Prupe.1G367400_v2.0.a1

Endoglucanase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
33620498 .. 33624700
4203 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G367400.1

Sequence Viewer

Length: 1581 bp
ATGGGAGCTAAATCAAGGTCCAAGGGGTGTTGGGCATGGCTGCTGGTGCTGGTGGTCCTGGCTCTCGTTGTCACTGCCATTGTCGTCGCAATCGTAAAGAAAAAATCTAACAGCTCCGACGACGACGACGGTCCCGTCCCCGGCCCTCCAGGCGCCATTACCCAGAAATACTCTGACGCTCTCAAACTCGCTGTGCAATTCTTCGACGTTCAGAAATCGGGTAAGTTGGTAGATAATAAGATATCATGGAGAGGGGATTCGGGTCTGAAAGATGGAAGCGATGAGAAATTGGATTTGTCCAAAGGAATGTATGATGCTGGGGATCACATGAAGTTTGGTTTTCCAATGGCATTTACTGCCACGGTGTTGTCGTGGTCGATTCTTGAGTATGGGGATCAAATGGATGCGGTGAATCAGTTACAAACTGCTCAAGGCTCCCTCAAGTGGATCACTGACTTCCTTGTTAATGCTCATCCTAAAGACAATGTGCTCTATATTCAGGTGGGTGACCCTAAAAAGGACCATGATTGTTGGAATAGGCCAGAAGACATGACCGGGAAGCGACCACTCACACAGATCAACTCATCTTCTCCAGGGACAGAGGTTGCAGCTGAAACTGCAGCTGCTATGGCTTCAGCATCTCTGGTCTTTAAGAAAAGTGATGCCACATATTCAGCCGCACTTCTTAAGCATGCCAAACAATTATTTACTTTTGCCGACAAAAACAGAGGCTCTTACAGTCAAAGCATCCCCGAGGTCCAGGAATTTTACAACTCAACAGGATATGGAGATGAGCTTCTGTGGGCAGCTGCCTGGCTTTACCATGCAACAGGGGATCAGTCATACCTAGATTATGTCACAGGGGACAATGGAGATGAGTTTGCTCAATTTGGTAAACCGACATGGTTCAGTTGGGATAACAAGCTTGCAGGAACCCAGGTTTTGCTATCCAGGTTGAGCTTCTTTGGTGGGAAAGATACCTCGGGCAATTCTGGCCTTCAGAAGTACAGGAAAACAGCTGAGGCTGTTATGTGTGGCCTCCTGCCAAACTCTCCAACAGCCACAAACAGCAGAACAGAGAATGGTCTGATATGGGTGAGTGAATGGAATGCTCTGCAGCATCCGGTTTCTTCTGCTTTCCTGGCTGCTCTTTATAGTGACTACATGCTTACATCTCGGACTTCAAAAATAGAGTGTGATGGAGATTCCTATAAGGCATCAGATATTCGGAAATTTGCTAGATCTCAGGCAAATTATGTGTTGGGAGAGAATCCTTTGAAAATGAGCTATCTTGTTGGATATGGGGATAAATATCCAAAATACGTTCACCATAGAGGAGCTTCGATCCCAGCCAATAAGAAGCCCAACTGCCGTGAAGGCTTCAAGTATCTAAATACAAAAGATCCCAACCCTAATGTAGCCGTTGGAGCACTTGTTGGTGGGCCATTCCTAAATGAAACTTACGTGGACGCCCGAAACAACTCGAGGCAAGGGGAGCCAAGCACATACAATAGTGCTCTCATCGTTGGCCTTCTATCAGGATTGGTCACCACCTCTTCAGCAGTTCAATCCTTCACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

527

Amino Acids

57.44

Weight (kDa)

7.07

Isoelectric Point (pI)

28.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 152
AciI CCGC 2 cut(s) 407, 678
AclWI GGATC 6 cut(s) 330, 402, 455, 843, 1339, 1397
AcsI RAATTY 2 cut(s) 764, 1232
AcuI CTGAAG 3 cut(s) 618, 983, 1542
AcyI GRCGYC 2 cut(s) 153, 1470
AfaI GTAC 1 cut(s) 1007
