Prupe.6G226500_v2.0.a1

F-box-like WD repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
23076496 .. 23084197
7702 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G226500.1

Sequence Viewer

Length: 1689 bp
ATGACCTCCATCACCTCCGTCGAGTTGAATTTCCTCGTCTTTCGTTACCTTCAGGAATCAGGCTTCACCCACTCAGCTTTTGCTTTAGGATATGAGGCCGGTATCAACAAAAGCACTATAGATGGCAATTTGGTTCCACCTGGTGCCCTCATTACATTTGTACAAAAAGGACTTCAGTACTTGGAGATGGAAGCTAACTTGAGTAATAGTGACGCAGATTTGGACGAGGATTTCTCATTGATAAACCCTTTAGATCTTATCACAAAGGATTTATATCAACTTAGGCAAATGATTAAAGAGAAAAGGAAGAATCTACAGAAGGATAGAGACAAAGATAAAGAGCGTGAGTCTTATAAGAAAGATAAGGAGCTTGAAAAAGAACATGAAGGAGAGCGGGCACGAGTAAAAGAGAAGGAAAGGCAAGAAAGGGAGAAGGAATTTGAAAAGGACAGAGAGAGGATAGAAAAGAATAAGGAGCAAGAAAAGCAGCATGAGGACCACAATGACAGAGATATGGTTACTGATCAGGAAGAGAAGATTAATGTCAAACATGAAGAAAATGGAGCTTCTGGAGAACCAATGGATATTCCTACAACAGATGTTGAAATCCCTAGTTCTGATGTGACAATTCTAGAAGGCCATACTTCTGAGGTATGTGCTTGTGCTTGGAGTCCAGCAGGGTCCCTTCTTGCATCAGGGTCTGGAGATTCGACAGCTCGTATTTGGACCATTGCTGAAGGAAGCTCCAGATTGTCACAAAACGGCTCCTCAAATGTGTTGGTTCTGAAGCATGTTAAGGGTAGAACAAATGAGAAGAGTAAAGATGTCACGACACTGGATTGGAATGGAGAGGGAACACTGCTTGCAACGGGCTCATATGATGGGCAAGCAAGAATTTGGACTACAAATGGTGAATTAAGAAGTACTTTGAGCAAACATAAAGGACCTATATTCTCTCTAAAGTGGAACAAAAAGGGGGATTATCTTCTTACGGGAAGCTGCGATAAAACTGCAATTGTGTGGGATGTGAAGGCAGAAGAATCAAAACAACAGTTTGAATTCCATTCAGGTCCAACACTTGATGTTGACTGGCGCAACAATAATTCATTTGCAATGAGCTCAACAGACAATATGATATATGTTTGCAAGATTGGGGAAACCCGCCCTATTAAAACTTTTACAGGTCATCAGGGTGAAGTTAATTGCGTTAAATGGGACCCAACCGGTTCATTGTTGGCTTCATGTTCTGATGATATCAGTGCAAAGATATGGAGCATGAAGCAGGAAAAATGTGTCCATGATTTAAGAGAGCATTCTAAGGAGATATACACTATCAGATGGAGTCCCACTGGGCCGGGAACAAACAACGCTAACCAGCAGTTAGTTCTTGCAAGTGCATCGTTTGACTCCACTGTGAAGCTATGGGATGTGGAACTAGGAAAACTTCTCTACAGCTTGAATGGACACAGGGATCCTGTTTATTCTGTTGCCTTCAGCCCAAATGGCGAGTATTTAGCCAGTGGATCTCTTGATAAATCCATGCATATCTGGTCACTGAAGGAAGGCAAGATCGTGAAAACATACACAGGAAATGGCGGTATATTTGAAGTCTGCTGGAACAAGGAAGGTGACAAAATTGCTGCATGTTTTGCCAACAATACTGTCTGCGTTTTAGATTTTAGAATGTGA

Protein Analysis

563

Amino Acids

63.21

Weight (kDa)

5.44

Isoelectric Point (pI)

