Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002005

Physical Location & Seq

Genomic Coordinates Forward (+)

35191797 .. 35194661

Gene Structure 2865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G397300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGAAAATCGCAGTAGAAGGTTGTATGCATGGCGACCTCGACAATGTCTACAGAACCCTCCAACACTACGAAAAACTTCACAGCACCAAAATCGACCTTCTCCTCTGCTGCGGCGACTTTCAGGCTGTGAGGAATGAGAAGGATTTAGAGAGTTTAAATGTGCCTCGAAAATATCGGGACATGAAGACCTTCTGGAAATACTATTCCGGCGAGGAAGTTGCTCCGTTCCCCACAATATTCATCGGTGGAAATCACGAAGCTTCTAATTATTTGTGGGAACTGTATTATGGAGGGTGGGCAGCACCTAATATATACTTCTTGGGGTTTGCTGGGGTAGTCAAGTTTGGAAACATTCGAATTGGTGGGCTGTCTGGAATTTACAACCGGCACAATTATTGCAGAGGGCACTATGAGAGGCCTCCTTATAATGAGAGTACTATCAGGTCCATATATCATGTTCGTGAGTATGATGTCCACAAACTCATGCAAGTTGAGGAACCAATTGATATTTTTCTTTCACATGATTGGCCTGTTGGCATCACTGATTGTGGGGACTGGAAGAAACTTGTTCGGGACAAACCTTTTTTTGAGAAGGAGGTTCAGGAAAGAAATCTTGGGAGTAAACCAGCTGCTCAATTGCTAGAAAAACTGAAACCACCTTATTGGTTTTCAGCTCATCTACACTGCAAATTTGCTGCTCTTGTTCAGCACGAGGAAGATGGTTCAGTGACAAACTTTCTTGCCCTTGACAAGTGCCAACCAGGACGCAAATTTCTGCAGGTTATTGAAATTGAATCTGAGCCAGGCCCTTATGAAATCCAGTATGATGAAGAATGGCTAGAAATAACTCGGCGATTTAACTCTAATTTCCCTCTCACAAATAGAAGTGCAAATTTTTGGAATGTACATCTTGACAAGCAAGATTGTCGTCAATGGGTCAGGAGAAATTTACAAGCAAGAGGGGCTAGACCTTTTGAATTCACCCAGACAGCTCCACCTTACAATCCCTCTAACTCTGTCCTGAGCGGTACCTTTCCCGAATACACTCGGAATCCTCAGACAGAATCTCTTTTGCAGTTTCTGGAACTTCCTTACCTTCTTGATAACACATCAGAATCATCACAAGTACCCAGGAGTCCTCTTCCATTGATCCGTACAGGTTCTCTTGAAGATAACAGTGAAGACATTCCCATTGATGATGTAGATGATGTGGATGAGTTGGAAGAACTAGCTGAAGATGCGGTGGATACTAAAACTGAAAATATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0008419 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBR1 Metallophos peroxidase

Protein Analysis

423

Amino Acids

49.02

Weight (kDa)

5.13

Isoelectric Point (pI)

