Prupe.7G167300_v2.0.a1

Belongs to the glycosyl hydrolase 9 (cellulase E) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
17063642 .. 17066760
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G167300.1

Sequence Viewer

Length: 1602 bp
ATGGAAGAGAGAGCTGAGAAAGCTGCTCAGAAAGGGTCAAAGACAGAGAGATGGTGCTGGCGGTTAATTCTGTTAGTAACTGTATCTCTGGTTGCCACTATGGCTGCACTCACTCTCTTGAAGTATTTCAAGCACTCCAATTCAAGTCGTGTCTCGGGTCGCCCCGGCCCCGTAGTGCAAAAATACTCAGAAGCTCTTCAACTCTCCATGCAGTTCTTTGATATCCAGAAATCTGGTAAGCTTGTGGATAATCCGATTCCATGGAGAGGGGATTCGGGGCTCCAAGATGGGAGTGAGGAGGATTTGGATTTGTCAAAAGGACTGTATGATGCAGGGGACCTCATCAAGTTTGGGTTCCCCATGGCTTTTACGGCGACTGTGTTGTCTTGGGGAATTCTTGAATATGGAGATCAGATGAAAGCGGTGAAGCAATTGGATCATGCCCATGACTCGCTTAAATGGATCACTGATTACCTTATCAATGCACATCCTTCTCCCAATGAGCTCTATATTCAGGTGGGTGATCCTGACTTGGACCACAAGTGTTGGCAGAGACCTGAAGTCATGACAGAGGAAAGGCCTCTGATTCAAATTAACACATCTTTCCCAGGAACAGATGTTGCAGCAGAAACTGCAGCAGCTATGGCATCAGCATCTCTGGTTTTCAGGAAAATCAACTCCTCTTATTCTAAGTTGCTCCTCATGCATGCCCAGCAGCTGTTTGCTTTTGCTGATACTTACAGAGGTTCTTATAGTGTAAGCATACCCCAAGTGCAGATTTACTACAACTCAACGGGATATGGAGATGAACTCTTGTGGGCAGCTACCTGGCTCTATCATGCCACTGGAGACTTGACATACTTCAAATATGCAACCGAACAGAACGGCCCGGCATTTGCTAACTGGGGAAGTCCATCTTGGTTTAGTTGGGACGACAAGCATGCTGCTACTCAGGTTCTACTGTCCAGGATAAGTTTCTTTGGTACAAAAGACATCTCATTTGCAGAGAACATGGACCTTCAAAAGTACAGAGAAACTGCAGAGGTCTTCATGTGTGGACTTCTACCTGATTCGCCCACGGCCACATCCAGCAGAACAGCCAGTGGTCTGATATGGGTGATAAAATGGAACTGTCTGCAGCATGCTGTGGCTTCAGCATTTCTAGCCGTTCTCTATAGTGACTACATGCTTACATCTCAGACTGAAGTGCTGTATTGTGATGGGAAATTCTACAAGCCTACCGATCTTCGTAACTTTGCCATCTCTCAGGTAGATTATGTGTTGGGCGAAAATCCAATGGCGATGAGCTATCTTGTTGGGTATGGGAGCAAGTACCCTCAGTATGTGCACCACAGGGGATCTTCAATTCCAGCTGATGCACATACCGGCTGCCAGGACGGGTTTAAGTGGCTGAACTCTTCCAATCCCAATCCAAATGTAGCTGTTGGTGCTCTAGTTGGAGGCCCCTTCCTGAATGAAACCTATATCGATAACCGGAACAATTCGATGCAAGGTGAACCAAGCACTTACAATAGTGCACTCATTGTGGCCCTCCTCTCAGGCTTAGTTACCAGTTCTTCAGTTCCCAAGACTTTCTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

534

Amino Acids

59.3

Weight (kDa)

5.58

Isoelectric Point (pI)

