Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0030997.1

Orthogroup ID

OG0003410

Physical Location & Seq

Genomic Coordinates Forward (+)

1608 .. 5066

Gene Structure 3459 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0030997.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

atgatctccatcaactccaccgaattgaactacctggtcttccgttacctccatgaatcaggcttcacacattcagcttatgctttcggattcgaggcggggatcaacaagagcacggttgacggtaacctagttccgcctggtgcacttgttacgtttctccagaaaggccttcagtttcttgagctggaggcggacttaggcaatggtagtgatgcggacatggaggatgacttttcgttcctgcagccgttggattttatcacaaaagatgcgtatcaattgcagaaaattgttagggaaaagaaggataggatgaatgctgctaacaatgagtccaagcaagaaagcgaaagggaagtagaggtggagagaaaagaagaagaagagattcgagacgataagtcggagaaggatagggagcaggagaagtcgaatcaggatcgaagtgagatggagaaggtggagcctgaagaaaatggaactggtggaggggtggagccaatgcagacgtccccgagctcaacgttcttgcctggtgaaattcctagtagtgatgtcatagttctagaagggcatacctcagaggtttttgcttgcgcatggagtccatctagttcgcttcttgcatctggttctggggattcaacagctcgaatttggaccattgccagtggaagttgtagatctagcattcaaaatgaacctgcacgtgtgttaaagcatttcaaagggagagccaatgagaaaagcaaggatgtgactacacttgattggaatgatgatggaacgttactagcaacaggttcctatgatgggcaagcaagaatatggggtagagacggagagttaatgactactttgatcagacataaagggccaatcttttctctgaagtggaacaaagaaggtgattatcttctgagtggaagtgtggataaaactgcaattgtgtgggacataaagactggcgaatggaaacaacagtttgaatttcattcagctccaactctggatgttgattggcgagacaatacttcttttgcaacatgctctactgatggtacgatacatgtttgcaaggttggagagaaccaaccaattaaaactttcttaggccatcagggtgaagttaatgctattaagtgggatccgactggctcattattggcttcttgctctgatgatcatacagcaaagatatggagtatgaagcaagacaaatgtttgcatgatttgaaggaacatgttaaggagatatataccatccggtggagtcctacaggacctggctcacataatccaaatcaacaattagtgctagcaagcgcttcctttgattcacgcataaaactatgggatgtggaactagggacacttatctacagcttatatggccacagggatccggtatactctgttgcattcagccctaatggtgagtacttggccagtggatctatggacaaatgcatgcacatatggtctgtgaaggaaggcagaatcgtaaaaacatacactggaaatggtggaatattcgaagtttgttggaacaaagacggcgataagatagctgcttgtttcgctaacaataatgtatgtgttgtggatttccgaatgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0001067 GO:0002021 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006508 GO:0006511 GO:0006629 GO:0006807 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0015630 GO:0016042 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0017053 GO:0019216 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0023051 GO:0023056 GO:0030111 GO:0030154 GO:0030163 GO:0030177 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035264 GO:0035601 GO:0036211 GO:0040007 GO:0042393 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045444 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0047485 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050872 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051603 GO:0060255 GO:0060612 GO:0060613 GO:0060828 GO:0061448 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090263 GO:0097159 GO:0098732 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04013 ko04310 map04013 map04310

Pfam Domains

Protein Families

LisH WD40

Protein Analysis

540

Amino Acids

60.21

Weight (kDa)

5.01

Isoelectric Point (pI)