29.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
AccB1I GGYRCC 1 cut(s) 143
AccBSI CCGCTC 1 cut(s) 394
AciI CCGC 3 cut(s) 394, 1162, 1596
AclWI GGATC 3 cut(s) 1466, 1479, 1531
AcsI RAATTY 4 cut(s) 28, 437, 894, 1058
AcuI CTGAAG 6 cut(s) 35, 158, 756, 806, 1477, 1577
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 3 cut(s) 162, 179, 925
AgeI ACCGGT 1 cut(s) 1223
AgsI TTSAA 7 cut(s) 28, 374, 443, 605, 1058, 1459, 1607
AjnI CCWGG 1 cut(s) 139
Alw21I GWGCWC 1 cut(s) 1121
Alw26I GTCTC 1 cut(s) 321
AlwI GGATC 3 cut(s) 1466, 1479, 1531
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 3 cut(s) 96, 637, 1352
ApeKI GCWGC 3 cut(s) 487, 999, 1640
ApoI RAATTY 4 cut(s) 28, 437, 894, 1058
AseI ATTAAT 1 cut(s) 540
AsiGI ACCGGT 1 cut(s) 1223
AspLEI GCGC 1 cut(s) 1095
AspS9I GGNCC 7 cut(s) 496, 681, 726, 944, 1070, 1216, 1352
AsuC2I CCSGG 1 cut(s) 1356
AsuHPI GGTGA 5 cut(s) 4, 58, 923, 1205, 1640
AvaII GGWCC 6 cut(s) 496, 681, 726, 944, 1070, 1216
BaeGI GKGCMC 2 cut(s) 148, 400
BamHI GGATCC 1 cut(s) 1471
BanI GGYRCC 1 cut(s) 143
BanII GRGCYC 2 cut(s) 875, 1121
BauI CACGAG 1 cut(s) 399
Bbv12I GWGCWC 1 cut(s) 1121
BbvI GCAGC 3 cut(s) 499, 986, 1627
BccI CCATC 5 cut(s) 17, 116, 181, 875, 1332
BceAI ACGGC 1 cut(s) 778
BcgI CGANNNNNNTGC 4 cut(s) 992, 1026, 1380, 1414
BciT130I CCWGG 1 cut(s) 141
BclI TGATCA 1 cut(s) 523
BcnI CCSGG 1 cut(s) 1356
BcoDI GTCTC 1 cut(s) 321
BfaI CTAG 3 cut(s) 612, 632, 1436
BfmI CTRYAG 3 cut(s) 117, 314, 1450
BglI GCCNNNNNGGC 1 cut(s) 1503
BglII AGATCT 1 cut(s) 253
BisI GCNGC 3 cut(s) 488, 1000, 1641
BlsI GCNGC 3 cut(s) 489, 1001, 1642
BmcAI AGTACT 2 cut(s) 179, 925
Bme1390I CCNGG 2 cut(s) 141, 1356
Bme18I GGWCC 6 cut(s) 496, 681, 726, 944, 1070, 1216
BmgT120I GGNCC 7 cut(s) 496, 681, 726, 944, 1070, 1216, 1352
BmiI GGNNCC 8 cut(s) 135, 145, 682, 683, 766, 1217, 1218, 1473
BmrFI CCNGG 2 cut(s) 141, 1356
BmrI ACTGGG 1 cut(s) 1359
BmsI GCATC 2 cut(s) 701, 1406
BmuI ACTGGG 1 cut(s) 1359
BplI GAGNNNNNCTC 2 cut(s) 218, 250
BpmI CTGGAG 3 cut(s) 591, 723, 730
BpuEI CTTGAG 1 cut(s) 220
BpuMI CCSGG 1 cut(s) 1356
BsaBI GATNNNNATC 1 cut(s) 273
BsaWI WCCGGW 1 cut(s) 1223
Bse118I RCCGGY 2 cut(s) 98, 1223
Bse1I ACTGG 4 cut(s) 840, 1094, 1354, 1518
Bse3DI GCAATG 2 cut(s) 729, 1119
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 1 cut(s) 141
BseGI GGATG 2 cut(s) 1030, 1432
BseJI GATNNNNATC 1 cut(s) 273
BseMI GCAATG 2 cut(s) 729, 1119
BseMII CTCAG 2 cut(s) 87, 639
BseNI ACTGG 4 cut(s) 840, 1094, 1354, 1518
BseRI GAGGAG 1 cut(s) 757
BseSI GKGCMC 2 cut(s) 148, 400
BseXI GCAGC 3 cut(s) 499, 986, 1627
BshFI GGCC 3 cut(s) 98, 639, 1354
BshNI GGYRCC 1 cut(s) 143
BshTI ACCGGT 1 cut(s) 1223
BsiHKAI GWGCWC 1 cut(s) 1121
