Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002005

Physical Location & Seq

Genomic Coordinates Forward (+)

9682869 .. 9687925

Gene Structure 5057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGAAAATTGCAGTAGAAGGATGTATGCACGGTGACCTGGAGAACGTGTACAGAACCCTCCAACACATAGAAAAAGTTCACAACACCAAAATCGACCTCCTCCTCTGCTGCGGCGACTTTCAGGCCGTGAGGAATGAGAAGGATTTGGAGAGCTTGAGTGTGCCCCCCAAGTACCGATCCATGAACTCCTTCTGGAAGTACTATTCCGGCGAGGAGATCGCTCCCTATCCCACCATATTCATCGGTGGCAATCACGAAGCTTCTAATTATTTGTGGGAACTGTACTACGGAGGGTGGGCGGCACCTAATATATACTTCTTGGGGTTTGCTGGGGTAGTCAAGTTCGGAAACCTTCGCATTGGTGGCCTCTCTGGAATTTATAAGTCGCGAGACTATCGTTCAGGACACTATGAGAGGCCTCCTTATAATGCGAAGACCGTCAAGTCTGTATATCATGTTCGTGAGTATGATGTCCACAAACTCATGCAAGTTGAGGAACCAATCGATATTTTTCTTTCACATGATTGGCCTCTTGGCATCACCGATTGTGGGGACTGGAAGCAACTTGTTCGATACAAACCTCATTTTGAGACCGAGGTTCGGGAAAGAACCCTGGGAAGTAAACCTGCTGCTCAATTGCTAGAAAAATTGAAACCACCCTATTGGTTTTCAGCTCATCTACACTGCAAATTTGCTGCTCGTGTTCAGCATGGGGAAGATGGTCCCGTGACGAATTTTCTTGCTCTTGATAAGTGTCTTCCTGGAAAGAGGTTTTTGCAGGTTCTTGATATTGACTCAGAGCCAGGGCCGTACGAGATTCAGTATGATGAAGAATGGCTAGAAATAACTCGGAGGTTTAACCCTATTTTCCCTCTCACAATCAGGACTGCAAATTTCAGGGGTGTACATATTGACAAGCAAGATTGTCGTCAATGGGTAAGGAGTAAGCTACAAGCAAGAGGAGCCCGACCTTTTGTATTCAGCCAGACAGCTCCATCTTATAATCCCTCTAATTCTGTCTCAAATGGTTCCTCGCCTGGATATACTCGGAATCCTCAAACAGAATCTTTGTTGCAGTTTCTGGAACTCCCTTATCTTCTTGATGACATGTCAGAATCTTCGGAAGTATCCAGGAGTCCTTTTCCATCAAGCGATAGAGATGACAACGAAGAGATTCCCATTGATGATGTGGATGAGTTAGAAGACCTTGCTGAAGAGGCTGGAGATGCTGAACATGATGGTTGTGATGCCTCTGTGCTTCTACAAGGAAATGGAACTGAGAGAAGCGATCCAGCAAACCAATCTCTGGGAGGGTTTTCAGTTATTGATTCAGCAAAAAGATTGCTTGAAATTTTCTGTCCAGGAACTGTTTCTTGTGCTGACATTGTTGCTTTGGCTGCTAGAGATGCTGTTGAACTTACGGGAGGACCCGTGGTTCATATTCCAACTGGTAGGCGAGATGGGAAGGTTTCATCAGCTTCAAATGTCAGGCCTAATATTGTAGATACAAGCTTTACAATGACTGAGATGATAAAGCTCTTCTCTTCTAAAGGCTTGTCTTTGGAGGACCTTGTAACCCTCTCAGGAGCTCACACTATAGGAGCAGCTCATTGCAGTGCATTCAGTGACCGGTTCCAAGAAGACTCGAAAGGAAAATTCACACTCATTGACACATCTTTAGACAATGGCTATGCAGAGAAGCTCATGAAACAGTGCCCTCCAGGAGCAAATCCATCTATAACAGTCCAAAATGATCCTGAAACTTCCTTTGTGTTTGATAATCATTACTACGGCAATCTGTTGGCCCACAGAGGGCTGTTTCAATCAGATTCAATCCTGTTCACCGACAGTAGATCAAGCAAACAAGTGAAGAATTTTGCAGAAGACCAAGTTGGATTTTTTGAGAGTTGGGTTCAGTCATTCTTGAAGCTTACTAGCATTCATGTTAAGACAGGTGATGAAGGGGAAATTCGAGCATTTTGTCCTACAGCTAATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0008419 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBR1 Metallophos peroxidase

