pycom02g14570

F-box-like WD repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
11151428 .. 11157633
6206 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g14570.10

Sequence Viewer

Length: 1701 bp
ATGACCTCTATCACCTCCGTTGAGTTGAATTTCCTCGTCTTCCGTTACCTTCAGGAATCAGGTTTCACGCACTCAGCTTTTGCTTTAGGATATGAGTCCGGTATTAACAAAGGCACTATAGATGGAAATTTGGTTCCACCTGGTGCACTCATTCTATTTATACAAAAAGGACTTCAGTACTTGGAGATGGAAGCTAACTTGAGTAATAGTGATGCAAATTTGGATGAAGATTTCTCATTTTTACAACCTTTAGATCTTATTACAAAGGATGTAAATCAATTGAGGCAAATGATTAAAGAGAAAAGGAAGAATGCACAGAAGGACAAAGACAAAGATAAAGAGCGTGAGTCTTATGAGAAGAAAGATAAAGACAAGGAGCATGAAAATGAACATGAAGGAGAACGTGCACAAGTAAGAGAGAAAGAAAGAAAAGAAAGGGAGAAGGATTTTGAAAAGGATAGAGAGAGGATAGAAAAGAACAAGGAGCGAGAAAAGCAGCCGGAGGACCACAATGACAAAGATGTGGTTAGAGATCAGGAAGATAAAGTTAATGTGAAACATGAAGAAAATGGAGCTTCTAGAGAACCAATGGATATTCCTCTTACAGATGTTGAAATCCCTAGTTCTGATGTGACAATTTTGGAGGGGCATACTAATGAGGTATGTGCTTGTGCATGGAGTCCAGCAGGTTCTCTTCTTGCATCGGGGTCTGGAGATTCAACTGCTCGTATTTGGACCATTGCTGATGGAAGCTCCAGATTTAGTTCACAAAATGGCTCCTCAAATGTGTTGGTGCTGAAGCATGTTAAGGGTAGAACAAATGAAAAGAGCAAAGATGTGACGACACTTGATTGGAATGGAGAGGGAACAATGCTTGCAACCGGATCGTATGATGGGCAAGCAAGAGTTTGGGGTACAAATGGTGAATTAATTAGTACTTTGAGCAAACATAAAGGGCCTATATTCTCACTAAAGTGGAACAAAAAGGGAGATTATCTTCTTACAGGAAGCTGTGATAAAACTGCAATTGTGTGGGATGTAAAGGCAGAGCAATCAAAACAGCAGTTCGAATTTCATTCTGGTCCAACACTCGATGTTGATTGGCGCAACAATGTATCCTTTGCAATGAGCTCAACAGACAATATGATATATGTCTGCAAGATTGGGGAAAACCACCCTATTAAAACTTTTGCAGGACATCAGGGAGAAGTTAATTGTGTTAAATGGGATCCAACAGGTTCATTGTTGGCTTCATGTTCTGACGATATCAGTGCAAAGATATGGAGCATGAAGCAGGAAAAGTATGTTCATGATTTGAGAGAGCATTCTAAGGAGATATACACTATCAGGTGGAGTCCGACTGGGCCAGGAACAAACAACCCTAACCAACAGTTATATCTGGCAAGTGCTTCATTCGACTCCACTGTGAAGCTATGGGATGTGGAACAAGGAAAACTTATGTGCAGCTTGGATGGACACAGGGAACCTGTTTATTCTGTTGCTTTTAGCCCAAACGGTGAGTATTTGGCCAGTGGATCTCTTGATAAATCGATGCATATATGGTCACTGAAGGAAGGCAAGATTGTGAAAACGTACACTGGAAGTGGCGGTATATTTGAAGTCTGCTGGAACAAGGAAGGCGACAAACTTGCTGCATGTTTTGCCAACAACACAGTCTGCGTTTTGGATTTTAGAGTCTAG

Protein Analysis

567

Amino Acids

63.65

Weight (kDa)

5.48

Isoelectric Point (pI)

