Rh6DG481500

F-box-like WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0003410
Physical Location & Seq
Forward (+)
64553372 .. 64557004
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG481500.1

Sequence Viewer

Length: 1314 bp
ATGATCTCCATCAACTCCACCGAATTGAACTACCTGGTCTTCCGTTACCTCCATGAATCAGGCTTCACACATTCAGCTTATGCTTTCGGATTCGAGGCGGGGATCAACAAGAGCACGGTTGATGGTAACCTAGTTCCGCCTGGTGCACTTGTTACGTTTCTCCAGAAAGGTCTTCAGTTTCTTGAGCTGGAGGCGGACTTAGGCAATGGTAGTGATGCGGATATGGAGGATGACTTTTCGTTCCTGCAACCGTTGGATTTTATCACAAAAGATGCGTATCAATTGCAGAAAATTGTTAGGGAAAAGAAGGATAGGATGAATGCTGCTAACAATGAGTCCAAGCAGGAAAGCGAAAGGGAAGTAGAGGTGGAGAGAAAAGAAGAAGAGATTCGAGACGATAAGTCGGAGAAGGATAGGGAGCAGGAGATTGGTAAAGAGGAGGAGAAGTCGAATCAGGATCAAAGTGAGATGGAGCCTGAAGAAAATGGAACTGGTGGAGGGGTGGAGCCAATGGAGACCTCCCCGAGCTCAACGTTCGTGCCTGGTGAAATTCCTAGTAGTGATGTCATAGTTCTAGATGGGCATACCTCAGAGGTTTTTGCTTGTGCATGGAGTCCATCTGGTTCGCTTCTTGCATCTGGTTCTGGGGATTCAACAGCTCGAATTTGGACCATTGCCAGTGGAAGTTGTAGATCTAGCATTCAAAATGAACCTGCACGTGTGTTAAAGCATTTCAAAGGGAGAGCCAATGAGAAAAGCAAGGATGTGACTACACTTGATTGGAATGATGATGGAACGTTACTAGCAACAGGTTCCTATGATGGGCAAGCAAGAATATGGGGTAGCGACGGAGAGTTGAGGACTAATTTGATCAGACATAAAGGGCCAATCTTTTCTCTGAAGTGGAACAAAGAAGGTGATTATCTTCTGAGTGGAAGTGTGGATAAAACTGCAATTGTGTGGGACATAAAGACTGGCGAATGGAAACAACAGTTTGAATTTCATTCAGCTCCAACTCTGGATGTTGATTGGCGAGACAATACTTCTTTTGCAACATGCTCTACTGATGGTACGATACATGTTTGCAAGGTTGGAGAGAACCAACCAATTAAAACTTTCTTAGGCCATCAGGGTGAAGTTAATGCTATTAAGTGGGATCCGACCGGCTCATTATTGGCTTCTTGCTCTGATGATCATACAGCAAAGATATGGAGTATGAAGCAAGACAAATATTTGCATGATTTGAAGGAACATGTTAAGGTACTTGTTGGTTTTCCATCTGTGAGTTTGTGGTATATAAATTCCATATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0001067 GO:0002021 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006508 GO:0006511 GO:0006629 GO:0006807 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0015630 GO:0016042 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0017053 GO:0019216 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0023051 GO:0023056 GO:0030111 GO:0030154 GO:0030163 GO:0030177 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035264 GO:0035601 GO:0036211 GO:0040007 GO:0042393 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045444 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0047485 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050872 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051603 GO:0060255 GO:0060612 GO:0060613 GO:0060828 GO:0061448 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090263 GO:0097159 GO:0098732 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04013 ko04310 map04013 map04310
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

437

Amino Acids

48.64

Weight (kDa)