Protein Analysis

666

Amino Acids

74.65

Weight (kDa)

5.29

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	1 - 229	2.6e-14	Calcineurin-like phosphoesterase
DBR1	PF05011	243 - 364	4e-27	Lariat debranching enzyme, C-terminal domain
peroxidase	PF00141	412 - 629	1.5e-68	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31770 AT4G31770
fragaria_vesca	FvH4_2g41360 FvH4_6g29560
malus_domestica	MD08G1051300.v1.1 MD13G1228500.v1.1 MD15G1043800.v1.1
prunus_persica	Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1 Prupe.1G397300_v2.0.a1
pyrus_communis	pycom15g04070
rosa_chinensis	RchiOBHm_Chr1g0357361 RchiOBHm_Chr2g0135121 RchiOBHm_Chr6g0299131
rosa_laevigata	RLG00000011460 RLG00000019443 RLG00000028022
rosa_multiflora	Rmu_co8086444.1_g000001 Rmu_sc0001385.1_g000017 Rmu_sc0001434.1_g000018 Rmu_sc0003543.1_g000005
rosa_roxburghii	Rroxscaffold_2G00109470 Rroxscaffold_7G00168980
rosa_rugosa	Rorug01G0256500 Rorug02G0323300 Rorug06G0285600
rosa_samantha	Rh1AG270400 Rh1CG254100 Rh1CG254200 Rh2AG371700 Rh2BG379800 Rh2CG358900 Rh2DG396400 Rh6AG396600 Rh6BG404800 Rh6BG405000 Rh6CG411100 Rh6DG397800
rosa_wichuraiana	Rw0G013580 Rw1G023910 Rw1G023940 Rw6G034720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	381, 426, 1002
AasI	GACNNNNNNGTC	1 cut(s)	442
Acc36I	ACCTGC	2 cut(s)	634, 769
AccB1I	GGYRCC	1 cut(s)	301
AccB7I	CCANNNNNTGG	1 cut(s)	1306
AccII	CGCG	1 cut(s)	388
AciI	CCGC	2 cut(s)	111, 299
AclWI	GGATC	3 cut(s)	171, 1283, 1748
AcsI	RAATTY	8 cut(s)	375, 689, 733, 892, 1350, 1655, 1873, 1968
AcuI	CTGAAG	1 cut(s)	1233
AfaI	GTAC	6 cut(s)	50, 173, 200, 284, 812, 906
AfiI	CCNNNNNNNGG	4 cut(s)	549, 600, 1306, 1812
AflIII	ACRYGT	2 cut(s)	45, 1107
AgeI	ACCGGT	1 cut(s)	1629
AgsI	TTSAA	7 cut(s)	652, 1349, 1415, 1482, 1823, 1833, 1927
AjnI	CCWGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
AjuI	GAANNNNNNNTTGG	2 cut(s)	1875, 1907
AloI	GAACNNNNNNTCC	2 cut(s)	1419, 1451
Alw21I	GWGCWC	1 cut(s)	1591
Alw26I	GTCTC	3 cut(s)	384, 584, 1024
AlwI	GGATC	3 cut(s)	171, 1283, 1748
AlwNI	CAGNNNCTG	2 cut(s)	1081, 1367
AoxI	GGCC	7 cut(s)	123, 364, 416, 527, 806, 1490, 1803
ApeKI	GCWGC	5 cut(s)	108, 629, 695, 1397, 1604
ApoI	RAATTY	8 cut(s)	375, 689, 733, 892, 1350, 1655, 1873, 1968
