Prupe.1G243200_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
25671514 .. 25674630
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G243200.1

Sequence Viewer

Length: 1023 bp
ATGGAGATGAAGCAGACGACATGGCCAGGCCGATCGAATGGCCGTCGTTTCACGTCCTGTCCGTTATGGAGCACTAAGGGTAAAAAGCACCACGAGCTCCACCCGACGAAGCACAGCAATCGAATGTCCGGCAGAGGAGCATCGTCGTCATCTTCAACGGACGGTCGCGATTTCTCGGCCCTGCCGTACGAATTGATAATGATAATCGGGGTTTCGCTGAGCCACCCGAACCTCAGAGCGGCGTCGTTGGCGTGTAAGTCGTGGTACGAGGCACTTCGGCCGCTGAGACAGGCGATGCTGTATATGAGGTGGGGAAAGCGGTTCAAGCACGGCCGAGGTGGGGTCCAGCCCAACATGGACAAGGCTCTCGACGCGTTTCTGAAGGGCGCGGCTCTGGGGTCCCCCATGGCTATGGTGGATGCCGGGCTTATATACTGGGAGAGAGGCCTCAAGGACAAGGCTGTCGCTTTGTATCAGAAAGCTGCAGACCTGGGAGACCTGGCTGGGAAGTGCAATTTGGGAATTTCCTATCTGCAAGTTGAACCTCCAAATCCAAAGGAAGCTGTGAAATGGTTATATCATGCATCCAATGAGGGCCATACCCGTGCCCAGTACCAGCTTGCACTTTGTCTGCATCACGGCCGTGGGGTTGATCGTAACATAAAAGAGGCGGCAAGATGGTATTTGAAAGCTGCAGAAGGTGGTTATGTGCGTGCCATGTACAATGTTTCACTGTGCTACAAATTTGAGGAAGGGTTAGCGCGCAGCCATTGCCAAGCAAGAAAATGGATGAAGAGAGCAGCCGATCGTGGGCACAGTAAAGCTCAATATGAGCATGGACTCGCTCTTTTTTCTGAAGGAGAAAAGATAAAAGCTGTAGTCTACTTGGAACTTGCTACCCGAGGTGGGGAAAGTGCATCAGCTCATGTCAAGGATGTGATTCTTCAACAGCTTTCAGAAACTTCACGTGATGATGTAATGCTTCTTGTCGACCAATGGCGTGCTTTGCCCTCATCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

341

Amino Acids

38.01

Weight (kDa)

9.65

Isoelectric Point (pI)

