Rh6BG490300

F-box-like WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0003410
Physical Location & Seq
Forward (+)
69398456 .. 69402174
3719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG490300.1

Sequence Viewer

Length: 1236 bp
ATGATCTCCATCAACTCCACCGAATTGAACTACCTGGTCTTCCGTTACCTCCATGAATCAGGCTTCACACATTCAGCTTATGCTTTCGGATTCGAGGCGGGGATCAACAAGAGCACGGTTGATGGTAACCTAGTTCCGCCTGGTGCACTTGTTACGTTTCTCCAGAAAGGCCTTCAGTTTCTTGAGCTGGAGGCGGACTTAGGCAATGGTAGTGATGCGGATATGGAGGATGACTTTTCGTTCCTGCAACCGTTGGATTTTATCACAAAAGATGCGTATCAATTGCAGAAAATTGTTAGGGAAAAGAAGGATAGGATGAATGCTGCTAACAATGAGTCCAAGCAGGAAAGCGAAAGGGAAGTAGAGGTGGAGAGAAAAGAAGAAGAGATTCGAGACGATAAGTCGGAGAAGGATAGGGAGCAGGAGAAGTCGAATCAGGATCGAAGTGAGATGGAGAAGGTGGAGCCTGAAGAAAATGGAACTGGTGGAGGGGTGGAGCCAATGGAGACCTCCCCGAGCTCAACGTTCGTGCCTGGTGAAATTCCTAGTAGTGATGTCATAGTTCTAGAAGGGCATACCTCAGAGGTTTTTGCTTGTGCATGGAGTCCATCTGGTTCGCTTCTTGCATCTGGTTCTGGGGATTCAACAGCTCGAATTTGGACCATTGCCAGTGGAAGTTGTAGATCTAGCATTCAAAATGAACCTGCACGTGTGTTAAAGCATTTCAAAGGGAGAGCCAATGAGAAAAGCAAGGATGTGACTACACTTGATTGGAATGATGATGGAACGTTACTAGCAACAGGTTCCTATGATGGGCAAGCAAGAATATGGGGTAGAGACGGAGAGTTAATGACTACTTTGATCAGACATAAAGGGCCAATCTTTTCTCTGAAGTGGAACAAAGAAGGTGATTATCTTCTGAGTGGAAGTGTGGATAAAACTGCAATTGTGTGGGACATAAAGACTGGCGAATGGAAACAACAGTTTGAATTTCATTCAGCTCCAACTCTGGATGTTGATTGGCGAGACAATACTTCTTTTGCAACATGCTCTACTGATGGTACGATACATGTTTGCAAGGTTGGAGAGAACCAACCAATTAAAACTTTCTTAGGCCATCAGGGTGAAGTTAATGCTATTAAGTGGGATCCGACCGGCTCATTATTGGCTTCTTGCTCTGATGATCATACAGCAAAGGTAACGTATAATTTATTAATCGCTGCTTTTGTTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0001067 GO:0002021 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006508 GO:0006511 GO:0006629 GO:0006807 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0015630 GO:0016042 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0017053 GO:0019216 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0023051 GO:0023056 GO:0030111 GO:0030154 GO:0030163 GO:0030177 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035264 GO:0035601 GO:0036211 GO:0040007 GO:0042393 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045444 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0047485 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050872 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051603 GO:0060255 GO:0060612 GO:0060613 GO:0060828 GO:0061448 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090263 GO:0097159 GO:0098732 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04013 ko04310 map04013 map04310
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

411

Amino Acids

45.54

Weight (kDa)

4.74

Isoelectric Point (pI)

