Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003257

Physical Location & Seq

Genomic Coordinates Forward (+)

32575087 .. 32578045

Gene Structure 2959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G349200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGTTGAGTGGTGGTGGTGGCTGCTCTCGTCTTTCCAATCATCTACGACTGCGAGACTGCGACGTCCGCCTCCACCACCAGCACCTTGGCTCTGGCTCTGGCTCTGCCTTTGGCTTCGGCTTCGGATTTGTCTTTGGCTTTGGATTAGGGCGGGTAGGGTTTTACAACAACAGAGTCGCCCAGCTACGCTGCTGCCCTTGCCCTTTCAAACCCTTGTCTGCTCACAGAATGCCCTTTTCCTCTTTCGTTTCTTCCAAGTCTCCTCCCGACATTCCCACACTCTCCAATTGTTTTAGCCAACGAGAAGATGAACGTGAGCTTTTCTCCGAAGGATTGACCTCAGTGGCAGGAGGAATAGTTGCGCTGGGAAAATTTGATGCCCTTCACATTGGTCATCGAGAGCTCGCGATTCAAGCATCAAAGGTTGGACCTCCTTTCCTTTTGTCATTTGTCGGAATGGCAGAAGTACTGGGTTGGGAACCAAGGGCACCCATAGTTGCCAGATGCGATCGAAAGCGGGTTCTTTCCTCTTGGGCCCCATACTGTGGTAACATGGCACCCACAGAGTTTCAGATTGAATTTTCTAGTGTTCGACATCTAACACCACGGCAATTTGTTGAGAAGTTATTGAAAGAGCTTGGAGTGCGTGGAGTTGTGGCAGGTGAAAACTACCGATTTGGATATAAAGCTGCTGGTGATGCCACAGAGCTGGTGAGGTTGTGTGAAGAGTATGGTATTGGGGCATATATAATAAATTCTGTTATGGACAAGAACGATTACTCTATAAATATAAACTCGAGTGATGTGAAAGACAGAGGACAGGTTTCTTCTACTCGTGTTCGACGTGCCCTTGCTGTAGGAGATATGAAGTATGTGTCACAGCTTTTGGGTCGCCAACATCGTCTGATATTGATGGCAAAGGAGCAGGAAGGATTTCGTTGCTGCAAAAACAAATTGTCAGTTCCAAAGTCTTGTTTGTTAAATCTAGGTCCAAAGGAGGGTCTATATGAGAAGTGTTATGTTTTCATAGGTGAAGATGATGAGCTATTATCATGTAATGTAGTTATTGACACGGAATATGTCCATATAGAAATGGACGAGGTAGGTGCATCATGTAATGTAGTTGGTACACAGGACCTGAGCCTCTTACGTATTGAATTTGGTGATTCTCAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003919 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006732 GO:0006747 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009507 GO:0009536 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0034654 GO:0042726 GO:0042727 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046443 GO:0046483 GO:0051186 GO:0051188 GO:0055086 GO:0070566 GO:0071704 GO:0072387 GO:0072388 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_syn

Protein Analysis

393

Amino Acids

43.23

Weight (kDa)