34.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 461
AccBSI CCGCTC 1 cut(s) 239
AccI GTMKAC 2 cut(s) 882, 990
AccII CGCG 4 cut(s) 168, 374, 389, 763
AciI CCGC 5 cut(s) 239, 281, 319, 389, 671
AcoI YGGCCR 5 cut(s) 23, 40, 278, 331, 640
AcsI RAATTY 2 cut(s) 522, 743
AcuI CTGAAG 2 cut(s) 401, 876
AcvI CACGTG 1 cut(s) 968
AcyI GRCGYC 1 cut(s) 242
AfaI GTAC 4 cut(s) 188, 266, 614, 722
AfiI CCNNNNNNNGG 5 cut(s) 238, 340, 810, 906, 907
AflIII ACRYGT 1 cut(s) 372
AgsI TTSAA 5 cut(s) 156, 325, 542, 688, 947
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 3 cut(s) 25, 489, 498
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
AleI CACNNNNGTG 1 cut(s) 642
AluBI AGCT 9 cut(s) 97, 482, 563, 619, 692, 824, 875, 923, 952
AluI AGCT 9 cut(s) 97, 482, 563, 619, 692, 824, 875, 923, 952
Alw21I GWGCWC 2 cut(s) 74, 99
Alw26I GTCTC 2 cut(s) 280, 489
Ama87I CYCGRG 1 cut(s) 900
AoxI GGCC 9 cut(s) 23, 28, 40, 177, 278, 331, 445, 595, 640
ApeKI GCWGC 4 cut(s) 482, 692, 765, 800
ApoI RAATTY 2 cut(s) 522, 743
AspLEI GCGC 3 cut(s) 389, 763, 765
AspS9I GGNCC 4 cut(s) 178, 343, 399, 595
AsuC2I CCSGG 1 cut(s) 424
AvaI CYCGRG 1 cut(s) 900
AvaII GGWCC 2 cut(s) 343, 399
BaeGI GKGCMC 2 cut(s) 610, 816
BalI TGGCCA 1 cut(s) 25
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 1 cut(s) 92
BbrPI CACGTG 1 cut(s) 968
Bbv12I GWGCWC 2 cut(s) 74, 99
BbvI GCAGC 4 cut(s) 469, 679, 777, 812
BccI CCATC 1 cut(s) 672
BceAI ACGGC 5 cut(s) 27, 169, 346, 627, 655
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 3 cut(s) 27, 491, 500
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 2 cut(s) 280, 489
BfmI CTRYAG 3 cut(s) 483, 693, 876
BisI GCNGC 8 cut(s) 240, 281, 390, 483, 672, 693, 766, 801
BlpI GCTNAGC 1 cut(s) 218
BlsI GCNGC 8 cut(s) 241, 282, 391, 484, 673, 694, 767, 802
Bme1390I CCNGG 4 cut(s) 27, 424, 491, 500
Bme18I GGWCC 2 cut(s) 343, 399
BmeT110I CYCGRG 1 cut(s) 900
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 4 cut(s) 178, 343, 399, 595
BmiI GGNNCC 3 cut(s) 344, 400, 401
BmrFI CCNGG 4 cut(s) 27, 424, 491, 500
BmrI ACTGGG 2 cut(s) 445, 604
BmsI GCATC 6 cut(s) 149, 285, 409, 593, 643, 926
BmuI ACTGGG 2 cut(s) 445, 604
Bpu1102I GCTNAGC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 1 cut(s) 424
BsaAI YACGTR 1 cut(s) 968
BsaHI GRCGYC 1 cut(s) 242
BsaI GGTCTC 1 cut(s) 489
BsaJI CCNNGG 5 cut(s) 334, 405, 490, 643, 901
Bsc4I CCNNNNNNNGG 5 cut(s) 238, 340, 810, 906, 907
Bse1I ACTGG 2 cut(s) 440, 610
Bse3DI GCAATG 1 cut(s) 769
BseBI CCWGG 3 cut(s) 27, 491, 500
BseDI CCNNGG 5 cut(s) 334, 405, 490, 643, 901
BseGI GGATG 4 cut(s) 424, 584, 795, 940
BseLI CCNNNNNNNGG 5 cut(s) 238, 340, 810, 906, 907
BseMI GCAATG 1 cut(s) 769
BseMII CTCAG 3 cut(s) 209, 247, 275
BseNI ACTGG 2 cut(s) 440, 610
BsePI GCGCGC 1 cut(s) 761
BseRI GAGGAG 1 cut(s) 150
BseSI GKGCMC 2 cut(s) 610, 816
BseX3I CGGCCG 3 cut(s) 278, 331, 640
BseXI GCAGC 4 cut(s) 469, 679, 777, 812
