Prupe.1G428200_v2.0.a1

F-box-like WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0003410
Physical Location & Seq
Reverse (-)
36787914 .. 36792091
4178 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G428200.1

Sequence Viewer

Length: 1677 bp
ATGATCTCCCTCACCTCCAACGAATTGAACTACCTAGTCTTCCGTTACCTCCACGAATCAGGCTTTACGCATTCAGCTTACGCCTTTGGATACGAGGCCGAGCTTCACAAAAGCACGATTGACGGTAATGTAGTTCCGCCAGGCGCACTTGTTACGTTTATCCAGAAAGGGCTTCAATATCTTGAGCTGGAAGCAGACTTGAGCAGCAGTAGTGATGCGGACATGGACGACGACTTTTCGTTTCTGCAACCGTTGGATCTTATCACGAAAGATGCTTATCAATTACAGAAAATGGTCAGGGAGAAGAAGGACAGGATGAACGCAGCTAACCAGAAAAATGAGAGCAAGGAGGAAAGTGAAAGGGAAAATGCTCGAGAAGTAGAGGAGGAAAGAAGAGATAGGGAAAAGGAAGAAGAAGAGGATCGGGAGGACAAGTCGCACAAGGAGAGGGAACAAGAAATTGATAAAGAGAATGAAGAAACACACGAGGATCACAATGAGATTGAGAAAATGGAACCAGAAGAAAATGGAACTTGTGGAGGGGTGGAACCAATGGAAATAACTCCAAGCTCAATATCCTTGCCTAGTGAAATTCCTAGCTCTGACGTAACAGTTCTAGAAGGCCATACCTCAGAGGTTTTTGCTTGTGCATGGAGTCCATCGGGTTCACTTCTTGCATCTGGGTCTGGAGATTCAACAGCGCGAATTTGGACCATTGCAGATGGAGGTTGTGGATCTGGCATGCAAAATGAGCCTGCAAATGTTGCGGTTTTAAAGCATTTCAAAGGTAGAGCCAATGAGAAAAGCAAGGACGTGACCACACTTGATTGGAATGGTGATGGGACATTGCTTGCAACAGGTTCTTACGATGGCCAAGCAAGAATATGGAGTAGAGATGGAGAGTTAAGGACTACATTAATCAAACATAAAGGTCCAATCTTTTCTCTGAAGTGGAACAAGAAAGGTGATTATCTTCTGAGTGGCAGTGTGGATAAAACCGCAATTGTGTGGGACATAAAGAGTGGGGAATGGAAACAGCAGTTTGAATTTCATTCAGCTCCAACCCTGGATGTTGATTGGCGGAACAATGTTTCCTTTGCAACGTGCTCCACTGATACTTTGATACATGTTTGCAAGGTTGGAGAGAACCAACCAATCAAAACTTTCTCAGGGCATCAGGGTGAAGTTAATGCTATTAAGTGGGATCCAACCGGCTCTTTGTTGGCTTCTTGCTCTGATGATTATACTGCAAAGATATGGAGTACGAAGCAGGACAAATATTTGCATGATTTGAAGGAACATGTTAAGGAGATATATACCATCCGGTGGAGTCCTACAGGACCAGGCACAAATAATCCCAATCAACAGTTAGTTCTAGCAAGCGCTTCCTTTGACTCAACTATAAAACTATGGGACGTGGAACTAGGGAGACTTCTCTACAGCTTCAATGGCCACAGGGATCCGGTATACTCTGTTGCATTCAGCCCGGATGGCGAGTACTTGGCCAGTGGATCTATGGATAAATGTATGCACATATGGTCCGTGAAGGAAGGCAAAATTGTAAAAACATACACAGGAAATGGGGGGATATTTGAAGTTTGTTGGAACAAGGAAGGTGACAAGGTCGCTGCGTGTTTTGCTAACAACGTAGTATGTGTTGTGGATTTCCGAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0001067 GO:0002021 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006508 GO:0006511 GO:0006629 GO:0006807 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0015630 GO:0016042 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0017053 GO:0019216 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0023051 GO:0023056 GO:0030111 GO:0030154 GO:0030163 GO:0030177 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035264 GO:0035601 GO:0036211 