AsiGI	ACCGGT	1 cut(s)	1629
Asp700I	GAANNNNTTC	4 cut(s)	75, 188, 1173, 1369
AspS9I	GGNCC	5 cut(s)	722, 806, 1427, 1567, 1804
AsuHPI	GGTGA	4 cut(s)	44, 532, 1834, 1967
AvaII	GGWCC	3 cut(s)	722, 1427, 1567
BaeGI	GKGCMC	2 cut(s)	165, 1718
BanI	GGYRCC	1 cut(s)	301
BanII	GRGCYC	2 cut(s)	967, 1591
BauI	CACGAG	1 cut(s)	699
BbsI	GAAGAC	5 cut(s)	440, 749, 1209, 1647, 1890
Bbv12I	GWGCWC	1 cut(s)	1591
BbvI	GCAGC	5 cut(s)	95, 616, 682, 1384, 1616
BccI	CCATC	6 cut(s)	713, 1003, 1153, 1232, 1454, 1741
BceAI	ACGGC	3 cut(s)	110, 793, 1807
BcgI	CGANNNNNNTGC	4 cut(s)	551, 585, 908, 942
BciT130I	CCWGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
BciVI	GTATCC	1 cut(s)	1138
BcoDI	GTCTC	3 cut(s)	384, 584, 1024
BfaI	CTAG	4 cut(s)	641, 839, 1401, 1935
BfmI	CTRYAG	2 cut(s)	1596, 1986
BfuAI	ACCTGC	2 cut(s)	634, 769
BfuI	GTATCC	1 cut(s)	1138
BisI	GCNGC	7 cut(s)	109, 112, 300, 630, 696, 1398, 1605
BlsI	GCNGC	7 cut(s)	110, 113, 301, 631, 697, 1399, 1606
BmcAI	AGTACT	1 cut(s)	200
Bme1390I	CCNGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
Bme18I	GGWCC	3 cut(s)	722, 1427, 1567
BmgT120I	GGNCC	5 cut(s)	722, 806, 1427, 1567, 1804
BmiI	GGNNCC	7 cut(s)	303, 498, 724, 964, 1030, 1429, 1634
BmrFI	CCNGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
BmsI	GCATC	4 cut(s)	546, 1216, 1237, 1396
BpiI	GAAGAC	5 cut(s)	440, 749, 1209, 1647, 1890
BpmI	CTGGAG	3 cut(s)	59, 1242, 1704
BpuEI	CTTGAG	1 cut(s)	175
Bsa29I	ATCGAT	1 cut(s)	504
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	5 cut(s)	594, 612, 613, 803, 1431
BsaWI	WCCGGW	1 cut(s)	1629
BsaXI	ACNNNNNCTCC	4 cut(s)	32, 62, 1416, 1446
Bsc4I	CCNNNNNNNGG	4 cut(s)	549, 600, 1306, 1812
Bse118I	RCCGGY	1 cut(s)	1629
Bse1I	ACTGG	2 cut(s)	560, 1453
Bse3DI	GCAATG	1 cut(s)	1609
BseBI	CCWGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
BseCI	ATCGAT	1 cut(s)	504
BseDI	CCNNGG	5 cut(s)	594, 612, 613, 803, 1431
BseGI	GGATG	2 cut(s)	26, 1198
BseLI	CCNNNNNNNGG	4 cut(s)	549, 600, 1306, 1812
BseMI	GCAATG	1 cut(s)	1609
BseMII	CTCAG	4 cut(s)	810, 1269, 1515, 1596
BseNI	ACTGG	2 cut(s)	560, 1453
BseRI	GAGGAG	4 cut(s)	89, 92, 227, 975
BseSI	GKGCMC	2 cut(s)	165, 1718
BseXI	GCAGC	5 cut(s)	95, 616, 682, 1384, 1616
BseYI	CCCAGC	1 cut(s)	329
Bsh1236I	CGCG	1 cut(s)	388
BshFI	GGCC	7 cut(s)	125, 366, 418, 529, 808, 1492, 1805