7.87

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08340 AT5G08340 AT5G23330
fragaria_vesca	FvH4_4g37140
malus_domestica	MD13G1003200.v1.1 MD16G1004200.v1.1
prunus_persica	Prupe.1G349200_v2.0.a1 Prupe.1G349200_v2.0.a1 Prupe.1G349200_v2.0.a1 Prupe.1G349200_v2.0.a1
pyrus_communis	pycom13g00270 pycom16g00180
rosa_chinensis	RchiOBHm_Chr2g0144991 RchiOBHm_Chr4g0446941 RchiOBHm_Chr5g0081501 RchiOBHm_Chr6g0272191 RchiOBHm_Chr7g0231651
rosa_laevigata	RLG00000001051 RLG00000020160 RLG00000035583 RLG00000035993
rosa_multiflora	Rmu_co8227451.1_g000001 Rmu_sc0000015.1_g000048 Rmu_sc0002784.1_g000009
rosa_roxburghii	Rroxscaffold_3G00229270 Rroxscaffold_3G00237760
rosa_rugosa	Rorug01G0193900 Rorug01G0194000
rosa_samantha	Rh2DG102300 Rh4AG437800 Rh4BG446700 Rh4CG464000 Rh4DG445400 Rh5AG442200 Rh5DG474200 Rh6BG133900
rosa_wichuraiana	Rw4G037440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	650
AasI	GACNNNNNNGTC	1 cut(s)	62
AatII	GACGTC	1 cut(s)	66
Acc36I	ACCTGC	1 cut(s)	650
AccB1I	GGYRCC	2 cut(s)	487, 556
AccB7I	CCANNNNNTGG	1 cut(s)	545
AccII	CGCG	1 cut(s)	407
AciI	CCGC	3 cut(s)	67, 151, 517
AcsI	RAATTY	4 cut(s)	371, 578, 754, 1157
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	2 cut(s)	468, 1129
AfiI	CCNNNNNNNGG	2 cut(s)	545, 998
AgsI	TTSAA	5 cut(s)	208, 413, 578, 631, 1157
AjiI	CACGTC	1 cut(s)	845
AluBI	AGCT	8 cut(s)	184, 319, 403, 637, 689, 709, 883, 1045
AluI	AGCT	8 cut(s)	184, 319, 403, 637, 689, 709, 883, 1045
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	2 cut(s)	48, 264
AlwNI	CAGNNNCTG	1 cut(s)	1138
Ama87I	CYCGRG	1 cut(s)	796
AoxI	GGCC	1 cut(s)	534
ApaI	GGGCCC	1 cut(s)	538
ApeKI	GCWGC	5 cut(s)	21, 189, 192, 689, 942
ApoI	RAATTY	4 cut(s)	371, 578, 754, 1157
Asp700I	GAANNNNTTC	1 cut(s)	933
AspLEI	GCGC	1 cut(s)	364
AspS9I	GGNCC	5 cut(s)	428, 534, 535, 989, 1135
AsuHPI	GGTGA	5 cut(s)	674, 707, 724, 1043, 1175
AvaI	CYCGRG	1 cut(s)	796
AvaII	GGWCC	3 cut(s)	428, 989, 1135
BaeGI	GKGCMC	3 cut(s)	490, 538, 850
BanI	GGYRCC	2 cut(s)	487, 556
BanII	GRGCYC	2 cut(s)	405, 538
BauI	CACGAG	1 cut(s)	834
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	5 cut(s)	8, 176, 179, 676, 929
BccI	CCATC	1 cut(s)	907
BceAI	ACGGC	1 cut(s)	623
BcgI	CGANNNNNNTGC	2 cut(s)	1088, 1122
BcoDI	GTCTC	2 cut(s)	48, 264
BfaI	CTAG	2 cut(s)	585, 986
BfmI	CTRYAG	1 cut(s)	855
BfuAI	ACCTGC	1 cut(s)	650
BisI	GCNGC	5 cut(s)	22, 190, 193, 690, 943
BlsI	GCNGC	5 cut(s)	23, 191, 194, 691, 944
BmcAI	AGTACT	1 cut(s)	468
Bme18I	GGWCC	3 cut(s)	428, 989, 1135