AfiI CCNNNNNNNGG 3 cut(s) 140, 444, 517
AflII CTTAAG 1 cut(s) 686
AgsI TTSAA 4 cut(s) 1185, 1279, 1384, 1568
AjnI CCWGG 8 cut(s) 57, 148, 592, 759, 812, 936, 950, 1140
Alw21I GWGCWC 3 cut(s) 492, 1432, 1519
AlwI GGATC 6 cut(s) 330, 402, 455, 843, 1339, 1397
Ama87I CYCGRG 3 cut(s) 752, 982, 1483
AoxI GGCC 6 cut(s) 142, 539, 994, 1036, 1442, 1528
ApeKI GCWGC 8 cut(s) 40, 608, 620, 623, 806, 809, 1117, 1145
ApoI RAATTY 2 cut(s) 764, 1232
AspLEI GCGC 1 cut(s) 155
AspS9I GGNCC 7 cut(s) 18, 55, 131, 143, 520, 757, 1442
AsuC2I CCSGG 2 cut(s) 141, 556
AsuHPI GGTGA 6 cut(s) 421, 518, 1108, 1319, 1540, 1567
AvaI CYCGRG 3 cut(s) 752, 982, 1483
AvaII GGWCC 5 cut(s) 18, 55, 131, 520, 757
BanI GGYRCC 1 cut(s) 152
BbsI GAAGAC 1 cut(s) 552
Bbv12I GWGCWC 3 cut(s) 492, 1432, 1519
BbvCI CCTCAGC 1 cut(s) 1020
BbvI GCAGC 8 cut(s) 27, 610, 620, 632, 796, 818, 1129, 1132
BccI CCATC 2 cut(s) 266, 1193
BceAI ACGGC 2 cut(s) 1356, 1406
BciT130I CCWGG 8 cut(s) 59, 150, 594, 761, 814, 938, 952, 1142
BcnI CCSGG 2 cut(s) 141, 556
BfaI CTAG 3 cut(s) 848, 1239, 1579
BfmI CTRYAG 2 cut(s) 618, 1115
BfoI RGCGCY 1 cut(s) 156
BfrI CTTAAG 1 cut(s) 686
BglI GCCNNNNNGGC 2 cut(s) 150, 1377
BglII AGATCT 1 cut(s) 1241
BisI GCNGC 9 cut(s) 41, 609, 621, 624, 678, 807, 810, 1118, 1146
BlsI GCNGC 9 cut(s) 42, 610, 622, 625, 679, 808, 811, 1119, 1147
Bme18I GGWCC 5 cut(s) 18, 55, 131, 520, 757
BmeT110I CYCGRG 3 cut(s) 752, 982, 1483
BmgT120I GGNCC 7 cut(s) 18, 55, 131, 143, 520, 757, 1442
BmiI GGNNCC 5 cut(s) 133, 154, 436, 934, 1497
BmsI GCATC 7 cut(s) 304, 394, 647, 652, 756, 1129, 1226
BoxI GACNNNNGTC 1 cut(s) 129
BpiI GAAGAC 1 cut(s) 552
BpmI CTGGAG 2 cut(s) 132, 576
Bpu10I CCTNAGC 1 cut(s) 1020
BpuEI CTTGAG 3 cut(s) 404, 414, 425
BpuMI CCSGG 2 cut(s) 141, 556
BsaAI YACGTR 1 cut(s) 1465
BsaBI GATNNNNATC 1 cut(s) 1311
BsaHI GRCGYC 2 cut(s) 153, 1470
BsaJI CCNNGG 7 cut(s) 21, 139, 360, 593, 753, 936, 981
BsaWI WCCGGW 1 cut(s) 1123
BsaXI ACNNNNNCTCC 2 cut(s) 1419, 1449
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 444, 517
Bse8I GATNNNNATC 1 cut(s) 1311
BseBI CCWGG 8 cut(s) 59, 150, 594, 761, 814, 938, 952, 1142
BseDI CCNNGG 7 cut(s) 21, 139, 360, 593, 753, 936, 981