31.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 382
AciI CCGC 2 cut(s) 61, 422
AclWI GGATC 4 cut(s) 444, 470, 518, 1366
AcoI YGGCCR 1 cut(s) 1080
AcsI RAATTY 2 cut(s) 393, 1226
AcuI CTGAAG 4 cut(s) 579, 1137, 1224, 1563
AfaI GTAC 3 cut(s) 985, 1028, 1334
AfiI CCNNNNNNNGG 1 cut(s) 266
AgsI TTSAA 9 cut(s) 121, 130, 144, 200, 401, 590, 865, 1022, 1365
AhdI GACNNNNNGTC 1 cut(s) 560
AjnI CCWGG 4 cut(s) 607, 827, 965, 1392
AjuI GAANNNNNNNTTGG 2 cut(s) 901, 933
Alw21I GWGCWC 4 cut(s) 507, 1350, 1453, 1540
Alw26I GTCTC 3 cut(s) 157, 547, 843
Alw44I GTGCAC 2 cut(s) 1346, 1536
AlwI GGATC 4 cut(s) 444, 470, 518, 1366
AlwNI CAGNNNCTG 2 cut(s) 632, 718
Ama87I CYCGRG 1 cut(s) 154
AoxI GGCC 6 cut(s) 166, 578, 886, 1080, 1462, 1548
ApaLI GTGCAC 2 cut(s) 1346, 1536
ApoI RAATTY 2 cut(s) 393, 1226
ArsI GACNNNNNNTTYG 2 cut(s) 983, 1015
Asp700I GAANNNNTTC 2 cut(s) 125, 195
AspS9I GGNCC 7 cut(s) 167, 337, 535, 887, 1015, 1463, 1549
AsuC2I CCSGG 2 cut(s) 165, 890
AsuHPI GGTGA 4 cut(s) 436, 533, 1129, 1526
AvaI CYCGRG 1 cut(s) 154
AvaII GGWCC 3 cut(s) 337, 535, 1015
BaeGI GKGCMC 2 cut(s) 1350, 1540
BanII GRGCYC 2 cut(s) 282, 507
BbsI GAAGAC 1 cut(s) 1039
Bbv12I GWGCWC 4 cut(s) 507, 1350, 1453, 1540
BccI CCATC 5 cut(s) 45, 281, 922, 1214, 1268
BceAI ACGGC 4 cut(s) 387, 901, 1095, 1151
BcgI CGANNNNNNTGC 2 cut(s) 923, 957
BciT130I CCWGG 4 cut(s) 609, 829, 967, 1394
BcnI CCSGG 2 cut(s) 165, 890
BcoDI GTCTC 3 cut(s) 157, 547, 843
BfaI CTAG 2 cut(s) 1163, 1454
BfmI CTRYAG 4 cut(s) 633, 1038, 1136, 1174
BglI GCCNNNNNGGC 1 cut(s) 101
Bme1390I CCNGG 6 cut(s) 165, 609, 829, 890, 967, 1394
Bme18I GGWCC 3 cut(s) 337, 535, 1015
BmeRI GACNNNNNGTC 1 cut(s) 560
BmeT110I CYCGRG 1 cut(s) 154
BmgT120I GGNCC 7 cut(s) 167, 337, 535, 887, 1015, 1463, 1549
BmiI GGNNCC 5 cut(s) 169, 281, 338, 356, 1465
BmrFI CCNGG 6 cut(s) 165, 609, 829, 890, 967, 1394
BmrI ACTGGG 1 cut(s) 913
BmsI GCATC 5 cut(s) 319, 656, 662, 1366, 1497
BmuI ACTGGG 1 cut(s) 913
BpiI GAAGAC 1 cut(s) 1039
BplI GAGNNNNNCTC 2 cut(s) 795, 827
BpmI CTGGAG 1 cut(s) 867
BpuMI CCSGG 2 cut(s) 165, 890
Bsa29I ATCGAT 1 cut(s) 1488
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 5 cut(s) 163, 260, 360, 607, 1077
BsaWI WCCGGW 1 cut(s) 1494
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse118I RCCGGY 1 cut(s) 1385
Bse1I ACTGG 4 cut(s) 850, 908, 1101, 1572
BseBI CCWGG 4 cut(s) 609, 829, 967, 1394
BseCI ATCGAT 1 cut(s) 1488
BseDI CCNNGG 5 cut(s) 163, 260, 360, 607, 1077
BseGI GGATG 2 cut(s) 487, 1085
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMII CTCAG 8 cut(s) 6, 41, 201, 965, 1211, 1280, 1352, 1572
BseNI ACTGG 4 cut(s) 850, 908, 1101, 1572
BseRI GAGGAG 4 cut(s) 311, 670, 689, 1544
BseSI GKGCMC 2 cut(s) 1350, 1540