34.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67320
fragaria_vesca	FvH4_1g16940 FvH4_2g33540 FvH4_2g33540 FvH4_2g33540 FvH4_2g33540 FvH4_2g33540
malus_domestica	MD02G1179800.v1.1 MD15G1075300.v1.1 MD15G1290400.v1.1
prunus_persica	Prupe.1G428200_v2.0.a1 Prupe.1G428200_v2.0.a1 Prupe.6G226500_v2.0.a1 Prupe.6G226500_v2.0.a1
pyrus_communis	pycom02g14570 pycom15g07030 pycom15g25410
rosa_chinensis	RchiOBHm_Chr2g0107021 RchiOBHm_Chr6g0308951
rosa_laevigata	RLG00000010601 RLG00000017550
rosa_multiflora	Rmu_sc0007106.1_g000002 Rmu_sc0030997.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136680 Rroxscaffold_7G00159780
rosa_rugosa	Rorug02G0140000
rosa_samantha	Rh2AG190800 Rh2BG202300 Rh2CG195500 Rh2DG197800 Rh6AG481200 Rh6BG490300 Rh6CG495600 Rh6DG481500
rosa_wichuraiana	Rw2G015040 Rw6G041920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	515
Acc16I	TGCGCA	1 cut(s)	601
Acc36I	ACCTGC	1 cut(s)	715
AccB7I	CCANNNNNTGG	1 cut(s)	1272
AccI	GTMKAC	1 cut(s)	1413
AciI	CCGC	4 cut(s)	98, 137, 194, 218
AclI	AACGTT	2 cut(s)	527, 791
AclWI	GGATC	7 cut(s)	110, 450, 1145, 1158, 1400, 1413, 1465
AcoI	YGGCCR	2 cut(s)	1396, 1449
AcsI	RAATTY	3 cut(s)	543, 657, 992
AcuI	CTGAAG	3 cut(s)	158, 492, 914
AcvI	CACGTG	1 cut(s)	713
AcyI	GRCGYC	1 cut(s)	512
AfaI	GTAC	2 cut(s)	1066, 1445
AfeI	AGCGCT	1 cut(s)	1330
AfiI	CCNNNNNNNGG	2 cut(s)	816, 1272
AflIII	ACRYGT	3 cut(s)	712, 1072, 1246
AgsI	TTSAA	6 cut(s)	28, 648, 698, 730, 992, 1240
AhdI	GACNNNNNGTC	1 cut(s)	403
AjnI	CCWGG	4 cut(s)	33, 139, 535, 1288
AluBI	AGCT	7 cut(s)	77, 187, 522, 653, 1004, 1389, 1574
AluI	AGCT	7 cut(s)	77, 187, 522, 653, 1004, 1389, 1574
Alw21I	GWGCWC	3 cut(s)	116, 148, 524
Alw26I	GTCTC	3 cut(s)	390, 834, 1023
Alw44I	GTGCAC	1 cut(s)	144
AlwI	GGATC	7 cut(s)	110, 450, 1145, 1158, 1400, 1413, 1465
AlwNI	CAGNNNCTG	1 cut(s)	1289
Ama87I	CYCGRG	1 cut(s)	517
Aor51HI	AGCGCT	1 cut(s)	1330
AoxI	GGCC	5 cut(s)	169, 878, 1117, 1396, 1449
ApaLI	GTGCAC	1 cut(s)	144
ApeKI	GCWGC	3 cut(s)	247, 323, 1574
ApoI	RAATTY	3 cut(s)	543, 657, 992
Asp700I	GAANNNNTTC	1 cut(s)	390
AspLEI	GCGC	2 cut(s)	602, 1331
AspS9I	GGNCC	3 cut(s)	663, 878, 1286
AsuHPI	GGTGA	4 cut(s)	551, 923, 1139, 1451
AsuII	TTCGAA	1 cut(s)	1539
AsuNHI	GCTAGC	1 cut(s)	1321
AvaI	CYCGRG	1 cut(s)	517
AvaII	GGWCC	2 cut(s)	663, 1286
BaeGI	GKGCMC	1 cut(s)	148
BalI	TGGCCA	2 cut(s)	1398, 1451
