Rmu_sc0007106.1_g000002

F-box-like WD repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007106.1
Physical Location & Seq
Reverse (-)
2146 .. 8737
6592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007106.1_g000002.1.cds

Sequence Viewer

Length: 1713 bp
atgacctccatcacctccgtcgagctcaatttcctcgtcttccgttatcttcaggaatcaggcttcacacactcggcttttgctctaggatatgaggccggtattaacaaatgcactatggatggaaatttgattccacccggtgctctcattacatttgttcaaaaagggcttcagtacttggagatggaagccaacttgagtaatagtgatgcagaggtggatgaggatttctctcttttacaacctttagatctcatccaaaatgatgttaatcaactacgccaattgataaaagatagaaagaaaaatttgcagaaggatagagataaggacaaagaccttgagaaagaacatgaaggagagcgtacacgagtaagagagaaggaaagactagaaagggagaaggaatttgaaaagagcagagagagggtagaaaagaataaggagctagaaaagaataaggaggtagaaaagaacaaggagcaagaaaagcatcatgaggaccataacgacagagatagggctacagaacaggaagaaaaagtcaatgtcaaacatgaagaaaatggagcttctgcagaaccaatggatatctcgacagcttcaacatctcaggcatgtgaaatccctagttctgatgtgaccattctagaaggccatacatctgaggtctgtgcttgtgcttggagtccaactggatctcttcttgcatctgggtctggagattctacagctcgcatttggccaattccagatggaagctctagatctggtttacaaaatggtgctttaaatgtgttggtgctaaagcatgttaagggtagaacaaatgaaaagagtaaagatgtcacgactcttgattggaatggagagggaacactgcttgcaactggctcatatgatgggcaggcaagaatttggagtacaaatggtgaactaaggagtactttgaacaaacataaaggtcccatattctctctaaagtggaacaagaagggagattatctgctaacgggaagttgtgataaaactgcaattgtgtgggatgtgaaggcagaggaagtgaagcaacaatttgagtttcattcaggtccaacacttgatgttgattggcgcaacaatatgcaatttgcaatgagctccacagacaatatgatatatgtttgcaagattggagaaaatcgccctattaaaacttttgcaggacatcagggtgaagttaattgtgtgaaatgggatccaactggcacgctgttggcttcatgttctgatgatatcagtgcaaagatatggagcatgaagcaggaaaagtatgttcatgatttaagagagcattctaaggagatatacactatcagatggagtccaacaggaccaggaacaaacaaccctaaccagcagttggttctggcaagtgcgtcatttgactctactgtaaagctatgggatgtggaactaggaaaacttctctacagcttgaatggacacagggatcctgtttattccgtcgcctttagcccaaatggtgagtatttggccagtggatctcttgataaatcaatgcatatctggtcactaaaggaaggcaagattgtgaaaacatacaccggcaatggcggtatatttgaagtttgctggaacaaggaaggtgacaaaattgctgcatgttttgccaacaacacagtctgtgttttggatttcagaatgtga

Protein Analysis

570

Amino Acids

64.1

Weight (kDa)

5.54

Isoelectric Point (pI)

