Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001649

Physical Location & Seq

Genomic Coordinates Forward (+)

46741300 .. 46745943

Gene Structure 4644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0315700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGAGCAGCGCCACCACCTCCAGCCTCACATCTCCTCCGCCGGGCCAACTACCCCGTTCGGCTCTACCGCCACCTACCCCCACGCGCCCACCGCCAGCTCCGGCCACAAGCGCCCCAGGACGCGCGGCAGTTACACCTGTGGCCGGTGCGGCCAGCCCAAGAAGGGCCACTCCTGCCACGTCCGCCCCGCCGAGTCTCACCCCGACACTCCCCTCTCCGTCACCCGAACCCCGGCGCTGCCGCCTCCTCCCCCGCCACGTCAGCCCTACTCCAACCTCCGCCGAGCTTTGTCGTTCGACGACGTCGAGAGCTCCGGTTACGGAGATTCCGATGCTCAGGATCCGGATCCGGATCCGGACCTCGATGAGGTGGAGGACACGGAAGTGGATTGGGATAGGGGCTGGGGTGGTCTTCCGGCGAGCTGTCTGTGGGAGATTCTGAGGCGGCTGCCGCCGCCGGGGCTGTTATCGGCTGCGATGGTTTGCAGGGGATGGAGGGAGACGACGAGGAGGTTGTGGAAGGCCGCGGAGGCGCTCAGGCTTAGGGTTCCGGCGAGGGCTCAGGTTCGGTTTGTTCGATTGGTGTTGCACAAATGCCCGAACCTCGTTAGCCTCTCTCTTACAATTGAAAGTGATGTTGATGCAACAATGCTGGAGTGCATTGCATTTTCGTGCCCAAATCTTGAATCTATGGAGATCTATATTTCTGAGAAGGCAACCAATCGAATTACTGGTGATGAACTGAGTCGTTTTGTTGCTGATAGAAGATTACTGAAAAGCCTTAAGATGGAAGGTTGTTCTAATATAGGTGGCTTTGCTCTCTGTTCATCAAGTCTTTTGACACTTTGGCTTTCGGGTCTTCATTCCCTTTCTAAGATGGTTTTCAACTGCCCCAATCTGAAAGAGATTTCTATTGATTTTTCTCGCCAAGGAAATGATAATACTGATCTTACAACAATGGTTGACGGTCTGGGAAGGAATTGTCCAAGGCTGCAAAACATACACATTGCATCAGTCCGGCTTTCACATGCTGTTGTTCTTGCACTTACAGCTGCTCAATTAAGGGATTTGCAAATGCTGTCTCTTGTTCTTGGATCTCAAATCACTGATGCGTCAGTTGCTGCCATAGCTTCTACCTATCCATACTTAGAATTGCTTGATCTGAGCGGATCTAGCATCAGTGACAGTGGCATTCAAATCATTTGCAATGTGTTTCCTGAAACTCTTTCAAGGCTACTTGTTGCTCTTTGTCCCAACATCACTACAATGGGTATAGTATTTGCCACAACTCAACTGCCTCTTCTTGAACTCATGGACTGTGGCATGACGATATGTGATCGCAATTCTTCAGATCCGACCTATGAAGAAAGCAGTGACTTTCAATTATCAATGCCTTCAAAAGCCAAAGCACACCTCATTTGCCAGAATCTGATTATTAAACATGGCCGATTGAAAAAACTCAGCTTGTGGGGCTGTTCTGGCTTAGATGCTCTATCTTTAAGCTGCCCAGAACTCAATGATCTAAACTTAAATTCTTGTAACAACTTGCATCCAGAGAGATTGTCACTTCAGTGCCCAAATTTAGAAAAGGTGCATGCATCAGGTTGTCAACGGATGTTGATCGGAGCCATTCACAGTCAGCTCAACAATAATCTTGCTACTATGGATAGCCTATTACCATGCAAGCGTCTAGCCAGTGGCTCAAAGAGAATACGGGTTCCACATTATATGATGGAACAGAGTTTGCAGTCATATGAGGATGATAAGAAGCGAAGAAGGGTTGAAAAGCGGCGTTGTAATGTGCTTGTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_9