BamHI	GGATCC	2 cut(s)	1150, 1405
BanII	GRGCYC	1 cut(s)	524
BbrPI	CACGTG	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	3 cut(s)	116, 148, 524
BbvI	GCAGC	3 cut(s)	259, 310, 1561
BccI	CCATC	8 cut(s)	17, 448, 619, 779, 809, 1055, 1128, 1274
BceAI	ACGGC	2 cut(s)	235, 1576
BciT130I	CCWGG	4 cut(s)	35, 141, 537, 1290
BclI	TGATCA	2 cut(s)	864, 1186
BcoDI	GTCTC	3 cut(s)	390, 834, 1023
BfaI	CTAG	8 cut(s)	131, 549, 569, 615, 690, 797, 1322, 1370
BfmI	CTRYAG	3 cut(s)	245, 1281, 1384
BfoI	RGCGCY	1 cut(s)	1332
BfuAI	ACCTGC	1 cut(s)	715
BglII	AGATCT	1 cut(s)	686
BisI	GCNGC	3 cut(s)	248, 324, 1575
BlsI	GCNGC	3 cut(s)	249, 325, 1576
BmcAI	AGTACT	1 cut(s)	1445
Bme1390I	CCNGG	4 cut(s)	35, 141, 537, 1290
Bme18I	GGWCC	2 cut(s)	663, 1286
BmeRI	GACNNNNNGTC	1 cut(s)	403
BmeT110I	CYCGRG	1 cut(s)	517
BmgT120I	GGNCC	3 cut(s)	663, 878, 1286
BmiI	GGNNCC	5 cut(s)	468, 501, 808, 1152, 1407
BmrFI	CCNGG	4 cut(s)	35, 141, 537, 1290
BmsI	GCATC	3 cut(s)	205, 262, 638
BmtI	GCTAGC	1 cut(s)	1325
BpiI	GAAGAC	1 cut(s)	31
BpmI	CTGGAG	2 cut(s)	146, 209
Bpu14I	TTCGAA	1 cut(s)	1539
BpuEI	CTTGAG	1 cut(s)	203
BsaAI	YACGTR	1 cut(s)	713
BsaBI	GATNNNNATC	2 cut(s)	8, 276
BsaHI	GRCGYC	1 cut(s)	512
BsaWI	WCCGGW	2 cut(s)	1269, 1408
Bsc4I	CCNNNNNNNGG	2 cut(s)	816, 1272
Bse1I	ACTGG	6 cut(s)	490, 672, 973, 1162, 1452, 1525
Bse3DI	GCAATG	2 cut(s)	211, 666
Bse8I	GATNNNNATC	2 cut(s)	8, 276
BseBI	CCWGG	4 cut(s)	35, 141, 537, 1290
BseGI	GGATG	6 cut(s)	235, 321, 763, 1021, 1266, 1366
BseJI	GATNNNNATC	2 cut(s)	8, 276
BseLI	CCNNNNNNNGG	2 cut(s)	816, 1272
BseMI	GCAATG	2 cut(s)	211, 666
BseMII	CTCAG	2 cut(s)	597, 914
BseNI	ACTGG	6 cut(s)	490, 672, 973, 1162, 1452, 1525
BseSI	GKGCMC	1 cut(s)	148
BseXI	GCAGC	3 cut(s)	259, 310, 1561
BsgI	GTGCAG	1 cut(s)	693
BshFI	GGCC	5 cut(s)	171, 880, 1119, 1398, 1451
BsiHKAI	GWGCWC	3 cut(s)	116, 148, 524
BsiHKCI	CYCGRG	1 cut(s)	517
BsiSI	CCGG	2 cut(s)	1270, 1409
BslFI	GGGAC	3 cut(s)	499, 971, 1387
BslI	CCNNNNNNNGG	2 cut(s)	816, 1272
BsmAI	GTCTC	3 cut(s)	390, 834, 1023
BsmBI	CGTCTC	2 cut(s)	390, 834
BsmFI	GGGAC	3 cut(s)	499, 971, 1387
BsmI	GAATGC	3 cut(s)	325, 693, 1424
BsnI	GGCC	5 cut(s)	171, 880, 1119, 1398, 1451
BsoBI	CYCGRG	1 cut(s)	517
Bsp119I	TTCGAA	1 cut(s)	1539
Bsp1286I	GDGCHC	3 cut(s)	116, 148, 524
Bsp143I	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
BspACI	CCGC	4 cut(s)	98, 137, 194, 218