30.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1405
AciI CCGC 1 cut(s) 1620
AclWI GGATC 6 cut(s) 709, 1235, 1248, 1490, 1503, 1555
AcoI YGGCCR 2 cut(s) 746, 1539
AcsI RAATTY 4 cut(s) 127, 310, 410, 918
AcuI CTGAAG 2 cut(s) 35, 158
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 4 cut(s) 179, 370, 928, 949
AfiI CCNNNNNNNGG 1 cut(s) 1405
AgsI TTSAA 6 cut(s) 164, 416, 609, 955, 1483, 1631
AjnI CCWGG 1 cut(s) 1378
AluBI AGCT 9 cut(s) 25, 451, 575, 605, 737, 765, 1143, 1444, 1479
AluI AGCT 9 cut(s) 25, 451, 575, 605, 737, 765, 1143, 1444, 1479
Alw21I GWGCWC 3 cut(s) 27, 148, 1145
AlwI GGATC 6 cut(s) 709, 1235, 1248, 1490, 1503, 1555
AoxI GGCC 4 cut(s) 96, 658, 746, 1539
ApeKI GCWGC 1 cut(s) 1664
ApoI RAATTY 4 cut(s) 127, 310, 410, 918
AspLEI GCGC 1 cut(s) 1119
AspS9I GGNCC 4 cut(s) 505, 968, 1094, 1376
AsuC2I CCSGG 1 cut(s) 141
AsuHPI GGTGA 5 cut(s) 4, 947, 1229, 1541, 1664
AvaII GGWCC 4 cut(s) 505, 968, 1094, 1376
BalI TGGCCA 2 cut(s) 748, 1541
BamHI GGATCC 2 cut(s) 1240, 1495
BanII GRGCYC 2 cut(s) 27, 1145
BauI CACGAG 1 cut(s) 372
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 3 cut(s) 27, 148, 1145
BbvI GCAGC 1 cut(s) 1651
BccI CCATC 6 cut(s) 17, 116, 181, 752, 899, 1356
BciT130I CCWGG 1 cut(s) 1380
BcnI CCSGG 1 cut(s) 141
BfaI CTAG 7 cut(s) 86, 395, 452, 633, 653, 768, 1460
BfmI CTRYAG 4 cut(s) 528, 579, 732, 1474
BglII AGATCT 2 cut(s) 253, 770
BisI GCNGC 1 cut(s) 1665
BlsI GCNGC 1 cut(s) 1666
BmcAI AGTACT 2 cut(s) 179, 949
Bme1390I CCNGG 2 cut(s) 141, 1380
Bme18I GGWCC 4 cut(s) 505, 968, 1094, 1376
BmgT120I GGNCC 4 cut(s) 505, 968, 1094, 1376
BmiI GGNNCC 3 cut(s) 970, 1242, 1497
BmrFI CCNGG 2 cut(s) 141, 1380
BmsI GCATC 3 cut(s) 202, 505, 722
BpiI GAAGAC 1 cut(s) 31
BplI GAGNNNNNCTC 2 cut(s) 218, 250
BpmI CTGGAG 1 cut(s) 744
BpuEI CTTGAG 2 cut(s) 220, 365
BpuMI CCSGG 1 cut(s) 141
BsaBI GATNNNNATC 1 cut(s) 273
Bsc4I CCNNNNNNNGG 1 cut(s) 1405
Bse118I RCCGGY 2 cut(s) 98, 1610
Bse1I ACTGG 4 cut(s) 703, 898, 1252, 1542
Bse3DI GCAATG 2 cut(s) 1143, 1621
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 1 cut(s) 1380
BseGI GGATG 5 cut(s) 127, 229, 258, 1054, 1456
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 1 cut(s) 1405
BseMI GCAATG 2 cut(s) 1143, 1621
BseMII CTCAG 2 cut(s) 629, 660
BseNI ACTGG 4 cut(s) 703, 898, 1252, 1542
BseXI GCAGC 1 cut(s) 1651
BshFI GGCC 4 cut(s) 98, 660, 748, 1541
BsiHKAI GWGCWC 3 cut(s) 27, 148, 1145
BsiSI CCGG 3 cut(s) 99, 141, 1611
BslFI GGGAC 1 cut(s) 954
BslI CCNNNNNNNGG 1 cut(s) 1405
BsmFI GGGAC 1 cut(s) 954