28.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 677
AciI CCGC 1 cut(s) 1608
AclWI GGATC 4 cut(s) 892, 1223, 1236, 1543
AcoI YGGCCR 1 cut(s) 1527
AcsI RAATTY 4 cut(s) 28, 127, 217, 1070
AcuI CTGAAG 4 cut(s) 35, 158, 818, 1589
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 4 cut(s) 179, 916, 937, 1595
AgsI TTSAA 5 cut(s) 28, 452, 614, 720, 1619
AjnI CCWGG 2 cut(s) 139, 1366
AleI CACNNNNGTG 1 cut(s) 973
AloI GAACNNNNNNTCC 2 cut(s) 117, 149
AluBI AGCT 8 cut(s) 77, 194, 575, 753, 1011, 1131, 1432, 1467
AluI AGCT 8 cut(s) 77, 194, 575, 753, 1011, 1131, 1432, 1467
Alw21I GWGCWC 3 cut(s) 148, 409, 1133
Alw44I GTGCAC 2 cut(s) 144, 405
AlwI GGATC 4 cut(s) 892, 1223, 1236, 1543
AoxI GGCC 3 cut(s) 956, 1364, 1527
ApaLI GTGCAC 2 cut(s) 144, 405
ApeKI GCWGC 3 cut(s) 496, 1464, 1652
ApoI RAATTY 4 cut(s) 28, 127, 217, 1070
AseI ATTAAT 1 cut(s) 929
AspLEI GCGC 1 cut(s) 1107
AspS9I GGNCC 5 cut(s) 505, 735, 956, 1082, 1364
AsuHPI GGTGA 3 cut(s) 4, 935, 1529
AsuII TTCGAA 1 cut(s) 1068
AvaII GGWCC 3 cut(s) 505, 735, 1082
BaeGI GKGCMC 2 cut(s) 148, 409
BalI TGGCCA 1 cut(s) 1529
BamHI GGATCC 1 cut(s) 1228
BanII GRGCYC 1 cut(s) 1133
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 3 cut(s) 148, 409, 1133
BbvI GCAGC 3 cut(s) 508, 1476, 1639
BccI CCATC 5 cut(s) 116, 181, 740, 887, 1466
BcgI CGANNNNNNTGC 6 cut(s) 867, 901, 1253, 1287, 1631, 1665
BciT130I CCWGG 2 cut(s) 141, 1368
BciVI GTATCC 1 cut(s) 1126
BfaI CTAG 3 cut(s) 579, 621, 1699
BfmI CTRYAG 1 cut(s) 117
BfuAI ACCTGC 1 cut(s) 677
BfuI GTATCC 1 cut(s) 1126
BglII AGATCT 1 cut(s) 253
BisI GCNGC 3 cut(s) 497, 1465, 1653
BlsI GCNGC 3 cut(s) 498, 1466, 1654
BmcAI AGTACT 2 cut(s) 179, 937
Bme1390I CCNGG 2 cut(s) 141, 1368
Bme18I GGWCC 3 cut(s) 505, 735, 1082
BmgT120I GGNCC 5 cut(s) 505, 735, 956, 1082, 1364
BmiI GGNNCC 4 cut(s) 135, 778, 1230, 1485
BmrFI CCNGG 2 cut(s) 141, 1368
BmrI ACTGGG 1 cut(s) 1371
BmsI GCATC 3 cut(s) 202, 710, 1542
BmuI ACTGGG 1 cut(s) 1371
BpiI GAAGAC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 732, 739
Bpu14I TTCGAA 1 cut(s) 1068
BpuEI CTTGAG 1 cut(s) 220
Bsa29I ATCGAT 1 cut(s) 1550
BsaBI GATNNNNATC 1 cut(s) 273
BsaWI WCCGGW 2 cut(s) 98, 881
Bse1I ACTGG 3 cut(s) 1366, 1530, 1603
Bse3DI GCAATG 2 cut(s) 738, 1131
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 2 cut(s) 141, 1368
BseCI ATCGAT 1 cut(s) 1550
BseGI GGATG 5 cut(s) 229, 274, 1042, 1444, 1477
BseJI GATNNNNATC 1 cut(s) 273
BseMI GCAATG 2 cut(s) 738, 1131
BseMII CTCAG 1 cut(s) 87
BseNI ACTGG 3 cut(s) 1366, 1530, 1603
BseRI GAGGAG 1 cut(s) 769
BseSI GKGCMC 2 cut(s) 148, 409