BsiSI CCGG 3 cut(s) 99, 1224, 1355
BslFI GGGAC 3 cut(s) 667, 1229, 1329
BsmAI GTCTC 1 cut(s) 321
BsmFI GGGAC 3 cut(s) 667, 1229, 1329
BsmI GAATGC 1 cut(s) 1312
BsnI GGCC 3 cut(s) 98, 639, 1354
Bsp1286I GDGCHC 4 cut(s) 148, 400, 875, 1121
Bsp1407I TGTACA 1 cut(s) 160
Bsp143I GATC 5 cut(s) 253, 523, 1471, 1523, 1569
BspACI CCGC 3 cut(s) 394, 1162, 1596
BspANI GGCC 3 cut(s) 98, 639, 1354
BspCNI CTCAG 2 cut(s) 86, 640
BspLI GGNNCC 8 cut(s) 135, 145, 682, 683, 766, 1217, 1218, 1473
BspPI GGATC 3 cut(s) 1466, 1479, 1531
BspT107I GGYRCC 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 394
BsrDI GCAATG 2 cut(s) 729, 1119
BsrFI RCCGGY 2 cut(s) 98, 1223
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 4 cut(s) 840, 1094, 1354, 1518
BssAI RCCGGY 2 cut(s) 98, 1223
BssMI GATC 5 cut(s) 253, 523, 1471, 1523, 1569
BssSI CACGAG 1 cut(s) 399
Bst2BI CACGAG 1 cut(s) 399
Bst2UI CCWGG 1 cut(s) 141
Bst4CI ACNGT 3 cut(s) 1053, 1414, 1663
Bst6I CTCTTC 2 cut(s) 525, 809
BstAPI GCANNNNNTGC 1 cut(s) 1649
BstAUI TGTACA 1 cut(s) 160
BstC8I GCNNGC 3 cut(s) 396, 864, 888
BstDEI CTNAG 4 cut(s) 73, 281, 648, 1317
BstF5I GGATG 2 cut(s) 1030, 1432
BstHHI GCGC 1 cut(s) 1095
BstKTI GATC 5 cut(s) 256, 526, 1474, 1526, 1572
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 5 cut(s) 253, 523, 1471, 1523, 1569
BstMWI GCNNNNNNNGC 3 cut(s) 484, 1503, 1649
BstNI CCWGG 1 cut(s) 141
BstNSI RCATGY 2 cut(s) 794, 1647
BstSCI CCNGG 2 cut(s) 139, 1354
BstSFI CTRYAG 3 cut(s) 117, 314, 1450
BstSLI GKGCMC 2 cut(s) 148, 400
BstV1I GCAGC 3 cut(s) 499, 986, 1627
BstX2I RGATCY 3 cut(s) 253, 1471, 1523
BstYI RGATCY 3 cut(s) 253, 1471, 1523
BsuRI GGCC 3 cut(s) 98, 639, 1354
BtsCI GGATG 2 cut(s) 1030, 1432
BtsI GCAGTG 1 cut(s) 857
BtsIMutI CAGTG 7 cut(s) 833, 857, 1264, 1347, 1410, 1525, 1553
Cac8I GCNNGC 3 cut(s) 396, 864, 888
CaiI CAGNNNCTG 1 cut(s) 701
CfoI GCGC 1 cut(s) 1095
Cfr10I RCCGGY 2 cut(s) 98, 1223
Cfr13I GGNCC 7 cut(s) 496, 681, 726, 944, 1070, 1216, 1352
CseI GACGC 1 cut(s) 221
CsiI ACCWGGT 1 cut(s) 139
Csp6I GTAC 3 cut(s) 161, 178, 924
CspAI ACCGGT 1 cut(s) 1223
CviAII CATG 9 cut(s) 383, 491, 551, 791, 1242, 1276, 1298, 1540, 1644
CviQI GTAC 3 cut(s) 161, 178, 924
DdeI CTNAG 4 cut(s) 73, 281, 648, 1317
DpnI GATC 5 cut(s) 255, 525, 1473, 1525, 1571
DpnII GATC 5 cut(s) 253, 523, 1471, 1523, 1569
DraIII CACNNNGTG 1 cut(s) 143
Eam1104I CTCTTC 2 cut(s) 525, 809
EarI CTCTTC 2 cut(s) 525, 809
Ecl136II GAGCTC 1 cut(s) 1119
Eco24I GRGCYC 2 cut(s) 875, 1121
Eco32I GATATC 1 cut(s) 1255
Eco47I GGWCC 6 cut(s) 496, 681, 726, 944, 1070, 1216
Eco53kI GAGCTC 1 cut(s) 1119
Eco57I CTGAAG 6 cut(s) 35, 158, 756, 806, 1477, 1577
EcoICRI GAGCTC 1 cut(s) 1119
EcoO109I RGGNCCY 3 cut(s) 681, 944, 1216