BsmI GAATGC 1 cut(s) 1336
BsnI GGCC 4 cut(s) 98, 660, 748, 1541
Bsp1286I GDGCHC 3 cut(s) 27, 148, 1145
Bsp143I GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
BspACI CCGC 1 cut(s) 1620
BspANI GGCC 4 cut(s) 98, 660, 748, 1541
BspCNI CTCAG 2 cut(s) 628, 661
BspHI TCATGA 2 cut(s) 499, 1321
BspLI GGNNCC 3 cut(s) 970, 1242, 1497
BspMAI CTGCAG 1 cut(s) 583
BspPI GGATC 6 cut(s) 709, 1235, 1248, 1490, 1503, 1555
BsrDI GCAATG 2 cut(s) 1143, 1621
BsrFI RCCGGY 2 cut(s) 98, 1610
BsrI ACTGG 4 cut(s) 703, 898, 1252, 1542
BssAI RCCGGY 2 cut(s) 98, 1610
BssMI GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
BssSI CACGAG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 1380
Bst4CI ACNGT 2 cut(s) 1438, 1687
Bst6I CTCTTC 1 cut(s) 711
BstAPI GCANNNNNTGC 1 cut(s) 1673
BstC8I GCNNGC 4 cut(s) 739, 888, 912, 1253
BstDEI CTNAG 4 cut(s) 615, 669, 941, 1341
BstF5I GGATG 5 cut(s) 127, 229, 258, 1054, 1456
BstHHI GCGC 1 cut(s) 1119
BstKTI GATC 6 cut(s) 256, 704, 773, 1243, 1498, 1550
BstMBI GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
BstMWI GCNNNNNNNGC 2 cut(s) 493, 1673
BstNI CCWGG 1 cut(s) 1380
BstNSI RCATGY 3 cut(s) 624, 818, 1671
BstSCI CCNGG 2 cut(s) 139, 1378
BstSFI CTRYAG 4 cut(s) 528, 579, 732, 1474
BstV1I GCAGC 1 cut(s) 1651
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 6 cut(s) 253, 701, 770, 1240, 1495, 1547
BstYI RGATCY 6 cut(s) 253, 701, 770, 1240, 1495, 1547
BsuRI GGCC 4 cut(s) 98, 660, 748, 1541
BtsCI GGATG 5 cut(s) 127, 229, 258, 1054, 1456
BtsI GCAGTG 1 cut(s) 881
BtsIMutI CAGTG 3 cut(s) 881, 1288, 1549
Cac8I GCNNGC 4 cut(s) 739, 888, 912, 1253
CciI TCATGA 2 cut(s) 499, 1321
CfoI GCGC 1 cut(s) 1119
Cfr10I RCCGGY 2 cut(s) 98, 1610
Cfr13I GGNCC 4 cut(s) 505, 968, 1094, 1376
CseI GACGC 1 cut(s) 1410
Csp6I GTAC 4 cut(s) 178, 369, 927, 948
CviAII CATG 9 cut(s) 356, 500, 560, 621, 815, 1266, 1300, 1322, 1668
CviQI GTAC 4 cut(s) 178, 369, 927, 948
DdeI CTNAG 4 cut(s) 615, 669, 941, 1341
DpnI GATC 6 cut(s) 255, 703, 772, 1242, 1497, 1549
DpnII GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
DraI TTTAAA 1 cut(s) 795
DraIII CACNNNGTG 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 746, 1539
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
Ecl136II GAGCTC 2 cut(s) 25, 1143
Eco24I GRGCYC 2 cut(s) 27, 1145
Eco32I GATATC 2 cut(s) 595, 1279
Eco47I GGWCC 4 cut(s) 505, 968, 1094, 1376
Eco53kI GAGCTC 2 cut(s) 25, 1143
Eco57I CTGAAG 2 cut(s) 35, 158
EcoICRI GAGCTC 2 cut(s) 25, 1143
EcoO109I RGGNCCY 1 cut(s) 968
EcoRII CCWGG 1 cut(s) 1378
EcoRV GATATC 2 cut(s) 595, 1279