BseXI GCAGC 3 cut(s) 508, 1476, 1639
BsgI GTGCAG 1 cut(s) 1483
BshFI GGCC 3 cut(s) 958, 1366, 1529
BshVI ATCGAT 1 cut(s) 1550
BsiHKAI GWGCWC 3 cut(s) 148, 409, 1133
BsiSI CCGG 3 cut(s) 99, 500, 882
BsmI GAATGC 2 cut(s) 316, 1324
BsnI GGCC 3 cut(s) 958, 1366, 1529
Bsp119I TTCGAA 1 cut(s) 1068
Bsp1286I GDGCHC 3 cut(s) 148, 409, 1133
Bsp143I GATC 5 cut(s) 253, 532, 884, 1228, 1535
BspACI CCGC 1 cut(s) 1608
BspANI GGCC 3 cut(s) 958, 1366, 1529
BspCNI CTCAG 1 cut(s) 86
BspDI ATCGAT 1 cut(s) 1550
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 4 cut(s) 135, 778, 1230, 1485
BspMI ACCTGC 1 cut(s) 677
BspPI GGATC 4 cut(s) 892, 1223, 1236, 1543
BspT104I TTCGAA 1 cut(s) 1068
BsrDI GCAATG 2 cut(s) 738, 1131
BsrI ACTGG 3 cut(s) 1366, 1530, 1603
BssMI GATC 5 cut(s) 253, 532, 884, 1228, 1535
Bst2UI CCWGG 2 cut(s) 141, 1368
Bst4CI ACNGT 4 cut(s) 1392, 1426, 1517, 1675
Bst6I CTCTTC 1 cut(s) 699
BstAPI GCANNNNNTGC 1 cut(s) 1661
BstBI TTCGAA 1 cut(s) 1068
BstC8I GCNNGC 2 cut(s) 876, 900
BstDEI CTNAG 2 cut(s) 73, 1329
BstF5I GGATG 5 cut(s) 229, 274, 1042, 1444, 1477
BstHHI GCGC 1 cut(s) 1107
BstKTI GATC 5 cut(s) 256, 535, 887, 1231, 1538
BstMBI GATC 5 cut(s) 253, 532, 884, 1228, 1535
BstMWI GCNNNNNNNGC 2 cut(s) 493, 1661
BstNI CCWGG 2 cut(s) 141, 1368
BstNSI RCATGY 2 cut(s) 806, 1659
BstSCI CCNGG 2 cut(s) 139, 1366
BstSFI CTRYAG 1 cut(s) 117
BstSLI GKGCMC 2 cut(s) 148, 409
BstV1I GCAGC 3 cut(s) 508, 1476, 1639
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 3 cut(s) 253, 1228, 1535
BstYI RGATCY 3 cut(s) 253, 1228, 1535
Bsu15I ATCGAT 1 cut(s) 1550
BsuI GTATCC 1 cut(s) 1126
BsuRI GGCC 3 cut(s) 958, 1366, 1529
BsuTUI ATCGAT 1 cut(s) 1550
BtsCI GGATG 5 cut(s) 229, 274, 1042, 1444, 1477
BtsIMutI CAGTG 5 cut(s) 1276, 1422, 1537, 1565, 1596
BveI ACCTGC 1 cut(s) 677
Cac8I GCNNGC 2 cut(s) 876, 900
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 1 cut(s) 1107
Cfr13I GGNCC 5 cut(s) 505, 735, 956, 1082, 1364
ClaI ATCGAT 1 cut(s) 1550
CsiI ACCWGGT 1 cut(s) 139
Csp6I GTAC 4 cut(s) 178, 915, 936, 1594
CviAII CATG 9 cut(s) 380, 392, 560, 675, 803, 1254, 1288, 1310, 1656
CviQI GTAC 4 cut(s) 178, 915, 936, 1594
DdeI CTNAG 2 cut(s) 73, 1329
DpnI GATC 5 cut(s) 255, 534, 886, 1230, 1537
DpnII GATC 5 cut(s) 253, 532, 884, 1228, 1535
DraIII CACNNNGTG 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 1527
Eam1104I CTCTTC 1 cut(s) 699
EarI CTCTTC 1 cut(s) 699
Ecl136II GAGCTC 1 cut(s) 1131
Eco24I GRGCYC 1 cut(s) 1133
Eco32I GATATC 1 cut(s) 1267
Eco47I GGWCC 3 cut(s) 505, 735, 1082
Eco53kI GAGCTC 1 cut(s) 1131