4.79

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH PF08513 8 - 32 1.4e-06 LisH
WD40_WDHD1_1st PF24817 186 - 235 5.4e-06 WDHD1 first WD40 domain
WD40 PF00400 189 - 223 7.3e-10 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 189 - 235 1.4e-06 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 189 - 281 4.3e-16 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 190 - 237 2.8e-06 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 192 - 285 2.9e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 193 - 327 5.4e-10 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_Aladin PF25460 198 - 326 4.8e-10 Aladin seven-bladed propeller
Beta-prop_EML_2 PF23414 248 - 348 3.1e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19 PF24814 249 - 330 7.6e-10 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 250 - 372 1.3e-22 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 250 - 348 6.9e-15 WDR3 first beta-propeller domain
WD40 PF00400 253 - 280 2.3e-07 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 253 - 335 1.6e-11 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 253 - 347 2.8e-15 THOC3 beta-propeller domain
EIF3I PF24805 253 - 355 1e-09 EIF3I
WDR55 PF24796 255 - 411 5.3e-13 WDR55
Beta-prop_WDR3_2nd PF25172 256 - 355 8.7e-09 WDR3 second beta-propeller domain
WD40 PF00400 286 - 322 6.4e-07 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 288 - 406 2.4e-10 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 289 - 408 3.7e-11 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 292 - 368 3.7e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 293 - 411 2.1e-11 WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz PF24807 294 - 418 4.4e-21 CDC20/Fizzy WD40 domain
WD40_Gbeta PF25391 307 - 430 1.3e-13 G protein beta WD-40 repeat protein
Beta-prop_WDR90_POC16_2nd PF23393 313 - 411 9.5e-06 WDR90/POC16, second beta-propeller
WD40_Prp19 PF24814 340 - 420 9.9e-13 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 341 - 416 2.3e-12 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 345 - 420 1.3e-13 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 346 - 421 2.3e-16 WDR5 beta-propeller domain
Beta-prop_Vps41 PF23411 348 - 412 5.4e-06 Vps42 beta-propeller
WD40 PF00400 368 - 405 3.2e-11 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 721
AciI CCGC 4 cut(s) 98, 137, 194, 218
AclI AACGTT 2 cut(s) 533, 797
AclWI GGATC 4 cut(s) 110, 465, 1151, 1164
AcsI RAATTY 4 cut(s) 549, 663, 998, 1300
AcuI CTGAAG 3 cut(s) 158, 498, 920
AcvI CACGTG 1 cut(s) 719
AfaI GTAC 2 cut(s) 1072, 1263
AfiI CCNNNNNNNGG 1 cut(s) 822
AflIII ACRYGT 3 cut(s) 718, 1078, 1252
AgsI TTSAA 6 cut(s) 28, 654, 704, 736, 998, 1246
AhdI GACNNNNNGTC 1 cut(s) 400
AjnI CCWGG 3 cut(s) 33, 139, 541
AluBI AGCT 5 cut(s) 77, 187, 528, 659, 1010
AluI AGCT 5 cut(s) 77, 187, 528, 659, 1010
Alw21I GWGCWC 3 cut(s) 116, 148, 530
Alw26I GTCTC 3 cut(s) 387, 509, 1029
Alw44I GTGCAC 1 cut(s) 144