BseYI CCCAGC 1 cut(s) 503
Bsh1236I CGCG 4 cut(s) 168, 374, 389, 763
Bsh1285I CGRYCG 6 cut(s) 35, 166, 281, 334, 643, 808
BshFI GGCC 9 cut(s) 25, 30, 42, 179, 280, 333, 447, 597, 642
BsiEI CGRYCG 6 cut(s) 35, 166, 281, 334, 643, 808
BsiHKAI GWGCWC 2 cut(s) 74, 99
BsiHKCI CYCGRG 1 cut(s) 900
BsiSI CCGG 2 cut(s) 129, 423
BsiWI CGTACG 1 cut(s) 186
BslFI GGGAC 1 cut(s) 385
BslI CCNNNNNNNGG 5 cut(s) 238, 340, 810, 906, 907
BsmAI GTCTC 2 cut(s) 280, 489
BsmFI GGGAC 1 cut(s) 385
BsnI GGCC 9 cut(s) 25, 30, 42, 179, 280, 333, 447, 597, 642
Bso31I GGTCTC 1 cut(s) 489
BsoBI CYCGRG 1 cut(s) 900
Bsp1286I GDGCHC 4 cut(s) 74, 99, 610, 816
Bsp1407I TGTACA 1 cut(s) 720
Bsp143I GATC 3 cut(s) 32, 652, 805
Bsp1720I GCTNAGC 1 cut(s) 218
Bsp19I CCATGG 1 cut(s) 405
Bsp68I TCGCGA 1 cut(s) 168
BspACI CCGC 5 cut(s) 239, 281, 319, 389, 671
BspANI GGCC 9 cut(s) 25, 30, 42, 179, 280, 333, 447, 597, 642
BspCNI CTCAG 3 cut(s) 210, 246, 276
BspFNI CGCG 4 cut(s) 168, 374, 389, 763
BspLI GGNNCC 3 cut(s) 344, 400, 401
BspMAI CTGCAG 2 cut(s) 487, 697
BspTNI GGTCTC 1 cut(s) 489
BsrBI CCGCTC 1 cut(s) 239
BsrDI GCAATG 1 cut(s) 769
BsrGI TGTACA 1 cut(s) 720
BsrI ACTGG 2 cut(s) 440, 610
BssECI CCNNGG 5 cut(s) 334, 405, 490, 643, 901
BssHII GCGCGC 1 cut(s) 761
BssMI GATC 3 cut(s) 32, 652, 805
BssNI GRCGYC 1 cut(s) 242
BssSI CACGAG 1 cut(s) 92
BssT1I CCWWGG 1 cut(s) 405
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 3 cut(s) 27, 491, 500
Bst4CI ACNGT 3 cut(s) 164, 735, 818
Bst6I CTCTTC 1 cut(s) 788
BstACI GRCGYC 1 cut(s) 242
BstAPI GCANNNNNTGC 1 cut(s) 771
BstAUI TGTACA 1 cut(s) 720
BstBAI YACGTR 1 cut(s) 968
BstC8I GCNNGC 4 cut(s) 621, 714, 763, 1002
BstDEI CTNAG 4 cut(s) 75, 218, 233, 284
BstDSI CCRYGG 2 cut(s) 405, 643
BstF5I GGATG 4 cut(s) 424, 584, 795, 940
BstFNI CGCG 4 cut(s) 168, 374, 389, 763
BstHHI GCGC 3 cut(s) 389, 763, 765
BstKTI GATC 3 cut(s) 35, 655, 808
BstMAI GTCTC 2 cut(s) 280, 489
BstMBI GATC 3 cut(s) 32, 652, 805
BstMCI CGRYCG 6 cut(s) 35, 166, 281, 334, 643, 808
BstMWI GCNNNNNNNGC 6 cut(s) 94, 248, 325, 371, 771, 1006
BstNI CCWGG 3 cut(s) 27, 491, 500
BstSCI CCNGG 4 cut(s) 25, 422, 489, 498
BstSFI CTRYAG 3 cut(s) 483, 693, 876
BstSLI GKGCMC 2 cut(s) 610, 816
BstUI CGCG 4 cut(s) 168, 374, 389, 763
BstV1I GCAGC 4 cut(s) 469, 679, 777, 812
BstXI CCANNNNNNTGG 1 cut(s) 412
BstZI CGGCCG 3 cut(s) 278, 331, 640
BsuRI GGCC 9 cut(s) 25, 30, 42, 179, 280, 333, 447, 597, 642
BtgI CCRYGG 2 cut(s) 405, 643
BtgZI GCGATG 1 cut(s) 308
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 4 cut(s) 424, 584, 795, 940
BtsIMutI CAGTG 1 cut(s) 731
BtuMI TCGCGA 1 cut(s) 168
Cac8I GCNNGC 4 cut(s) 621, 714, 763, 1002
CfoI GCGC 3 cut(s) 389, 763, 765
Cfr13I GGNCC 4 cut(s) 178, 343, 399, 595
CseI GACGC 2 cut(s) 231, 380
Csp6I GTAC 4 cut(s) 187, 265, 613, 721
CviAII CATG 7 cut(s) 21, 355, 406, 581, 718, 836, 926
CviQI GTAC 4 cut(s) 187, 265, 613, 721