Eco57I CTGAAG 4 cut(s) 35, 158, 818, 1589
EcoICRI GAGCTC 1 cut(s) 1131
EcoO109I RGGNCCY 1 cut(s) 956
EcoRII CCWGG 2 cut(s) 139, 1366
EcoRV GATATC 1 cut(s) 1267
EcoT22I ATGCAT 1 cut(s) 1557
EcoT38I GRGCYC 1 cut(s) 1133
FaeI CATG 9 cut(s) 383, 395, 563, 678, 806, 1257, 1291, 1313, 1659
FalI AAGNNNNNCTT 2 cut(s) 1440, 1472
FatI CATG 9 cut(s) 379, 391, 559, 674, 802, 1253, 1287, 1309, 1655
Fnu4HI GCNGC 3 cut(s) 497, 1465, 1653
FokI GGATG 5 cut(s) 236, 281, 1049, 1451, 1484
FriOI GRGCYC 1 cut(s) 1133
Fsp4HI GCNGC 3 cut(s) 497, 1465, 1653
FspBI CTAG 3 cut(s) 579, 621, 1699
GlaI GCGC 1 cut(s) 1106
GluI GCNGC 3 cut(s) 497, 1465, 1653
GsuI CTGGAG 2 cut(s) 732, 739
HaeIII GGCC 3 cut(s) 958, 1366, 1529
HapII CCGG 3 cut(s) 99, 500, 882
HhaI GCGC 1 cut(s) 1107
Hin1II CATG 9 cut(s) 383, 395, 563, 678, 806, 1257, 1291, 1313, 1659
Hin6I GCGC 1 cut(s) 1105
HinP1I GCGC 1 cut(s) 1105
HinfI GANTC 8 cut(s) 56, 95, 347, 679, 716, 1354, 1418, 1695
HpaII CCGG 3 cut(s) 99, 500, 882
HphI GGTGA 3 cut(s) 4, 935, 1529
Hpy166II GTNNAC 4 cut(s) 146, 407, 767, 1596
Hpy188I TCNGA 3 cut(s) 628, 1261, 1359
Hpy188III TCNNGA 7 cut(s) 53, 536, 579, 711, 756, 1310, 1541
Hpy8I GTNNAC 4 cut(s) 146, 407, 767, 1596
HpyAV CCTTC 7 cut(s) 59, 313, 389, 436, 1564, 1568, 1631
HpyCH4III ACNGT 4 cut(s) 1392, 1426, 1517, 1675
HpyCH4IV ACGT 2 cut(s) 403, 1592
HpyF10VI GCNNNNNNNGC 2 cut(s) 493, 1661
HpyF3I CTNAG 2 cut(s) 73, 1329
HpySE526I ACGT 2 cut(s) 403, 1592
Hsp92II CATG 9 cut(s) 383, 395, 563, 678, 806, 1257, 1291, 1313, 1659
HspAI GCGC 1 cut(s) 1105
Kzo9I GATC 5 cut(s) 253, 532, 884, 1228, 1535
LmnI GCTCC 6 cut(s) 376, 484, 572, 758, 782, 1284
Lsp1109I GCAGC 3 cut(s) 508, 1476, 1639
LweI GCATC 3 cut(s) 202, 710, 1542
MabI ACCWGGT 1 cut(s) 139
MaeI CTAG 3 cut(s) 579, 621, 1699
MaeII ACGT 2 cut(s) 403, 1592
MaeIII GTNAC 4 cut(s) 44, 631, 838, 1563
MalI GATC 5 cut(s) 255, 534, 886, 1230, 1537
MboI GATC 5 cut(s) 253, 532, 884, 1228, 1535
MboII GAAGA 8 cut(s) 31, 239, 319, 370, 551, 575, 686, 989
MfeI CAATTG 2 cut(s) 278, 1026
MflI RGATCY 3 cut(s) 253, 1228, 1535
MhlI GDGCHC 3 cut(s) 148, 409, 1133
MlsI TGGCCA 1 cut(s) 1529
MluNI TGGCCA 1 cut(s) 1529
MlyI GAGTC 5 cut(s) 104, 356, 688, 1363, 1412
MmeI TCCRAC 3 cut(s) 1109, 1256, 1382
Mox20I TGGCCA 1 cut(s) 1529
Mph1103I ATGCAT 1 cut(s) 1557
MscI TGGCCA 1 cut(s) 1529
MseI TTAA 8 cut(s) 105, 294, 549, 807, 929, 1182, 1212, 1221
MslI CAYNNNNRTG 3 cut(s) 384, 654, 973
Msp20I TGGCCA 1 cut(s) 1529
MspI CCGG 3 cut(s) 99, 500, 882
MspR9I CCNGG 2 cut(s) 141, 1368
MunI CAATTG 2 cut(s) 278, 1026
Mva1269I GAATGC 2 cut(s) 316, 1324