GO:0040007 GO:0042393 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045444 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0047485 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050872 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051603 GO:0060255 GO:0060612 GO:0060613 GO:0060828 GO:0061448 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090263 GO:0097159 GO:0098732 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04013 ko04310 map04013 map04310
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

559

Amino Acids

62.48

Weight (kDa)

4.89

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1326
AccI GTMKAC 1 cut(s) 1467
AccII CGCG 1 cut(s) 703
AciI CCGC 5 cut(s) 137, 218, 767, 999, 1081
AclWI GGATC 9 cut(s) 264, 429, 498, 742, 1199, 1212, 1454, 1467, 1519
AcoI YGGCCR 3 cut(s) 871, 1450, 1503
AcsI RAATTY 3 cut(s) 591, 705, 1046
AcuI CTGAAG 1 cut(s) 968
AfaI GTAC 2 cut(s) 1264, 1499
AfeI AGCGCT 1 cut(s) 1384
AfiI CCNNNNNNNGG 1 cut(s) 1326
AflIII ACRYGT 2 cut(s) 1126, 1300
AgsI TTSAA 8 cut(s) 28, 176, 696, 784, 1046, 1294, 1447, 1595
AjiI CACGTC 2 cut(s) 814, 1417
AjnI CCWGG 3 cut(s) 139, 1065, 1342
AloI GAACNNNNNNTCC 2 cut(s) 1076, 1108
AluBI AGCT 8 cut(s) 77, 103, 187, 326, 570, 600, 1058, 1443
AluI AGCT 8 cut(s) 77, 103, 187, 326, 570, 600, 1058, 1443
Alw21I GWGCWC 1 cut(s) 1109
Alw26I GTCTC 1 cut(s) 1423
AlwI GGATC 9 cut(s) 264, 429, 498, 742, 1199, 1212, 1454, 1467, 1519
Ama87I CYCGRG 1 cut(s) 372
Aor51HI AGCGCT 1 cut(s) 1384
AoxI GGCC 5 cut(s) 96, 622, 871, 1450, 1503
ApeKI GCWGC 3 cut(s) 204, 323, 1628
ApoI RAATTY 3 cut(s) 591, 705, 1046
AseI ATTAAT 1 cut(s) 917
AspLEI GCGC 3 cut(s) 146, 703, 1385
AspS9I GGNCC 4 cut(s) 711, 932, 1340, 1539
AsuC2I CCSGG 1 cut(s) 1487
AsuHPI GGTGA 5 cut(s) 4, 848, 977, 1193, 1628
AvaI CYCGRG 1 cut(s) 372
AvaII GGWCC 4 cut(s) 711, 932, 1340, 1539
BalI TGGCCA 3 cut(s) 873, 1452, 1505
BamHI GGATCC 2 cut(s) 1204, 1459
BauI CACGAG 1 cut(s) 485
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 1 cut(s) 1109
BbvI GCAGC 3 cut(s) 216, 335, 1615
BccI CCATC 7 cut(s) 667, 716, 833, 863, 890, 1328, 1484
BciT130I CCWGG 3 cut(s) 141, 1067, 1344
BciVI GTATCC 1 cut(s) 83
BcnI CCSGG 1 cut(s) 1487
BcoDI GTCTC 1 cut(s) 1423
BfaI CTAG 6 cut(s) 35, 585, 597, 617, 1376, 1424
BfmI CTRYAG 2 cut(s) 1335, 1438
BfoI RGCGCY 1 cut(s) 1386
BfuI GTATCC 1 cut(s) 83
BglI GCCNNNNNGGC 1 cut(s) 1491
BisI GCNGC 3 cut(s) 205, 324, 1629