AlwI GGATC 4 cut(s) 110, 465, 1151, 1164
Ama87I CYCGRG 1 cut(s) 523
AoxI GGCC 2 cut(s) 884, 1123
ApaLI GTGCAC 1 cut(s) 144
ApeKI GCWGC 1 cut(s) 323
ApoI RAATTY 4 cut(s) 549, 663, 998, 1300
Asp700I GAANNNNTTC 1 cut(s) 387
AspS9I GGNCC 2 cut(s) 669, 884
AsuHPI GGTGA 3 cut(s) 557, 929, 1145
AvaI CYCGRG 1 cut(s) 523
AvaII GGWCC 1 cut(s) 669
BaeGI GKGCMC 1 cut(s) 148
BamHI GGATCC 1 cut(s) 1156
BanII GRGCYC 1 cut(s) 530
BbrPI CACGTG 1 cut(s) 719
BbsI GAAGAC 2 cut(s) 31, 164
Bbv12I GWGCWC 3 cut(s) 116, 148, 530
BbvI GCAGC 1 cut(s) 310
BciT130I CCWGG 3 cut(s) 35, 141, 543
BclI TGATCA 2 cut(s) 870, 1192
BcoDI GTCTC 3 cut(s) 387, 509, 1029
BfaI CTAG 5 cut(s) 131, 555, 575, 696, 803
BfuAI ACCTGC 1 cut(s) 721
BglII AGATCT 1 cut(s) 692
BisI GCNGC 1 cut(s) 324
BlsI GCNGC 1 cut(s) 325
Bme1390I CCNGG 3 cut(s) 35, 141, 543
Bme18I GGWCC 1 cut(s) 669
BmeRI GACNNNNNGTC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 523
BmgT120I GGNCC 2 cut(s) 669, 884
BmiI GGNNCC 4 cut(s) 474, 507, 814, 1158
BmrFI CCNGG 3 cut(s) 35, 141, 543
BmsI GCATC 3 cut(s) 205, 262, 644
BpiI GAAGAC 2 cut(s) 31, 164
BpmI CTGGAG 2 cut(s) 146, 209
BpuEI CTTGAG 1 cut(s) 203
BsaAI YACGTR 1 cut(s) 719
BsaBI GATNNNNATC 2 cut(s) 8, 276
BsaI GGTCTC 1 cut(s) 509
BsaXI ACNNNNNCTCC 2 cut(s) 431, 461
Bsc4I CCNNNNNNNGG 1 cut(s) 822
Bse118I RCCGGY 1 cut(s) 1163
Bse1I ACTGG 3 cut(s) 496, 678, 979
Bse3DI GCAATG 2 cut(s) 211, 672
Bse8I GATNNNNATC 2 cut(s) 8, 276
BseBI CCWGG 3 cut(s) 35, 141, 543
BseGI GGATG 4 cut(s) 235, 321, 769, 1027
BseJI GATNNNNATC 2 cut(s) 8, 276
BseLI CCNNNNNNNGG 1 cut(s) 822
BseMI GCAATG 2 cut(s) 211, 672
BseMII CTCAG 2 cut(s) 603, 920
BseNI ACTGG 3 cut(s) 496, 678, 979
BseRI GAGGAG 2 cut(s) 452, 455
BseSI GKGCMC 1 cut(s) 148
BseXI GCAGC 1 cut(s) 310
BsgI GTGCAG 1 cut(s) 699
Bsh1285I CGRYCG 1 cut(s) 1164
BshFI GGCC 2 cut(s) 886, 1125
BsiEI CGRYCG 1 cut(s) 1164
BsiHKAI GWGCWC 3 cut(s) 116, 148, 530
BsiHKCI CYCGRG 1 cut(s) 523
BsiSI CCGG 1 cut(s) 1164
BslFI GGGAC 1 cut(s) 977
BslI CCNNNNNNNGG 1 cut(s) 822
BsmAI GTCTC 3 cut(s) 387, 509, 1029
BsmBI CGTCTC 1 cut(s) 387
BsmFI GGGAC 1 cut(s) 977
BsmI GAATGC 2 cut(s) 325, 699
BsnI GGCC 2 cut(s) 886, 1125
Bso31I GGTCTC 1 cut(s) 509
BsoBI CYCGRG 1 cut(s) 523
Bsp1286I GDGCHC 3 cut(s) 116, 148, 530
Bsp143I GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
BspACI CCGC 4 cut(s) 98, 137, 194, 218
BspANI GGCC 2 cut(s) 886, 1125
BspCNI CTCAG 2 cut(s) 602, 921
BspLI GGNNCC 4 cut(s) 474, 507, 814, 1158
BspMI ACCTGC 1 cut(s) 721
BspPI GGATC 4 cut(s) 110, 465, 1151, 1164
BspTNI GGTCTC 1 cut(s) 509
BsrDI GCAATG 2 cut(s) 211, 672
BsrFI RCCGGY 1 cut(s) 1163
BsrI ACTGG 3 cut(s) 496, 678, 979
BssAI RCCGGY 1 cut(s) 1163
BssMI GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
Bst2UI CCWGG 3 cut(s) 35, 141, 543
Bst4CI ACNGT 3 cut(s) 118, 252, 993
Bst6I CTCTTC 1 cut(s) 378
BstBAI YACGTR 1 cut(s) 719
BstC8I GCNNGC 1 cut(s) 828
BstDEI CTNAG 4 cut(s) 199, 589, 929, 1120
BstEII GGTNACC 1 cut(s) 125
BstF5I GGATG 4 cut(s) 235, 321, 769, 1027