BspANI	GGCC	5 cut(s)	171, 880, 1119, 1398, 1451
BspCNI	CTCAG	2 cut(s)	596, 915
BspLI	GGNNCC	5 cut(s)	468, 501, 808, 1152, 1407
BspMAI	CTGCAG	1 cut(s)	249
BspMI	ACCTGC	1 cut(s)	715
BspOI	GCTAGC	1 cut(s)	1325
BspPI	GGATC	7 cut(s)	110, 450, 1145, 1158, 1400, 1413, 1465
BspT104I	TTCGAA	1 cut(s)	1539
BsrDI	GCAATG	2 cut(s)	211, 666
BsrI	ACTGG	6 cut(s)	490, 672, 973, 1162, 1452, 1525
BssMI	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
BssNAI	GTATAC	1 cut(s)	1414
BssNI	GRCGYC	1 cut(s)	512
Bst1107I	GTATAC	1 cut(s)	1414
Bst2UI	CCWGG	4 cut(s)	35, 141, 537, 1290
Bst4CI	ACNGT	3 cut(s)	118, 125, 987
Bst6I	CTCTTC	1 cut(s)	381
BstACI	GRCGYC	1 cut(s)	512
BstBAI	YACGTR	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	1539
BstC8I	GCNNGC	5 cut(s)	598, 822, 1323, 1327, 1475
BstDEI	CTNAG	4 cut(s)	199, 583, 923, 1114
BstEII	GGTNACC	1 cut(s)	125
BstF5I	GGATG	6 cut(s)	235, 321, 763, 1021, 1266, 1366
BstH2I	RGCGCY	1 cut(s)	1332
BstHHI	GCGC	2 cut(s)	602, 1331
BstKTI	GATC	9 cut(s)	6, 105, 445, 689, 867, 1153, 1189, 1408, 1460
BstMAI	GTCTC	3 cut(s)	390, 834, 1023
BstMBI	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
BstMWI	GCNNNNNNNGC	2 cut(s)	1395, 1583
BstNI	CCWGG	4 cut(s)	35, 141, 537, 1290
BstNSI	RCATGY	4 cut(s)	1053, 1076, 1250, 1477
BstPI	GGTNACC	1 cut(s)	125
BstSCI	CCNGG	4 cut(s)	33, 139, 535, 1288
BstSFI	CTRYAG	3 cut(s)	245, 1281, 1384
BstSLI	GKGCMC	1 cut(s)	148
BstV1I	GCAGC	3 cut(s)	259, 310, 1561
BstV2I	GAAGAC	1 cut(s)	31
BstX2I	RGATCY	4 cut(s)	686, 1150, 1405, 1457
BstYI	RGATCY	4 cut(s)	686, 1150, 1405, 1457
BstZ17I	GTATAC	1 cut(s)	1414
BsuRI	GGCC	5 cut(s)	171, 880, 1119, 1398, 1451
BtsCI	GGATG	6 cut(s)	235, 321, 763, 1021, 1266, 1366
BtsIMutI	CAGTG	3 cut(s)	679, 1459, 1518
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	5 cut(s)	598, 822, 1323, 1327, 1475
CaiI	CAGNNNCTG	1 cut(s)	1289
CfoI	GCGC	2 cut(s)	602, 1331
Cfr13I	GGNCC	3 cut(s)	663, 878, 1286
CsiI	ACCWGGT	1 cut(s)	33
Csp6I	GTAC	2 cut(s)	1065, 1444
CviAII	CATG	8 cut(s)	53, 223, 603, 1050, 1073, 1232, 1247, 1474
CviQI	GTAC	2 cut(s)	1065, 1444
DdeI	CTNAG	4 cut(s)	199, 583, 923, 1114
DpnI	GATC	9 cut(s)	5, 104, 444, 688, 866, 1152, 1188, 1407, 1459
DpnII	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
DriI	GACNNNNNGTC	1 cut(s)	403
EaeI	YGGCCR	2 cut(s)	1396, 1449
Eam1104I	CTCTTC	1 cut(s)	381
Eam1105I	GACNNNNNGTC	1 cut(s)	403
EarI	CTCTTC	1 cut(s)	381