BlsI GCNGC 3 cut(s) 206, 325, 1630
BmcAI AGTACT 1 cut(s) 1499
Bme1390I CCNGG 4 cut(s) 141, 1067, 1344, 1487
Bme18I GGWCC 4 cut(s) 711, 932, 1340, 1539
BmeT110I CYCGRG 1 cut(s) 372
BmgBI CACGTC 2 cut(s) 814, 1417
BmgT120I GGNCC 4 cut(s) 711, 932, 1340, 1539
BmiI GGNNCC 4 cut(s) 516, 549, 1206, 1461
BmrFI CCNGG 4 cut(s) 141, 1067, 1344, 1487
BmsI GCATC 4 cut(s) 205, 262, 686, 1183
BpiI GAAGAC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 708
BpuEI CTTGAG 2 cut(s) 203, 220
BpuMI CCSGG 1 cut(s) 1487
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 1065
BsaWI WCCGGW 2 cut(s) 1323, 1462
BsaXI ACNNNNNCTCC 2 cut(s) 419, 449
Bsc4I CCNNNNNNNGG 1 cut(s) 1326
Bse118I RCCGGY 1 cut(s) 1211
Bse1I ACTGG 1 cut(s) 1506
Bse3DI GCAATG 2 cut(s) 714, 845
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 3 cut(s) 141, 1067, 1344
BseDI CCNNGG 1 cut(s) 1065
BseGI GGATG 4 cut(s) 321, 1075, 1320, 1495
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 1326
BseMI GCAATG 2 cut(s) 714, 845
BseMII CTCAG 3 cut(s) 645, 968, 1182
BseNI ACTGG 1 cut(s) 1506
BseRI GAGGAG 1 cut(s) 398
BseXI GCAGC 3 cut(s) 216, 335, 1615
Bsh1236I CGCG 1 cut(s) 703
BshFI GGCC 5 cut(s) 98, 624, 873, 1452, 1505
BsiHKAI GWGCWC 1 cut(s) 1109
BsiHKCI CYCGRG 1 cut(s) 372
BsiSI CCGG 4 cut(s) 1212, 1324, 1463, 1487
BslFI GGGAC 3 cut(s) 856, 1025, 1427
BslI CCNNNNNNNGG 1 cut(s) 1326
BsmAI GTCTC 1 cut(s) 1423
BsmFI GGGAC 3 cut(s) 856, 1025, 1427
BsmI GAATGC 2 cut(s) 70, 1478
BsnI GGCC 5 cut(s) 98, 624, 873, 1452, 1505
BsoBI CYCGRG 1 cut(s) 372
Bsp1286I GDGCHC 1 cut(s) 1109
Bsp143I GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
BspACI CCGC 5 cut(s) 137, 218, 767, 999, 1081
BspANI GGCC 5 cut(s) 98, 624, 873, 1452, 1505
BspCNI CTCAG 3 cut(s) 644, 969, 1181
BspFNI CGCG 1 cut(s) 703
BspLI GGNNCC 4 cut(s) 516, 549, 1206, 1461
BspPI GGATC 9 cut(s) 264, 429, 498, 742, 1199, 1212, 1454, 1467, 1519
BsrDI GCAATG 2 cut(s) 714, 845
BsrFI RCCGGY 1 cut(s) 1211
BsrI ACTGG 1 cut(s) 1506
BssAI RCCGGY 1 cut(s) 1211
BssECI CCNNGG 1 cut(s) 1065
BssMI GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
BssNAI GTATAC 1 cut(s) 1468
BssSI CACGAG 1 cut(s) 485
Bst1107I GTATAC 1 cut(s) 1468
Bst2BI CACGAG 1 cut(s) 485
Bst2UI CCWGG 3 cut(s) 141, 1067, 1344
Bst4CI ACNGT 4 cut(s) 125, 252, 613, 1368
Bst6I CTCTTC 2 cut(s) 388, 411
BstAPI GCANNNNNTGC 1 cut(s) 764
BstC8I GCNNGC 4 cut(s) 743, 756, 852, 1381
BstDEI CTNAG 3 cut(s) 631, 977, 1168
BstF5I GGATG 4 cut(s) 321, 1075, 1320, 1495