BshNI	GGYRCC	1 cut(s)	301
BshTI	ACCGGT	1 cut(s)	1629
BshVI	ATCGAT	1 cut(s)	504
BsiHKAI	GWGCWC	1 cut(s)	1591
BsiSI	CCGG	2 cut(s)	207, 1630
BsiWI	CGTACG	1 cut(s)	810
BslFI	GGGAC	2 cut(s)	566, 708
BslI	CCNNNNNNNGG	4 cut(s)	549, 600, 1306, 1812
BsmAI	GTCTC	3 cut(s)	384, 584, 1024
BsmFI	GGGAC	2 cut(s)	566, 708
BsmI	GAATGC	2 cut(s)	1619, 1938
BsnI	GGCC	7 cut(s)	125, 366, 418, 529, 808, 1492, 1805
Bso31I	GGTCTC	1 cut(s)	584
Bsp1286I	GDGCHC	4 cut(s)	165, 967, 1591, 1718
Bsp1407I	TGTACA	2 cut(s)	48, 904
Bsp143I	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
Bsp68I	TCGCGA	1 cut(s)	388
BspACI	CCGC	2 cut(s)	111, 299
BspANI	GGCC	7 cut(s)	125, 366, 418, 529, 808, 1492, 1805
BspCNI	CTCAG	4 cut(s)	809, 1270, 1516, 1595
BspDI	ATCGAT	1 cut(s)	504
BspFNI	CGCG	1 cut(s)	388
BspHI	TCATGA	1 cut(s)	1704
BspLI	GGNNCC	7 cut(s)	303, 498, 724, 964, 1030, 1429, 1634
BspMI	ACCTGC	2 cut(s)	634, 769
BspPI	GGATC	3 cut(s)	171, 1283, 1748
BspQI	GCTCTTC	1 cut(s)	1544
BspT107I	GGYRCC	1 cut(s)	301
BspTNI	GGTCTC	1 cut(s)	584
BsrDI	GCAATG	1 cut(s)	1609
BsrFI	RCCGGY	1 cut(s)	1629
BsrGI	TGTACA	2 cut(s)	48, 904
BsrI	ACTGG	2 cut(s)	560, 1453
BssAI	RCCGGY	1 cut(s)	1629
BssECI	CCNNGG	5 cut(s)	594, 612, 613, 803, 1431
BssMI	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
BssSI	CACGAG	1 cut(s)	699
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
Bst4CI	ACNGT	7 cut(s)	32, 282, 439, 1369, 1713, 1744, 1850
Bst6I	CTCTTC	4 cut(s)	1164, 1209, 1544, 1549
BstAUI	TGTACA	2 cut(s)	48, 904
BstDEI	CTNAG	4 cut(s)	796, 1278, 1524, 1582
BstDSI	CCRYGG	1 cut(s)	1431
BstEII	GGTNACC	1 cut(s)	32
BstF5I	GGATG	2 cut(s)	26, 1198
BstFNI	CGCG	1 cut(s)	388
BstKTI	GATC	5 cut(s)	179, 219, 1291, 1756, 1856
BstMAI	GTCTC	3 cut(s)	384, 584, 1024
BstMBI	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
BstMWI	GCNNNNNNNGC	6 cut(s)	363, 962, 1217, 1226, 1397, 1406
BstNI	CCWGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
BstNSI	RCATGY	1 cut(s)	1111
BstPI	GGTNACC	1 cut(s)	32
BstSCI	CCNGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
BstSFI	CTRYAG	2 cut(s)	1596, 1986
BstSLI	GKGCMC	2 cut(s)	165, 1718
BstUI	CGCG	1 cut(s)	388
BstV1I	GCAGC	5 cut(s)	95, 616, 682, 1384, 1616
BstV2I	GAAGAC	5 cut(s)	440, 749, 1209, 1647, 1890
BstXI	CCANNNNNNTGG	1 cut(s)	663