49.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31770 AT4G31770
fragaria_vesca	FvH4_2g41360 FvH4_6g29560
malus_domestica	MD08G1051300.v1.1 MD13G1228500.v1.1 MD15G1043800.v1.1
prunus_persica	Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1
pyrus_communis	pycom15g04070
rosa_chinensis	RchiOBHm_Chr1g0357361 RchiOBHm_Chr2g0135121 RchiOBHm_Chr6g0299131
rosa_laevigata	RLG00000011460 RLG00000019443 RLG00000028022
rosa_multiflora	Rmu_co8086444.1_g000001 Rmu_sc0001385.1_g000017 Rmu_sc0001434.1_g000018 Rmu_sc0003543.1_g000005
rosa_roxburghii	Rroxscaffold_2G00109470 Rroxscaffold_7G00168980
rosa_rugosa	Rorug01G0256500 Rorug02G0323300 Rorug06G0285600
rosa_samantha	Rh1AG270400 Rh1CG254100 Rh1CG254200 Rh2AG371700 Rh2BG379800 Rh2CG358900 Rh2DG396400 Rh6AG396600 Rh6BG404800 Rh6BG405000 Rh6CG411100 Rh6DG397800
rosa_wichuraiana	Rw0G013580 Rw1G023910 Rw1G023940 Rw6G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	426
Acc36I	ACCTGC	1 cut(s)	769
Acc65I	GGTACC	1 cut(s)	1028
AccB1I	GGYRCC	1 cut(s)	1028
AccBSI	CCGCTC	1 cut(s)	1026
AccI	GTMKAC	1 cut(s)	48
AciI	CCGC	3 cut(s)	111, 1026, 1241
AclWI	GGATC	1 cut(s)	1144
AcsI	RAATTY	6 cut(s)	375, 689, 770, 892, 946, 977
AcuI	CTGAAG	1 cut(s)	1254
AfaI	GTAC	5 cut(s)	436, 906, 1030, 1128, 1156
AgsI	TTSAA	4 cut(s)	788, 794, 977, 1169
AjnI	CCWGG	3 cut(s)	760, 802, 1130
AjuI	GAANNNNNNNTTGG	2 cut(s)	597, 629
AluBI	AGCT	5 cut(s)	260, 629, 674, 992, 1232
AluI	AGCT	5 cut(s)	260, 629, 674, 992, 1232
AlwI	GGATC	1 cut(s)	1144
AlwNI	CAGNNNCTG	1 cut(s)	1081
AoxI	GGCC	3 cut(s)	416, 527, 805
ApeKI	GCWGC	4 cut(s)	108, 299, 629, 695
ApoI	RAATTY	6 cut(s)	375, 689, 770, 892, 946, 977
Asp700I	GAANNNNTTC	3 cut(s)	75, 188, 1185
Asp718I	GGTACC	1 cut(s)	1028
AspS9I	GGNCC	2 cut(s)	444, 806
AsuHPI	GGTGA	1 cut(s)	973
AsuII	TTCGAA	1 cut(s)	355
AvaII	GGWCC	1 cut(s)	444
BaeGI	GKGCMC	1 cut(s)	408
BanI	GGYRCC	1 cut(s)	1028
BauI	CACGAG	1 cut(s)	710
BbsI	GAAGAC	2 cut(s)	191, 1188
BbvI	GCAGC	4 cut(s)	95, 311, 616, 682
BccI	CCATC	1 cut(s)	713
BcgI	CGANNNNNNTGC	6 cut(s)	73, 107, 200, 234, 908, 942
BciT130I	CCWGG	3 cut(s)	762, 804, 1132
BciVI	GTATCC	1 cut(s)	1240
BfaI	CTAG	4 cut(s)	641, 839, 966, 1229
BfmI	CTRYAG	2 cut(s)	49, 776
BfuAI	ACCTGC	1 cut(s)	769
BfuI	GTATCC	1 cut(s)	1240
BisI	GCNGC	5 cut(s)	109, 112, 300, 630, 696
BlsI	GCNGC	5 cut(s)	110, 113, 301, 631, 697