BstFNI CGCG 1 cut(s) 703
BstH2I RGCGCY 1 cut(s) 1386
BstHHI GCGC 3 cut(s) 146, 703, 1385
BstKTI GATC 8 cut(s) 6, 259, 424, 493, 737, 1207, 1462, 1514
BstMAI GTCTC 1 cut(s) 1423
BstMBI GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
BstMWI GCNNNNNNNGC 5 cut(s) 751, 764, 1449, 1491, 1637
BstNI CCWGG 3 cut(s) 141, 1067, 1344
BstNSI RCATGY 3 cut(s) 745, 1130, 1304
BstSCI CCNGG 4 cut(s) 139, 1065, 1342, 1485
BstSFI CTRYAG 2 cut(s) 1335, 1438
BstUI CGCG 1 cut(s) 703
BstV1I GCAGC 3 cut(s) 216, 335, 1615
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 5 cut(s) 256, 734, 1204, 1459, 1511
BstYI RGATCY 5 cut(s) 256, 734, 1204, 1459, 1511
BstZ17I GTATAC 1 cut(s) 1468
BsuI GTATCC 1 cut(s) 83
BsuRI GGCC 5 cut(s) 98, 624, 873, 1452, 1505
BtrI CACGTC 2 cut(s) 814, 1417
BtsCI GGATG 4 cut(s) 321, 1075, 1320, 1495
BtsI GCAGTG 1 cut(s) 991
BtsIMutI CAGTG 3 cut(s) 991, 1110, 1513
Cac8I GCNNGC 4 cut(s) 743, 756, 852, 1381
CfoI GCGC 3 cut(s) 146, 703, 1385
Cfr10I RCCGGY 1 cut(s) 1211
Cfr13I GGNCC 4 cut(s) 711, 932, 1340, 1539
Csp6I GTAC 2 cut(s) 1263, 1498
CviAII CATG 6 cut(s) 223, 651, 742, 1127, 1286, 1301
CviQI GTAC 2 cut(s) 1263, 1498
DdeI CTNAG 3 cut(s) 631, 977, 1168
DpnI GATC 8 cut(s) 5, 258, 423, 492, 736, 1206, 1461, 1513
DpnII GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
DraI TTTAAA 1 cut(s) 774
EaeI YGGCCR 3 cut(s) 871, 1450, 1503
Eam1104I CTCTTC 2 cut(s) 388, 411
EarI CTCTTC 2 cut(s) 388, 411
EciI GGCGGA 2 cut(s) 126, 1096
Eco47I GGWCC 4 cut(s) 711, 932, 1340, 1539
Eco47III AGCGCT 1 cut(s) 1384
Eco57I CTGAAG 1 cut(s) 968
Eco88I CYCGRG 1 cut(s) 372
EcoRII CCWGG 3 cut(s) 139, 1065, 1342
FaeI CATG 6 cut(s) 226, 654, 745, 1130, 1289, 1304
FaqI GGGAC 3 cut(s) 856, 1025, 1427
FatI CATG 6 cut(s) 222, 650, 741, 1126, 1285, 1300
FauNDI CATATG 1 cut(s) 1535
FblI GTMKAC 1 cut(s) 1467
Fnu4HI GCNGC 3 cut(s) 205, 324, 1629
FokI GGATG 4 cut(s) 328, 1082, 1307, 1502
Fsp4HI GCNGC 3 cut(s) 205, 324, 1629
FspBI CTAG 6 cut(s) 35, 585, 597, 617, 1376, 1424
GlaI GCGC 3 cut(s) 145, 702, 1384
GluI GCNGC 3 cut(s) 205, 324, 1629
GsuI CTGGAG 1 cut(s) 708
HaeII RGCGCY 1 cut(s) 1386
HaeIII GGCC 5 cut(s) 98, 624, 873, 1452, 1505
HapII CCGG 4 cut(s) 1212, 1324, 1463, 1487
HhaI GCGC 3 cut(s) 146, 703, 1385
Hin1II CATG 6 cut(s) 226, 654, 745, 1130, 1289, 1304
Hin6I GCGC 3 cut(s) 144, 701, 1383
HinP1I GCGC 3 cut(s) 144, 701, 1383
HinfI GANTC 5 cut(s) 56, 655, 692, 1330, 1394