BstKTI GATC 7 cut(s) 6, 105, 460, 695, 873, 1159, 1195
BstMAI GTCTC 3 cut(s) 387, 509, 1029
BstMBI GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
BstMCI CGRYCG 1 cut(s) 1164
BstNI CCWGG 3 cut(s) 35, 141, 543
BstNSI RCATGY 3 cut(s) 1059, 1082, 1256
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 3 cut(s) 33, 139, 541
BstSLI GKGCMC 1 cut(s) 148
BstV1I GCAGC 1 cut(s) 310
BstV2I GAAGAC 2 cut(s) 31, 164
BstX2I RGATCY 2 cut(s) 692, 1156
BstYI RGATCY 2 cut(s) 692, 1156
BsuRI GGCC 2 cut(s) 886, 1125
BtsCI GGATG 4 cut(s) 235, 321, 769, 1027
BtsIMutI CAGTG 1 cut(s) 685
BveI ACCTGC 1 cut(s) 721
Cac8I GCNNGC 1 cut(s) 828
Cfr10I RCCGGY 1 cut(s) 1163
Cfr13I GGNCC 2 cut(s) 669, 884
CsiI ACCWGGT 1 cut(s) 33
Csp6I GTAC 2 cut(s) 1071, 1262
CviAII CATG 6 cut(s) 53, 609, 1056, 1079, 1238, 1253
CviQI GTAC 2 cut(s) 1071, 1262
DdeI CTNAG 4 cut(s) 199, 589, 929, 1120
DpnI GATC 7 cut(s) 5, 104, 459, 694, 872, 1158, 1194
DpnII GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
DriI GACNNNNNGTC 1 cut(s) 400
Eam1104I CTCTTC 1 cut(s) 378
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 1 cut(s) 378
EciI GGCGGA 2 cut(s) 126, 209
Ecl136II GAGCTC 1 cut(s) 528
Eco24I GRGCYC 1 cut(s) 530
Eco31I GGTCTC 1 cut(s) 509
Eco47I GGWCC 1 cut(s) 669
Eco53kI GAGCTC 1 cut(s) 528
Eco57I CTGAAG 3 cut(s) 158, 498, 920
Eco72I CACGTG 1 cut(s) 719
Eco88I CYCGRG 1 cut(s) 523
Eco91I GGTNACC 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 528
EcoO65I GGTNACC 1 cut(s) 125
EcoRII CCWGG 3 cut(s) 33, 139, 541
EcoT38I GRGCYC 1 cut(s) 530
Esp3I CGTCTC 1 cut(s) 387
FaeI CATG 6 cut(s) 56, 612, 1059, 1082, 1241, 1256
FaqI GGGAC 1 cut(s) 977
FatI CATG 6 cut(s) 52, 608, 1055, 1078, 1237, 1252
FauI CCCGC 1 cut(s) 91
FbaI TGATCA 2 cut(s) 870, 1192
Fnu4HI GCNGC 1 cut(s) 324
FokI GGATG 4 cut(s) 242, 328, 776, 1034
FriOI GRGCYC 1 cut(s) 530
Fsp4HI GCNGC 1 cut(s) 324
FspBI CTAG 5 cut(s) 131, 555, 575, 696, 803
GluI GCNGC 1 cut(s) 324
GsuI CTGGAG 2 cut(s) 146, 209
HaeIII GGCC 2 cut(s) 886, 1125
HapII CCGG 1 cut(s) 1164
Hin1II CATG 6 cut(s) 56, 612, 1059, 1082, 1241, 1256
HinfI GANTC 7 cut(s) 56, 90, 335, 388, 451, 613, 650
HpaII CCGG 1 cut(s) 1164
HphI GGTGA 3 cut(s) 557, 929, 1145
Hpy166II GTNNAC 1 cut(s) 146
Hpy188I TCNGA 8 cut(s) 89, 406, 592, 875, 900, 930, 1161, 1189
Hpy188III TCNNGA 6 cut(s) 163, 182, 392, 455, 575, 1019
Hpy8I GTNNAC 1 cut(s) 146
Hpy99I CGWCG 1 cut(s) 851
HpyAV CCTTC 4 cut(s) 301, 403, 908, 1240
HpyCH4III ACNGT 3 cut(s) 118, 252, 993
HpyCH4IV ACGT 4 cut(s) 155, 533, 718, 797
HpyF3I CTNAG 4 cut(s) 199, 589, 929, 1120
HpySE526I ACGT 4 cut(s) 155, 533, 718, 797
Hsp92II CATG 6 cut(s) 56, 612, 1059, 1082, 1241, 1256
Ksp22I TGATCA 2 cut(s) 870, 1192
Kzo9I GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
LmnI GCTCC 4 cut(s) 418, 472, 505, 1015
Lsp1109I GCAGC 1 cut(s) 310
LweI GCATC 3 cut(s) 205, 262, 644
MabI ACCWGGT 1 cut(s) 33
MaeI CTAG 5 cut(s) 131, 555, 575, 696, 803
MaeII ACGT 4 cut(s) 155, 533, 718, 797
