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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03330 AT3G11810 |
| fragaria_vesca | FvH4_4g30670 |
| malus_domestica | MD12G1099700.v1.1 MD16G1066700.v1.1 |
| prunus_persica | Prupe.1G280200_v2.0.a1 |
| pyrus_communis | pycom07g14060 pycom11g23620 pycom12g09400 pycom13g05970 |
| rosa_chinensis | RchiOBHm_Chr4g0439081 RchiOBHm_Chr4g0439091 RchiOBHm_Chr5g0060931 |
| rosa_laevigata | RLG00000006301 RLG00000006302 RLG00000035415 |
| rosa_multiflora | Rmu_co8048828.1_g000001 Rmu_co8116372.1_g000001 Rmu_sc0000152.1_g000002 Rmu_sc0012017.1_g000006 Rmu_sc0012017.1_g000007 Rmu_sc0015139.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00380070 Rroxscaffold_5G00380080 |
| rosa_rugosa | Rorug04G0315400 Rorug04G0315500 |
| rosa_samantha | Rh3CG347900 Rh4AG366200 Rh4AG366300 Rh4BG377600 Rh4BG377700 Rh4CG391700 Rh4CG391800 Rh4DG372300 Rh4DG372400 |
| rosa_wichuraiana | Rw0G007450 Rw0G007460 Rw0G017000 Rw0G017010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 16 |
| AccI | GTMKAC | 1 cut(s) | 135 |
| AciI | CCGC | 2 cut(s) | 76, 366 |
| AclWI | GGATC | 3 cut(s) | 421, 639, 652 |
| AcoI | YGGCCR | 1 cut(s) | 343 |
| AcsI | RAATTY | 1 cut(s) | 198 |
| AcuI | CTGAAG | 1 cut(s) | 304 |
| AfaI | GTAC | 2 cut(s) | 409, 515 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 403, 404 |
| AgsI | TTSAA | 2 cut(s) | 211, 587 |
| AluBI | AGCT | 6 cut(s) | 8, 493, 545, 605, 910, 954 |
| AluI | AGCT | 6 cut(s) | 8, 493, 545, 605, 910, 954 |
| Alw21I | GWGCWC | 3 cut(s) | 35, 42, 912 |
| Alw44I | GTGCAC | 1 cut(s) | 31 |
| AlwI | GGATC | 3 cut(s) | 421, 639, 652 |
| AoxI | GGCC | 1 cut(s) | 343 |
| ApaLI | GTGCAC | 1 cut(s) | 31 |
| ApeKI | GCWGC | 3 cut(s) | 5, 841, 863 |
| ApoI | RAATTY | 1 cut(s) | 198 |
| AspLEI | GCGC | 1 cut(s) | 57 |
| AspS9I | GGNCC | 1 cut(s) | 597 |
| AsuHPI | GGTGA | 2 cut(s) | 307, 832 |
| AvaII | GGWCC | 1 cut(s) | 597 |
| BaeGI | GKGCMC | 1 cut(s) | 35 |
| BamHI | GGATCC | 1 cut(s) | 644 |
| BanI | GGYRCC | 1 cut(s) | 16 |
| BanII | GRGCYC | 3 cut(s) | 311, 898, 912 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 736, 768 |
| Bbv12I | GWGCWC | 3 cut(s) | 35, 42, 912 |
| BbvI | GCAGC | 3 cut(s) | 17, 828, 875 |
| BceAI | ACGGC | 3 cut(s) | 287, 876, 919 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 28 |
| BclI | TGATCA | 1 cut(s) | 669 |
| BfaI | CTAG | 2 cut(s) | 461, 602 |
| BfmI | CTRYAG | 1 cut(s) | 742 |
| BisI | GCNGC | 3 cut(s) | 6, 842, 864 |