EciI	GGCGGA	2 cut(s)	126, 209
Ecl136II	GAGCTC	1 cut(s)	522
Eco147I	AGGCCT	1 cut(s)	171
Eco24I	GRGCYC	1 cut(s)	524
Eco47I	GGWCC	2 cut(s)	663, 1286
Eco47III	AGCGCT	1 cut(s)	1330
Eco53kI	GAGCTC	1 cut(s)	522
Eco57I	CTGAAG	3 cut(s)	158, 492, 914
Eco72I	CACGTG	1 cut(s)	713
Eco88I	CYCGRG	1 cut(s)	517
Eco91I	GGTNACC	1 cut(s)	125
EcoICRI	GAGCTC	1 cut(s)	522
EcoO109I	RGGNCCY	1 cut(s)	1286
EcoO65I	GGTNACC	1 cut(s)	125
EcoRII	CCWGG	4 cut(s)	33, 139, 535, 1288
EcoT22I	ATGCAT	1 cut(s)	1475
EcoT38I	GRGCYC	1 cut(s)	524
Esp3I	CGTCTC	2 cut(s)	390, 834
FaeI	CATG	8 cut(s)	56, 226, 606, 1053, 1076, 1235, 1250, 1477
FaqI	GGGAC	3 cut(s)	499, 971, 1387
FatI	CATG	8 cut(s)	52, 222, 602, 1049, 1072, 1231, 1246, 1473
FauI	CCCGC	1 cut(s)	91
FauNDI	CATATG	1 cut(s)	1481
FbaI	TGATCA	2 cut(s)	864, 1186
FblI	GTMKAC	1 cut(s)	1413
Fnu4HI	GCNGC	3 cut(s)	248, 324, 1575
FokI	GGATG	6 cut(s)	242, 328, 770, 1028, 1253, 1373
FriOI	GRGCYC	1 cut(s)	524
Fsp4HI	GCNGC	3 cut(s)	248, 324, 1575
FspBI	CTAG	8 cut(s)	131, 549, 569, 615, 690, 797, 1322, 1370
FspI	TGCGCA	1 cut(s)	601
GlaI	GCGC	2 cut(s)	601, 1330
GluI	GCNGC	3 cut(s)	248, 324, 1575
GsuI	CTGGAG	2 cut(s)	146, 209
HaeII	RGCGCY	1 cut(s)	1332
HaeIII	GGCC	5 cut(s)	171, 880, 1119, 1398, 1451
HapII	CCGG	2 cut(s)	1270, 1409
HhaI	GCGC	2 cut(s)	602, 1331
Hin1I	GRCGYC	1 cut(s)	512
Hin1II	CATG	8 cut(s)	56, 226, 606, 1053, 1076, 1235, 1250, 1477
Hin6I	GCGC	2 cut(s)	600, 1329
HinP1I	GCGC	2 cut(s)	600, 1329
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HpaII	CCGG	2 cut(s)	1270, 1409
HphI	GGTGA	4 cut(s)	551, 923, 1139, 1451
Hpy166II	GTNNAC	3 cut(s)	121, 146, 1414
Hpy188I	TCNGA	9 cut(s)	89, 409, 586, 869, 894, 924, 1155, 1183, 1616
Hpy188III	TCNNGA	6 cut(s)	163, 182, 395, 440, 569, 1013
Hpy8I	GTNNAC	3 cut(s)	121, 146, 1414
HpyAV	CCTTC	9 cut(s)	182, 301, 406, 454, 566, 902, 1234, 1486, 1490
HpyCH4III	ACNGT	3 cut(s)	118, 125, 987
HpyCH4IV	ACGT	5 cut(s)	155, 512, 527, 712, 791
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1395, 1583
HpyF3I	CTNAG	4 cut(s)	199, 583, 923, 1114
HpySE526I	ACGT	5 cut(s)	155, 512, 527, 712, 791
Hsp92I	GRCGYC	1 cut(s)	512
Hsp92II	CATG	8 cut(s)	56, 226, 606, 1053, 1076, 1235, 1250, 1477
HspAI	GCGC	2 cut(s)	600, 1329
Ksp22I	TGATCA	2 cut(s)	864, 1186
Kzo9I	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
LmnI	GCTCC	4 cut(s)	421, 466, 499, 1009