31.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH PF08513 8 - 32 1.3e-06 LisH
WD40_WDHD1_1st PF24817 183 - 232 2.5e-06 WDHD1 first WD40 domain
WD40 PF00400 186 - 220 3e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 186 - 278 8.7e-06 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 186 - 232 8.9e-07 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 186 - 233 5.6e-10 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 187 - 235 1.5e-06 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 189 - 279 2.5e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 190 - 324 7.8e-11 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 192 - 399 9.3e-36 THOC3 beta-propeller domain
Beta-prop_Aladin PF25460 219 - 324 5.5e-08 Aladin seven-bladed propeller
WD40_CDC20-Fz PF24807 222 - 280 9.7e-06 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 245 - 345 3.8e-09 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 247 - 370 1.3e-23 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 247 - 400 1e-25 WDR3 first beta-propeller domain
WD40 PF00400 250 - 277 2.1e-07 WD domain, G-beta repeat
EIF3I PF24805 250 - 353 2.3e-11 EIF3I
WD40_WDHD1_1st PF24817 250 - 332 1.2e-11 WDHD1 first WD40 domain
WDR55 PF24796 252 - 398 8.3e-12 WDR55
Beta-prop_WDR19_1st PF23389 256 - 400 8e-09 WDR19 first beta-propeller
WD40 PF00400 281 - 319 1.2e-07 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 284 - 399 7.7e-10 WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 285 - 381 1.9e-09 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 286 - 365 1.7e-09 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 286 - 400 1.8e-17 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 290 - 407 2.3e-09 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 294 - 399 8.6e-16 Prp19 WD40 domain
WD40_Gbeta PF25391 304 - 400 1.2e-10 G protein beta WD-40 repeat protein
WD40_WDHD1_1st PF24817 338 - 400 7.5e-08 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 344 - 400 8.5e-11 WDR5 beta-propeller domain
WD40 PF00400 365 - 400 4.1e-09 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 712
AciI CCGC 4 cut(s) 98, 137, 194, 218
AclI AACGTT 2 cut(s) 524, 788
AclWI GGATC 4 cut(s) 110, 447, 1142, 1155
AcsI RAATTY 3 cut(s) 540, 654, 989
AcuI CTGAAG 3 cut(s) 158, 489, 911
AcvI CACGTG 1 cut(s) 710
AfaI GTAC 1 cut(s) 1063
AfiI CCNNNNNNNGG 1 cut(s) 813
AflIII ACRYGT 2 cut(s) 709, 1069
AgsI TTSAA 6 cut(s) 28, 645, 695, 727, 989, 1232
AhdI GACNNNNNGTC 1 cut(s) 400
AjnI CCWGG 3 cut(s) 33, 139, 532
AluBI AGCT 5 cut(s) 77, 187, 519, 650, 1001
AluI AGCT 5 cut(s) 77, 187, 519, 650, 1001
Alw21I GWGCWC 3 cut(s) 116, 148, 521
Alw26I GTCTC 4 cut(s) 387, 500, 831, 1020
Alw44I GTGCAC 1 cut(s) 144
AlwI GGATC 4 cut(s) 110, 447, 1142, 1155
Ama87I CYCGRG 1 cut(s) 514
AoxI GGCC 3 cut(s) 169, 875, 1114
ApaLI GTGCAC 1 cut(s) 144
ApeKI GCWGC 2 cut(s) 323, 1220
ApoI RAATTY 3 cut(s) 540, 654, 989
AseI ATTAAT 1 cut(s) 1214
Asp700I GAANNNNTTC 1 cut(s) 387
AspS9I GGNCC 2 cut(s) 660, 875
AsuHPI GGTGA 3 cut(s) 548, 920, 1136