Bsu15I	ATCGAT	1 cut(s)	504
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	7 cut(s)	125, 366, 418, 529, 808, 1492, 1805
BsuTUI	ATCGAT	1 cut(s)	504
BtgI	CCRYGG	1 cut(s)	1431
BtsCI	GGATG	2 cut(s)	26, 1198
BtsI	GCAGTG	2 cut(s)	682, 1621
BtsIMutI	CAGTG	4 cut(s)	682, 1621, 1630, 1718
BtuMI	TCGCGA	1 cut(s)	388
BveI	ACCTGC	2 cut(s)	634, 769
CaiI	CAGNNNCTG	2 cut(s)	1081, 1367
CciI	TCATGA	1 cut(s)	1704
Cfr10I	RCCGGY	1 cut(s)	1629
Cfr13I	GGNCC	5 cut(s)	722, 806, 1427, 1567, 1804
ClaI	ATCGAT	1 cut(s)	504
Csp6I	GTAC	6 cut(s)	49, 172, 199, 283, 811, 905
CspAI	ACCGGT	1 cut(s)	1629
CviQI	GTAC	6 cut(s)	49, 172, 199, 283, 811, 905
DdeI	CTNAG	4 cut(s)	796, 1278, 1524, 1582
DpnI	GATC	5 cut(s)	178, 218, 1290, 1755, 1855
DpnII	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
DrdI	GACNNNNNNGTC	1 cut(s)	442
DseDI	GACNNNNNNGTC	1 cut(s)	442
Eam1104I	CTCTTC	4 cut(s)	1164, 1209, 1544, 1549
EarI	CTCTTC	4 cut(s)	1164, 1209, 1544, 1549
Ecl136II	GAGCTC	1 cut(s)	1589
Eco147I	AGGCCT	2 cut(s)	418, 1492
Eco24I	GRGCYC	2 cut(s)	967, 1591
Eco31I	GGTCTC	1 cut(s)	584
Eco47I	GGWCC	3 cut(s)	722, 1427, 1567
Eco53kI	GAGCTC	1 cut(s)	1589
Eco57I	CTGAAG	1 cut(s)	1233
Eco91I	GGTNACC	1 cut(s)	32
EcoICRI	GAGCTC	1 cut(s)	1589
EcoO109I	RGGNCCY	2 cut(s)	1427, 1567
EcoO65I	GGTNACC	1 cut(s)	32
EcoRII	CCWGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
EcoT22I	ATGCAT	1 cut(s)	1999
EcoT38I	GRGCYC	2 cut(s)	967, 1591
FaqI	GGGAC	2 cut(s)	566, 708
Fnu4HI	GCNGC	7 cut(s)	109, 112, 300, 630, 696, 1398, 1605
FokI	GGATG	2 cut(s)	33, 1205
FriOI	GRGCYC	2 cut(s)	967, 1591
Fsp4HI	GCNGC	7 cut(s)	109, 112, 300, 630, 696, 1398, 1605
FspBI	CTAG	4 cut(s)	641, 839, 1401, 1935
GluI	GCNGC	7 cut(s)	109, 112, 300, 630, 696, 1398, 1605
GsaI	CCCAGC	1 cut(s)	333
GsuI	CTGGAG	3 cut(s)	59, 1242, 1704
HaeIII	GGCC	7 cut(s)	125, 366, 418, 529, 808, 1492, 1805
HapII	CCGG	2 cut(s)	207, 1630
HindIII	AAGCTT	3 cut(s)	258, 1510, 1928
HpaII	CCGG	2 cut(s)	207, 1630
HphI	GGTGA	4 cut(s)	44, 532, 1834, 1967
Hpy166II	GTNNAC	6 cut(s)	49, 79, 475, 623, 905, 1842
Hpy188I	TCNGA	7 cut(s)	347, 799, 852, 1050, 1114, 1123, 1828
Hpy8I	GTNNAC	6 cut(s)	49, 79, 475, 623, 905, 1842
HpyAV	CCTTC	6 cut(s)	11, 133, 199, 362, 1459, 1955
HpyCH4III	ACNGT	7 cut(s)	32, 282, 439, 1369, 1713, 1744, 1850
HpyCH4IV	ACGT	1 cut(s)	45