BseGI GGATG 4 cut(s) 409, 472, 747, 1120
BseJI GATNNNNATC 1 cut(s) 1311
BseLI CCNNNNNNNGG 3 cut(s) 140, 444, 517
BseMII CTCAG 2 cut(s) 1011, 1259
BseRI GAGGAG 1 cut(s) 1350
BseXI GCAGC 8 cut(s) 27, 610, 620, 632, 796, 818, 1129, 1132
BseYI CCCAGC 2 cut(s) 317, 1348
BshFI GGCC 6 cut(s) 144, 541, 996, 1038, 1444, 1530
BshNI GGYRCC 1 cut(s) 152
BsiHKAI GWGCWC 3 cut(s) 492, 1432, 1519
BsiHKCI CYCGRG 3 cut(s) 752, 982, 1483
BsiSI CCGG 3 cut(s) 141, 555, 1124
BslFI GGGAC 4 cut(s) 117, 122, 610, 878
BslI CCNNNNNNNGG 3 cut(s) 140, 444, 517
BsmFI GGGAC 4 cut(s) 117, 122, 610, 878
BsmI GAATGC 1 cut(s) 1114
BsnI GGCC 6 cut(s) 144, 541, 996, 1038, 1444, 1530
BsoBI CYCGRG 3 cut(s) 752, 982, 1483
Bsp1286I GDGCHC 3 cut(s) 492, 1432, 1519
Bsp143I GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
BspACI CCGC 2 cut(s) 407, 678
BspANI GGCC 6 cut(s) 144, 541, 996, 1038, 1444, 1530
BspCNI CTCAG 2 cut(s) 1012, 1258
BspLI GGNNCC 5 cut(s) 133, 154, 436, 934, 1497
BspMAI CTGCAG 2 cut(s) 622, 1119
BspPI GGATC 6 cut(s) 330, 402, 455, 843, 1339, 1397
BspT107I GGYRCC 1 cut(s) 152
BspTI CTTAAG 1 cut(s) 686
BssECI CCNNGG 7 cut(s) 21, 139, 360, 593, 753, 936, 981
BssMI GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
BssNI GRCGYC 2 cut(s) 153, 1470
BssT1I CCWWGG 1 cut(s) 21
Bst2UI CCWGG 8 cut(s) 59, 150, 594, 761, 814, 938, 952, 1142
Bst4CI ACNGT 3 cut(s) 131, 364, 740
Bst6I CTCTTC 1 cut(s) 1561
BstACI GRCGYC 2 cut(s) 153, 1470
BstAFI CTTAAG 1 cut(s) 686
BstAPI GCANNNNNTGC 1 cut(s) 356
BstBAI YACGTR 1 cut(s) 1465
BstC8I GCNNGC 2 cut(s) 693, 927
BstDEI CTNAG 2 cut(s) 1020, 1245
BstDSI CCRYGG 1 cut(s) 360
BstEII GGTNACC 2 cut(s) 506, 1546
BstF5I GGATG 4 cut(s) 409, 472, 747, 1120
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 1 cut(s) 155
BstKTI GATC 8 cut(s) 325, 397, 450, 579, 838, 1244, 1347, 1405
BstMBI GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
BstNI CCWGG 8 cut(s) 59, 150, 594, 761, 814, 938, 952, 1142
BstNSI RCATGY 2 cut(s) 695, 1168
BstPAI GACNNNNGTC 1 cut(s) 129
BstPI GGTNACC 2 cut(s) 506, 1546
BstSFI CTRYAG 2 cut(s) 618, 1115
BstV1I GCAGC 8 cut(s) 27, 610, 620, 632, 796, 818, 1129, 1132
BstV2I GAAGAC 1 cut(s) 552