AvaI CYCGRG 1 cut(s) 514
AvaII GGWCC 1 cut(s) 660
BaeGI GKGCMC 1 cut(s) 148
BamHI GGATCC 1 cut(s) 1147
BanII GRGCYC 1 cut(s) 521
BbrPI CACGTG 1 cut(s) 710
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 3 cut(s) 116, 148, 521
BbvI GCAGC 2 cut(s) 310, 1207
BccI CCATC 8 cut(s) 17, 116, 445, 616, 776, 806, 1052, 1125
BciT130I CCWGG 3 cut(s) 35, 141, 534
BclI TGATCA 2 cut(s) 861, 1183
BcoDI GTCTC 4 cut(s) 387, 500, 831, 1020
BfaI CTAG 5 cut(s) 131, 546, 566, 687, 794
BfuAI ACCTGC 1 cut(s) 712
BglII AGATCT 1 cut(s) 683
BisI GCNGC 2 cut(s) 324, 1221
BlsI GCNGC 2 cut(s) 325, 1222
Bme1390I CCNGG 3 cut(s) 35, 141, 534
Bme18I GGWCC 1 cut(s) 660
BmeRI GACNNNNNGTC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 514
BmgT120I GGNCC 2 cut(s) 660, 875
BmiI GGNNCC 4 cut(s) 465, 498, 805, 1149
BmrFI CCNGG 3 cut(s) 35, 141, 534
BmsI GCATC 3 cut(s) 205, 262, 635
BpiI GAAGAC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 146, 209
BpuEI CTTGAG 1 cut(s) 203
BsaAI YACGTR 1 cut(s) 710
BsaBI GATNNNNATC 2 cut(s) 8, 276
BsaI GGTCTC 1 cut(s) 500
Bsc4I CCNNNNNNNGG 1 cut(s) 813
Bse118I RCCGGY 1 cut(s) 1154
Bse1I ACTGG 3 cut(s) 487, 669, 970
Bse3DI GCAATG 2 cut(s) 211, 663
Bse8I GATNNNNATC 2 cut(s) 8, 276
BseBI CCWGG 3 cut(s) 35, 141, 534
BseGI GGATG 4 cut(s) 235, 321, 760, 1018
BseJI GATNNNNATC 2 cut(s) 8, 276
BseLI CCNNNNNNNGG 1 cut(s) 813
BseMI GCAATG 2 cut(s) 211, 663
BseMII CTCAG 2 cut(s) 594, 911
BseNI ACTGG 3 cut(s) 487, 669, 970
BseSI GKGCMC 1 cut(s) 148
BseXI GCAGC 2 cut(s) 310, 1207
BsgI GTGCAG 1 cut(s) 690
Bsh1285I CGRYCG 1 cut(s) 1155
BshFI GGCC 3 cut(s) 171, 877, 1116
BsiEI CGRYCG 1 cut(s) 1155
BsiHKAI GWGCWC 3 cut(s) 116, 148, 521
BsiHKCI CYCGRG 1 cut(s) 514
BsiSI CCGG 1 cut(s) 1155
BslFI GGGAC 1 cut(s) 968
BslI CCNNNNNNNGG 1 cut(s) 813
BsmAI GTCTC 4 cut(s) 387, 500, 831, 1020
BsmBI CGTCTC 2 cut(s) 387, 831
BsmFI GGGAC 1 cut(s) 968
BsmI GAATGC 2 cut(s) 325, 690
BsnI GGCC 3 cut(s) 171, 877, 1116
Bso31I GGTCTC 1 cut(s) 500
BsoBI CYCGRG 1 cut(s) 514
Bsp1286I GDGCHC 3 cut(s) 116, 148, 521
Bsp143I GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
BspACI CCGC 4 cut(s) 98, 137, 194, 218
BspANI GGCC 3 cut(s) 171, 877, 1116
BspCNI CTCAG 2 cut(s) 593, 912
BspLI GGNNCC 4 cut(s) 465, 498, 805, 1149
BspMI ACCTGC 1 cut(s) 712
BspPI GGATC 4 cut(s) 110, 447, 1142, 1155
BspTNI GGTCTC 1 cut(s) 500
BsrDI GCAATG 2 cut(s) 211, 663
BsrFI RCCGGY 1 cut(s) 1154
BsrI ACTGG 3 cut(s) 487, 669, 970
BssAI RCCGGY 1 cut(s) 1154
BssMI GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
Bst2UI CCWGG 3 cut(s) 35, 141, 534
Bst4CI ACNGT 3 cut(s) 118, 252, 984
Bst6I CTCTTC 1 cut(s) 378
BstBAI YACGTR 1 cut(s) 710
BstC8I GCNNGC 1 cut(s) 819
BstDEI CTNAG 4 cut(s) 199, 580, 920, 1111
BstEII GGTNACC 1 cut(s) 125
BstF5I GGATG 4 cut(s) 235, 321, 760, 1018
BstKTI GATC 7 cut(s) 6, 105, 442, 686, 864, 1150, 1186
BstMAI GTCTC 4 cut(s) 387, 500, 831, 1020
BstMBI GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
BstMCI CGRYCG 1 cut(s) 1155
BstNI CCWGG 3 cut(s) 35, 141, 534
BstNSI RCATGY 2 cut(s) 1050, 1073