EcoRI GAATTC 1 cut(s) 1058
EcoRII CCWGG 1 cut(s) 139
EcoRV GATATC 1 cut(s) 1255
EcoT22I ATGCAT 1 cut(s) 1545
EcoT38I GRGCYC 2 cut(s) 875, 1121
FaeI CATG 9 cut(s) 386, 494, 554, 794, 1245, 1279, 1301, 1543, 1647
FalI AAGNNNNNCTT 2 cut(s) 910, 942
FaqI GGGAC 3 cut(s) 667, 1229, 1329
FatI CATG 9 cut(s) 382, 490, 550, 790, 1241, 1275, 1297, 1539, 1643
FauI CCCGC 2 cut(s) 387, 1169
FauNDI CATATG 1 cut(s) 877
FbaI TGATCA 1 cut(s) 523
Fnu4HI GCNGC 3 cut(s) 488, 1000, 1641
FokI GGATG 2 cut(s) 1037, 1439
FriOI GRGCYC 2 cut(s) 875, 1121
Fsp4HI GCNGC 3 cut(s) 488, 1000, 1641
FspBI CTAG 3 cut(s) 612, 632, 1436
GlaI GCGC 1 cut(s) 1094
GluI GCNGC 3 cut(s) 488, 1000, 1641
GsuI CTGGAG 3 cut(s) 591, 723, 730
HaeIII GGCC 3 cut(s) 98, 639, 1354
HapII CCGG 3 cut(s) 99, 1224, 1355
HgaI GACGC 1 cut(s) 221
HhaI GCGC 1 cut(s) 1095
Hin1II CATG 9 cut(s) 386, 494, 554, 794, 1245, 1279, 1301, 1543, 1647
Hin6I GCGC 1 cut(s) 1093
HinP1I GCGC 1 cut(s) 1093
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HinfI GANTC 8 cut(s) 56, 310, 347, 670, 707, 1040, 1342, 1406
HpaII CCGG 3 cut(s) 99, 1224, 1355
HphI GGTGA 5 cut(s) 4, 58, 923, 1205, 1640
Hpy166II GTNNAC 1 cut(s) 1087
Hpy188I TCNGA 5 cut(s) 619, 649, 786, 1249, 1337
Hpy188III TCNNGA 9 cut(s) 53, 527, 570, 632, 702, 747, 829, 1529, 1573
Hpy8I GTNNAC 1 cut(s) 1087
Hpy99I CGWCG 1 cut(s) 23
HpyCH4III ACNGT 3 cut(s) 1053, 1414, 1663
HpyF10VI GCNNNNNNNGC 3 cut(s) 484, 1503, 1649
HpyF3I CTNAG 4 cut(s) 73, 281, 648, 1317
Hsp92II CATG 9 cut(s) 386, 494, 554, 794, 1245, 1279, 1301, 1543, 1647
HspAI GCGC 1 cut(s) 1093
KflI GGGWCCC 2 cut(s) 681, 1216
Ksp22I TGATCA 1 cut(s) 523
Kzo9I GATC 5 cut(s) 253, 523, 1471, 1523, 1569
LmnI GCTCC 6 cut(s) 367, 475, 563, 749, 770, 1272
Lsp1109I GCAGC 3 cut(s) 499, 986, 1627
LweI GCATC 2 cut(s) 701, 1406
MabI ACCWGGT 1 cut(s) 139
MaeI CTAG 3 cut(s) 612, 632, 1436
MaeIII GTNAC 8 cut(s) 44, 209, 517, 622, 753, 826, 1551, 1628
MalI GATC 5 cut(s) 255, 525, 1473, 1525, 1571
MbiI CCGCTC 1 cut(s) 394
MboI GATC 5 cut(s) 253, 523, 1471, 1523, 1569
MboII GAAGA 7 cut(s) 319, 542, 547, 566, 826, 977, 1049
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 3 cut(s) 253, 1471, 1523
MhlI GDGCHC 4 cut(s) 148, 400, 875, 1121
MlyI GAGTC 4 cut(s) 356, 679, 1351, 1400
MmeI TCCRAC 1 cut(s) 1097
Mph1103I ATGCAT 1 cut(s) 1545
MseI TTAA 8 cut(s) 294, 540, 795, 917, 1170, 1200, 1209, 1304
MslI CAYNNNNRTG 1 cut(s) 1191
MspI CCGG 3 cut(s) 99, 1224, 1355
MspR9I CCNGG 2 cut(s) 141, 1356
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 1 cut(s) 1312
MvaI CCWGG 1 cut(s) 141
MwoI GCNNNNNNNGC 3 cut(s) 484, 1503, 1649
NciI CCSGG 1 cut(s) 1356
NdeI CATATG 1 cut(s) 877
NdeII GATC 5 cut(s) 253, 523, 1471, 1523, 1569