EcoT22I ATGCAT 1 cut(s) 1569
EcoT38I GRGCYC 2 cut(s) 27, 1145
FaeI CATG 9 cut(s) 359, 503, 563, 624, 818, 1269, 1303, 1325, 1671
FalI AAGNNNNNCTT 2 cut(s) 934, 966
FaqI GGGAC 1 cut(s) 954
FatI CATG 9 cut(s) 355, 499, 559, 620, 814, 1265, 1299, 1321, 1667
FauNDI CATATG 1 cut(s) 901
Fnu4HI GCNGC 1 cut(s) 1665
FokI GGATG 5 cut(s) 134, 236, 245, 1061, 1463
FriOI GRGCYC 2 cut(s) 27, 1145
Fsp4HI GCNGC 1 cut(s) 1665
FspBI CTAG 7 cut(s) 86, 395, 452, 633, 653, 768, 1460
GlaI GCGC 1 cut(s) 1118
GluI GCNGC 1 cut(s) 1665
GsuI CTGGAG 1 cut(s) 744
HaeIII GGCC 4 cut(s) 98, 660, 748, 1541
HapII CCGG 3 cut(s) 99, 141, 1611
HgaI GACGC 1 cut(s) 1410
HhaI GCGC 1 cut(s) 1119
Hin1II CATG 9 cut(s) 359, 503, 563, 624, 818, 1269, 1303, 1325, 1671
Hin6I GCGC 1 cut(s) 1117
HinP1I GCGC 1 cut(s) 1117
HinfI GANTC 7 cut(s) 56, 133, 691, 728, 856, 1366, 1430
HpaII CCGG 3 cut(s) 99, 141, 1611
HphI GGTGA 5 cut(s) 4, 947, 1229, 1541, 1664
Hpy166II GTNNAC 3 cut(s) 371, 779, 938
Hpy188I TCNGA 5 cut(s) 640, 670, 1273, 1361, 1706
Hpy8I GTNNAC 3 cut(s) 371, 779, 938
Hpy99I CGWCG 2 cut(s) 23, 1514
HpyAV CCTTC 9 cut(s) 313, 353, 379, 400, 650, 991, 1048, 1580, 1643
HpyCH4III ACNGT 2 cut(s) 1438, 1687
HpyF10VI GCNNNNNNNGC 2 cut(s) 493, 1673
HpyF3I CTNAG 4 cut(s) 615, 669, 941, 1341
Hsp92II CATG 9 cut(s) 359, 503, 563, 624, 818, 1269, 1303, 1325, 1671
HspAI GCGC 1 cut(s) 1117
Kzo9I GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
LmnI GCTCC 5 cut(s) 448, 484, 572, 1148, 1296
Lsp1109I GCAGC 1 cut(s) 1651
LweI GCATC 3 cut(s) 202, 505, 722
MaeI CTAG 7 cut(s) 86, 395, 452, 633, 653, 768, 1460
MaeIII GTNAC 4 cut(s) 643, 850, 1575, 1652
MalI GATC 6 cut(s) 255, 703, 772, 1242, 1497, 1549
MboI GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
MboII GAAGA 5 cut(s) 31, 41, 551, 575, 698
MfeI CAATTG 2 cut(s) 287, 1038
MflI RGATCY 6 cut(s) 253, 701, 770, 1240, 1495, 1547
MhlI GDGCHC 3 cut(s) 27, 148, 1145
MlsI TGGCCA 2 cut(s) 748, 1541
MluNI TGGCCA 2 cut(s) 748, 1541
MlyI GAGTC 4 cut(s) 700, 850, 1375, 1424
MmeI TCCRAC 4 cut(s) 719, 1121, 1268, 1394
Mox20I TGGCCA 2 cut(s) 748, 1541
Mph1103I ATGCAT 1 cut(s) 1569
MscI TGGCCA 2 cut(s) 748, 1541
MseI TTAA 7 cut(s) 105, 273, 794, 819, 1194, 1224, 1328
MslI CAYNNNNRTG 1 cut(s) 1215
Msp20I TGGCCA 2 cut(s) 748, 1541
MspI CCGG 3 cut(s) 99, 141, 1611
MspR9I CCNGG 2 cut(s) 141, 1380
MunI CAATTG 2 cut(s) 287, 1038
Mva1269I GAATGC 1 cut(s) 1336
MvaI CCWGG 1 cut(s) 1380
MwoI GCNNNNNNNGC 2 cut(s) 493, 1673
NciI CCSGG 1 cut(s) 141
NdeI CATATG 1 cut(s) 901