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 3 cut(s) 33, 139, 532
BstSLI GKGCMC 1 cut(s) 148
BstV1I GCAGC 2 cut(s) 310, 1207
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 2 cut(s) 683, 1147
BstYI RGATCY 2 cut(s) 683, 1147
BsuRI GGCC 3 cut(s) 171, 877, 1116
BtsCI GGATG 4 cut(s) 235, 321, 760, 1018
BtsIMutI CAGTG 1 cut(s) 676
BveI ACCTGC 1 cut(s) 712
Cac8I GCNNGC 1 cut(s) 819
Cfr10I RCCGGY 1 cut(s) 1154
Cfr13I GGNCC 2 cut(s) 660, 875
CsiI ACCWGGT 1 cut(s) 33
Csp6I GTAC 1 cut(s) 1062
CviAII CATG 4 cut(s) 53, 600, 1047, 1070
CviQI GTAC 1 cut(s) 1062
DdeI CTNAG 4 cut(s) 199, 580, 920, 1111
DpnI GATC 7 cut(s) 5, 104, 441, 685, 863, 1149, 1185
DpnII GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
DriI GACNNNNNGTC 1 cut(s) 400
Eam1104I CTCTTC 1 cut(s) 378
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 1 cut(s) 378
EciI GGCGGA 2 cut(s) 126, 209
Ecl136II GAGCTC 1 cut(s) 519
Eco147I AGGCCT 1 cut(s) 171
Eco24I GRGCYC 1 cut(s) 521
Eco31I GGTCTC 1 cut(s) 500
Eco47I GGWCC 1 cut(s) 660
Eco53kI GAGCTC 1 cut(s) 519
Eco57I CTGAAG 3 cut(s) 158, 489, 911
Eco72I CACGTG 1 cut(s) 710
Eco88I CYCGRG 1 cut(s) 514
Eco91I GGTNACC 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 519
EcoO65I GGTNACC 1 cut(s) 125
EcoRII CCWGG 3 cut(s) 33, 139, 532
EcoT38I GRGCYC 1 cut(s) 521
Esp3I CGTCTC 2 cut(s) 387, 831
FaeI CATG 4 cut(s) 56, 603, 1050, 1073
FaqI GGGAC 1 cut(s) 968
FatI CATG 4 cut(s) 52, 599, 1046, 1069
FauI CCCGC 1 cut(s) 91
FbaI TGATCA 2 cut(s) 861, 1183
Fnu4HI GCNGC 2 cut(s) 324, 1221
FokI GGATG 4 cut(s) 242, 328, 767, 1025
FriOI GRGCYC 1 cut(s) 521
Fsp4HI GCNGC 2 cut(s) 324, 1221
FspBI CTAG 5 cut(s) 131, 546, 566, 687, 794
GluI GCNGC 2 cut(s) 324, 1221
GsuI CTGGAG 2 cut(s) 146, 209
HaeIII GGCC 3 cut(s) 171, 877, 1116
HapII CCGG 1 cut(s) 1155
Hin1II CATG 4 cut(s) 56, 603, 1050, 1073
HinfI GANTC 7 cut(s) 56, 90, 335, 388, 433, 604, 641
HpaII CCGG 1 cut(s) 1155
HphI GGTGA 3 cut(s) 548, 920, 1136
Hpy166II GTNNAC 1 cut(s) 146
Hpy188I TCNGA 8 cut(s) 89, 406, 583, 866, 891, 921, 1152, 1180
Hpy188III TCNNGA 6 cut(s) 163, 182, 392, 437, 566, 1010
Hpy8I GTNNAC 1 cut(s) 146
HpyAV CCTTC 6 cut(s) 182, 301, 403, 451, 563, 899
HpyCH4III ACNGT 3 cut(s) 118, 252, 984
HpyCH4IV ACGT 5 cut(s) 155, 524, 709, 788, 1202
HpyCH4V TGCA 9 cut(s) 146, 247, 286, 599, 626, 707, 944, 1043, 1077
HpyF3I CTNAG 4 cut(s) 199, 580, 920, 1111
HpySE526I ACGT 5 cut(s) 155, 524, 709, 788, 1202
Hsp92II CATG 4 cut(s) 56, 603, 1050, 1073
Ksp22I TGATCA 2 cut(s) 861, 1183
Kzo9I GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
LmnI GCTCC 4 cut(s) 418, 463, 496, 1006
Lsp1109I GCAGC 2 cut(s) 310, 1207
LweI GCATC 3 cut(s) 205, 262, 635
MabI ACCWGGT 1 cut(s) 33
MaeI CTAG 5 cut(s) 131, 546, 566, 687, 794
MaeII ACGT 5 cut(s) 155, 524, 709, 788, 1202
MaeIII GTNAC 6 cut(s) 44, 125, 151, 757, 789, 1198
MalI GATC 7 cut(s) 5, 104, 441, 685, 863, 1149, 1185
MboI GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
MboII GAAGA 5 cut(s) 31, 392, 395, 482, 908
MfeI CAATTG 2 cut(s) 281, 945
MflI RGATCY 2 cut(s) 683, 1147