BmcAI	AGTACT	1 cut(s)	436
Bme1390I	CCNGG	3 cut(s)	762, 804, 1132
Bme18I	GGWCC	1 cut(s)	444
BmgT120I	GGNCC	2 cut(s)	444, 806
BmiI	GGNNCC	2 cut(s)	498, 1030
BmrFI	CCNGG	3 cut(s)	762, 804, 1132
BmsI	GCATC	2 cut(s)	546, 1228
BpiI	GAAGAC	2 cut(s)	191, 1188
Bpu10I	CCTNAGC	1 cut(s)	1022
Bpu14I	TTCGAA	1 cut(s)	355
BsaJI	CCNNGG	1 cut(s)	1130
Bse118I	RCCGGY	1 cut(s)	384
Bse1I	ACTGG	2 cut(s)	560, 820
BseBI	CCWGG	3 cut(s)	762, 804, 1132
BseDI	CCNNGG	1 cut(s)	1130
BseGI	GGATG	1 cut(s)	1219
BseMII	CTCAG	3 cut(s)	789, 1013, 1070
BseNI	ACTGG	2 cut(s)	560, 820
BseRI	GAGGAG	1 cut(s)	92
BseSI	GKGCMC	1 cut(s)	408
BseXI	GCAGC	4 cut(s)	95, 311, 616, 682
BseYI	CCCAGC	1 cut(s)	329
BshFI	GGCC	3 cut(s)	418, 529, 807
BshNI	GGYRCC	1 cut(s)	1028
BsiSI	CCGG	2 cut(s)	207, 385
BslFI	GGGAC	3 cut(s)	191, 566, 587
BsmFI	GGGAC	3 cut(s)	191, 566, 587
BsnI	GGCC	3 cut(s)	418, 529, 807
Bsp119I	TTCGAA	1 cut(s)	355
Bsp1286I	GDGCHC	1 cut(s)	408
Bsp1407I	TGTACA	1 cut(s)	904
Bsp143I	GATC	1 cut(s)	1149
BspACI	CCGC	3 cut(s)	111, 1026, 1241
BspANI	GGCC	3 cut(s)	418, 529, 807
BspCNI	CTCAG	3 cut(s)	790, 1014, 1069
BspLI	GGNNCC	2 cut(s)	498, 1030
BspMAI	CTGCAG	1 cut(s)	780
BspMI	ACCTGC	1 cut(s)	769
BspPI	GGATC	1 cut(s)	1144
BspT104I	TTCGAA	1 cut(s)	355
BspT107I	GGYRCC	1 cut(s)	1028
BsrBI	CCGCTC	1 cut(s)	1026
BsrFI	RCCGGY	1 cut(s)	384
BsrGI	TGTACA	1 cut(s)	904
BsrI	ACTGG	2 cut(s)	560, 820
BssAI	RCCGGY	1 cut(s)	384
BssECI	CCNNGG	1 cut(s)	1130
BssMI	GATC	1 cut(s)	1149
BssSI	CACGAG	1 cut(s)	710
Bst2BI	CACGAG	1 cut(s)	710
Bst2UI	CCWGG	3 cut(s)	762, 804, 1132
Bst4CI	ACNGT	2 cut(s)	282, 1178
Bst6I	CTCTTC	1 cut(s)	1146
BstAUI	TGTACA	1 cut(s)	904
BstBI	TTCGAA	1 cut(s)	355
BstDEI	CTNAG	3 cut(s)	798, 1022, 1056
BstF5I	GGATG	1 cut(s)	1219
BstKTI	GATC	1 cut(s)	1152
BstMBI	GATC	1 cut(s)	1149
BstMWI	GCNNNNNNNGC	2 cut(s)	962, 1238
BstNI	CCWGG	3 cut(s)	762, 804, 1132
BstSCI	CCNGG	3 cut(s)	760, 802, 1130
BstSFI	CTRYAG	2 cut(s)	49, 776
BstSLI	GKGCMC	1 cut(s)	408
BstV1I	GCAGC	4 cut(s)	95, 311, 616, 682
BstV2I	GAAGAC	2 cut(s)	191, 1188
BstXI	CCANNNNNNTGG	1 cut(s)	663
BsuI	GTATCC	1 cut(s)	1240
BsuRI	GGCC	3 cut(s)	418, 529, 807
BtsCI	GGATG	1 cut(s)	1219
BtsI	GCAGTG	1 cut(s)	682
BtsIMutI	CAGTG	4 cut(s)	540, 682, 732, 1183
BveI	ACCTGC	1 cut(s)	769
CaiI	CAGNNNCTG	1 cut(s)	1081
Cfr10I	RCCGGY	1 cut(s)	384
Cfr13I	GGNCC	2 cut(s)	444, 806