Protein Analysis

604

Amino Acids

66.73

Weight (kDa)

7.96

Isoelectric Point (pI)

57.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	135 - 174	5.3e-07	F-box-like
F-box	PF00646	137 - 171	8.6e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19940 AT1G19940 AT1G19940 AT1G75680
fragaria_vesca	FvH4_1g11950 FvH4_1g11950 FvH4_1g11950 FvH4_1g11950 FvH4_1g11950 FvH4_2g38670
malus_domestica	MD08G1014300.v1.1 MD15G1013700.v1.1 MD15G1246400.v1.1
prunus_persica	Prupe.1G367400_v2.0.a1 Prupe.7G167300_v2.0.a1
pyrus_communis	pycom08g01290 pycom15g01190 pycom15g21680
rosa_chinensis	RchiOBHm_Chr2g0099551 RchiOBHm_Chr2g0099561 RchiOBHm_Chr2g0099571 RchiOBHm_Chr6g0302641
rosa_laevigata	RLG00000011152 RLG00000016892
rosa_multiflora	Rmu_co8327967.1_g000001 Rmu_sc0005120.1_g000001 Rmu_sc0005120.1_g000003 Rmu_sc0005455.1_g000004 Rmu_sc0017900.1_g000011
rosa_roxburghii	Rroxscaffold_2G00142970 Rroxscaffold_7G00165480
rosa_rugosa	Rorug02G0080700 Rorug06G0315700
rosa_samantha	Rh2AG130500 Rh2AG130600 Rh2BG133600 Rh2BG133700 Rh2CG134300 Rh2CG134500 Rh2DG134600 Rh2DG134700 Rh2DG134900 Rh6AG429000 Rh6BG473500 Rh6CG441300 Rh6DG428100
rosa_wichuraiana	Rw2G010070 Rw2G010080 Rw6G037130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	306
AccBSI	CCGCTC	1 cut(s)	1167
AccI	GTMKAC	1 cut(s)	1809
AccII	CGCG	4 cut(s)	86, 124, 126, 527
AccIII	TCCGGA	3 cut(s)	343, 349, 355
AclWI	GGATC	9 cut(s)	335, 341, 347, 348, 354, 360, 1102, 1177, 1346
AcoI	YGGCCR	4 cut(s)	103, 142, 151, 1444
AcsI	RAATTY	2 cut(s)	1531, 1579
AcuI	CTGAAG	2 cut(s)	1332, 1553
AcyI	GRCGYC	1 cut(s)	303
AfiI	CCNNNNNNNGG	7 cut(s)	42, 144, 164, 232, 367, 458, 787
AflII	CTTAAG	1 cut(s)	782
AjiI	CACGTC	2 cut(s)	181, 260
AjnI	CCWGG	1 cut(s)	116
AleI	CACNNNNGTG	2 cut(s)	383, 1570
AluBI	AGCT	9 cut(s)	99, 287, 312, 423, 1052, 1130, 1464, 1503, 1642
AluI	AGCT	9 cut(s)	99, 287, 312, 423, 1052, 1130, 1464, 1503, 1642
Alw21I	GWGCWC	1 cut(s)	314
Alw26I	GTCTC	3 cut(s)	201, 494, 1086
AlwI	GGATC	9 cut(s)	335, 341, 347, 348, 354, 360, 1102, 1177, 1346
AlwNI	CAGNNNCTG	2 cut(s)	1121, 1429
Aor13HI	TCCGGA	3 cut(s)	343, 349, 355