BseYI CCCAGC 1 cut(s) 711
BsgI GTGCAG 2 cut(s) 90, 794
BshFI GGCC 6 cut(s) 168, 580, 888, 1082, 1464, 1550
BshVI ATCGAT 1 cut(s) 1488
BsiHKAI GWGCWC 4 cut(s) 507, 1350, 1453, 1540
BsiHKCI CYCGRG 1 cut(s) 154
BsiSI CCGG 4 cut(s) 165, 890, 1386, 1495
BslFI GGGAC 2 cut(s) 350, 944
BslI CCNNNNNNNGG 1 cut(s) 266
BsmAI GTCTC 3 cut(s) 157, 547, 843
BsmFI GGGAC 2 cut(s) 350, 944
BsnI GGCC 6 cut(s) 168, 580, 888, 1082, 1464, 1550
Bso31I GGTCTC 1 cut(s) 547
BsoBI CYCGRG 1 cut(s) 154
Bsp1286I GDGCHC 5 cut(s) 282, 507, 1350, 1453, 1540
Bsp143I GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
Bsp19I CCATGG 2 cut(s) 260, 360
BspACI CCGC 2 cut(s) 61, 422
BspANI GGCC 6 cut(s) 168, 580, 888, 1082, 1464, 1550
BspCNI CTCAG 8 cut(s) 7, 40, 200, 964, 1210, 1279, 1351, 1571
BspDI ATCGAT 1 cut(s) 1488
BspHI TCATGA 1 cut(s) 564
BspLI GGNNCC 5 cut(s) 169, 281, 338, 356, 1465
BspMAI CTGCAG 3 cut(s) 637, 1042, 1140
BspPI GGATC 4 cut(s) 444, 470, 518, 1366
BspQI GCTCTTC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 547
BsrFI RCCGGY 1 cut(s) 1385
BsrI ACTGG 4 cut(s) 850, 908, 1101, 1572
BssAI RCCGGY 1 cut(s) 1385
BssECI CCNNGG 5 cut(s) 163, 260, 360, 607, 1077
BssMI GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
BssT1I CCWWGG 2 cut(s) 260, 360
Bst2UI CCWGG 4 cut(s) 609, 829, 967, 1394
Bst4CI ACNGT 5 cut(s) 82, 324, 379, 963, 1133
Bst6I CTCTTC 2 cut(s) 201, 1423
BstAPI GCANNNNNTGC 1 cut(s) 632
BstC8I GCNNGC 4 cut(s) 59, 708, 942, 1143
BstDSI CCRYGG 3 cut(s) 260, 360, 1077
BstF5I GGATG 2 cut(s) 487, 1085
BstKTI GATC 6 cut(s) 412, 439, 465, 526, 1246, 1361
BstMAI GTCTC 3 cut(s) 157, 547, 843
BstMBI GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
BstMWI GCNNNNNNNGC 9 cut(s) 20, 101, 371, 632, 644, 703, 712, 1163, 1448
BstNI CCWGG 4 cut(s) 609, 829, 967, 1394
BstNSI RCATGY 4 cut(s) 710, 944, 1145, 1189
BstSCI CCNGG 6 cut(s) 163, 607, 827, 888, 965, 1392
BstSFI CTRYAG 4 cut(s) 633, 1038, 1136, 1174
BstSLI GKGCMC 2 cut(s) 1350, 1540
BstV2I GAAGAC 1 cut(s) 1039
BstX2I RGATCY 1 cut(s) 1358
BstXI CCANNNNNNTGG 1 cut(s) 233
BstYI RGATCY 1 cut(s) 1358
Bsu15I ATCGAT 1 cut(s) 1488
BsuRI GGCC 6 cut(s) 168, 580, 888, 1082, 1464, 1550
BsuTUI ATCGAT 1 cut(s) 1488
BtgI CCRYGG 3 cut(s) 260, 360, 1077
BtgZI GCGATG 1 cut(s) 1316
BtsCI GGATG 2 cut(s) 487, 1085
BtsIMutI CAGTG 3 cut(s) 465, 843, 1108
Cac8I GCNNGC 4 cut(s) 59, 708, 942, 1143
CaiI CAGNNNCTG 2 cut(s) 632, 718
CciI TCATGA 1 cut(s) 564
Cfr10I RCCGGY 1 cut(s) 1385
Cfr13I GGNCC 7 cut(s) 167, 337, 535, 887, 1015, 1463, 1549
ClaI ATCGAT 1 cut(s) 1488
Csp6I GTAC 3 cut(s) 984, 1027, 1333
CspCI CAANNNNNGTGG 2 cut(s) 527, 562
CviQI GTAC 3 cut(s) 984, 1027, 1333
DpnI GATC 6 cut(s) 411, 438, 464, 525, 1245, 1360