CseI	GACGC	1 cut(s)	774
Csp6I	GTAC	5 cut(s)	435, 905, 1029, 1127, 1155
CviAII	CATG	5 cut(s)	29, 181, 455, 484, 521
CviQI	GTAC	5 cut(s)	435, 905, 1029, 1127, 1155
DdeI	CTNAG	3 cut(s)	798, 1022, 1056
DpnI	GATC	1 cut(s)	1151
DpnII	GATC	1 cut(s)	1149
DraI	TTTAAA	1 cut(s)	156
Eam1104I	CTCTTC	1 cut(s)	1146
EarI	CTCTTC	1 cut(s)	1146
Eco147I	AGGCCT	1 cut(s)	418
Eco47I	GGWCC	1 cut(s)	444
Eco57I	CTGAAG	1 cut(s)	1254
EcoO109I	RGGNCCY	1 cut(s)	806
EcoRI	GAATTC	1 cut(s)	977
EcoRII	CCWGG	3 cut(s)	760, 802, 1130
EcoT22I	ATGCAT	1 cut(s)	30
FaeI	CATG	5 cut(s)	32, 184, 458, 487, 524
FaqI	GGGAC	3 cut(s)	191, 566, 587
FatI	CATG	5 cut(s)	28, 180, 454, 483, 520
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	5 cut(s)	109, 112, 300, 630, 696
FokI	GGATG	1 cut(s)	1226
Fsp4HI	GCNGC	5 cut(s)	109, 112, 300, 630, 696
FspBI	CTAG	4 cut(s)	641, 839, 966, 1229
GluI	GCNGC	5 cut(s)	109, 112, 300, 630, 696
GsaI	CCCAGC	1 cut(s)	333
HaeIII	GGCC	3 cut(s)	418, 529, 807
HapII	CCGG	2 cut(s)	207, 385
HgaI	GACGC	1 cut(s)	774
Hin1II	CATG	5 cut(s)	32, 184, 458, 487, 524
HindIII	AAGCTT	1 cut(s)	258
HinfI	GANTC	5 cut(s)	794, 1051, 1064, 1115, 1135
HpaII	CCGG	2 cut(s)	207, 385
HphI	GGTGA	1 cut(s)	973
Hpy166II	GTNNAC	3 cut(s)	49, 475, 623
Hpy188I	TCNGA	4 cut(s)	799, 1050, 1059, 1114
Hpy8I	GTNNAC	3 cut(s)	49, 475, 623
HpyAV	CCTTC	6 cut(s)	11, 107, 133, 199, 586, 1106
HpyCH4III	ACNGT	2 cut(s)	282, 1178
HpyCH4V	TGCA	7 cut(s)	28, 399, 487, 687, 778, 890, 1075
HpyF10VI	GCNNNNNNNGC	2 cut(s)	962, 1238
HpyF3I	CTNAG	3 cut(s)	798, 1022, 1056
Hsp92II	CATG	5 cut(s)	32, 184, 458, 487, 524
KpnI	GGTACC	1 cut(s)	1032
Kzo9I	GATC	1 cut(s)	1149
LmnI	GCTCC	2 cut(s)	226, 997
Lsp1109I	GCAGC	4 cut(s)	95, 311, 616, 682
LweI	GCATC	2 cut(s)	546, 1228
MaeI	CTAG	4 cut(s)	641, 839, 966, 1229
MaeIII	GTNAC	1 cut(s)	727
MalI	GATC	1 cut(s)	1151
MbiI	CCGCTC	1 cut(s)	1026
MboI	GATC	1 cut(s)	1149
MboII	GAAGA	9 cut(s)	196, 571, 728, 842, 1133, 1181, 1193, 1235, 1247
MfeI	CAATTG	2 cut(s)	501, 635
MhlI	GDGCHC	1 cut(s)	408
MlyI	GAGTC	1 cut(s)	1144
MmeI	TCCRAC	2 cut(s)	85, 1200
Mph1103I	ATGCAT	1 cut(s)	30
MroXI	GAANNNNTTC	3 cut(s)	75, 188, 1185
MseI	TTAA	2 cut(s)	155, 858
MslI	CAYNNNNRTG	1 cut(s)	459
MspA1I	CMGCKG	1 cut(s)	629
MspI	CCGG	2 cut(s)	207, 385
MspR9I	CCNGG	3 cut(s)	762, 804, 1132
MunI	CAATTG	2 cut(s)	501, 635
