No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03330 AT3G11810 |
| fragaria_vesca | FvH4_4g30670 |
| malus_domestica | MD12G1099700.v1.1 MD16G1066700.v1.1 |
| prunus_persica | Prupe.1G280200_v2.0.a1 |
| pyrus_communis | pycom07g14060 pycom11g23620 pycom12g09400 pycom13g05970 |
| rosa_chinensis | RchiOBHm_Chr4g0439081 RchiOBHm_Chr4g0439091 RchiOBHm_Chr5g0060931 |
| rosa_laevigata | RLG00000006301 RLG00000006302 RLG00000035415 |
| rosa_multiflora | Rmu_co8048828.1_g000001 Rmu_co8116372.1_g000001 Rmu_sc0000152.1_g000002 Rmu_sc0012017.1_g000006 Rmu_sc0012017.1_g000007 Rmu_sc0015139.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00380070 Rroxscaffold_5G00380080 |
| rosa_rugosa | Rorug04G0315400 Rorug04G0315500 |
| rosa_samantha | Rh3CG347900 Rh4AG366200 Rh4AG366300 Rh4BG377600 Rh4BG377700 Rh4CG391700 Rh4CG391800 Rh4DG372300 Rh4DG372400 |
| rosa_wichuraiana | Rw0G007450 Rw0G007460 Rw0G017000 Rw0G017010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 403 |
| AciI | CCGC | 2 cut(s) | 127, 401 |
| AcoI | YGGCCR | 2 cut(s) | 124, 375 |
| AfaI | GTAC | 2 cut(s) | 190, 296 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 185, 289 |
| AgsI | TTSAA | 3 cut(s) | 25, 52, 359 |
| AluBI | AGCT | 2 cut(s) | 90, 117 |
| AluI | AGCT | 2 cut(s) | 90, 117 |
| AoxI | GGCC | 3 cut(s) | 124, 280, 375 |
| AsuHPI | GGTGA | 1 cut(s) | 88 |
| BfmI | CTRYAG | 1 cut(s) | 100 |
| BisI | GCNGC | 1 cut(s) | 127 |
| BlsI | GCNGC | 1 cut(s) | 128 |
| BmcAI | AGTACT | 1 cut(s) | 296 |
| BmsI | GCATC | 1 cut(s) | 114 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 185, 289 |
| Bse118I | RCCGGY | 1 cut(s) | 377 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| Bse3DI | GCAATG | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 246 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 185, 289 |
| BseMI | GCAATG | 1 cut(s) | 141 |
| BseMII | CTCAG | 1 cut(s) | 100 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseYI | CCCAGC | 1 cut(s) | 236 |
| Bsh1236I | CGCG | 1 cut(s) | 403 |
| BshFI | GGCC | 3 cut(s) | 126, 282, 377 |
| BsiSI | CCGG | 1 cut(s) | 378 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 185, 289 |
| BsnI | GGCC | 3 cut(s) | 126, 282, 377 |
| BspACI | CCGC | 2 cut(s) | 127, 401 |
| BspANI | GGCC | 3 cut(s) | 126, 282, 377 |
| BspCNI | CTCAG | 1 cut(s) | 99 |
| BspFNI | CGCG | 1 cut(s) | 403 |
| BsrDI | GCAATG | 1 cut(s) | 141 |
| BsrFI | RCCGGY | 1 cut(s) | 377 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssAI | RCCGGY | 1 cut(s) | 377 |
| Bst6I | CTCTTC | 1 cut(s) | 304 |
| BstDEI | CTNAG | 1 cut(s) | 86 |
| BstF5I | GGATG | 1 cut(s) | 246 |
| BstFNI | CGCG | 1 cut(s) | 403 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 123 |
| BstSFI | CTRYAG | 1 cut(s) | 100 |
| BstUI | CGCG | 1 cut(s) | 403 |
| BsuRI | GGCC | 3 cut(s) | 126, 282, 377 |
| BtsCI | GGATG | 1 cut(s) | 246 |
| Cfr10I | RCCGGY | 1 cut(s) | 377 |
| Csp6I | GTAC | 2 cut(s) | 189, 295 |
| CviJI | RGCY | 7 cut(s) | 33, 90, 117, 126, 282, 310, 377 |
| CviKI_1 | RGCY | 7 cut(s) | 33, 90, 117, 126, 282, 310, 377 |
| CviQI | GTAC | 2 cut(s) | 189, 295 |
| DdeI | CTNAG | 1 cut(s) | 86 |
| EaeI | YGGCCR | 2 cut(s) | 124, 375 |
| Eam1104I | CTCTTC | 1 cut(s) | 304 |
| EarI | CTCTTC | 1 cut(s) | 304 |
| FaiI | YATR | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 127 |
| FokI | GGATG | 1 cut(s) | 253 |
| Fsp4HI | GCNGC | 1 cut(s) | 127 |
| GluI | GCNGC | 1 cut(s) | 127 |
| GsaI | CCCAGC | 1 cut(s) | 240 |
| HaeIII | GGCC | 3 cut(s) | 126, 282, 377 |
| HapII | CCGG | 1 cut(s) | 378 |
| HinfI | GANTC | 1 cut(s) | 370 |
| HpaII | CCGG | 1 cut(s) | 378 |
| HphI | GGTGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 2 cut(s) | 6, 205 |
| Hpy99I | CGWCG | 1 cut(s) | 398 |
| HpyCH4V | TGCA | 1 cut(s) | 146 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 123 |
| HpyF3I | CTNAG | 1 cut(s) | 86 |
| LpnPI | CCDG | 6 cut(s) | 192, 218, 222, 326, 359, 391 |
| LweI | GCATC | 1 cut(s) | 114 |
| MboII | GAAGA | 4 cut(s) | 37, 100, 291, 347 |
| MluCI | AATT | 1 cut(s) | 364 |
| MlyI | GAGTC | 1 cut(s) | 364 |
| MnlI | CCTC | 4 cut(s) | 44, 80, 257, 293 |
| MseI | TTAA | 1 cut(s) | 363 |
| MspI | CCGG | 1 cut(s) | 378 |
| MvnI | CGCG | 1 cut(s) | 403 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 123 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 393 |
| PkrI | GCNGC | 1 cut(s) | 128 |
| PleI | GAGTC | 1 cut(s) | 364 |
| PpsI | GAGTC | 1 cut(s) | 364 |
| PspFI | CCCAGC | 1 cut(s) | 236 |
| RsaI | GTAC | 2 cut(s) | 190, 296 |
| RsaNI | GTAC | 2 cut(s) | 189, 295 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| SatI | GCNGC | 1 cut(s) | 127 |
| ScaI | AGTACT | 1 cut(s) | 296 |
| SchI | GAGTC | 1 cut(s) | 364 |
| SetI | ASST | 6 cut(s) | 15, 92, 101, 119, 168, 268 |
| SfaNI | GCATC | 1 cut(s) | 114 |
| SfcI | CTRYAG | 1 cut(s) | 100 |
| Sse9I | AATT | 1 cut(s) | 364 |
| SsiI | CCGC | 2 cut(s) | 127, 401 |
| TaqI | TCGA | 2 cut(s) | 285, 396 |
| TasI | AATT | 1 cut(s) | 364 |
| TatI | WGTACW | 1 cut(s) | 294 |
| TauI | GCSGC | 1 cut(s) | 129 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TspDTI | ATGAA | 2 cut(s) | 49, 130 |
| TspGWI | ACGGA | 1 cut(s) | 148 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 119 |
| ZrmI | AGTACT | 1 cut(s) | 296 |