Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001239

Physical Location & Seq

Genomic Coordinates Forward (+)

32547182 .. 32548529

Gene Structure 1348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G348800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 459 bp

ATGGAGAAGACGGTGAGCGTGAACGTGAGAGCGGAGATGGAGAAGCTGAGCCCGGAGCAGTTGAAGGCAGTCAAGGAACAAACTGATATGGAAGTCAATCTTCTTCAGGACTCCCTCAACAACATCCGTACAGCCACCACTCGCCTCGAGATCGCCTCCTCCGCTCTCCACGACCTCTCCCTGCGCCCTCAGGGCAAGAAGATGCTCGTCCCTCTTACGGCGTCCCTTTATGTCCCCGGCACCCTCCACGACGCCCACCAAGTCCTCGTCGACGTCGGCACCGGTTACTTCATCGAGAAAACCATGCCTCAGGCCAAAGATTACTGCGAACGTAAGATCAGCTTGCTCAAATCTAATTTTGAGCAGCTTGTCGAGGTTGCTTCTAAAAAGAAGAGCATCTCGGATGAAGCTGGGGCAGTTTTGCAAGCCAAGTTGAAGCAGTTGGCTCCTGCAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016272 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Prefoldin

Protein Analysis

153

Amino Acids

16.79

Weight (kDa)

7.82

Isoelectric Point (pI)