BmeT110I	CYCGRG	1 cut(s)	796
BmgBI	CACGTC	1 cut(s)	845
BmgT120I	GGNCC	5 cut(s)	428, 534, 535, 989, 1135
BmiI	GGNNCC	5 cut(s)	480, 489, 536, 537, 558
BmrI	ACTGGG	1 cut(s)	479
BmsI	GCATC	5 cut(s)	367, 425, 494, 688, 1118
BmuI	ACTGGG	1 cut(s)	479
BplI	GAGNNNNNCTC	2 cut(s)	308, 340
Bpu10I	CCTNAGC	1 cut(s)	1139
BsaAI	YACGTR	1 cut(s)	1151
BsaHI	GRCGYC	1 cut(s)	63
BsaJI	CCNNGG	3 cut(s)	85, 482, 605
BsaXI	ACNNNNNCTCC	2 cut(s)	342, 372
Bsc4I	CCNNNNNNNGG	2 cut(s)	545, 998
Bse1I	ACTGG	1 cut(s)	474
BseDI	CCNNGG	3 cut(s)	85, 482, 605
BseLI	CCNNNNNNNGG	2 cut(s)	545, 998
BseMII	CTCAG	2 cut(s)	354, 1130
BseNI	ACTGG	1 cut(s)	474
BseRI	GAGGAG	1 cut(s)	252
BseSI	GKGCMC	3 cut(s)	490, 538, 850
BseXI	GCAGC	5 cut(s)	8, 176, 179, 676, 929
BseYI	CCCAGC	2 cut(s)	180, 364
Bsh1236I	CGCG	1 cut(s)	407
Bsh1285I	CGRYCG	1 cut(s)	511
BshFI	GGCC	1 cut(s)	536
BshNI	GGYRCC	2 cut(s)	487, 556
BsiEI	CGRYCG	1 cut(s)	511
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	1 cut(s)	796
BslI	CCNNNNNNNGG	2 cut(s)	545, 998
BsmAI	GTCTC	2 cut(s)	48, 264
BsmI	GAATGC	1 cut(s)	234
BsnI	GGCC	1 cut(s)	536
BsoBI	CYCGRG	1 cut(s)	796
Bsp120I	GGGCCC	1 cut(s)	534
Bsp1286I	GDGCHC	4 cut(s)	405, 490, 538, 850
Bsp143I	GATC	1 cut(s)	508
Bsp68I	TCGCGA	1 cut(s)	407
BspACI	CCGC	3 cut(s)	67, 151, 517
BspANI	GGCC	1 cut(s)	536
BspCNI	CTCAG	2 cut(s)	353, 1131
BspFNI	CGCG	1 cut(s)	407
BspLI	GGNNCC	5 cut(s)	480, 489, 536, 537, 558
BspMI	ACCTGC	1 cut(s)	650
BspT107I	GGYRCC	2 cut(s)	487, 556
BsrI	ACTGG	1 cut(s)	474
BssECI	CCNNGG	3 cut(s)	85, 482, 605
BssMI	GATC	1 cut(s)	508
BssNI	GRCGYC	1 cut(s)	63
BssSI	CACGAG	1 cut(s)	834
BssT1I	CCWWGG	2 cut(s)	85, 482
Bst2BI	CACGAG	1 cut(s)	834
Bst4CI	ACNGT	1 cut(s)	545
Bst6I	CTCTTC	1 cut(s)	720
BstACI	GRCGYC	1 cut(s)	63
BstBAI	YACGTR	1 cut(s)	1151
BstC8I	GCNNGC	1 cut(s)	405
BstDEI	CTNAG	3 cut(s)	340, 1139, 1170
BstDSI	CCRYGG	1 cut(s)	605
BstFNI	CGCG	1 cut(s)	407
BstHHI	GCGC	1 cut(s)	364
BstKTI	GATC	1 cut(s)	511
BstMAI	GTCTC	2 cut(s)	48, 264
BstMBI	GATC	1 cut(s)	508
BstMCI	CGRYCG	1 cut(s)	511
BstMWI	GCNNNNNNNGC	5 cut(s)	66, 198, 413, 643, 698
BstSFI	CTRYAG	1 cut(s)	855
BstSLI	GKGCMC	3 cut(s)	490, 538, 850
BstSNI	TACGTA	1 cut(s)	1151
BstUI	CGCG	1 cut(s)	407
BstV1I	GCAGC	5 cut(s)	8, 176, 179, 676, 929
BstXI	CCANNNNNNTGG	2 cut(s)	86, 709
BsuRI	GGCC	1 cut(s)	536
BtgI	CCRYGG	1 cut(s)	605
BtrI	CACGTC	1 cut(s)	845
BtsIMutI	CAGTG	1 cut(s)	348
BtuMI	TCGCGA	1 cut(s)	407
BveI	ACCTGC	1 cut(s)	650
Cac8I	GCNNGC	1 cut(s)	405
CaiI	CAGNNNCTG	1 cut(s)	1138
CfoI	GCGC	1 cut(s)	364
Cfr13I	GGNCC	5 cut(s)	428, 534, 535, 989, 1135