BstX2I RGATCY 2 cut(s) 1241, 1402
BstYI RGATCY 2 cut(s) 1241, 1402
BsuRI GGCC 6 cut(s) 144, 541, 996, 1038, 1444, 1530
BtgI CCRYGG 1 cut(s) 360
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 4 cut(s) 409, 472, 747, 1120
BtsI GCAGTG 1 cut(s) 72
BtsIMutI CAGTG 2 cut(s) 72, 450
Cac8I GCNNGC 2 cut(s) 693, 927
CfoI GCGC 1 cut(s) 155
Cfr13I GGNCC 7 cut(s) 18, 55, 131, 143, 520, 757, 1442
CseI GACGC 2 cut(s) 185, 1478
Csp6I GTAC 1 cut(s) 1006
CviAII CATG 9 cut(s) 36, 246, 328, 524, 550, 692, 824, 903, 1165
CviQI GTAC 1 cut(s) 1006
DdeI CTNAG 2 cut(s) 1020, 1245
DinI GGCGCC 1 cut(s) 154
DpnI GATC 8 cut(s) 324, 396, 449, 578, 837, 1243, 1346, 1404
DpnII GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
Eam1104I CTCTTC 1 cut(s) 1561
EarI CTCTTC 1 cut(s) 1561
Eco130I CCWWGG 1 cut(s) 21
Eco32I GATATC 1 cut(s) 243
Eco47I GGWCC 5 cut(s) 18, 55, 131, 520, 757
Eco57I CTGAAG 3 cut(s) 618, 983, 1542
Eco88I CYCGRG 3 cut(s) 752, 982, 1483
Eco91I GGTNACC 2 cut(s) 506, 1546
EcoO65I GGTNACC 2 cut(s) 506, 1546
EcoRII CCWGG 8 cut(s) 57, 148, 592, 759, 812, 936, 950, 1140
EcoRV GATATC 1 cut(s) 243
EcoT14I CCWWGG 1 cut(s) 21
EgeI GGCGCC 1 cut(s) 154
EheI GGCGCC 1 cut(s) 154
ErhI CCWWGG 1 cut(s) 21
FaeI CATG 9 cut(s) 39, 249, 331, 527, 553, 695, 827, 906, 1168
FaqI GGGAC 4 cut(s) 117, 122, 610, 878
FatI CATG 9 cut(s) 35, 245, 327, 523, 549, 691, 823, 902, 1164
Fnu4HI GCNGC 9 cut(s) 41, 609, 621, 624, 678, 807, 810, 1118, 1146
FokI GGATG 4 cut(s) 416, 459, 734, 1107
Fsp4HI GCNGC 9 cut(s) 41, 609, 621, 624, 678, 807, 810, 1118, 1146
FspBI CTAG 3 cut(s) 848, 1239, 1579
GlaI GCGC 1 cut(s) 154
GluI GCNGC 9 cut(s) 41, 609, 621, 624, 678, 807, 810, 1118, 1146
GsaI CCCAGC 2 cut(s) 321, 1352
GsuI CTGGAG 2 cut(s) 132, 576
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 6 cut(s) 144, 541, 996, 1038, 1444, 1530
HapII CCGG 3 cut(s) 141, 555, 1124
HgaI GACGC 2 cut(s) 185, 1478
HhaI GCGC 1 cut(s) 155
Hin1I GRCGYC 2 cut(s) 153, 1470
Hin1II CATG 9 cut(s) 39, 249, 331, 527, 553, 695, 827, 906, 1168
Hin6I GCGC 1 cut(s) 153
HinP1I GCGC 1 cut(s) 153
HindIII AAGCTT 1 cut(s) 923
HinfI GANTC 5 cut(s) 257, 379, 412, 1205, 1270
HpaII CCGG 3 cut(s) 141, 555, 1124