NdeII GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
NlaIII CATG 9 cut(s) 359, 503, 563, 624, 818, 1269, 1303, 1325, 1671
NlaIV GGNNCC 3 cut(s) 970, 1242, 1497
NmeAIII GCCGAG 1 cut(s) 53
NmuCI GTSAC 4 cut(s) 643, 850, 1575, 1652
NsiI ATGCAT 1 cut(s) 1569
NspI RCATGY 3 cut(s) 624, 818, 1671
PagI TCATGA 2 cut(s) 499, 1321
PctI GAATGC 1 cut(s) 1336
PfeI GAWTC 3 cut(s) 56, 133, 728
PflMI CCANNNNNTGG 1 cut(s) 1405
PkrI GCNGC 1 cut(s) 1666
PleI GAGTC 4 cut(s) 699, 850, 1374, 1424
PpsI GAGTC 4 cut(s) 699, 850, 1374, 1424
PpuMI RGGWCCY 1 cut(s) 968
Psp124BI GAGCTC 2 cut(s) 27, 1145
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 1 cut(s) 1378
PspGI CCWGG 1 cut(s) 1378
PspN4I GGNNCC 3 cut(s) 970, 1242, 1497
PspPI GGNCC 4 cut(s) 505, 968, 1094, 1376
PspPPI RGGWCCY 1 cut(s) 968
PstI CTGCAG 1 cut(s) 583
PsuI RGATCY 6 cut(s) 253, 701, 770, 1240, 1495, 1547
RsaI GTAC 4 cut(s) 179, 370, 928, 949
RsaNI GTAC 4 cut(s) 178, 369, 927, 948
RseI CAYNNNNRTG 1 cut(s) 1215
SacI GAGCTC 2 cut(s) 27, 1145
SaqAI TTAA 7 cut(s) 105, 273, 794, 819, 1194, 1224, 1328
SatI GCNGC 1 cut(s) 1665
Sau3AI GATC 6 cut(s) 253, 701, 770, 1240, 1495, 1547
Sau96I GGNCC 4 cut(s) 505, 968, 1094, 1376
ScaI AGTACT 2 cut(s) 179, 949
SchI GAGTC 4 cut(s) 700, 850, 1375, 1424
ScrFI CCNGG 2 cut(s) 141, 1380
SduI GDGCHC 3 cut(s) 27, 148, 1145
SfaNI GCATC 3 cut(s) 202, 505, 722
SfcI CTRYAG 4 cut(s) 528, 579, 732, 1474
SinI GGWCC 4 cut(s) 505, 968, 1094, 1376
SmiMI CAYNNNNRTG 1 cut(s) 1215
SmlI CTYRAG 2 cut(s) 199, 344
SmoI CTYRAG 2 cut(s) 199, 344
SsiI CCGC 1 cut(s) 1620
SspMI CTAG 7 cut(s) 86, 395, 452, 633, 653, 768, 1460
SstI GAGCTC 2 cut(s) 27, 1145
StyD4I CCNGG 2 cut(s) 139, 1378
TaaI ACNGT 2 cut(s) 1438, 1687
TaqI TCGA 2 cut(s) 21, 599
TatI WGTACW 3 cut(s) 177, 926, 947
TfiI GAWTC 3 cut(s) 56, 133, 728
Tru1I TTAA 7 cut(s) 105, 273, 794, 819, 1194, 1224, 1328
Tru9I TTAA 7 cut(s) 105, 273, 794, 819, 1194, 1224, 1328
TscAI CASTG 3 cut(s) 888, 1288, 1549
TseFI GTSAC 4 cut(s) 643, 850, 1575, 1652
TseI GCWGC 1 cut(s) 1664
Tsp45I GTSAC 4 cut(s) 643, 850, 1575, 1652
TspDTI ATGAA 7 cut(s) 372, 576, 849, 1076, 1254, 1310, 1316
TspGWI ACGGA 3 cut(s) 7, 32, 1498
TspRI CASTG 3 cut(s) 888, 1288, 1549
Van91I CCANNNNNTGG 1 cut(s) 1405
VpaK11BI GGWCC 4 cut(s) 505, 968, 1094, 1376
XapI RAATTY 4 cut(s) 127, 310, 410, 918
XbaI TCTAGA 2 cut(s) 652, 767
XceI RCATGY 3 cut(s) 624, 818, 1671
XspI CTAG 7 cut(s) 86, 395, 452, 633, 653, 768, 1460
ZrmI AGTACT 2 cut(s) 179, 949
Zsp2I ATGCAT 1 cut(s) 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.