39.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23290
fragaria_vesca	FvH4_4g37090
malus_domestica	MD13G1003600.v1.1 MD16G1003800.v1.1
prunus_persica	Prupe.1G348800_v2.0.a1
pyrus_communis	pycom13g00310
rosa_chinensis	RchiOBHm_Chr1g0343381 RchiOBHm_Chr2g0169341 RchiOBHm_Chr3g0478071 RchiOBHm_Chr4g0389221 RchiOBHm_Chr4g0391031 RchiOBHm_Chr4g0391701 RchiOBHm_Chr4g0446851 RchiOBHm_Chr5g0039981 RchiOBHm_Chr5g0067401 RchiOBHm_Chr5g0070771 RchiOBHm_Chr6g0253901 RchiOBHm_Chr6g0266371 RchiOBHm_Chr6g0274601
rosa_laevigata	RLG00000005625
rosa_multiflora	Rmu_sc0004202.1_g000004
rosa_roxburghii	Rroxscaffold_5G00387210
rosa_rugosa	Rorug02G0613400 Rorug04G0375100
rosa_samantha	Rh2AG179300 Rh2AG241500 Rh2BG102100 Rh2CG104500 Rh2CG592400 Rh2DG185100 Rh2DG249500 Rh4AG107800 Rh4AG208800 Rh4AG436600 Rh4BG029100 Rh4BG445700 Rh4CG463000 Rh4DG444400 Rh6AG064400 Rh6AG236900 Rh6AG238600 Rh6BG243300 Rh6DG194000
rosa_wichuraiana	Rw0G020890 Rw1G006200 Rw2G050650 Rw3G023620 Rw4G006200 Rw4G037350 Rw5G014850 Rw5G015450 Rw6G004540 Rw6G020620 Rw6G020840 Rw7G017030 Rw7G028200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	276
AccB1I	GGYRCC	2 cut(s)	239, 278
AccBSI	CCGCTC	2 cut(s)	32, 164
AccI	GTMKAC	1 cut(s)	270
AciI	CCGC	2 cut(s)	32, 162
AcuI	CTGAAG	1 cut(s)	89
AcyI	GRCGYC	3 cut(s)	221, 252, 273
AfaI	GTAC	1 cut(s)	130
AfiI	CCNNNNNNNGG	1 cut(s)	217
AgeI	ACCGGT	1 cut(s)	281
AgsI	TTSAA	2 cut(s)	64, 436
AluBI	AGCT	4 cut(s)	46, 342, 367, 410
AluI	AGCT	4 cut(s)	46, 342, 367, 410
Ama87I	CYCGRG	1 cut(s)	146
AoxI	GGCC	1 cut(s)	312
ApeKI	GCWGC	1 cut(s)	364
AsiGI	ACCGGT	1 cut(s)	281
AspLEI	GCGC	1 cut(s)	186
AsuC2I	CCSGG	2 cut(s)	53, 237
AsuHPI	GGTGA	1 cut(s)	25
AvaI	CYCGRG	1 cut(s)	146
AxyI	CCTNAGG	2 cut(s)	189, 309
BanI	GGYRCC	2 cut(s)	239, 278
BanII	GRGCYC	1 cut(s)	53
BbsI	GAAGAC	1 cut(s)	14
BbvI	GCAGC	1 cut(s)	376
BccI	CCATC	1 cut(s)	31
BceAI	ACGGC	1 cut(s)	234
BcnI	CCSGG	2 cut(s)	53, 237
BglI	GCCNNNNNGGC	1 cut(s)	192
BisI	GCNGC	1 cut(s)	365
BlpI	GCTNAGC	1 cut(s)	47
BlsI	GCNGC	1 cut(s)	366
Bme1390I	CCNGG	2 cut(s)	53, 237
BmeT110I	CYCGRG	1 cut(s)	146
BmiI	GGNNCC	3 cut(s)	241, 280, 447
BmrFI	CCNGG	2 cut(s)	53, 237
BmsI	GCATC	2 cut(s)	192, 405
BpiI	GAAGAC	1 cut(s)	14
BplI	GAGNNNNNCTC	2 cut(s)	140, 172
Bpu1102I	GCTNAGC	1 cut(s)	47
BpuMI	CCSGG	2 cut(s)	53, 237
BsaHI	GRCGYC	3 cut(s)	221, 252, 273
BsaJI	CCNNGG	1 cut(s)	235
BsaWI	WCCGGW	1 cut(s)	281
BsaXI	ACNNNNNCTCC	2 cut(s)	161, 191
Bsc4I	CCNNNNNNNGG	1 cut(s)	217
Bse118I	RCCGGY	1 cut(s)	281
Bse21I	CCTNAGG	2 cut(s)	189, 309