| BlpI | GCTNAGC | 1 cut(s) | 489 |
| BlsI | GCNGC | 3 cut(s) | 7, 843, 865 |
| Bme18I | GGWCC | 1 cut(s) | 597 |
| BmgT120I | GGNCC | 1 cut(s) | 597 |
| BmiI | GGNNCC | 3 cut(s) | 18, 599, 646 |
| BmsI | GCATC | 1 cut(s) | 693 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 489 |
| BsaJI | CCNNGG | 2 cut(s) | 303, 915 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 56, 86 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 403, 404 |
| BseDI | CCNNGG | 2 cut(s) | 303, 915 |
| BseGI | GGATG | 2 cut(s) | 167, 775 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 403, 404 |
| BseMII | CTCAG | 2 cut(s) | 108, 480 |
| BseRI | GAGGAG | 2 cut(s) | 115, 944 |
| BseSI | GKGCMC | 1 cut(s) | 35 |
| BseXI | GCAGC | 3 cut(s) | 17, 828, 875 |
| BshFI | GGCC | 1 cut(s) | 345 |
| BshNI | GGYRCC | 1 cut(s) | 16 |
| BsiHKAI | GWGCWC | 3 cut(s) | 35, 42, 912 |
| BslFI | GGGAC | 1 cut(s) | 962 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 403, 404 |
| BsmFI | GGGAC | 1 cut(s) | 962 |
| BsnI | GGCC | 1 cut(s) | 345 |
| Bsp1286I | GDGCHC | 5 cut(s) | 35, 42, 311, 898, 912 |
| Bsp143I | GATC | 4 cut(s) | 312, 426, 644, 669 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 489 |
| Bsp19I | CCATGG | 1 cut(s) | 915 |
| BspACI | CCGC | 2 cut(s) | 76, 366 |
| BspANI | GGCC | 1 cut(s) | 345 |
| BspCNI | CTCAG | 2 cut(s) | 107, 481 |
| BspLI | GGNNCC | 3 cut(s) | 18, 599, 646 |
| BspPI | GGATC | 3 cut(s) | 421, 639, 652 |
| BspT107I | GGYRCC | 1 cut(s) | 16 |
| BssECI | CCNNGG | 2 cut(s) | 303, 915 |
| BssMI | GATC | 4 cut(s) | 312, 426, 644, 669 |
| BssT1I | CCWWGG | 1 cut(s) | 915 |
| Bst4CI | ACNGT | 5 cut(s) | 37, 145, 412, 451, 874 |
| Bst6I | CTCTTC | 3 cut(s) | 107, 281, 785 |
| BstC8I | GCNNGC | 3 cut(s) | 908, 912, 956 |
| BstDEI | CTNAG | 3 cut(s) | 85, 94, 489 |
| BstDSI | CCRYGG | 2 cut(s) | 303, 915 |
| BstF5I | GGATG | 2 cut(s) | 167, 775 |
| BstHHI | GCGC | 1 cut(s) | 57 |
| BstKTI | GATC | 4 cut(s) | 315, 429, 647, 672 |
| BstMBI | GATC | 4 cut(s) | 312, 426, 644, 669 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 551, 847 |
| BstSFI | CTRYAG | 1 cut(s) | 742 |
| BstSLI | GKGCMC | 1 cut(s) | 35 |
| BstV1I | GCAGC | 3 cut(s) | 17, 828, 875 |
| BstX2I | RGATCY | 2 cut(s) | 426, 644 |
| BstYI | RGATCY | 2 cut(s) | 426, 644 |
| BsuRI | GGCC | 1 cut(s) | 345 |
| BtgI | CCRYGG | 2 cut(s) | 303, 915 |
| BtgZI | GCGATG | 2 cut(s) | 220, 569 |
| BtsCI | GGATG | 2 cut(s) | 167, 775 |
| BtsIMutI | CAGTG | 2 cut(s) | 42, 447 |