Lsp1109I	GCAGC	3 cut(s)	259, 310, 1561
LweI	GCATC	3 cut(s)	205, 262, 638
MabI	ACCWGGT	1 cut(s)	33
MaeI	CTAG	8 cut(s)	131, 549, 569, 615, 690, 797, 1322, 1370
MaeII	ACGT	5 cut(s)	155, 512, 527, 712, 791
MaeIII	GTNAC	5 cut(s)	44, 125, 151, 760, 792
MalI	GATC	9 cut(s)	5, 104, 444, 688, 866, 1152, 1188, 1407, 1459
MboI	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
MboII	GAAGA	6 cut(s)	31, 392, 395, 398, 485, 911
MfeI	CAATTG	2 cut(s)	281, 948
MflI	RGATCY	4 cut(s)	686, 1150, 1405, 1457
MhlI	GDGCHC	3 cut(s)	116, 148, 524
MlsI	TGGCCA	2 cut(s)	1398, 1451
MluCI	AATT	9 cut(s)	23, 281, 291, 543, 657, 948, 992, 1101, 1313
MluNI	TGGCCA	2 cut(s)	1398, 1451
MlyI	GAGTC	3 cut(s)	344, 616, 1285
MmeI	TCCRAC	6 cut(s)	234, 387, 1031, 1066, 1178, 1529
MnlI	CCTC	8 cut(s)	59, 88, 184, 220, 358, 485, 580, 592
Mox20I	TGGCCA	2 cut(s)	1398, 1451
Mph1103I	ATGCAT	1 cut(s)	1475
MroXI	GAANNNNTTC	1 cut(s)	390
MscI	TGGCCA	2 cut(s)	1398, 1451
MseI	TTAA	6 cut(s)	719, 851, 1104, 1134, 1143, 1251
MslI	CAYNNNNRTG	1 cut(s)	1125
Msp20I	TGGCCA	2 cut(s)	1398, 1451
MspI	CCGG	2 cut(s)	1270, 1409
MspR9I	CCNGG	4 cut(s)	35, 141, 537, 1290
MunI	CAATTG	2 cut(s)	281, 948
Mva1269I	GAATGC	3 cut(s)	325, 693, 1424
MvaI	CCWGG	4 cut(s)	35, 141, 537, 1290
MwoI	GCNNNNNNNGC	2 cut(s)	1395, 1583
NdeI	CATATG	1 cut(s)	1481
NdeII	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
NheI	GCTAGC	1 cut(s)	1321
NlaIII	CATG	8 cut(s)	56, 226, 606, 1053, 1076, 1235, 1250, 1477
NlaIV	GGNNCC	5 cut(s)	468, 501, 808, 1152, 1407
NmuCI	GTSAC	1 cut(s)	760
NsbI	TGCGCA	1 cut(s)	601
NsiI	ATGCAT	1 cut(s)	1475
NspI	RCATGY	4 cut(s)	1053, 1076, 1250, 1477
NspV	TTCGAA	1 cut(s)	1539
PaeI	GCATGC	1 cut(s)	1477
PceI	AGGCCT	1 cut(s)	171
PciI	ACATGT	2 cut(s)	1072, 1246
PctI	GAATGC	3 cut(s)	325, 693, 1424
PdmI	GAANNNNTTC	1 cut(s)	390
PfeI	GAWTC	7 cut(s)	56, 90, 391, 436, 644, 1340, 1503
PflMI	CCANNNNNTGG	1 cut(s)	1272
PkrI	GCNGC	3 cut(s)	249, 325, 1576
PleI	GAGTC	3 cut(s)	343, 615, 1284
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	3 cut(s)	343, 615, 1284
Ppu21I	YACGTR	1 cut(s)	713
PpuMI	RGGWCCY	1 cut(s)	1286
PscI	ACATGT	2 cut(s)	1072, 1246
Psp124BI	GAGCTC	1 cut(s)	524
Psp1406I	AACGTT	2 cut(s)	527, 791
Psp5II	RGGWCCY	1 cut(s)	1286
Psp6I	CCWGG	4 cut(s)	33, 139, 535, 1288
PspCI	CACGTG	1 cut(s)	713
PspEI	GGTNACC	1 cut(s)	125
PspGI	CCWGG	4 cut(s)	33, 139, 535, 1288