DdeI CTNAG 4 cut(s) 75, 218, 233, 284
DpnI GATC 3 cut(s) 34, 654, 807
DpnII GATC 3 cut(s) 32, 652, 805
DrdI GACNNNNNNGTC 1 cut(s) 461
DseDI GACNNNNNNGTC 1 cut(s) 461
EaeI YGGCCR 5 cut(s) 23, 40, 278, 331, 640
EagI CGGCCG 3 cut(s) 278, 331, 640
Eam1104I CTCTTC 1 cut(s) 788
EarI CTCTTC 1 cut(s) 788
Ecl136II GAGCTC 1 cut(s) 97
EclXI CGGCCG 3 cut(s) 278, 331, 640
Eco130I CCWWGG 1 cut(s) 405
Eco147I AGGCCT 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 489
Eco47I GGWCC 2 cut(s) 343, 399
Eco52I CGGCCG 3 cut(s) 278, 331, 640
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 2 cut(s) 401, 876
Eco72I CACGTG 1 cut(s) 968
Eco88I CYCGRG 1 cut(s) 900
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 399
EcoRII CCWGG 3 cut(s) 25, 489, 498
EcoT14I CCWWGG 1 cut(s) 405
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 405
FaeI CATG 7 cut(s) 24, 358, 409, 584, 721, 839, 929
FaqI GGGAC 1 cut(s) 385
FatI CATG 7 cut(s) 20, 354, 405, 580, 717, 835, 925
FblI GTMKAC 2 cut(s) 882, 990
Fnu4HI GCNGC 8 cut(s) 240, 281, 390, 483, 672, 693, 766, 801
FokI GGATG 4 cut(s) 431, 571, 802, 947
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 8 cut(s) 240, 281, 390, 483, 672, 693, 766, 801
GlaI GCGC 3 cut(s) 388, 762, 764
GluI GCNGC 8 cut(s) 240, 281, 390, 483, 672, 693, 766, 801
GsaI CCCAGC 1 cut(s) 507
HaeIII GGCC 9 cut(s) 25, 30, 42, 179, 280, 333, 447, 597, 642
HapII CCGG 2 cut(s) 129, 423
HgaI GACGC 2 cut(s) 231, 380
HhaI GCGC 3 cut(s) 389, 763, 765
Hin1I GRCGYC 1 cut(s) 242
Hin1II CATG 7 cut(s) 24, 358, 409, 584, 721, 839, 929
Hin6I GCGC 3 cut(s) 387, 761, 763
HinP1I GCGC 3 cut(s) 387, 761, 763
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HinfI GANTC 2 cut(s) 840, 940
HpaII CCGG 2 cut(s) 129, 423
Hpy166II GTNNAC 2 cut(s) 883, 991
Hpy188I TCNGA 5 cut(s) 236, 381, 477, 856, 958
Hpy188III TCNNGA 3 cut(s) 167, 368, 1020
Hpy8I GTNNAC 2 cut(s) 883, 991
Hpy99I CGWCG 5 cut(s) 48, 109, 148, 247, 374
HpyAV CCTTC 4 cut(s) 376, 692, 746, 851
HpyCH4III ACNGT 3 cut(s) 164, 735, 818
HpyCH4IV ACGT 2 cut(s) 53, 967
HpyCH4V TGCA 8 cut(s) 485, 513, 535, 584, 623, 634, 695, 917
HpyF10VI GCNNNNNNNGC 6 cut(s) 94, 248, 325, 371, 771, 1006
HpyF3I CTNAG 4 cut(s) 75, 218, 233, 284
HpySE526I ACGT 2 cut(s) 53, 967
Hsp92I GRCGYC 1 cut(s) 242
Hsp92II CATG 7 cut(s) 24, 358, 409, 584, 721, 839, 929
HspAI GCGC 3 cut(s) 387, 761, 763
KflI GGGWCCC 1 cut(s) 399
Kzo9I GATC 3 cut(s) 32, 652, 805
LmnI GCTCC 3 cut(s) 69, 102, 137
Lsp1109I GCAGC 4 cut(s) 469, 679, 777, 812
LweI GCATC 6 cut(s) 149, 285, 409, 593, 643, 926
MaeII ACGT 2 cut(s) 53, 967
MaeIII GTNAC 1 cut(s) 656
MalI GATC 3 cut(s) 34, 654, 807
MbiI CCGCTC 1 cut(s) 239
MboI GATC 3 cut(s) 32, 652, 805
MboII GAAGA 4 cut(s) 144, 805, 935, 1008
MhlI GDGCHC 4 cut(s) 74, 99, 610, 816
MlsI TGGCCA 1 cut(s) 25
MluCI AATT 4 cut(s) 191, 514, 522, 743
MluI ACGCGT 1 cut(s) 372
MluNI TGGCCA 1 cut(s) 25
MlyI GAGTC 1 cut(s) 834