| Cac8I | GCNNGC | 3 cut(s) | 908, 912, 956 |
| CfoI | GCGC | 1 cut(s) | 57 |
| Cfr13I | GGNCC | 1 cut(s) | 597 |
| Csp6I | GTAC | 2 cut(s) | 408, 514 |
| CviAII | CATG | 1 cut(s) | 916 |
| CviQI | GTAC | 2 cut(s) | 408, 514 |
| DdeI | CTNAG | 3 cut(s) | 85, 94, 489 |
| DpnI | GATC | 4 cut(s) | 314, 428, 646, 671 |
| DpnII | GATC | 4 cut(s) | 312, 426, 644, 669 |
| EaeI | YGGCCR | 1 cut(s) | 343 |
| Eam1104I | CTCTTC | 3 cut(s) | 107, 281, 785 |
| EarI | CTCTTC | 3 cut(s) | 107, 281, 785 |
| Ecl136II | GAGCTC | 1 cut(s) | 910 |
| Eco130I | CCWWGG | 1 cut(s) | 915 |
| Eco24I | GRGCYC | 3 cut(s) | 311, 898, 912 |
| Eco47I | GGWCC | 1 cut(s) | 597 |
| Eco53kI | GAGCTC | 1 cut(s) | 910 |
| Eco57I | CTGAAG | 1 cut(s) | 304 |
| EcoICRI | GAGCTC | 1 cut(s) | 910 |
| EcoT14I | CCWWGG | 1 cut(s) | 915 |
| EcoT38I | GRGCYC | 3 cut(s) | 311, 898, 912 |
| ErhI | CCWWGG | 1 cut(s) | 915 |
| FaeI | CATG | 1 cut(s) | 919 |
| FaiI | YATR | 8 cut(s) | 59, 342, 839, 882, 884, 917, 948, 1002 |
| FaqI | GGGAC | 1 cut(s) | 962 |
| FatI | CATG | 1 cut(s) | 915 |
| FauI | CCCGC | 1 cut(s) | 83 |
| FbaI | TGATCA | 1 cut(s) | 669 |
| FblI | GTMKAC | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 842, 864 |
| FokI | GGATG | 2 cut(s) | 154, 782 |
| FriOI | GRGCYC | 3 cut(s) | 311, 898, 912 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 842, 864 |
| FspBI | CTAG | 2 cut(s) | 461, 602 |
| GlaI | GCGC | 1 cut(s) | 56 |
| GluI | GCNGC | 3 cut(s) | 6, 842, 864 |
| HaeIII | GGCC | 1 cut(s) | 345 |
| HhaI | GCGC | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 919 |
| Hin6I | GCGC | 1 cut(s) | 55 |
| HinP1I | GCGC | 1 cut(s) | 55 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HinfI | GANTC | 4 cut(s) | 47, 336, 626, 664 |
| HphI | GGTGA | 2 cut(s) | 307, 832 |
| Hpy166II | GTNNAC | 3 cut(s) | 33, 64, 136 |
| Hpy188I | TCNGA | 3 cut(s) | 507, 644, 669 |
| Hpy8I | GTNNAC | 3 cut(s) | 33, 64, 136 |
| Hpy99I | CGWCG | 2 cut(s) | 943, 968 |
| HpyAV | CCTTC | 4 cut(s) | 116, 328, 400, 970 |
| HpyCH4III | ACNGT | 5 cut(s) | 37, 145, 412, 451, 874 |
| HpyCH4V | TGCA | 4 cut(s) | 33, 811, 891, 926 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 551, 847 |
| HpyF3I | CTNAG | 3 cut(s) | 85, 94, 489 |
| Hsp92II | CATG | 1 cut(s) | 919 |
| HspAI | GCGC | 1 cut(s) | 55 |
| Ksp22I | TGATCA | 1 cut(s) | 669 |
| Kzo9I | GATC | 4 cut(s) | 312, 426, 644, 669 |
| LmnI | GCTCC | 1 cut(s) | 13 |
| LpnPI | CCDG | 4 cut(s) | 41, 437, 554, 877 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 828, 875 |
