)	392, 1034, 1709
MseI	TTAA	9 cut(s)	503, 600, 732, 948, 1050, 1119, 1167, 1341, 1634
MslI	CAYNNNNRTG	2 cut(s)	121, 368
MspA1I	CMGCKG	1 cut(s)	1193
MspCI	CTTAAG	1 cut(s)	1049
MspR9I	CCNGG	8 cut(s)	83, 232, 246, 252, 426, 677, 989, 1600
Mva1269I	GAATGC	1 cut(s)	765
MvaI	CCWGG	4 cut(s)	426, 677, 989, 1600
MvnI	CGCG	1 cut(s)	71
MwoI	GCNNNNNNNGC	7 cut(s)	444, 506, 677, 938, 1418, 1475, 1484
NarI	GGCGCC	1 cut(s)	103
NciI	CCSGG	4 cut(s)	83, 232, 246, 252
NlaIV	GGNNCC	8 cut(s)	67, 104, 216, 249, 956, 1061, 1434, 1737
NmuCI	GTSAC	1 cut(s)	361
NsiI	ATGCAT	1 cut(s)	1180
NspI	RCATGY	3 cut(s)	1270, 1519, 1751
OliI	CACNNNNGTG	1 cut(s)	121
PaeI	GCATGC	2 cut(s)	1270, 1751
PagI	TCATGA	1 cut(s)	1611
PciSI	GCTCTTC	1 cut(s)	1526
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	1 cut(s)	765
PdmI	GAANNNNTTC	3 cut(s)	392, 1034, 1709
PfeI	GAWTC	4 cut(s)	132, 682, 1030, 1710
PflFI	GACNNNGTC	1 cut(s)	971
PflMI	CCANNNNNTGG	1 cut(s)	1159
PfoI	TCCNGGA	2 cut(s)	250, 424
PkrI	GCNGC	9 cut(s)	70, 107, 115, 313, 499, 607, 610, 1018, 1265
Ple19I	CGATCG	1 cut(s)	163
PleI	GAGTC	2 cut(s)	318, 1200
PluTI	GGCGCC	1 cut(s)	106
PpsI	GAGTC	2 cut(s)	318, 1200
PpuMI	RGGWCCY	1 cut(s)	1433
PshBI	ATTAAT	1 cut(s)	1119
Psp124BI	GAGCTC	1 cut(s)	32
Psp5II	RGGWCCY	1 cut(s)	1433
Psp6I	CCWGG	4 cut(s)	424, 675, 987, 1598
PspFI	CCCAGC	1 cut(s)	569
PspGI	CCWGG	4 cut(s)	424, 675, 987, 1598
PspN4I	GGNNCC	8 cut(s)	67, 104, 216, 249, 956, 1061, 1434, 1737
PspPI	GGNCC	2 cut(s)	248, 1433
PspPPI	RGGWCCY	1 cut(s)	1433
PstI	CTGCAG	4 cut(s)	610, 1021, 1403, 1489
PsuI	RGATCY	1 cut(s)	954
PsyI	GACNNNGTC	1 cut(s)	971
PvuI	CGATCG	1 cut(s)	163
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	4 cut(s)	491, 527, 648, 1605
RsaNI	GTAC	4 cut(s)	490, 526, 647, 1604
RseI	CAYNNNNRTG	2 cut(s)	121, 368
SacI	GAGCTC	1 cut(s)	32
SalI	GTCGAC	1 cut(s)	137
SapI	GCTCTTC	1 cut(s)	1526
SaqAI	TTAA	9 cut(s)	503, 600, 732, 948, 1050, 1119, 1167, 1341, 1634
SatI	GCNGC	9 cut(s)	69, 106, 114, 312, 498, 606, 609, 1017, 1264
Sau96I	GGNCC	2 cut(s)	248, 1433
SchI	GAGTC	2 cut(s)	318, 1200
ScrFI	CCNGG	8 cut(s)	83, 232, 246, 252, 426, 677, 989, 1600
SduI	GDGCHC	3 cut(s)	32, 130, 730
SfaNI	GCATC	5 cut(s)	530, 615, 1080, 1165, 1187
SfcI	CTRYAG	4 cut(s)	606, 1017, 1399, 1485
SfoI	GGCGCC	1 cut(s)	104
SgrAI	CRCCGGYG	1 cut(s)	184
SgrDI	CGTCGACG	1 cut(s)	137
SinI	GGWCC	2 cut(s)	248, 1433
SmiMI	CAYNNNNRTG	2 cut(s)	121, 368
SmlI	CTYRAG	2 cut(s)	1049, 1472
SmoI	CTYRAG	2 cut(s)	1049, 1472
SphI	GCATGC	2 cut(s)	1270, 1751
Sse9I	AATT	8 cut(s)	389, 439, 717, 787, 1106, 1377, 1389, 1635
SsiI	CCGC	5 cut(s)	69, 106, 182, 357, 1264
SspDI	GGCGCC	1 cut(s)	102
SspI	AATATT	1 cut(s)	754
SspMI	CTAG	5 cut(s)	315, 542, 836, 1277, 1439
SstI	GAGCTC	1 cut(s)	32
StyD4I	CCNGG	8 cut(s)	81, 230, 244, 250, 424, 675, 987, 1598
StyI	CCWWGG	1 cut(s)	1158
TaaI	ACNGT	6 cut(s)	123, 474, 595, 871, 1228, 1627
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	4 cut(s)	87, 130, 138, 975
TaqII	GACCGA	1 cut(s)	1692
TasI	AATT	8 cut(s)	389, 439, 717, 787, 1106, 1377, 1389, 1635
TauI	GCSGC	3 cut(s)	71, 108, 1266
TfiI	GAWTC	4 cut(s)	132, 682, 1030, 1710
Tru1I	TTAA	9 cut(s)	503, 600, 732, 948, 1050, 1119, 1167, 1341, 1634
Tru9I	TTAA	9 cut(s)	503, 600, 732, 948, 1050, 1119, 1167, 1341, 1634
TscAI	CASTG	3 cut(s)	1117, 1326, 1700
TseFI	GTSAC	1 cut(s)	361
TseI	GCWGC	6 cut(s)	113, 311, 497, 605, 608, 1016
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	4 cut(s)	1583, 1685, 1702, 1734
TspGWI	ACGGA	2 cut(s)	807, 828
TspRI	CASTG	3 cut(s)	1117, 1326, 1700
Tth111I	GACNNNGTC	1 cut(s)	971
Van91I	CCANNNNNTGG	1 cut(s)	1159
Vha464I	CTTAAG	1 cut(s)	1049
VpaK11BI	GGWCC	2 cut(s)	248, 1433
VspI	ATTAAT	1 cut(s)	1119
XagI	CCTNNNNNAGG	1 cut(s)	698
XapI	RAATTY	3 cut(s)	389, 717, 1377
XceI	RCATGY	3 cut(s)	1270, 1519, 1751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1109
XmiI	GTMKAC	2 cut(s)	138, 891
XmnI	GAANNNNTTC	3 cut(s)	392, 1034, 1709
XspI	CTAG	5 cut(s)	315, 542, 836, 1277, 1439
ZraI	GACGTC	1 cut(s)	61
Zsp2I	ATGCAT	1 cut(s)	1180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.