MaeIII GTNAC 5 cut(s) 44, 125, 151, 766, 798
MalI GATC 7 cut(s) 5, 104, 459, 694, 872, 1158, 1194
MboI GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
MboII GAAGA 6 cut(s) 31, 164, 392, 395, 491, 917
MfeI CAATTG 2 cut(s) 281, 954
MflI RGATCY 2 cut(s) 692, 1156
MhlI GDGCHC 3 cut(s) 116, 148, 530
MlyI GAGTC 2 cut(s) 344, 622
MmeI TCCRAC 5 cut(s) 234, 384, 1037, 1072, 1184
MroXI GAANNNNTTC 1 cut(s) 387
MseI TTAA 5 cut(s) 725, 1110, 1140, 1149, 1257
MslI CAYNNNNRTG 1 cut(s) 1131
MspI CCGG 1 cut(s) 1164
MspR9I CCNGG 3 cut(s) 35, 141, 543
MunI CAATTG 2 cut(s) 281, 954
Mva1269I GAATGC 2 cut(s) 325, 699
MvaI CCWGG 3 cut(s) 35, 141, 543
NdeII GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
NlaIII CATG 6 cut(s) 56, 612, 1059, 1082, 1241, 1256
NlaIV GGNNCC 4 cut(s) 474, 507, 814, 1158
NmuCI GTSAC 1 cut(s) 766
NspI RCATGY 3 cut(s) 1059, 1082, 1256
PciI ACATGT 2 cut(s) 1078, 1252
PctI GAATGC 2 cut(s) 325, 699
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 5 cut(s) 56, 90, 388, 451, 650
PkrI GCNGC 1 cut(s) 325
PleI GAGTC 2 cut(s) 343, 621
PmaCI CACGTG 1 cut(s) 719
PmlI CACGTG 1 cut(s) 719
PpsI GAGTC 2 cut(s) 343, 621
Ppu21I YACGTR 1 cut(s) 719
PscI ACATGT 2 cut(s) 1078, 1252
Psp124BI GAGCTC 1 cut(s) 530
Psp1406I AACGTT 2 cut(s) 533, 797
Psp6I CCWGG 3 cut(s) 33, 139, 541
PspCI CACGTG 1 cut(s) 719
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 3 cut(s) 33, 139, 541
PspN4I GGNNCC 4 cut(s) 474, 507, 814, 1158
PspPI GGNCC 2 cut(s) 669, 884
PsuI RGATCY 2 cut(s) 692, 1156
RsaI GTAC 2 cut(s) 1072, 1263
RsaNI GTAC 2 cut(s) 1071, 1262
RseI CAYNNNNRTG 1 cut(s) 1131
SacI GAGCTC 1 cut(s) 530
SaqAI TTAA 5 cut(s) 725, 1110, 1140, 1149, 1257
SatI GCNGC 1 cut(s) 324
Sau3AI GATC 7 cut(s) 3, 102, 457, 692, 870, 1156, 1192
Sau96I GGNCC 2 cut(s) 669, 884
SchI GAGTC 2 cut(s) 344, 622
ScrFI CCNGG 3 cut(s) 35, 141, 543
SduI GDGCHC 3 cut(s) 116, 148, 530
SexAI ACCWGGT 1 cut(s) 33
SfaNI GCATC 3 cut(s) 205, 262, 644
SinI GGWCC 1 cut(s) 669
SmiMI CAYNNNNRTG 1 cut(s) 1131
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SsiI CCGC 4 cut(s) 98, 137, 194, 218
SspI AATATT 1 cut(s) 1232
SspMI CTAG 5 cut(s) 131, 555, 575, 696, 803
SstI GAGCTC 1 cut(s) 530
StyD4I CCNGG 3 cut(s) 33, 139, 541
TaaI ACNGT 3 cut(s) 118, 252, 993
TaiI ACGT 4 cut(s) 158, 536, 721, 800
TaqI TCGA 4 cut(s) 93, 391, 449, 661
TfiI GAWTC 5 cut(s) 56, 90, 388, 451, 650
Tru1I TTAA 5 cut(s) 725, 1110, 1140, 1149, 1257
Tru9I TTAA 5 cut(s) 725, 1110, 1140, 1149, 1257
TscAI CASTG 1 cut(s) 685
TseFI GTSAC 1 cut(s) 766
TseI GCWGC 1 cut(s) 323
Tsp45I GTSAC 1 cut(s) 766
TspDTI ATGAA 5 cut(s) 69, 332, 723, 992, 1232
TspGWI ACGGA 2 cut(s) 32, 864
TspRI CASTG 1 cut(s) 685
VneI GTGCAC 1 cut(s) 144
VpaK11BI GGWCC 1 cut(s) 669
XapI RAATTY 4 cut(s) 549, 663, 998, 1300
XbaI TCTAGA 1 cut(s) 574
XceI RCATGY 3 cut(s) 1059, 1082, 1256
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 5 cut(s) 131, 555, 575, 696, 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.