MvaI	CCWGG	3 cut(s)	762, 804, 1132
MwoI	GCNNNNNNNGC	2 cut(s)	962, 1238
NdeII	GATC	1 cut(s)	1149
NlaIII	CATG	5 cut(s)	32, 184, 458, 487, 524
NlaIV	GGNNCC	2 cut(s)	498, 1030
NmeAIII	GCCGAG	1 cut(s)	829
NmuCI	GTSAC	1 cut(s)	727
NsiI	ATGCAT	1 cut(s)	30
NspV	TTCGAA	1 cut(s)	355
PceI	AGGCCT	1 cut(s)	418
PdmI	GAANNNNTTC	3 cut(s)	75, 188, 1185
PfeI	GAWTC	4 cut(s)	794, 1051, 1064, 1115
PflFI	GACNNNGTC	1 cut(s)	44
PkrI	GCNGC	5 cut(s)	110, 113, 301, 631, 697
PleI	GAGTC	1 cut(s)	1143
PpsI	GAGTC	1 cut(s)	1143
PsiI	TTATAA	1 cut(s)	426
Psp6I	CCWGG	3 cut(s)	760, 802, 1130
PspFI	CCCAGC	1 cut(s)	329
PspGI	CCWGG	3 cut(s)	760, 802, 1130
PspN4I	GGNNCC	2 cut(s)	498, 1030
PspPI	GGNCC	2 cut(s)	444, 806
PstI	CTGCAG	1 cut(s)	780
PstNI	CAGNNNCTG	1 cut(s)	1081
PsyI	GACNNNGTC	1 cut(s)	44
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	5 cut(s)	436, 906, 1030, 1128, 1156
RsaNI	GTAC	5 cut(s)	435, 905, 1029, 1127, 1155
RseI	CAYNNNNRTG	1 cut(s)	459
SaqAI	TTAA	2 cut(s)	155, 858
SatI	GCNGC	5 cut(s)	109, 112, 300, 630, 696
Sau3AI	GATC	1 cut(s)	1149
Sau96I	GGNCC	2 cut(s)	444, 806
ScaI	AGTACT	1 cut(s)	436
SchI	GAGTC	1 cut(s)	1144
ScrFI	CCNGG	3 cut(s)	762, 804, 1132
SduI	GDGCHC	1 cut(s)	408
SfaNI	GCATC	2 cut(s)	546, 1228
SfcI	CTRYAG	2 cut(s)	49, 776
SfuI	TTCGAA	1 cut(s)	355
SinI	GGWCC	1 cut(s)	444
SmiMI	CAYNNNNRTG	1 cut(s)	459
SseBI	AGGCCT	1 cut(s)	418
SsiI	CCGC	3 cut(s)	111, 1026, 1241
SspI	AATATT	2 cut(s)	237, 1264
SspMI	CTAG	4 cut(s)	641, 839, 966, 1229
StuI	AGGCCT	1 cut(s)	418
StyD4I	CCNGG	3 cut(s)	760, 802, 1130
TaaI	ACNGT	2 cut(s)	282, 1178
TaqI	TCGA	4 cut(s)	39, 93, 166, 355
TatI	WGTACW	2 cut(s)	434, 904
TauI	GCSGC	1 cut(s)	114
TfiI	GAWTC	4 cut(s)	794, 1051, 1064, 1115
Tru1I	TTAA	2 cut(s)	155, 858
Tru9I	TTAA	2 cut(s)	155, 858
TscAI	CASTG	4 cut(s)	547, 689, 732, 1183
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	4 cut(s)	108, 299, 629, 695
Tsp45I	GTSAC	1 cut(s)	727
TspDTI	ATGAA	5 cut(s)	17, 197, 229, 828, 843
TspGWI	ACGGA	2 cut(s)	213, 1142
TspRI	CASTG	4 cut(s)	547, 689, 732, 1183
Tth111I	GACNNNGTC	1 cut(s)	44
VpaK11BI	GGWCC	1 cut(s)	444
XapI	RAATTY	6 cut(s)	375, 689, 770, 892, 946, 977
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	3 cut(s)	75, 188, 1185
XspI	CTAG	4 cut(s)	641, 839, 966, 1229
ZrmI	AGTACT	1 cut(s)	436
Zsp2I	ATGCAT	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.