PspN4I	GGNNCC	5 cut(s)	468, 501, 808, 1152, 1407
PspPI	GGNCC	3 cut(s)	663, 878, 1286
PspPPI	RGGWCCY	1 cut(s)	1286
PstI	CTGCAG	1 cut(s)	249
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	4 cut(s)	686, 1150, 1405, 1457
RsaI	GTAC	2 cut(s)	1066, 1445
RsaNI	GTAC	2 cut(s)	1065, 1444
RseI	CAYNNNNRTG	1 cut(s)	1125
SacI	GAGCTC	1 cut(s)	524
SaqAI	TTAA	6 cut(s)	719, 851, 1104, 1134, 1143, 1251
SatI	GCNGC	3 cut(s)	248, 324, 1575
Sau3AI	GATC	9 cut(s)	3, 102, 442, 686, 864, 1150, 1186, 1405, 1457
Sau96I	GGNCC	3 cut(s)	663, 878, 1286
ScaI	AGTACT	1 cut(s)	1445
SchI	GAGTC	3 cut(s)	344, 616, 1285
ScrFI	CCNGG	4 cut(s)	35, 141, 537, 1290
SduI	GDGCHC	3 cut(s)	116, 148, 524
SexAI	ACCWGGT	1 cut(s)	33
SfaNI	GCATC	3 cut(s)	205, 262, 638
SfcI	CTRYAG	3 cut(s)	245, 1281, 1384
SfuI	TTCGAA	1 cut(s)	1539
SinI	GGWCC	2 cut(s)	663, 1286
SmiMI	CAYNNNNRTG	1 cut(s)	1125
SmlI	CTYRAG	1 cut(s)	182
SmoI	CTYRAG	1 cut(s)	182
SphI	GCATGC	1 cut(s)	1477
Sse9I	AATT	9 cut(s)	23, 281, 291, 543, 657, 948, 992, 1101, 1313
SseBI	AGGCCT	1 cut(s)	171
SsiI	CCGC	4 cut(s)	98, 137, 194, 218
SspI	AATATT	1 cut(s)	1536
SspMI	CTAG	8 cut(s)	131, 549, 569, 615, 690, 797, 1322, 1370
SstI	GAGCTC	1 cut(s)	524
StuI	AGGCCT	1 cut(s)	171
StyD4I	CCNGG	4 cut(s)	33, 139, 535, 1288
TaaI	ACNGT	3 cut(s)	118, 125, 987
TaiI	ACGT	5 cut(s)	158, 515, 530, 715, 794
TaqI	TCGA	6 cut(s)	93, 394, 434, 445, 655, 1539
TasI	AATT	9 cut(s)	23, 281, 291, 543, 657, 948, 992, 1101, 1313
TatI	WGTACW	1 cut(s)	1443
TfiI	GAWTC	7 cut(s)	56, 90, 391, 436, 644, 1340, 1503
Tru1I	TTAA	6 cut(s)	719, 851, 1104, 1134, 1143, 1251
Tru9I	TTAA	6 cut(s)	719, 851, 1104, 1134, 1143, 1251
TscAI	CASTG	3 cut(s)	679, 1459, 1525
TseFI	GTSAC	1 cut(s)	760
TseI	GCWGC	3 cut(s)	247, 323, 1574
Tsp45I	GTSAC	1 cut(s)	760
TspDTI	ATGAA	5 cut(s)	69, 332, 717, 986, 1226
TspGWI	ACGGA	2 cut(s)	32, 858
TspRI	CASTG	3 cut(s)	679, 1459, 1525
Van91I	CCANNNNNTGG	1 cut(s)	1272
VneI	GTGCAC	1 cut(s)	144
VpaK11BI	GGWCC	2 cut(s)	663, 1286
XapI	RAATTY	3 cut(s)	543, 657, 992
XbaI	TCTAGA	1 cut(s)	568
XceI	RCATGY	4 cut(s)	1053, 1076, 1250, 1477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1459
XmiI	GTMKAC	1 cut(s)	1413
XmnI	GAANNNNTTC	1 cut(s)	390
XspI	CTAG	8 cut(s)	131, 549, 569, 615, 690, 797, 1322, 1370
ZraI	GACGTC	1 cut(s)	513
ZrmI	AGTACT	1 cut(s)	1445
Zsp2I	ATGCAT	1 cut(s)	1475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.