| LweI | GCATC | 1 cut(s) | 693 |
| MaeI | CTAG | 2 cut(s) | 461, 602 |
| MaeIII | GTNAC | 1 cut(s) | 820 |
| MalI | GATC | 4 cut(s) | 314, 428, 646, 671 |
| MboI | GATC | 4 cut(s) | 312, 426, 644, 669 |
| MboII | GAAGA | 7 cut(s) | 94, 262, 268, 274, 385, 575, 802 |
| MflI | RGATCY | 2 cut(s) | 426, 644 |
| MhlI | GDGCHC | 5 cut(s) | 35, 42, 311, 898, 912 |
| MluCI | AATT | 6 cut(s) | 198, 517, 592, 631, 813, 921 |
| MmeI | TCCRAC | 1 cut(s) | 767 |
| MseI | TTAA | 3 cut(s) | 159, 650, 900 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 551, 847 |
| NcoI | CCATGG | 1 cut(s) | 915 |
| NdeII | GATC | 4 cut(s) | 312, 426, 644, 669 |
| NlaIII | CATG | 1 cut(s) | 919 |
| NlaIV | GGNNCC | 3 cut(s) | 18, 599, 646 |
| NmuCI | GTSAC | 1 cut(s) | 820 |
| PfeI | GAWTC | 4 cut(s) | 47, 336, 626, 664 |
| PkrI | GCNGC | 3 cut(s) | 7, 843, 865 |
| Psp124BI | GAGCTC | 1 cut(s) | 912 |
| PspN4I | GGNNCC | 3 cut(s) | 18, 599, 646 |
| PspPI | GGNCC | 1 cut(s) | 597 |
| PsuI | RGATCY | 2 cut(s) | 426, 644 |
| RsaI | GTAC | 2 cut(s) | 409, 515 |
| RsaNI | GTAC | 2 cut(s) | 408, 514 |
| SacI | GAGCTC | 1 cut(s) | 912 |
| SaqAI | TTAA | 3 cut(s) | 159, 650, 900 |
| SatI | GCNGC | 3 cut(s) | 6, 842, 864 |
| Sau3AI | GATC | 4 cut(s) | 312, 426, 644, 669 |
| Sau96I | GGNCC | 1 cut(s) | 597 |
| SduI | GDGCHC | 5 cut(s) | 35, 42, 311, 898, 912 |
| SfaNI | GCATC | 1 cut(s) | 693 |
| SfcI | CTRYAG | 1 cut(s) | 742 |
| SinI | GGWCC | 1 cut(s) | 597 |
| Sse9I | AATT | 6 cut(s) | 198, 517, 592, 631, 813, 921 |
| SsiI | CCGC | 2 cut(s) | 76, 366 |
| SspMI | CTAG | 2 cut(s) | 461, 602 |
| SstI | GAGCTC | 1 cut(s) | 912 |
| StyI | CCWWGG | 1 cut(s) | 915 |
| TaaI | ACNGT | 5 cut(s) | 37, 145, 412, 451, 874 |
| TaqI | TCGA | 6 cut(s) | 50, 311, 481, 655, 728, 963 |
| TasI | AATT | 6 cut(s) | 198, 517, 592, 631, 813, 921 |
| TatI | WGTACW | 1 cut(s) | 513 |
| TfiI | GAWTC | 4 cut(s) | 47, 336, 626, 664 |
| Tru1I | TTAA | 3 cut(s) | 159, 650, 900 |
| Tru9I | TTAA | 3 cut(s) | 159, 650, 900 |
| TscAI | CASTG | 2 cut(s) | 42, 454 |
| TseFI | GTSAC | 1 cut(s) | 820 |
| TseI | GCWGC | 3 cut(s) | 5, 841, 863 |
| Tsp45I | GTSAC | 1 cut(s) | 820 |
| TspDTI | ATGAA | 1 cut(s) | 268 |
| TspGWI | ACGGA | 3 cut(s) | 348, 367, 956 |
| TspRI | CASTG | 2 cut(s) | 42, 454 |
| VneI | GTGCAC | 1 cut(s) | 31 |
| VpaK11BI | GGWCC | 1 cut(s) | 597 |
| XapI | RAATTY | 1 cut(s) | 198 |
| XmiI | GTMKAC | 1 cut(s) | 135 |
| XspI | CTAG | 2 cut(s) | 461, 602 |