HpaII CCGG 4 cut(s) 1212, 1324, 1463, 1487
HphI GGTGA 5 cut(s) 4, 848, 977, 1193, 1628
Hpy166II GTNNAC 2 cut(s) 668, 1468
Hpy188I TCNGA 6 cut(s) 604, 634, 948, 978, 1237, 1670
Hpy188III TCNNGA 7 cut(s) 163, 182, 265, 374, 425, 617, 687
Hpy8I GTNNAC 2 cut(s) 668, 1468
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 6 cut(s) 301, 614, 1288, 1540, 1544, 1607
HpyCH4III ACNGT 4 cut(s) 125, 252, 613, 1368
HpyCH4IV ACGT 6 cut(s) 155, 606, 813, 1103, 1416, 1647
HpyF10VI GCNNNNNNNGC 5 cut(s) 751, 764, 1449, 1491, 1637
HpyF3I CTNAG 3 cut(s) 631, 977, 1168
HpySE526I ACGT 6 cut(s) 155, 606, 813, 1103, 1416, 1647
Hsp92II CATG 6 cut(s) 226, 654, 745, 1130, 1289, 1304
HspAI GCGC 3 cut(s) 144, 701, 1383
Kzo9I GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
LmnI GCTCC 2 cut(s) 1063, 1112
Lsp1109I GCAGC 3 cut(s) 216, 335, 1615
LweI GCATC 4 cut(s) 205, 262, 686, 1183
MaeI CTAG 6 cut(s) 35, 585, 597, 617, 1376, 1424
MaeII ACGT 6 cut(s) 155, 606, 813, 1103, 1416, 1647
MaeIII GTNAC 5 cut(s) 44, 151, 607, 814, 1616
MalI GATC 8 cut(s) 5, 258, 423, 492, 736, 1206, 1461, 1513
MboI GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
MboII GAAGA 9 cut(s) 31, 316, 405, 422, 425, 428, 488, 533, 965
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 5 cut(s) 256, 734, 1204, 1459, 1511
MhlI GDGCHC 1 cut(s) 1109
MlsI TGGCCA 3 cut(s) 873, 1452, 1505
MluCI AATT 8 cut(s) 23, 281, 459, 591, 705, 1002, 1046, 1557
MluNI TGGCCA 3 cut(s) 873, 1452, 1505
MlyI GAGTC 3 cut(s) 664, 1339, 1388
MmeI TCCRAC 6 cut(s) 42, 234, 1085, 1120, 1232, 1583
Mox20I TGGCCA 3 cut(s) 873, 1452, 1505
MscI TGGCCA 3 cut(s) 873, 1452, 1505
MseI TTAA 6 cut(s) 773, 905, 917, 1188, 1197, 1305
MslI CAYNNNNRTG 1 cut(s) 1179
Msp20I TGGCCA 3 cut(s) 873, 1452, 1505
MspI CCGG 4 cut(s) 1212, 1324, 1463, 1487
MspR9I CCNGG 4 cut(s) 141, 1067, 1344, 1487
MunI CAATTG 1 cut(s) 1002
Mva1269I GAATGC 2 cut(s) 70, 1478
MvaI CCWGG 3 cut(s) 141, 1067, 1344
MvnI CGCG 1 cut(s) 703
MwoI GCNNNNNNNGC 5 cut(s) 751, 764, 1449, 1491, 1637
NciI CCSGG 1 cut(s) 1487
NdeI CATATG 1 cut(s) 1535
NdeII GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
NlaIII CATG 6 cut(s) 226, 654, 745, 1130, 1289, 1304
NlaIV GGNNCC 4 cut(s) 516, 549, 1206, 1461
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 2 cut(s) 814, 1616
NspI RCATGY 3 cut(s) 745, 1130, 1304
PaeI GCATGC 1 cut(s) 745
PaeR7I CTCGAG 1 cut(s) 372
PciI ACATGT 2 cut(s) 1126, 1300
PctI GAATGC 2 cut(s) 70, 1478
PfeI GAWTC 2 cut(s) 56, 692