MvaI CCWGG 2 cut(s) 141, 1368
MwoI GCNNNNNNNGC 2 cut(s) 493, 1661
NdeII GATC 5 cut(s) 253, 532, 884, 1228, 1535
NlaIII CATG 9 cut(s) 383, 395, 563, 678, 806, 1257, 1291, 1313, 1659
NlaIV GGNNCC 4 cut(s) 135, 778, 1230, 1485
NmuCI GTSAC 3 cut(s) 631, 838, 1563
NsiI ATGCAT 1 cut(s) 1557
NspI RCATGY 2 cut(s) 806, 1659
NspV TTCGAA 1 cut(s) 1068
OliI CACNNNNGTG 1 cut(s) 973
PagI TCATGA 1 cut(s) 1309
PctI GAATGC 2 cut(s) 316, 1324
PfeI GAWTC 2 cut(s) 56, 716
PkrI GCNGC 3 cut(s) 498, 1466, 1654
PleI GAGTC 5 cut(s) 103, 355, 687, 1362, 1412
PpsI GAGTC 5 cut(s) 103, 355, 687, 1362, 1412
PshBI ATTAAT 1 cut(s) 929
Psp124BI GAGCTC 1 cut(s) 1133
Psp6I CCWGG 2 cut(s) 139, 1366
PspGI CCWGG 2 cut(s) 139, 1366
PspN4I GGNNCC 4 cut(s) 135, 778, 1230, 1485
PspPI GGNCC 5 cut(s) 505, 735, 956, 1082, 1364
PsuI RGATCY 3 cut(s) 253, 1228, 1535
RsaI GTAC 4 cut(s) 179, 916, 937, 1595
RsaNI GTAC 4 cut(s) 178, 915, 936, 1594
RseI CAYNNNNRTG 3 cut(s) 384, 654, 973
SacI GAGCTC 1 cut(s) 1133
SaqAI TTAA 8 cut(s) 105, 294, 549, 807, 929, 1182, 1212, 1221
SatI GCNGC 3 cut(s) 497, 1465, 1653
Sau3AI GATC 5 cut(s) 253, 532, 884, 1228, 1535
Sau96I GGNCC 5 cut(s) 505, 735, 956, 1082, 1364
ScaI AGTACT 2 cut(s) 179, 937
SchI GAGTC 5 cut(s) 104, 356, 688, 1363, 1412
ScrFI CCNGG 2 cut(s) 141, 1368
SduI GDGCHC 3 cut(s) 148, 409, 1133
SexAI ACCWGGT 1 cut(s) 139
SfaNI GCATC 3 cut(s) 202, 710, 1542
SfcI CTRYAG 1 cut(s) 117
SfuI TTCGAA 1 cut(s) 1068
SinI GGWCC 3 cut(s) 505, 735, 1082
SmiMI CAYNNNNRTG 3 cut(s) 384, 654, 973
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
SsiI CCGC 1 cut(s) 1608
SspMI CTAG 3 cut(s) 579, 621, 1699
SstI GAGCTC 1 cut(s) 1133
StyD4I CCNGG 2 cut(s) 139, 1366
TaaI ACNGT 4 cut(s) 1392, 1426, 1517, 1675
TaiI ACGT 2 cut(s) 406, 1595
TaqI TCGA 4 cut(s) 1068, 1092, 1416, 1550
TatI WGTACW 2 cut(s) 177, 935
TfiI GAWTC 2 cut(s) 56, 716
Tru1I TTAA 8 cut(s) 105, 294, 549, 807, 929, 1182, 1212, 1221
Tru9I TTAA 8 cut(s) 105, 294, 549, 807, 929, 1182, 1212, 1221
TscAI CASTG 5 cut(s) 1276, 1429, 1537, 1572, 1603
TseFI GTSAC 3 cut(s) 631, 838, 1563
TseI GCWGC 3 cut(s) 496, 1464, 1652
Tsp45I GTSAC 3 cut(s) 631, 838, 1563
TspGWI ACGGA 2 cut(s) 7, 32
TspRI CASTG 5 cut(s) 1276, 1429, 1537, 1572, 1603
VneI GTGCAC 2 cut(s) 144, 405
VpaK11BI GGWCC 3 cut(s) 505, 735, 1082
VspI ATTAAT 1 cut(s) 929
XapI RAATTY 4 cut(s) 28, 127, 217, 1070
XbaI TCTAGA 1 cut(s) 578
XceI RCATGY 2 cut(s) 806, 1659
XspI CTAG 3 cut(s) 579, 621, 1699
ZrmI AGTACT 2 cut(s) 179, 937
Zsp2I ATGCAT 1 cut(s) 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.