HphI GGTGA 6 cut(s) 421, 518, 1108, 1319, 1540, 1567
Hpy166II GTNNAC 3 cut(s) 896, 1327, 1468
Hpy188I TCNGA 9 cut(s) 118, 175, 213, 267, 1002, 1089, 1179, 1222, 1230
Hpy188III TCNNGA 2 cut(s) 383, 1539
Hpy8I GTNNAC 3 cut(s) 896, 1327, 1468
Hpy99I CGWCG 6 cut(s) 89, 122, 125, 128, 131, 209
HpyAV CCTTC 3 cut(s) 1007, 1370, 1541
HpyCH4III ACNGT 3 cut(s) 131, 364, 740
HpyCH4IV ACGT 3 cut(s) 207, 1323, 1464
HpyCH4V TGCA 6 cut(s) 196, 608, 620, 827, 929, 1117
HpyF3I CTNAG 2 cut(s) 1020, 1245
HpySE526I ACGT 3 cut(s) 207, 1323, 1464
Hsp92I GRCGYC 2 cut(s) 153, 1470
Hsp92II CATG 9 cut(s) 39, 249, 331, 527, 553, 695, 827, 906, 1168
HspAI GCGC 1 cut(s) 153
KasI GGCGCC 1 cut(s) 152
Kzo9I GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
LmnI GCTCC 6 cut(s) 5, 119, 440, 1337, 1427, 1495
Lsp1109I GCAGC 8 cut(s) 27, 610, 620, 632, 796, 818, 1129, 1132
LweI GCATC 7 cut(s) 304, 394, 647, 652, 756, 1129, 1226
MaeI CTAG 3 cut(s) 848, 1239, 1579
MaeII ACGT 3 cut(s) 207, 1323, 1464
MaeIII GTNAC 6 cut(s) 70, 417, 506, 856, 1157, 1546
MalI GATC 8 cut(s) 324, 396, 449, 578, 837, 1243, 1346, 1404
MboI GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
MboII GAAGA 5 cut(s) 193, 557, 579, 1122, 1548
MflI RGATCY 2 cut(s) 1241, 1402
MhlI GDGCHC 3 cut(s) 492, 1432, 1519
MluCI AATT 8 cut(s) 197, 287, 701, 764, 887, 988, 1232, 1252
Mly113I GGCGCC 1 cut(s) 153
MmeI TCCRAC 5 cut(s) 141, 512, 1079, 1276, 1405
MseI TTAA 3 cut(s) 465, 651, 687
MspA1I CMGCKG 4 cut(s) 611, 623, 809, 1019
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 3 cut(s) 141, 555, 1124
Mva1269I GAATGC 1 cut(s) 1114
MvaI CCWGG 8 cut(s) 59, 150, 594, 761, 814, 938, 952, 1142
NarI GGCGCC 1 cut(s) 153
NciI CCSGG 2 cut(s) 141, 556
NdeII GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
NlaIII CATG 9 cut(s) 39, 249, 331, 527, 553, 695, 827, 906, 1168
NlaIV GGNNCC 5 cut(s) 133, 154, 436, 934, 1497
NmuCI GTSAC 5 cut(s) 70, 506, 856, 1157, 1546
NspI RCATGY 2 cut(s) 695, 1168
PaeI GCATGC 1 cut(s) 695
PaeR7I CTCGAG 1 cut(s) 1483
PcsI WCGNNNNNNNCGW 3 cut(s) 90, 132, 368
PctI GAATGC 1 cut(s) 1114
PfeI GAWTC 5 cut(s) 257, 379, 412, 1205, 1270
PfoI TCCNGGA 1 cut(s) 759