BseDI	CCNNGG	1 cut(s)	235
BseGI	GGATG	2 cut(s)	123, 409
BseLI	CCNNNNNNNGG	1 cut(s)	217
BseMII	CTCAG	3 cut(s)	38, 203, 323
BseRI	GAGGAG	1 cut(s)	148
BseXI	GCAGC	1 cut(s)	376
BseYI	CCCAGC	1 cut(s)	410
BshFI	GGCC	1 cut(s)	314
BshNI	GGYRCC	2 cut(s)	239, 278
BshTI	ACCGGT	1 cut(s)	281
BsiHKCI	CYCGRG	1 cut(s)	146
BsiSI	CCGG	3 cut(s)	53, 237, 282
BslFI	GGGAC	3 cut(s)	194, 208, 218
BslI	CCNNNNNNNGG	1 cut(s)	217
BsmFI	GGGAC	3 cut(s)	194, 208, 218
BsnI	GGCC	1 cut(s)	314
BsoBI	CYCGRG	1 cut(s)	146
Bsp1286I	GDGCHC	1 cut(s)	53
Bsp143I	GATC	2 cut(s)	150, 336
Bsp1720I	GCTNAGC	1 cut(s)	47
BspACI	CCGC	2 cut(s)	32, 162
BspANI	GGCC	1 cut(s)	314
BspCNI	CTCAG	3 cut(s)	39, 202, 322
BspLI	GGNNCC	3 cut(s)	241, 280, 447
BspQI	GCTCTTC	1 cut(s)	386
BspT107I	GGYRCC	2 cut(s)	239, 278
BsrBI	CCGCTC	2 cut(s)	32, 164
BsrFI	RCCGGY	1 cut(s)	281
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	1 cut(s)	235
BssMI	GATC	2 cut(s)	150, 336
BssNI	GRCGYC	3 cut(s)	221, 252, 273
Bst4CI	ACNGT	1 cut(s)	13
Bst6I	CTCTTC	1 cut(s)	386
BstACI	GRCGYC	3 cut(s)	221, 252, 273
BstC8I	GCNNGC	2 cut(s)	344, 426
BstDEI	CTNAG	3 cut(s)	47, 189, 309
BstF5I	GGATG	2 cut(s)	123, 409
BstHHI	GCGC	1 cut(s)	186
BstKTI	GATC	2 cut(s)	153, 339
BstMBI	GATC	2 cut(s)	150, 336
BstMWI	GCNNNNNNNGC	2 cut(s)	161, 192
BstSCI	CCNGG	2 cut(s)	51, 235
BstV1I	GCAGC	1 cut(s)	376
BstV2I	GAAGAC	1 cut(s)	14
Bsu36I	CCTNAGG	2 cut(s)	189, 309
BsuRI	GGCC	1 cut(s)	314
BtsCI	GGATG	2 cut(s)	123, 409
Cac8I	GCNNGC	2 cut(s)	344, 426
CfoI	GCGC	1 cut(s)	186
Cfr10I	RCCGGY	1 cut(s)	281
CseI	GACGC	2 cut(s)	210, 260
Csp6I	GTAC	1 cut(s)	129
CspAI	ACCGGT	1 cut(s)	281
CviAII	CATG	1 cut(s)	304
CviJI	RGCY	9 cut(s)	46, 51, 134, 314, 342, 367, 410, 428, 446
CviKI_1	RGCY	9 cut(s)	46, 51, 134, 314, 342, 367, 410, 428, 446
CviQI	GTAC	1 cut(s)	129
DdeI	CTNAG	3 cut(s)	47, 189, 309
DpnI	GATC	2 cut(s)	152, 338
DpnII	GATC	2 cut(s)	150, 336
Eam1104I	CTCTTC	1 cut(s)	386
EarI	CTCTTC	1 cut(s)	386
Eco24I	GRGCYC	1 cut(s)	53
Eco57I	CTGAAG	1 cut(s)	89
Eco81I	CCTNAGG	2 cut(s)	189, 309
Eco88I	CYCGRG	1 cut(s)	146
EcoT38I	GRGCYC	1 cut(s)	53
FaeI	CATG	1 cut(s)	307
FaiI	YATR	4 cut(s)	89, 231, 305, 457
FalI	AAGNNNNNCTT	4 cut(s)	84, 116, 326, 358
FaqI	GGGAC	3 cut(s)	194, 208, 218
FatI	CATG	1 cut(s)	303
FblI	GTMKAC	1 cut(s)	270
Fnu4HI	GCNGC	1 cut(s)	365
FokI	GGATG	2 cut(s)	110, 416
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	1 cut(s)	365
GlaI	GCGC	1 cut(s)	185
GluI	GCNGC	1 cut(s)	365
GsaI	CCCAGC	1 cut(s)	414
HaeIII	GGCC	1 cut(s)	314
HapII	CCGG	3 cut(s)	53, 237, 282
HgaI	GACGC	2 cut(s)	210, 260