Mox20I TGGCCA 1 cut(s) 25
Mph1103I ATGCAT 1 cut(s) 586
MscI TGGCCA 1 cut(s) 25
MslI CAYNNNNRTG 3 cut(s) 410, 603, 642
Msp20I TGGCCA 1 cut(s) 25
MspA1I CMGCKG 1 cut(s) 283
MspI CCGG 2 cut(s) 129, 423
MspR9I CCNGG 4 cut(s) 27, 424, 491, 500
MvaI CCWGG 3 cut(s) 27, 491, 500
MvnI CGCG 4 cut(s) 168, 374, 389, 763
MwoI GCNNNNNNNGC 6 cut(s) 94, 248, 325, 371, 771, 1006
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 1 cut(s) 405
NdeII GATC 3 cut(s) 32, 652, 805
NlaIII CATG 7 cut(s) 24, 358, 409, 584, 721, 839, 929
NlaIV GGNNCC 3 cut(s) 344, 400, 401
NmeAIII GCCGAG 2 cut(s) 155, 359
NruI TCGCGA 1 cut(s) 168
NsiI ATGCAT 1 cut(s) 586
OliI CACNNNNGTG 1 cut(s) 642
PauI GCGCGC 1 cut(s) 761
PceI AGGCCT 1 cut(s) 447
PcsI WCGNNNNNNNCGW 2 cut(s) 59, 182
PfeI GAWTC 1 cut(s) 940
Pfl23II CGTACG 1 cut(s) 186
PkrI GCNGC 8 cut(s) 241, 282, 391, 484, 673, 694, 767, 802
Ple19I CGATCG 2 cut(s) 35, 808
PleI GAGTC 1 cut(s) 834
PmaCI CACGTG 1 cut(s) 968
PmlI CACGTG 1 cut(s) 968
PpsI GAGTC 1 cut(s) 834
Ppu21I YACGTR 1 cut(s) 968
PpuMI RGGWCCY 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 1 cut(s) 399
Psp6I CCWGG 3 cut(s) 25, 489, 498
PspCI CACGTG 1 cut(s) 968
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 3 cut(s) 25, 489, 498
PspLI CGTACG 1 cut(s) 186
PspN4I GGNNCC 3 cut(s) 344, 400, 401
PspPI GGNCC 4 cut(s) 178, 343, 399, 595
PspPPI RGGWCCY 1 cut(s) 399
PstI CTGCAG 2 cut(s) 487, 697
PteI GCGCGC 1 cut(s) 761
PvuI CGATCG 2 cut(s) 35, 808
RruI TCGCGA 1 cut(s) 168
RsaI GTAC 4 cut(s) 188, 266, 614, 722
RsaNI GTAC 4 cut(s) 187, 265, 613, 721
RseI CAYNNNNRTG 3 cut(s) 410, 603, 642
SacI GAGCTC 1 cut(s) 99
SalI GTCGAC 1 cut(s) 989
SatI GCNGC 8 cut(s) 240, 281, 390, 483, 672, 693, 766, 801
Sau3AI GATC 3 cut(s) 32, 652, 805
Sau96I GGNCC 4 cut(s) 178, 343, 399, 595
SchI GAGTC 1 cut(s) 834
ScrFI CCNGG 4 cut(s) 27, 424, 491, 500
SduI GDGCHC 4 cut(s) 74, 99, 610, 816
SfaNI GCATC 6 cut(s) 149, 285, 409, 593, 643, 926
SfcI CTRYAG 3 cut(s) 483, 693, 876
SinI GGWCC 2 cut(s) 343, 399
SmiMI CAYNNNNRTG 3 cut(s) 410, 603, 642
SmlI CTYRAG 1 cut(s) 449
SmoI CTYRAG 1 cut(s) 449
Sse9I AATT 4 cut(s) 191, 514, 522, 743
SseBI AGGCCT 1 cut(s) 447
SsiI CCGC 5 cut(s) 239, 281, 319, 389, 671
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 447
StyD4I CCNGG 4 cut(s) 25, 422, 489, 498
StyI CCWWGG 1 cut(s) 405
TaaI ACNGT 3 cut(s) 164, 735, 818
TaiI ACGT 2 cut(s) 56, 970
TaqI TCGA 4 cut(s) 35, 121, 369, 990
TasI AATT 4 cut(s) 191, 514, 522, 743
TatI WGTACW 1 cut(s) 720
TauI GCSGC 4 cut(s) 242, 283, 392, 674
TfiI GAWTC 1 cut(s) 940
TscAI CASTG 1 cut(s) 738
TseI GCWGC 4 cut(s) 482, 692, 765, 800
TspDTI ATGAA 2 cut(s) 23, 806
TspGWI ACGGA 2 cut(s) 51, 173
TspRI CASTG 1 cut(s) 738
VpaK11BI GGWCC 2 cut(s) 343, 399
XapI RAATTY 2 cut(s) 522, 743
XcmI CCANNNNNNNNNTGG 1 cut(s) 412
XmiI GTMKAC 2 cut(s) 882, 990
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.