PkrI GCNGC 9 cut(s) 42, 610, 622, 625, 679, 808, 811, 1119, 1147
PluTI GGCGCC 1 cut(s) 156
Ppu21I YACGTR 1 cut(s) 1465
PshAI GACNNNNGTC 1 cut(s) 129
Psp6I CCWGG 8 cut(s) 57, 148, 592, 759, 812, 936, 950, 1140
PspEI GGTNACC 2 cut(s) 506, 1546
PspFI CCCAGC 2 cut(s) 317, 1348
PspGI CCWGG 8 cut(s) 57, 148, 592, 759, 812, 936, 950, 1140
PspN4I GGNNCC 5 cut(s) 133, 154, 436, 934, 1497
PspPI GGNCC 7 cut(s) 18, 55, 131, 143, 520, 757, 1442
PspXI VCTCGAGB 1 cut(s) 1483
PstI CTGCAG 2 cut(s) 622, 1119
PsuI RGATCY 2 cut(s) 1241, 1402
PvuII CAGCTG 4 cut(s) 611, 623, 809, 1019
RsaI GTAC 1 cut(s) 1007
RsaNI GTAC 1 cut(s) 1006
SaqAI TTAA 3 cut(s) 465, 651, 687
SatI GCNGC 9 cut(s) 41, 609, 621, 624, 678, 807, 810, 1118, 1146
Sau3AI GATC 8 cut(s) 322, 394, 447, 576, 835, 1241, 1344, 1402
Sau96I GGNCC 7 cut(s) 18, 55, 131, 143, 520, 757, 1442
SduI GDGCHC 3 cut(s) 492, 1432, 1519
SfaNI GCATC 7 cut(s) 304, 394, 647, 652, 756, 1129, 1226
SfcI CTRYAG 2 cut(s) 618, 1115
SfoI GGCGCC 1 cut(s) 154
Sfr274I CTCGAG 1 cut(s) 1483
SinI GGWCC 5 cut(s) 18, 55, 131, 520, 757
SlaI CTCGAG 1 cut(s) 1483
SmlI CTYRAG 5 cut(s) 383, 429, 440, 686, 1483
SmoI CTYRAG 5 cut(s) 383, 429, 440, 686, 1483
SphI GCATGC 1 cut(s) 695
Sse9I AATT 8 cut(s) 197, 287, 701, 764, 887, 988, 1232, 1252
SsiI CCGC 2 cut(s) 407, 678
SspDI GGCGCC 1 cut(s) 152
SspMI CTAG 3 cut(s) 848, 1239, 1579
StyI CCWWGG 1 cut(s) 21
TaaI ACNGT 3 cut(s) 131, 364, 740
TaiI ACGT 3 cut(s) 210, 1326, 1467
TaqI TCGA 4 cut(s) 204, 377, 1343, 1484
TasI AATT 8 cut(s) 197, 287, 701, 764, 887, 988, 1232, 1252
TatI WGTACW 1 cut(s) 1005
TauI GCSGC 1 cut(s) 680
TfiI GAWTC 5 cut(s) 257, 379, 412, 1205, 1270
Tru1I TTAA 3 cut(s) 465, 651, 687
Tru9I TTAA 3 cut(s) 465, 651, 687
TscAI CASTG 2 cut(s) 79, 457
TseFI GTSAC 5 cut(s) 70, 506, 856, 1157, 1546
TseI GCWGC 8 cut(s) 40, 608, 620, 623, 806, 809, 1117, 1145
Tsp45I GTSAC 5 cut(s) 70, 506, 856, 1157, 1546
TspDTI ATGAA 2 cut(s) 344, 1470
TspRI CASTG 2 cut(s) 79, 457
Vha464I CTTAAG 1 cut(s) 686
VpaK11BI GGWCC 5 cut(s) 18, 55, 131, 520, 757
XapI RAATTY 2 cut(s) 764, 1232
XceI RCATGY 2 cut(s) 695, 1168
XhoI CTCGAG 1 cut(s) 1483
XspI CTAG 3 cut(s) 848, 1239, 1579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.