HpyF10VI	GCNNNNNNNGC	6 cut(s)	363, 962, 1217, 1226, 1397, 1406
HpyF3I	CTNAG	4 cut(s)	796, 1278, 1524, 1582
HpySE526I	ACGT	1 cut(s)	45
Kzo9I	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
LguI	GCTCTTC	1 cut(s)	1544
LmnI	GCTCC	6 cut(s)	226, 962, 997, 1586, 1601, 1724
Lsp1109I	GCAGC	5 cut(s)	95, 616, 682, 1384, 1616
LweI	GCATC	4 cut(s)	546, 1216, 1237, 1396
MaeI	CTAG	4 cut(s)	641, 839, 1401, 1935
MaeII	ACGT	1 cut(s)	45
MaeIII	GTNAC	4 cut(s)	32, 727, 1573, 1625
MalI	GATC	5 cut(s)	178, 218, 1290, 1755, 1855
MboI	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
MfeI	CAATTG	1 cut(s)	635
MhlI	GDGCHC	4 cut(s)	165, 967, 1591, 1718
MlyI	GAGTC	3 cut(s)	788, 1144, 1637
MmeI	TCCRAC	3 cut(s)	85, 1469, 1873
Mph1103I	ATGCAT	1 cut(s)	1999
MroXI	GAANNNNTTC	4 cut(s)	75, 188, 1173, 1369
MseI	TTAA	2 cut(s)	858, 1947
MslI	CAYNNNNRTG	2 cut(s)	459, 1614
MspI	CCGG	2 cut(s)	207, 1630
MspR9I	CCNGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
MunI	CAATTG	1 cut(s)	635
Mva1269I	GAATGC	2 cut(s)	1619, 1938
MvaI	CCWGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
MvnI	CGCG	1 cut(s)	388
MwoI	GCNNNNNNNGC	6 cut(s)	363, 962, 1217, 1226, 1397, 1406
NdeII	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
NlaIV	GGNNCC	7 cut(s)	303, 498, 724, 964, 1030, 1429, 1634
NmuCI	GTSAC	3 cut(s)	32, 727, 1625
NruI	TCGCGA	1 cut(s)	388
NsiI	ATGCAT	1 cut(s)	1999
NspI	RCATGY	1 cut(s)	1111
PagI	TCATGA	1 cut(s)	1704
PasI	CCCWGGG	1 cut(s)	613
PceI	AGGCCT	2 cut(s)	418, 1492
PciI	ACATGT	1 cut(s)	1107
PciSI	GCTCTTC	1 cut(s)	1544
PctI	GAATGC	2 cut(s)	1619, 1938
PdmI	GAANNNNTTC	4 cut(s)	75, 188, 1173, 1369
PfeI	GAWTC	7 cut(s)	817, 1051, 1064, 1115, 1174, 1328, 1829
Pfl23II	CGTACG	1 cut(s)	810
PflMI	CCANNNNNTGG	1 cut(s)	1306
PfoI	TCCNGGA	4 cut(s)	760, 1130, 1360, 1720
PinAI	ACCGGT	1 cut(s)	1629
PkrI	GCNGC	7 cut(s)	110, 113, 301, 631, 697, 1399, 1606
PleI	GAGTC	3 cut(s)	788, 1143, 1637
PpsI	GAGTC	3 cut(s)	788, 1143, 1637
PpuMI	RGGWCCY	2 cut(s)	1427, 1567
PscI	ACATGT	1 cut(s)	1107
PsiI	TTATAA	3 cut(s)	381, 426, 1002
Psp124BI	GAGCTC	1 cut(s)	1591
Psp5II	RGGWCCY	2 cut(s)	1427, 1567
Psp6I	CCWGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
PspEI	GGTNACC	1 cut(s)	32
PspFI	CCCAGC	1 cut(s)	329
PspGI	CCWGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
PspLI	CGTACG	1 cut(s)	810