NlaIII CATG 9 cut(s) 386, 494, 554, 794, 1245, 1279, 1301, 1543, 1647
NlaIV GGNNCC 8 cut(s) 135, 145, 682, 683, 766, 1217, 1218, 1473
NmuCI GTSAC 6 cut(s) 209, 622, 753, 826, 1551, 1628
NsiI ATGCAT 1 cut(s) 1545
NspI RCATGY 2 cut(s) 794, 1647
PctI GAATGC 1 cut(s) 1312
PfeI GAWTC 4 cut(s) 56, 310, 707, 1040
PinAI ACCGGT 1 cut(s) 1223
PkrI GCNGC 3 cut(s) 489, 1001, 1642
PleI GAGTC 4 cut(s) 355, 678, 1350, 1400
PpsI GAGTC 4 cut(s) 355, 678, 1350, 1400
PpuMI RGGWCCY 3 cut(s) 681, 944, 1216
PshBI ATTAAT 1 cut(s) 540
PsiI TTATAA 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 1121
Psp5II RGGWCCY 3 cut(s) 681, 944, 1216
Psp6I CCWGG 1 cut(s) 139
PspGI CCWGG 1 cut(s) 139
PspN4I GGNNCC 8 cut(s) 135, 145, 682, 683, 766, 1217, 1218, 1473
PspPI GGNCC 7 cut(s) 496, 681, 726, 944, 1070, 1216, 1352
PspPPI RGGWCCY 3 cut(s) 681, 944, 1216
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 3 cut(s) 253, 1471, 1523
RsaI GTAC 3 cut(s) 162, 179, 925
RsaNI GTAC 3 cut(s) 161, 178, 924
RseI CAYNNNNRTG 1 cut(s) 1191
SacI GAGCTC 1 cut(s) 1121
SaqAI TTAA 8 cut(s) 294, 540, 795, 917, 1170, 1200, 1209, 1304
SatI GCNGC 3 cut(s) 488, 1000, 1641
Sau3AI GATC 5 cut(s) 253, 523, 1471, 1523, 1569
Sau96I GGNCC 7 cut(s) 496, 681, 726, 944, 1070, 1216, 1352
ScaI AGTACT 2 cut(s) 179, 925
SchI GAGTC 4 cut(s) 356, 679, 1351, 1400
ScrFI CCNGG 2 cut(s) 141, 1356
SduI GDGCHC 4 cut(s) 148, 400, 875, 1121
SexAI ACCWGGT 1 cut(s) 139
SfaNI GCATC 2 cut(s) 701, 1406
SfcI CTRYAG 3 cut(s) 117, 314, 1450
SinI GGWCC 6 cut(s) 496, 681, 726, 944, 1070, 1216
SmiMI CAYNNNNRTG 1 cut(s) 1191
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
SsiI CCGC 3 cut(s) 394, 1162, 1596
SspMI CTAG 3 cut(s) 612, 632, 1436
SstI GAGCTC 1 cut(s) 1121
StyD4I CCNGG 2 cut(s) 139, 1354
TaaI ACNGT 3 cut(s) 1053, 1414, 1663
TaqI TCGA 2 cut(s) 21, 710
TatI WGTACW 3 cut(s) 160, 177, 923
TfiI GAWTC 4 cut(s) 56, 310, 707, 1040
Tru1I TTAA 8 cut(s) 294, 540, 795, 917, 1170, 1200, 1209, 1304
Tru9I TTAA 8 cut(s) 294, 540, 795, 917, 1170, 1200, 1209, 1304
TscAI CASTG 7 cut(s) 840, 864, 1264, 1354, 1417, 1525, 1560
TseFI GTSAC 6 cut(s) 209, 622, 753, 826, 1551, 1628
TseI GCWGC 3 cut(s) 487, 999, 1640
Tsp45I GTSAC 6 cut(s) 209, 622, 753, 826, 1551, 1628
TspDTI ATGAA 6 cut(s) 399, 567, 1095, 1218, 1230, 1292
TspGWI ACGGA 1 cut(s) 7
TspRI CASTG 7 cut(s) 840, 864, 1264, 1354, 1417, 1525, 1560
VpaK11BI GGWCC 6 cut(s) 496, 681, 726, 944, 1070, 1216
VspI ATTAAT 1 cut(s) 540
XapI RAATTY 4 cut(s) 28, 437, 894, 1058
XbaI TCTAGA 1 cut(s) 631
XceI RCATGY 2 cut(s) 794, 1647
XspI CTAG 3 cut(s) 612, 632, 1436
ZrmI AGTACT 2 cut(s) 179, 925
Zsp2I ATGCAT 1 cut(s) 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.