AoxI	GGCC	7 cut(s)	44, 103, 142, 151, 166, 522, 1444
ApeKI	GCWGC	8 cut(s)	7, 238, 448, 473, 991, 1052, 1121, 1503
ApoI	RAATTY	2 cut(s)	1531, 1579
AspLEI	GCGC	6 cut(s)	12, 88, 114, 126, 238, 535
AspS9I	GGNCC	3 cut(s)	44, 166, 358
AsuC2I	CCSGG	3 cut(s)	43, 233, 459
AsuHPI	GGTGA	3 cut(s)	191, 214, 746
AvaII	GGWCC	1 cut(s)	358
BaeGI	GKGCMC	2 cut(s)	677, 1577
BamHI	GGATCC	3 cut(s)	340, 346, 352
BanII	GRGCYC	2 cut(s)	314, 562
BbsI	GAAGAC	2 cut(s)	404, 851
Bbv12I	GWGCWC	1 cut(s)	314
BbvI	GCAGC	8 cut(s)	19, 225, 435, 460, 978, 1039, 1108, 1490
BccI	CCATC	5 cut(s)	472, 486, 781, 871, 1726
BciT130I	CCWGG	1 cut(s)	118
BcnI	CCSGG	3 cut(s)	43, 233, 459
BcoDI	GTCTC	3 cut(s)	201, 494, 1086
BfaI	CTAG	2 cut(s)	1173, 1691
BfoI	RGCGCY	4 cut(s)	13, 115, 239, 536
BfrI	CTTAAG	1 cut(s)	782
BglI	GCCNNNNNGGC	3 cut(s)	150, 460, 530
BglII	AGATCT	1 cut(s)	696
Bme1390I	CCNGG	4 cut(s)	43, 118, 233, 459
Bme18I	GGWCC	1 cut(s)	358
BmgBI	CACGTC	2 cut(s)	181, 260
BmgT120I	GGNCC	3 cut(s)	44, 166, 358
BmiI	GGNNCC	6 cut(s)	342, 348, 354, 549, 1627, 1719
BmrFI	CCNGG	4 cut(s)	43, 118, 233, 459
BmsI	GCATC	8 cut(s)	322, 631, 1019, 1099, 1185, 1477, 1558, 1607
BpiI	GAAGAC	2 cut(s)	404, 851
BpmI	CTGGAG	2 cut(s)	5, 674
Bpu10I	CCTNAGC	4 cut(s)	336, 536, 542, 561
BpuMI	CCSGG	3 cut(s)	43, 233, 459
BsaBI	GATNNNNATC	3 cut(s)	345, 351, 1619
BsaHI	GRCGYC	1 cut(s)	303
BsaJI	CCNNGG	6 cut(s)	116, 231, 458, 525, 928, 986
BsaWI	WCCGGW	4 cut(s)	314, 343, 349, 355
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	7 cut(s)	42, 144, 164, 232, 367, 458, 787
Bse118I	RCCGGY	1 cut(s)	144
Bse1I	ACTGG	2 cut(s)	736, 1695
Bse3DI	GCAATG	3 cut(s)	660, 1005, 1213
Bse8I	GATNNNNATC	3 cut(s)	345, 351, 1619
BseAI	TCCGGA	3 cut(s)	343, 349, 355
BseBI	CCWGG	1 cut(s)	118
BseDI	CCNNGG	6 cut(s)	116, 231, 458, 525, 928, 986
BseGI	GGATG	4 cut(s)	497, 1549, 1620, 1765
BseJI	GATNNNNATC	3 cut(s)	345, 351, 1619
BseLI	CCNNNNNNNGG	7 cut(s)	42, 144, 164, 232, 367, 458, 787
BseMI	GCAATG	3 cut(s)	660, 1005, 1213
BseMII	CTCAG	8 cut(s)	350, 431, 550, 575, 699, 734, 1154, 1474
BseNI	ACTGG	2 cut(s)	736, 1695
BseRI	GAGGAG	3 cut(s)	25, 237, 523
BseSI	GKGCMC	2 cut(s)	677, 1577