PspN4I	GGNNCC	7 cut(s)	303, 498, 724, 964, 1030, 1429, 1634
PspPI	GGNCC	5 cut(s)	722, 806, 1427, 1567, 1804
PspPPI	RGGWCCY	2 cut(s)	1427, 1567
PsrI	GAACNNNNNNTAC	2 cut(s)	441, 473
PstNI	CAGNNNCTG	2 cut(s)	1081, 1367
RruI	TCGCGA	1 cut(s)	388
RsaI	GTAC	6 cut(s)	50, 173, 200, 284, 812, 906
RsaNI	GTAC	6 cut(s)	49, 172, 199, 283, 811, 905
RseI	CAYNNNNRTG	2 cut(s)	459, 1614
SacI	GAGCTC	1 cut(s)	1591
SapI	GCTCTTC	1 cut(s)	1544
SaqAI	TTAA	2 cut(s)	858, 1947
SatI	GCNGC	7 cut(s)	109, 112, 300, 630, 696, 1398, 1605
Sau3AI	GATC	5 cut(s)	176, 216, 1288, 1753, 1853
Sau96I	GGNCC	5 cut(s)	722, 806, 1427, 1567, 1804
ScaI	AGTACT	1 cut(s)	200
SchI	GAGTC	3 cut(s)	788, 1144, 1637
ScrFI	CCNGG	8 cut(s)	38, 614, 762, 804, 1038, 1132, 1362, 1722
SduI	GDGCHC	4 cut(s)	165, 967, 1591, 1718
SfaNI	GCATC	4 cut(s)	546, 1216, 1237, 1396
SfcI	CTRYAG	2 cut(s)	1596, 1986
SinI	GGWCC	3 cut(s)	722, 1427, 1567
SmiMI	CAYNNNNRTG	2 cut(s)	459, 1614
SmlI	CTYRAG	1 cut(s)	154
SmoI	CTYRAG	1 cut(s)	154
SseBI	AGGCCT	2 cut(s)	418, 1492
SsiI	CCGC	2 cut(s)	111, 299
SspI	AATATT	1 cut(s)	1498
SspMI	CTAG	4 cut(s)	641, 839, 1401, 1935
SstI	GAGCTC	1 cut(s)	1591
StuI	AGGCCT	2 cut(s)	418, 1492
StyD4I	CCNGG	8 cut(s)	36, 612, 760, 802, 1036, 1130, 1360, 1720
TaaI	ACNGT	7 cut(s)	32, 282, 439, 1369, 1713, 1744, 1850
TaiI	ACGT	1 cut(s)	48
TaqI	TCGA	5 cut(s)	93, 504, 571, 1646, 1972
TaqII	GACCGA	1 cut(s)	608
TatI	WGTACW	4 cut(s)	48, 198, 282, 904
TauI	GCSGC	2 cut(s)	114, 302
TfiI	GAWTC	7 cut(s)	817, 1051, 1064, 1115, 1174, 1328, 1829
Tru1I	TTAA	2 cut(s)	858, 1947
Tru9I	TTAA	2 cut(s)	858, 1947
TscAI	CASTG	4 cut(s)	689, 1621, 1630, 1718
TseFI	GTSAC	3 cut(s)	32, 727, 1625
TseI	GCWGC	5 cut(s)	108, 629, 695, 1397, 1604
Tsp45I	GTSAC	3 cut(s)	32, 727, 1625
TspDTI	ATGAA	9 cut(s)	17, 197, 229, 843, 1427, 1461, 1721, 1931, 1974
TspGWI	ACGGA	1 cut(s)	303
TspRI	CASTG	4 cut(s)	689, 1621, 1630, 1718
Van91I	CCANNNNNTGG	1 cut(s)	1306
VpaK11BI	GGWCC	3 cut(s)	722, 1427, 1567
XapI	RAATTY	8 cut(s)	375, 689, 733, 892, 1350, 1655, 1873, 1968
XceI	RCATGY	1 cut(s)	1111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XmnI	GAANNNNTTC	4 cut(s)	75, 188, 1173, 1369
XspI	CTAG	4 cut(s)	641, 839, 1401, 1935
ZrmI	AGTACT	1 cut(s)	200
Zsp2I	ATGCAT	1 cut(s)	1999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.