MhlI GDGCHC 3 cut(s) 116, 148, 521
MluCI AATT 9 cut(s) 23, 281, 291, 540, 654, 945, 989, 1098, 1207
MlyI GAGTC 2 cut(s) 344, 613
MmeI TCCRAC 5 cut(s) 234, 384, 1028, 1063, 1175
MnlI CCTC 9 cut(s) 59, 88, 184, 220, 358, 482, 520, 577, 589
MroXI GAANNNNTTC 1 cut(s) 387
MseI TTAA 6 cut(s) 716, 848, 1101, 1131, 1140, 1214
MslI CAYNNNNRTG 1 cut(s) 1122
MspI CCGG 1 cut(s) 1155
MspR9I CCNGG 3 cut(s) 35, 141, 534
MunI CAATTG 2 cut(s) 281, 945
Mva1269I GAATGC 2 cut(s) 325, 690
MvaI CCWGG 3 cut(s) 35, 141, 534
NdeII GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
NlaIII CATG 4 cut(s) 56, 603, 1050, 1073
NlaIV GGNNCC 4 cut(s) 465, 498, 805, 1149
NmuCI GTSAC 1 cut(s) 757
NspI RCATGY 2 cut(s) 1050, 1073
PceI AGGCCT 1 cut(s) 171
PciI ACATGT 1 cut(s) 1069
PctI GAATGC 2 cut(s) 325, 690
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 5 cut(s) 56, 90, 388, 433, 641
PkrI GCNGC 2 cut(s) 325, 1222
PleI GAGTC 2 cut(s) 343, 612
PmaCI CACGTG 1 cut(s) 710
PmlI CACGTG 1 cut(s) 710
PpsI GAGTC 2 cut(s) 343, 612
Ppu21I YACGTR 1 cut(s) 710
PscI ACATGT 1 cut(s) 1069
PshBI ATTAAT 1 cut(s) 1214
Psp124BI GAGCTC 1 cut(s) 521
Psp1406I AACGTT 2 cut(s) 524, 788
Psp6I CCWGG 3 cut(s) 33, 139, 532
PspCI CACGTG 1 cut(s) 710
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 3 cut(s) 33, 139, 532
PspN4I GGNNCC 4 cut(s) 465, 498, 805, 1149
PspPI GGNCC 2 cut(s) 660, 875
PsuI RGATCY 2 cut(s) 683, 1147
RsaI GTAC 1 cut(s) 1063
RsaNI GTAC 1 cut(s) 1062
RseI CAYNNNNRTG 1 cut(s) 1122
SacI GAGCTC 1 cut(s) 521
SaqAI TTAA 6 cut(s) 716, 848, 1101, 1131, 1140, 1214
SatI GCNGC 2 cut(s) 324, 1221
Sau3AI GATC 7 cut(s) 3, 102, 439, 683, 861, 1147, 1183
Sau96I GGNCC 2 cut(s) 660, 875
SchI GAGTC 2 cut(s) 344, 613
ScrFI CCNGG 3 cut(s) 35, 141, 534
SduI GDGCHC 3 cut(s) 116, 148, 521
SexAI ACCWGGT 1 cut(s) 33
SfaNI GCATC 3 cut(s) 205, 262, 635
SinI GGWCC 1 cut(s) 660
SmiMI CAYNNNNRTG 1 cut(s) 1122
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
Sse9I AATT 9 cut(s) 23, 281, 291, 540, 654, 945, 989, 1098, 1207
SseBI AGGCCT 1 cut(s) 171
SsiI CCGC 4 cut(s) 98, 137, 194, 218
SspMI CTAG 5 cut(s) 131, 546, 566, 687, 794
SstI GAGCTC 1 cut(s) 521
StuI AGGCCT 1 cut(s) 171
StyD4I CCNGG 3 cut(s) 33, 139, 532
TaaI ACNGT 3 cut(s) 118, 252, 984
TaiI ACGT 5 cut(s) 158, 527, 712, 791, 1205
TaqI TCGA 5 cut(s) 93, 391, 431, 442, 652
TasI AATT 9 cut(s) 23, 281, 291, 540, 654, 945, 989, 1098, 1207
TfiI GAWTC 5 cut(s) 56, 90, 388, 433, 641
Tru1I TTAA 6 cut(s) 716, 848, 1101, 1131, 1140, 1214
Tru9I TTAA 6 cut(s) 716, 848, 1101, 1131, 1140, 1214
TscAI CASTG 1 cut(s) 676
TseFI GTSAC 1 cut(s) 757
TseI GCWGC 2 cut(s) 323, 1220
Tsp45I GTSAC 1 cut(s) 757
TspDTI ATGAA 4 cut(s) 69, 332, 714, 983
TspGWI ACGGA 2 cut(s) 32, 855
TspRI CASTG 1 cut(s) 676
VneI GTGCAC 1 cut(s) 144
VpaK11BI GGWCC 1 cut(s) 660
VspI ATTAAT 1 cut(s) 1214
XapI RAATTY 3 cut(s) 540, 654, 989
XbaI TCTAGA 1 cut(s) 565
XceI RCATGY 2 cut(s) 1050, 1073
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 5 cut(s) 131, 546, 566, 687, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.