pycom07g14060

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
15883278 .. 15883478
201 bp
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UTR
Exon/CDS
Intron
pycom07g14060.1

Sequence Viewer

Length: 201 bp
ATGCAAATTGTGGTGACTGCGACTTCTCTCGTGTTGCTGATGCTCTACAATGCCGCTGCGAATACGGTGTTGTATATGTATTTCCGGGCTGTGAATGGTGAGCTTGCCATGGAAATTGCAGAGGAGTTTGCTAGGGAGTATGTGAGCTTGCCCTTCGACAACGAAAAAGTCCCTCATGTTGTTTCGGTTGCACATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.36

Weight (kDa)

4.78

Isoelectric Point (pI)

27.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 54
AluBI AGCT 2 cut(s) 103, 147
AluI AGCT 2 cut(s) 103, 147
ApeKI GCWGC 1 cut(s) 56
AsuC2I CCSGG 1 cut(s) 86
AsuHPI GGTGA 2 cut(s) 25, 110
BauI CACGAG 1 cut(s) 29
BbvI GCAGC 1 cut(s) 43
BcnI CCSGG 1 cut(s) 86
BfaI CTAG 1 cut(s) 132
BisI GCNGC 2 cut(s) 54, 57
BlsI GCNGC 2 cut(s) 55, 58
Bme1390I CCNGG 1 cut(s) 86
BmrFI CCNGG 1 cut(s) 86
BmsI GCATC 1 cut(s) 30
BpuMI CCSGG 1 cut(s) 86
BsaJI CCNNGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 108
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 43
BsiSI CCGG 1 cut(s) 85
BslFI GGGAC 1 cut(s) 155
BsmFI GGGAC 1 cut(s) 155
Bsp19I CCATGG 1 cut(s) 108
BspACI CCGC 1 cut(s) 54
BssECI CCNNGG 1 cut(s) 108
BssSI CACGAG 1 cut(s) 29
BssT1I CCWWGG 1 cut(s) 108
Bst2BI CACGAG 1 cut(s) 29
Bst4CI ACNGT 1 cut(s) 67
BstC8I GCNNGC 2 cut(s) 105, 149
BstDSI CCRYGG 1 cut(s) 108
BstNSI RCATGY 1 cut(s) 197
BstSCI CCNGG 1 cut(s) 84
BstV1I GCAGC 1 cut(s) 43
BtgI CCRYGG 1 cut(s) 108
Cac8I GCNNGC 2 cut(s) 105, 149
CviAII CATG 3 cut(s) 109, 176, 194
CviJI RGCY 3 cut(s) 89, 103, 147
CviKI_1 RGCY 3 cut(s) 89, 103, 147
Eco130I CCWWGG 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 3 cut(s) 112, 179, 197
FaiI YATR 6 cut(s) 75, 77, 110, 141, 177, 195
FaqI GGGAC 1 cut(s) 155
FatI CATG 3 cut(s) 108, 175, 193
Fnu4HI GCNGC 2 cut(s) 54, 57
Fsp4HI GCNGC 2 cut(s) 54, 57
FspBI CTAG 1 cut(s) 132
GluI GCNGC 2 cut(s) 54, 57
HapII CCGG 1 cut(s) 85
Hin1II CATG 3 cut(s) 112, 179, 197
HpaII CCGG 1 cut(s) 85
HphI GGTGA 2 cut(s) 25, 110
HpyAV CCTTC 1 cut(s) 163
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4V TGCA 3 cut(s) 4, 119, 191
Hsp92II CATG 3 cut(s) 112, 179, 197
LpnPI CCDG 1 cut(s) 98
Lsp1109I GCAGC 1 cut(s) 43
LweI GCATC 1 cut(s) 30
MaeI CTAG 1 cut(s) 132
MaeIII GTNAC 1 cut(s) 13
MluCI AATT 2 cut(s) 6, 114
MnlI CCTC 2 cut(s) 115, 183
MspA1I CMGCKG 1 cut(s) 56
MspI CCGG 1 cut(s) 85
MspR9I CCNGG 1 cut(s) 86
NciI CCSGG 1 cut(s) 86
NcoI CCATGG 1 cut(s) 108
NlaIII CATG 3 cut(s) 112, 179, 197
NmuCI GTSAC 1 cut(s) 13
NspI RCATGY 1 cut(s) 197
PkrI GCNGC 2 cut(s) 55, 58
SatI GCNGC 2 cut(s) 54, 57
ScrFI CCNGG 1 cut(s) 86
SetI ASST 2 cut(s) 105, 149
SfaNI GCATC 1 cut(s) 30
SgeI CNNG 9 cut(s) 41, 43, 97, 98, 116, 121, 144, 160, 188
Sse9I AATT 2 cut(s) 6, 114
SsiI CCGC 1 cut(s) 54
SspMI CTAG 1 cut(s) 132
StyD4I CCNGG 1 cut(s) 84
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 1 cut(s) 67
TaqI TCGA 1 cut(s) 156
TasI AATT 2 cut(s) 6, 114
TauI GCSGC 1 cut(s) 56
TseFI GTSAC 1 cut(s) 13
TseI GCWGC 1 cut(s) 56
Tsp45I GTSAC 1 cut(s) 13
XceI RCATGY 1 cut(s) 197
XspI CTAG 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.