BseXI	GCAGC	8 cut(s)	19, 225, 435, 460, 978, 1039, 1108, 1490
BseYI	CCCAGC	1 cut(s)	402
Bsh1236I	CGCG	4 cut(s)	86, 124, 126, 527
BshFI	GGCC	7 cut(s)	46, 105, 144, 153, 168, 524, 1446
BsiHKAI	GWGCWC	1 cut(s)	314
BslFI	GGGAC	1 cut(s)	1236
BslI	CCNNNNNNNGG	7 cut(s)	42, 144, 164, 232, 367, 458, 787
BsmAI	GTCTC	3 cut(s)	201, 494, 1086
BsmBI	CGTCTC	1 cut(s)	494
BsmFI	GGGAC	1 cut(s)	1236
BsmI	GAATGC	1 cut(s)	1191
BsnI	GGCC	7 cut(s)	46, 105, 144, 153, 168, 524, 1446
Bsp1286I	GDGCHC	4 cut(s)	314, 562, 677, 1577
Bsp13I	TCCGGA	3 cut(s)	343, 349, 355
BspANI	GGCC	7 cut(s)	46, 105, 144, 153, 168, 524, 1446
BspCNI	CTCAG	8 cut(s)	349, 432, 549, 574, 700, 735, 1155, 1473
BspEI	TCCGGA	3 cut(s)	343, 349, 355
BspFNI	CGCG	4 cut(s)	86, 124, 126, 527
BspLI	GGNNCC	6 cut(s)	342, 348, 354, 549, 1627, 1719
BspPI	GGATC	9 cut(s)	335, 341, 347, 348, 354, 360, 1102, 1177, 1346
BspTI	CTTAAG	1 cut(s)	782
BsrBI	CCGCTC	1 cut(s)	1167
BsrDI	GCAATG	3 cut(s)	660, 1005, 1213
BsrFI	RCCGGY	1 cut(s)	144
BsrI	ACTGG	2 cut(s)	736, 1695
BssAI	RCCGGY	1 cut(s)	144
BssECI	CCNNGG	6 cut(s)	116, 231, 458, 525, 928, 986
BssNI	GRCGYC	1 cut(s)	303
BssT1I	CCWWGG	2 cut(s)	928, 986
Bst2UI	CCWGG	1 cut(s)	118
Bst4CI	ACNGT	4 cut(s)	968, 1187, 1319, 1637
Bst6I	CTCTTC	1 cut(s)	1305
BstACI	GRCGYC	1 cut(s)	303
BstAFI	CTTAAG	1 cut(s)	782
BstC8I	GCNNGC	5 cut(s)	97, 155, 421, 1596, 1685
BstDSI	CCRYGG	1 cut(s)	525
BstENI	CCTNNNNNAGG	1 cut(s)	365
BstF5I	GGATG	4 cut(s)	497, 1549, 1620, 1765
BstFNI	CGCG	4 cut(s)	86, 124, 126, 527
BstH2I	RGCGCY	4 cut(s)	13, 115, 239, 536
BstHHI	GCGC	6 cut(s)	12, 88, 114, 126, 238, 535
BstMAI	GTCTC	3 cut(s)	201, 494, 1086
BstNI	CCWGG	1 cut(s)	118
BstNSI	RCATGY	2 cut(s)	1031, 1598
BstSCI	CCNGG	4 cut(s)	41, 116, 231, 457
BstSLI	GKGCMC	2 cut(s)	677, 1577
BstUI	CGCG	4 cut(s)	86, 124, 126, 527
BstV1I	GCAGC	8 cut(s)	19, 225, 435, 460, 978, 1039, 1108, 1490
BstV2I	GAAGAC	2 cut(s)	404, 851
BstX2I	RGATCY	7 cut(s)	340, 346, 352, 696, 1094, 1169, 1351
BstYI	RGATCY	7 cut(s)	340, 346, 352, 696, 1094, 1169, 1351
BsuRI	GGCC	7 cut(s)	46, 105, 144, 153, 168, 524, 1446
BtgI	CCRYGG	1 cut(s)	525
BtgZI	GCGATG	1 cut(s)	491