Csp6I	GTAC	2 cut(s)	467, 1128
CviAII	CATG	3 cut(s)	553, 1053, 1113
CviQI	GTAC	2 cut(s)	467, 1128
DdeI	CTNAG	3 cut(s)	340, 1139, 1170
DpnI	GATC	1 cut(s)	510
DpnII	GATC	1 cut(s)	508
DrdI	GACNNNNNNGTC	1 cut(s)	62
DseDI	GACNNNNNNGTC	1 cut(s)	62
Eam1104I	CTCTTC	1 cut(s)	720
EarI	CTCTTC	1 cut(s)	720
EciI	GGCGGA	1 cut(s)	56
Ecl136II	GAGCTC	1 cut(s)	403
Eco105I	TACGTA	1 cut(s)	1151
Eco130I	CCWWGG	2 cut(s)	85, 482
Eco24I	GRGCYC	2 cut(s)	405, 538
Eco47I	GGWCC	3 cut(s)	428, 989, 1135
Eco53kI	GAGCTC	1 cut(s)	403
Eco88I	CYCGRG	1 cut(s)	796
EcoICRI	GAGCTC	1 cut(s)	403
EcoO109I	RGGNCCY	2 cut(s)	535, 1135
EcoT14I	CCWWGG	2 cut(s)	85, 482
EcoT38I	GRGCYC	2 cut(s)	405, 538
ErhI	CCWWGG	2 cut(s)	85, 482
FaeI	CATG	3 cut(s)	556, 1056, 1116
FatI	CATG	3 cut(s)	552, 1052, 1112
FauI	CCCGC	2 cut(s)	144, 510
Fnu4HI	GCNGC	5 cut(s)	22, 190, 193, 690, 943
FriOI	GRGCYC	2 cut(s)	405, 538
Fsp4HI	GCNGC	5 cut(s)	22, 190, 193, 690, 943
FspBI	CTAG	2 cut(s)	585, 986
GlaI	GCGC	1 cut(s)	363
GluI	GCNGC	5 cut(s)	22, 190, 193, 690, 943
GsaI	CCCAGC	2 cut(s)	184, 368
HaeIII	GGCC	1 cut(s)	536
HhaI	GCGC	1 cut(s)	364
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	3 cut(s)	556, 1056, 1116
Hin6I	GCGC	1 cut(s)	362
HinP1I	GCGC	1 cut(s)	362
HinfI	GANTC	3 cut(s)	174, 409, 1166
HphI	GGTGA	5 cut(s)	674, 707, 724, 1043, 1175
Hpy166II	GTNNAC	1 cut(s)	1130
Hpy188I	TCNGA	5 cut(s)	125, 328, 455, 573, 906
Hpy188III	TCNNGA	4 cut(s)	266, 398, 406, 1176
Hpy8I	GTNNAC	1 cut(s)	1130
Hpy99I	CGWCG	2 cut(s)	65, 846
HpyAV	CCTTC	3 cut(s)	323, 392, 923
HpyCH4III	ACNGT	1 cut(s)	545
HpyCH4IV	ACGT	4 cut(s)	63, 313, 844, 1150
HpyCH4V	TGCA	2 cut(s)	945, 1109
HpyF10VI	GCNNNNNNNGC	5 cut(s)	66, 198, 413, 643, 698
HpyF3I	CTNAG	3 cut(s)	340, 1139, 1170
HpySE526I	ACGT	4 cut(s)	63, 313, 844, 1150
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	3 cut(s)	556, 1056, 1116
HspAI	GCGC	1 cut(s)	362
Kzo9I	GATC	1 cut(s)	508
LmnI	GCTCC	1 cut(s)	922
Lsp1109I	GCAGC	5 cut(s)	8, 176, 179, 676, 929
LweI	GCATC	5 cut(s)	367, 425, 494, 688, 1118
MaeI	CTAG	2 cut(s)	585, 986
MaeII	ACGT	4 cut(s)	63, 313, 844, 1150
MaeIII	GTNAC	2 cut(s)	548, 876
MalI	GATC	1 cut(s)	510
MboI	GATC	1 cut(s)	508
MboII	GAAGA	5 cut(s)	243, 317, 737, 819, 1046
MfeI	CAATTG	1 cut(s)	286
MhlI	GDGCHC	4 cut(s)	405, 490, 538, 850
MluCI	AATT	7 cut(s)	286, 371, 578, 611, 754, 953, 1157
MlyI	GAGTC	1 cut(s)	183
MmeI	TCCRAC	2 cut(s)	406, 433
MroXI	GAANNNNTTC	1 cut(s)	933
MseI	TTAA	1 cut(s)	980
MunI	CAATTG	1 cut(s)	286
Mva1269I	GAATGC	1 cut(s)	234