HhaI	GCGC	1 cut(s)	186
Hin1I	GRCGYC	3 cut(s)	221, 252, 273
Hin1II	CATG	1 cut(s)	307
Hin6I	GCGC	1 cut(s)	184
HinP1I	GCGC	1 cut(s)	184
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HinfI	GANTC	1 cut(s)	110
HpaII	CCGG	3 cut(s)	53, 237, 282
HphI	GGTGA	1 cut(s)	25
Hpy166II	GTNNAC	2 cut(s)	22, 271
Hpy188I	TCNGA	1 cut(s)	403
Hpy188III	TCNNGA	3 cut(s)	107, 148, 295
Hpy8I	GTNNAC	2 cut(s)	22, 271
Hpy99I	CGWCG	4 cut(s)	254, 272, 275, 278
HpyAV	CCTTC	1 cut(s)	58
HpyCH4III	ACNGT	1 cut(s)	13
HpyCH4IV	ACGT	3 cut(s)	24, 273, 331
HpyCH4V	TGCA	2 cut(s)	424, 452
HpyF10VI	GCNNNNNNNGC	2 cut(s)	161, 192
HpyF3I	CTNAG	3 cut(s)	47, 189, 309
HpySE526I	ACGT	3 cut(s)	24, 273, 331
Hsp92I	GRCGYC	3 cut(s)	221, 252, 273
Hsp92II	CATG	1 cut(s)	307
HspAI	GCGC	1 cut(s)	184
Kzo9I	GATC	2 cut(s)	150, 336
LguI	GCTCTTC	1 cut(s)	386
LmnI	GCTCC	2 cut(s)	55, 451
LpnPI	CCDG	8 cut(s)	66, 92, 176, 194, 250, 295, 296, 396
Lsp1109I	GCAGC	1 cut(s)	376
LweI	GCATC	2 cut(s)	192, 405
MaeII	ACGT	3 cut(s)	24, 273, 331
MaeIII	GTNAC	1 cut(s)	284
MalI	GATC	2 cut(s)	152, 338
MbiI	CCGCTC	2 cut(s)	32, 164
MboI	GATC	2 cut(s)	150, 336
MboII	GAAGA	5 cut(s)	19, 92, 95, 211, 403
MhlI	GDGCHC	1 cut(s)	53
MluCI	AATT	1 cut(s)	355
MlyI	GAGTC	1 cut(s)	104
MspI	CCGG	3 cut(s)	53, 237, 282
MspR9I	CCNGG	2 cut(s)	53, 237
MwoI	GCNNNNNNNGC	2 cut(s)	161, 192
NciI	CCSGG	2 cut(s)	53, 237
NdeII	GATC	2 cut(s)	150, 336
NlaIII	CATG	1 cut(s)	307
NlaIV	GGNNCC	3 cut(s)	241, 280, 447
PaeR7I	CTCGAG	1 cut(s)	146
PciSI	GCTCTTC	1 cut(s)	386
PinAI	ACCGGT	1 cut(s)	281
PkrI	GCNGC	1 cut(s)	366
PleI	GAGTC	1 cut(s)	104
PpsI	GAGTC	1 cut(s)	104
PspFI	CCCAGC	1 cut(s)	410
PspN4I	GGNNCC	3 cut(s)	241, 280, 447
RsaI	GTAC	1 cut(s)	130
RsaNI	GTAC	1 cut(s)	129
SalI	GTCGAC	1 cut(s)	269
SapI	GCTCTTC	1 cut(s)	386
SatI	GCNGC	1 cut(s)	365
Sau3AI	GATC	2 cut(s)	150, 336
SchI	GAGTC	1 cut(s)	104
ScrFI	CCNGG	2 cut(s)	53, 237
SduI	GDGCHC	1 cut(s)	53
SetI	ASST	9 cut(s)	27, 48, 177, 276, 334, 344, 369, 378, 412
SfaNI	GCATC	2 cut(s)	192, 405
Sfr274I	CTCGAG	1 cut(s)	146
SgrDI	CGTCGACG	1 cut(s)	269
SlaI	CTCGAG	1 cut(s)	146
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
Sse9I	AATT	1 cut(s)	355
SsiI	CCGC	2 cut(s)	32, 162
StyD4I	CCNGG	2 cut(s)	51, 235
TaaI	ACNGT	1 cut(s)	13
TaiI	ACGT	3 cut(s)	27, 276, 334
TaqI	TCGA	4 cut(s)	147, 270, 294, 372
TasI	AATT	1 cut(s)	355
TseI	GCWGC	1 cut(s)	364
TspDTI	ATGAA	2 cut(s)	280, 420
TspGWI	ACGGA	1 cut(s)	116
XhoI	CTCGAG	1 cut(s)	146
XmiI	GTMKAC	1 cut(s)	270
ZraI	GACGTC	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.