BtrI	CACGTC	2 cut(s)	181, 260
BtsCI	GGATG	4 cut(s)	497, 1549, 1620, 1765
BtsI	GCAGTG	1 cut(s)	1378
BtsIMutI	CAGTG	6 cut(s)	1104, 1186, 1192, 1378, 1577, 1702
Cac8I	GCNNGC	5 cut(s)	97, 155, 421, 1596, 1685
CaiI	CAGNNNCTG	2 cut(s)	1121, 1429
CfoI	GCGC	6 cut(s)	12, 88, 114, 126, 238, 535
Cfr10I	RCCGGY	1 cut(s)	144
Cfr13I	GGNCC	3 cut(s)	44, 166, 358
Cfr42I	CCGCGG	1 cut(s)	528
CseI	GACGC	3 cut(s)	130, 1101, 1676
CviAII	CATG	6 cut(s)	1028, 1312, 1324, 1442, 1595, 1680
EaeI	YGGCCR	4 cut(s)	103, 142, 151, 1444
Eam1104I	CTCTTC	1 cut(s)	1305
EarI	CTCTTC	1 cut(s)	1305
EciI	GGCGGA	3 cut(s)	28, 173, 269
Ecl136II	GAGCTC	1 cut(s)	312
Eco130I	CCWWGG	2 cut(s)	928, 986
Eco24I	GRGCYC	2 cut(s)	314, 562
Eco47I	GGWCC	1 cut(s)	358
Eco53kI	GAGCTC	1 cut(s)	312
Eco57I	CTGAAG	2 cut(s)	1332, 1553
EcoICRI	GAGCTC	1 cut(s)	312
EcoNI	CCTNNNNNAGG	1 cut(s)	365
EcoRII	CCWGG	1 cut(s)	116
EcoT14I	CCWWGG	2 cut(s)	928, 986
EcoT22I	ATGCAT	1 cut(s)	1600
EcoT38I	GRGCYC	2 cut(s)	314, 562
ErhI	CCWWGG	2 cut(s)	928, 986
Esp3I	CGTCTC	1 cut(s)	494
FaeI	CATG	6 cut(s)	1031, 1315, 1327, 1445, 1598, 1683
FaqI	GGGAC	1 cut(s)	1236
FatI	CATG	6 cut(s)	1027, 1311, 1323, 1441, 1594, 1679
FauI	CCCGC	2 cut(s)	196, 261
FauNDI	CATATG	1 cut(s)	1753
FblI	GTMKAC	1 cut(s)	1809
FokI	GGATG	4 cut(s)	504, 1536, 1627, 1772
FriOI	GRGCYC	2 cut(s)	314, 562
FspBI	CTAG	2 cut(s)	1173, 1691
GlaI	GCGC	6 cut(s)	11, 87, 113, 125, 237, 534
GsaI	CCCAGC	1 cut(s)	406
GsuI	CTGGAG	2 cut(s)	5, 674
HaeII	RGCGCY	4 cut(s)	13, 115, 239, 536
HaeIII	GGCC	7 cut(s)	46, 105, 144, 153, 168, 524, 1446
HgaI	GACGC	3 cut(s)	130, 1101, 1676
HhaI	GCGC	6 cut(s)	12, 88, 114, 126, 238, 535
Hin1I	GRCGYC	1 cut(s)	303
Hin1II	CATG	6 cut(s)	1031, 1315, 1327, 1445, 1598, 1683
Hin6I	GCGC	6 cut(s)	10, 86, 112, 124, 236, 533
HinP1I	GCGC	6 cut(s)	10, 86, 112, 124, 236, 533
HincII	GTYRAC	2 cut(s)	964, 1610
HindII	GTYRAC	2 cut(s)	964, 1610
HinfI	GANTC	6 cut(s)	194, 326, 436, 686, 745, 1426
HphI	GGTGA	3 cut(s)	191, 214, 746
Hpy166II	GTNNAC	3 cut(s)	964, 1610, 1810
Hpy188I	TCNGA	9 cut(s)	331, 441, 709, 900, 1164, 1351, 1356, 1431, 1625
Hpy188III	TCNNGA	9 cut(s)	307, 338, 344, 350, 356, 683, 1217, 1304, 1553