DpnII GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
DrdI GACNNNNNNGTC 1 cut(s) 382
DriI GACNNNNNGTC 1 cut(s) 560
DseDI GACNNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 1 cut(s) 1080
Eam1104I CTCTTC 2 cut(s) 201, 1423
Eam1105I GACNNNNNGTC 1 cut(s) 560
EarI CTCTTC 2 cut(s) 201, 1423
Ecl136II GAGCTC 1 cut(s) 505
Eco130I CCWWGG 2 cut(s) 260, 360
Eco147I AGGCCT 1 cut(s) 580
Eco24I GRGCYC 2 cut(s) 282, 507
Eco31I GGTCTC 1 cut(s) 547
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 3 cut(s) 337, 535, 1015
Eco53kI GAGCTC 1 cut(s) 505
Eco57I CTGAAG 4 cut(s) 579, 1137, 1224, 1563
Eco88I CYCGRG 1 cut(s) 154
EcoICRI GAGCTC 1 cut(s) 505
EcoO109I RGGNCCY 2 cut(s) 337, 1463
EcoRI GAATTC 1 cut(s) 393
EcoRII CCWGG 4 cut(s) 607, 827, 965, 1392
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 2 cut(s) 260, 360
EcoT22I ATGCAT 1 cut(s) 708
EcoT38I GRGCYC 2 cut(s) 282, 507
ErhI CCWWGG 2 cut(s) 260, 360
FalI AAGNNNNNCTT 2 cut(s) 901, 933
FaqI GGGAC 2 cut(s) 350, 944
FokI GGATG 2 cut(s) 474, 1072
FriOI GRGCYC 2 cut(s) 282, 507
FspBI CTAG 2 cut(s) 1163, 1454
GsaI CCCAGC 1 cut(s) 715
GsuI CTGGAG 1 cut(s) 867
HaeIII GGCC 6 cut(s) 168, 580, 888, 1082, 1464, 1550
HapII CCGG 4 cut(s) 165, 890, 1386, 1495
HindIII AAGCTT 1 cut(s) 239
HinfI GANTC 5 cut(s) 256, 272, 449, 586, 1070
HpaII CCGG 4 cut(s) 165, 890, 1386, 1495
HphI GGTGA 4 cut(s) 436, 533, 1129, 1526
Hpy166II GTNNAC 4 cut(s) 1058, 1348, 1517, 1538
Hpy188I TCNGA 7 cut(s) 30, 190, 255, 414, 585, 1110, 1200
Hpy188III TCNNGA 7 cut(s) 118, 226, 398, 527, 565, 667, 1471
Hpy8I GTNNAC 4 cut(s) 1058, 1348, 1517, 1538
HpyAV CCTTC 3 cut(s) 501, 1028, 1477
HpyCH4III ACNGT 5 cut(s) 82, 324, 379, 963, 1133
HpyF10VI GCNNNNNNNGC 9 cut(s) 20, 101, 371, 632, 644, 703, 712, 1163, 1448
Kzo9I GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 3 cut(s) 285, 702, 1326
LweI GCATC 5 cut(s) 319, 656, 662, 1366, 1497
MaeI CTAG 2 cut(s) 1163, 1454
MaeIII GTNAC 4 cut(s) 76, 1178, 1250, 1567
MalI GATC 6 cut(s) 411, 438, 464, 525, 1245, 1360
MboI GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
MboII GAAGA 7 cut(s) 17, 188, 1039, 1238, 1353, 1410, 1569
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 1 cut(s) 1358
MhlI GDGCHC 5 cut(s) 282, 507, 1350, 1453, 1540
MluCI AATT 8 cut(s) 66, 139, 393, 431, 591, 1226, 1365, 1501
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 1 cut(s) 1438
Mph1103I ATGCAT 1 cut(s) 708
MroXI GAANNNNTTC 2 cut(s) 125, 195
MseI TTAA 4 cut(s) 65, 456, 594, 1404
MslI CAYNNNNRTG 1 cut(s) 444
MspA1I CMGCKG 2 cut(s) 718, 1373
MspI CCGG 4 cut(s) 165, 890, 1386, 1495
MspR9I CCNGG 6 cut(s) 165, 609, 829, 890, 967, 1394
MunI CAATTG 1 cut(s) 431
MvaI CCWGG 4 cut(s) 609, 829, 967, 1394