MvnI	CGCG	1 cut(s)	407
MwoI	GCNNNNNNNGC	5 cut(s)	66, 198, 413, 643, 698
NdeII	GATC	1 cut(s)	508
NlaIII	CATG	3 cut(s)	556, 1056, 1116
NlaIV	GGNNCC	5 cut(s)	480, 489, 536, 537, 558
NmuCI	GTSAC	1 cut(s)	876
NruI	TCGCGA	1 cut(s)	407
PaeR7I	CTCGAG	1 cut(s)	796
PaqCI	CACCTGC	1 cut(s)	650
PcsI	WCGNNNNNNNCGW	2 cut(s)	841, 898
PctI	GAATGC	1 cut(s)	234
PdmI	GAANNNNTTC	1 cut(s)	933
PfeI	GAWTC	2 cut(s)	409, 1166
PflMI	CCANNNNNTGG	1 cut(s)	545
PkrI	GCNGC	5 cut(s)	23, 191, 194, 691, 944
Ple19I	CGATCG	1 cut(s)	511
PleI	GAGTC	1 cut(s)	182
PpsI	GAGTC	1 cut(s)	182
Ppu21I	YACGTR	1 cut(s)	1151
PpuMI	RGGWCCY	1 cut(s)	1135
Psp124BI	GAGCTC	1 cut(s)	405
Psp5II	RGGWCCY	1 cut(s)	1135
PspFI	CCCAGC	2 cut(s)	180, 364
PspN4I	GGNNCC	5 cut(s)	480, 489, 536, 537, 558
PspOMI	GGGCCC	1 cut(s)	534
PspPI	GGNCC	5 cut(s)	428, 534, 535, 989, 1135
PspPPI	RGGWCCY	1 cut(s)	1135
PspXI	VCTCGAGB	1 cut(s)	796
PstNI	CAGNNNCTG	1 cut(s)	1138
PvuI	CGATCG	1 cut(s)	511
RruI	TCGCGA	1 cut(s)	407
RsaI	GTAC	2 cut(s)	468, 1129
RsaNI	GTAC	2 cut(s)	467, 1128
SacI	GAGCTC	1 cut(s)	405
SaqAI	TTAA	1 cut(s)	980
SatI	GCNGC	5 cut(s)	22, 190, 193, 690, 943
Sau3AI	GATC	1 cut(s)	508
Sau96I	GGNCC	5 cut(s)	428, 534, 535, 989, 1135
ScaI	AGTACT	1 cut(s)	468
SchI	GAGTC	1 cut(s)	183
SduI	GDGCHC	4 cut(s)	405, 490, 538, 850
SfaNI	GCATC	5 cut(s)	367, 425, 494, 688, 1118
SfcI	CTRYAG	1 cut(s)	855
Sfr274I	CTCGAG	1 cut(s)	796
SinI	GGWCC	3 cut(s)	428, 989, 1135
SlaI	CTCGAG	1 cut(s)	796
SmlI	CTYRAG	1 cut(s)	796
SmoI	CTYRAG	1 cut(s)	796
SnaBI	TACGTA	1 cut(s)	1151
Sse9I	AATT	7 cut(s)	286, 371, 578, 611, 754, 953, 1157
SsiI	CCGC	3 cut(s)	67, 151, 517
SspMI	CTAG	2 cut(s)	585, 986
SstI	GAGCTC	1 cut(s)	405
StyI	CCWWGG	2 cut(s)	85, 482
TaaI	ACNGT	1 cut(s)	545
TaiI	ACGT	4 cut(s)	66, 316, 847, 1153
TaqI	TCGA	5 cut(s)	397, 511, 592, 797, 841
TasI	AATT	7 cut(s)	286, 371, 578, 611, 754, 953, 1157
TatI	WGTACW	1 cut(s)	466
TfiI	GAWTC	2 cut(s)	409, 1166
Tru1I	TTAA	1 cut(s)	980
Tru9I	TTAA	1 cut(s)	980
TscAI	CASTG	1 cut(s)	348
TseFI	GTSAC	1 cut(s)	876
TseI	GCWGC	5 cut(s)	21, 189, 192, 689, 942
Tsp45I	GTSAC	1 cut(s)	876
TspDTI	ATGAA	3 cut(s)	324, 881, 1015
TspGWI	ACGGA	1 cut(s)	1088
TspRI	CASTG	1 cut(s)	348
Van91I	CCANNNNNTGG	1 cut(s)	545
VpaK11BI	GGWCC	3 cut(s)	428, 989, 1135
XapI	RAATTY	4 cut(s)	371, 578, 754, 1157
XcmI	CCANNNNNNNNNTGG	1 cut(s)	83
XhoI	CTCGAG	1 cut(s)	796
XmnI	GAANNNNTTC	1 cut(s)	933
XspI	CTAG	2 cut(s)	585, 986
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	1 cut(s)	468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.