Hpy8I	GTNNAC	3 cut(s)	964, 1610, 1810
Hpy99I	CGWCG	4 cut(s)	302, 305, 308, 508
HpyAV	CCTTC	7 cut(s)	157, 514, 706, 785, 969, 1404, 1770
HpyCH4III	ACNGT	4 cut(s)	968, 1187, 1319, 1637
HpyCH4IV	ACGT	3 cut(s)	180, 259, 303
HpySE526I	ACGT	3 cut(s)	180, 259, 303
Hsp92I	GRCGYC	1 cut(s)	303
Hsp92II	CATG	6 cut(s)	1031, 1315, 1327, 1445, 1598, 1683
HspAI	GCGC	6 cut(s)	10, 86, 112, 124, 236, 533
Kpn2I	TCCGGA	3 cut(s)	343, 349, 355
KspI	CCGCGG	1 cut(s)	528
LmnI	GCTCC	4 cut(s)	4, 104, 317, 1625
Lsp1109I	GCAGC	8 cut(s)	19, 225, 435, 460, 978, 1039, 1108, 1490
LweI	GCATC	8 cut(s)	322, 631, 1019, 1099, 1185, 1477, 1558, 1607
MaeI	CTAG	2 cut(s)	1173, 1691
MaeII	ACGT	3 cut(s)	180, 259, 303
MaeIII	GTNAC	7 cut(s)	131, 220, 317, 1181, 1373, 1538, 1563
MbiI	CCGCTC	1 cut(s)	1167
MboII	GAAGA	7 cut(s)	404, 777, 851, 1292, 1338, 1376, 1785
MfeI	CAATTG	1 cut(s)	624
MflI	RGATCY	7 cut(s)	340, 346, 352, 696, 1094, 1169, 1351
MhlI	GDGCHC	4 cut(s)	314, 562, 677, 1577
MluCI	AATT	9 cut(s)	624, 726, 979, 1058, 1151, 1342, 1382, 1531, 1579
MlyI	GAGTC	2 cut(s)	203, 754
MmeI	TCCRAC	2 cut(s)	297, 1379
Mph1103I	ATGCAT	1 cut(s)	1600
MroI	TCCGGA	3 cut(s)	343, 349, 355
MseI	TTAA	5 cut(s)	783, 1061, 1437, 1499, 1529
MslI	CAYNNNNRTG	4 cut(s)	383, 670, 1265, 1570
MspA1I	CMGCKG	2 cut(s)	527, 1052
MspCI	CTTAAG	1 cut(s)	782
MspR9I	CCNGG	4 cut(s)	43, 118, 233, 459
MunI	CAATTG	1 cut(s)	624
Mva1269I	GAATGC	1 cut(s)	1191
MvaI	CCWGG	1 cut(s)	118
MvnI	CGCG	4 cut(s)	86, 124, 126, 527
NciI	CCSGG	3 cut(s)	43, 233, 459
NdeI	CATATG	1 cut(s)	1753
NlaIII	CATG	6 cut(s)	1031, 1315, 1327, 1445, 1598, 1683
NlaIV	GGNNCC	6 cut(s)	342, 348, 354, 549, 1627, 1719
NmeAIII	GCCGAG	2 cut(s)	217, 308
NmuCI	GTSAC	4 cut(s)	220, 1181, 1373, 1563
NsiI	ATGCAT	1 cut(s)	1600
NspI	RCATGY	2 cut(s)	1031, 1598
OliI	CACNNNNGTG	2 cut(s)	383, 1570
PaeI	GCATGC	1 cut(s)	1598
PcsI	WCGNNNNNNNCGW	3 cut(s)	303, 327, 574
PctI	GAATGC	1 cut(s)	1191
PfeI	GAWTC	4 cut(s)	326, 436, 686, 1426
PflFI	GACNNNGTC	1 cut(s)	302
PleI	GAGTC	2 cut(s)	202, 753
PpsI	GAGTC	2 cut(s)	202, 753
Psp124BI	GAGCTC	1 cut(s)	314
Psp6I	CCWGG	1 cut(s)	116
PspFI	CCCAGC	1 cut(s)	402