MwoI GCNNNNNNNGC 9 cut(s) 20, 101, 371, 632, 644, 703, 712, 1163, 1448
NciI CCSGG 2 cut(s) 165, 890
NcoI CCATGG 2 cut(s) 260, 360
NdeII GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
NlaIV GGNNCC 5 cut(s) 169, 281, 338, 356, 1465
NmuCI GTSAC 1 cut(s) 1178
NsiI ATGCAT 1 cut(s) 708
NspI RCATGY 4 cut(s) 710, 944, 1145, 1189
PaeI GCATGC 3 cut(s) 710, 944, 1145
PagI TCATGA 1 cut(s) 564
PceI AGGCCT 1 cut(s) 580
PciSI GCTCTTC 1 cut(s) 201
PdmI GAANNNNTTC 2 cut(s) 125, 195
PfeI GAWTC 4 cut(s) 256, 272, 586, 1070
PfoI TCCNGGA 1 cut(s) 965
PleI GAGTC 1 cut(s) 443
PpsI GAGTC 1 cut(s) 443
PpuMI RGGWCCY 1 cut(s) 337
Psp124BI GAGCTC 1 cut(s) 507
Psp5II RGGWCCY 1 cut(s) 337
Psp6I CCWGG 4 cut(s) 607, 827, 965, 1392
PspFI CCCAGC 1 cut(s) 711
PspGI CCWGG 4 cut(s) 607, 827, 965, 1392
PspN4I GGNNCC 5 cut(s) 169, 281, 338, 356, 1465
PspPI GGNCC 7 cut(s) 167, 337, 535, 887, 1015, 1463, 1549
PspPPI RGGWCCY 1 cut(s) 337
PstI CTGCAG 3 cut(s) 637, 1042, 1140
PstNI CAGNNNCTG 2 cut(s) 632, 718
PsuI RGATCY 1 cut(s) 1358
PvuII CAGCTG 2 cut(s) 718, 1373
RsaI GTAC 3 cut(s) 985, 1028, 1334
RsaNI GTAC 3 cut(s) 984, 1027, 1333
RseI CAYNNNNRTG 1 cut(s) 444
SacI GAGCTC 1 cut(s) 507
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 4 cut(s) 65, 456, 594, 1404
Sau3AI GATC 6 cut(s) 409, 436, 462, 523, 1243, 1358
Sau96I GGNCC 7 cut(s) 167, 337, 535, 887, 1015, 1463, 1549
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 6 cut(s) 165, 609, 829, 890, 967, 1394
SduI GDGCHC 5 cut(s) 282, 507, 1350, 1453, 1540
SfaNI GCATC 5 cut(s) 319, 656, 662, 1366, 1497
SfcI CTRYAG 4 cut(s) 633, 1038, 1136, 1174
SinI GGWCC 3 cut(s) 337, 535, 1015
SmiMI CAYNNNNRTG 1 cut(s) 444
SphI GCATGC 3 cut(s) 710, 944, 1145
Sse9I AATT 8 cut(s) 66, 139, 393, 431, 591, 1226, 1365, 1501
SseBI AGGCCT 1 cut(s) 580
SsiI CCGC 2 cut(s) 61, 422
SspMI CTAG 2 cut(s) 1163, 1454
SstI GAGCTC 1 cut(s) 507
StuI AGGCCT 1 cut(s) 580
StyD4I CCNGG 6 cut(s) 163, 607, 827, 888, 965, 1392
StyI CCWWGG 2 cut(s) 260, 360
TaaI ACNGT 5 cut(s) 82, 324, 379, 963, 1133
TaqI TCGA 2 cut(s) 1488, 1505
TasI AATT 8 cut(s) 66, 139, 393, 431, 591, 1226, 1365, 1501
TatI WGTACW 1 cut(s) 1026
TfiI GAWTC 4 cut(s) 256, 272, 586, 1070
Tru1I TTAA 4 cut(s) 65, 456, 594, 1404
Tru9I TTAA 4 cut(s) 65, 456, 594, 1404
TscAI CASTG 3 cut(s) 472, 850, 1108
TseFI GTSAC 1 cut(s) 1178
Tsp45I GTSAC 1 cut(s) 1178
TspDTI ATGAA 4 cut(s) 431, 822, 1039, 1491
TspRI CASTG 3 cut(s) 472, 850, 1108
VneI GTGCAC 2 cut(s) 1346, 1536
VpaK11BI GGWCC 3 cut(s) 337, 535, 1015
XapI RAATTY 2 cut(s) 393, 1226
XceI RCATGY 4 cut(s) 710, 944, 1145, 1189
XmnI GAANNNNTTC 2 cut(s) 125, 195
XspI CTAG 2 cut(s) 1163, 1454
Zsp2I ATGCAT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.