PflFI GACNNNGTC 1 cut(s) 1622
PflMI CCANNNNNTGG 1 cut(s) 1326
PkrI GCNGC 3 cut(s) 206, 325, 1630
PleI GAGTC 3 cut(s) 663, 1338, 1388
PpsI GAGTC 3 cut(s) 663, 1338, 1388
PscI ACATGT 2 cut(s) 1126, 1300
PshBI ATTAAT 1 cut(s) 917
Psp6I CCWGG 3 cut(s) 139, 1065, 1342
PspGI CCWGG 3 cut(s) 139, 1065, 1342
PspN4I GGNNCC 4 cut(s) 516, 549, 1206, 1461
PspPI GGNCC 4 cut(s) 711, 932, 1340, 1539
PsuI RGATCY 5 cut(s) 256, 734, 1204, 1459, 1511
PsyI GACNNNGTC 1 cut(s) 1622
RsaI GTAC 2 cut(s) 1264, 1499
RsaNI GTAC 2 cut(s) 1263, 1498
RseI CAYNNNNRTG 1 cut(s) 1179
SaqAI TTAA 6 cut(s) 773, 905, 917, 1188, 1197, 1305
SatI GCNGC 3 cut(s) 205, 324, 1629
Sau3AI GATC 8 cut(s) 3, 256, 421, 490, 734, 1204, 1459, 1511
Sau96I GGNCC 4 cut(s) 711, 932, 1340, 1539
ScaI AGTACT 1 cut(s) 1499
SchI GAGTC 3 cut(s) 664, 1339, 1388
ScrFI CCNGG 4 cut(s) 141, 1067, 1344, 1487
SduI GDGCHC 1 cut(s) 1109
SfaNI GCATC 4 cut(s) 205, 262, 686, 1183
SfcI CTRYAG 2 cut(s) 1335, 1438
Sfr274I CTCGAG 1 cut(s) 372
SinI GGWCC 4 cut(s) 711, 932, 1340, 1539
SlaI CTCGAG 1 cut(s) 372
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 3 cut(s) 182, 199, 372
SmoI CTYRAG 3 cut(s) 182, 199, 372
SphI GCATGC 1 cut(s) 745
Sse9I AATT 8 cut(s) 23, 281, 459, 591, 705, 1002, 1046, 1557
SsiI CCGC 5 cut(s) 137, 218, 767, 999, 1081
SspI AATATT 1 cut(s) 1280
SspMI CTAG 6 cut(s) 35, 585, 597, 617, 1376, 1424
StyD4I CCNGG 4 cut(s) 139, 1065, 1342, 1485
TaaI ACNGT 4 cut(s) 125, 252, 613, 1368
TaiI ACGT 6 cut(s) 158, 609, 816, 1106, 1419, 1650
TaqI TCGA 1 cut(s) 373
TasI AATT 8 cut(s) 23, 281, 459, 591, 705, 1002, 1046, 1557
TatI WGTACW 1 cut(s) 1497
TfiI GAWTC 2 cut(s) 56, 692
Tru1I TTAA 6 cut(s) 773, 905, 917, 1188, 1197, 1305
Tru9I TTAA 6 cut(s) 773, 905, 917, 1188, 1197, 1305
TscAI CASTG 3 cut(s) 991, 1117, 1513
TseFI GTSAC 2 cut(s) 814, 1616
TseI GCWGC 3 cut(s) 204, 323, 1628
Tsp45I GTSAC 2 cut(s) 814, 1616
TspDTI ATGAA 3 cut(s) 332, 489, 1040
TspGWI ACGGA 2 cut(s) 32, 1531
TspRI CASTG 3 cut(s) 991, 1117, 1513
Tth111I GACNNNGTC 1 cut(s) 1622
Van91I CCANNNNNTGG 1 cut(s) 1326
VpaK11BI GGWCC 4 cut(s) 711, 932, 1340, 1539
VspI ATTAAT 1 cut(s) 917
XapI RAATTY 3 cut(s) 591, 705, 1046
XbaI TCTAGA 1 cut(s) 616
XceI RCATGY 3 cut(s) 745, 1130, 1304
XcmI CCANNNNNNNNNTGG 1 cut(s) 1513
XhoI CTCGAG 1 cut(s) 372
XmiI GTMKAC 1 cut(s) 1467
XspI CTAG 6 cut(s) 35, 585, 597, 617, 1376, 1424
ZrmI AGTACT 1 cut(s) 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.