PspGI	CCWGG	1 cut(s)	116
PspN4I	GGNNCC	6 cut(s)	342, 348, 354, 549, 1627, 1719
PspPI	GGNCC	3 cut(s)	44, 166, 358
PstNI	CAGNNNCTG	2 cut(s)	1121, 1429
PsuI	RGATCY	7 cut(s)	340, 346, 352, 696, 1094, 1169, 1351
PsyI	GACNNNGTC	1 cut(s)	302
PvuII	CAGCTG	1 cut(s)	1052
RseI	CAYNNNNRTG	4 cut(s)	383, 670, 1265, 1570
SacI	GAGCTC	1 cut(s)	314
SacII	CCGCGG	1 cut(s)	528
SaqAI	TTAA	5 cut(s)	783, 1061, 1437, 1499, 1529
Sau96I	GGNCC	3 cut(s)	44, 166, 358
SchI	GAGTC	2 cut(s)	203, 754
ScrFI	CCNGG	4 cut(s)	43, 118, 233, 459
SduI	GDGCHC	4 cut(s)	314, 562, 677, 1577
SfaNI	GCATC	8 cut(s)	322, 631, 1019, 1099, 1185, 1477, 1558, 1607
SfiI	GGCCNNNNNGGCC	1 cut(s)	150
Sfr303I	CCGCGG	1 cut(s)	528
SgrBI	CCGCGG	1 cut(s)	528
SinI	GGWCC	1 cut(s)	358
SmiMI	CAYNNNNRTG	4 cut(s)	383, 670, 1265, 1570
SmlI	CTYRAG	1 cut(s)	782
SmoI	CTYRAG	1 cut(s)	782
SphI	GCATGC	1 cut(s)	1598
Sse9I	AATT	9 cut(s)	624, 726, 979, 1058, 1151, 1342, 1382, 1531, 1579
SspMI	CTAG	2 cut(s)	1173, 1691
SstI	GAGCTC	1 cut(s)	314
StyD4I	CCNGG	4 cut(s)	41, 116, 231, 457
StyI	CCWWGG	2 cut(s)	928, 986
TaaI	ACNGT	4 cut(s)	968, 1187, 1319, 1637
TaiI	ACGT	3 cut(s)	183, 262, 306
TaqI	TCGA	5 cut(s)	297, 306, 363, 577, 724
TasI	AATT	9 cut(s)	624, 726, 979, 1058, 1151, 1342, 1382, 1531, 1579
TauI	GCSGC	8 cut(s)	129, 153, 244, 448, 454, 457, 527, 1792
TfiI	GAWTC	4 cut(s)	326, 436, 686, 1426
Tru1I	TTAA	5 cut(s)	783, 1061, 1437, 1499, 1529
Tru9I	TTAA	5 cut(s)	783, 1061, 1437, 1499, 1529
TscAI	CASTG	6 cut(s)	1111, 1186, 1192, 1378, 1577, 1702
TseFI	GTSAC	4 cut(s)	220, 1181, 1373, 1563
TseI	GCWGC	8 cut(s)	7, 238, 448, 473, 991, 1052, 1121, 1503
Tsp45I	GTSAC	4 cut(s)	220, 1181, 1373, 1563
TspDTI	ATGAA	4 cut(s)	753, 816, 851, 1377
TspGWI	ACGGA	4 cut(s)	208, 336, 395, 1627
TspRI	CASTG	6 cut(s)	1111, 1186, 1192, 1378, 1577, 1702
Tth111I	GACNNNGTC	1 cut(s)	302
Vha464I	CTTAAG	1 cut(s)	782
VpaK11BI	GGWCC	1 cut(s)	358
XagI	CCTNNNNNAGG	1 cut(s)	365
XapI	RAATTY	2 cut(s)	1531, 1579
XceI	RCATGY	2 cut(s)	1031, 1598
XmiI	GTMKAC	1 cut(s)	1809
XspI	CTAG	2 cut(s)	1173, 1691
ZraI	GACGTC	1 cut(s)	304
Zsp2I	ATGCAT	1 cut(s)	1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.