RLG00000010601

F-box-like WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003410
Physical Location & Seq
Reverse (-)
2883503 .. 2887051
3549 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010601

Sequence Viewer

Length: 1644 bp
ATGATCTCCATCAACTCCACCGAATTGAACTACCTGGTCTTCCGTTACCTCCATGAATCAGGCTTCACACATTCAGCTTATGCTTTCGGATTCGAGGCGGGGATCAACAAGAGCACGGTTGATGGTAACCTAGTTCCGCCTGGTGCACTTGTTACGTTTCTCCAGAAAGGCCTTCAGTTTCTTGAGCTGGAGGCGGACTTAGGCAATGATTTACAGAGTGATGCGGATATGGAGGATGACTTTTCGTTCCTGCAACCGTTGGATTTTATCACAAAAGATGCGTATCAATTGCAGAAAATTGTTAGGGAAAAGAAGGATAGGATGAATGCTGCTAACAATGAGTCCAAGCAGGAAAGCGAAAGGGAAGTAGAGGTGGAGAGAAACGAAGAAGAGATTCGAGACGATAAGTCGGAGAAGGATAGGGAGCAGGAAATTGGTAAAGAGGAGGAGAAGTCGAATCAGGATCGAAGTGAGATGGAGAAGGTGGAGCCTGAAGAAAATGGAACTGGTGGAGGGTTGGAGCCAATGGAGACCTCCCCGAGCTCAACGTTCGTGCCTGGTGAAATTCCTAGTAGTGATGTCATAGTTCTAGAAGGGCATACCTCAGAGGTTTTTGCTTGTGCATGGAGTCCATCTGGTTCGCTTCTTGCATCTGGTTCTGGGGATTCAACAGCTCGAATTTGGACCATTGCCAGTGGAAGTTGTAGATCTAGCATTCAAAATGAACCTGCACGTGTGTTAAAGCATTTCAAAGGGAGAGCCAATGAGAAAAGCAAGGATGTGACTACACTTGATTGGAATGATGATGGAACGTTACTAGCAACAGGTTCCTATGATGGGCAAGCAAGAATATGGGGTAGAGAGGGAGAGTTAATGACTACTTTGATCAGACATAAAGGGCCAATCTTTTCTCTGAAGTGGAACAAAGAAGGTGATTATCTTCTGAGTGGAAGTGTGGATAAAACTGCAATTGTGTGGGACATAAAGACTGGCGAATGGAAACAACAGTTTGAATTTCATTCAGCTCCAACTCTGGATGTTGATTGGCGAGACAATACTTCTTTTGCAACATGCTCTACTGATGGTACGATACATGTTTGCAAGGTTGGAGAGAACCAACCAATTAAAACTTTCTTAGGCCATCAGGGTGAAGTTAACGCTATTAAGTGGGATCCGACCGGCTCATTTTTGGCTTCTTGCTCTGATGATCATACAGCAAAGATATGGAGTATGAAGCAAGACAAATATTTGCATGATTTGAAGGAACATGTTAAGGAGATATATACCATCCGGTGGAGTCCTACAGGACCTGGCTCACATAATCCAAATCAACAATTAGTGCTAGCAAGCGCTTCCTTTGATTCACGCATAAAACTATGGGATGTGGAACTAGGGACACTTATCTACAGCTTATATGGGCACAGGGATCCGGTTTACTCTGTTGCATTCAGCCCTAATGGTGAGTACTTGGCCAGTGGATCTATGGACAAATGCATGCACATATGGTCTGTGAAGGAAGGCAGAGTTGTAAAAACATACACTGGAAATGGTGGAATATTTGAAGTTTGTTGGAACAAAGACGGCGATAAGATAGCTGCTTGTTTCGCAAATAATAATGTATGTGTTGTGGATTTCCGAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0001067 GO:0002021 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006508 GO:0006511 GO:0006629 GO:0006807 GO:0006996 GO:0007275 GO:0008013 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010646 GO:0010647 GO:0015630 GO:0016042 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0017053 GO:0019216 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0023051 GO:0023056 GO:0030111 GO:0030154 GO:0030163 GO:0030177 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031667 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0035264 GO:0035601 GO:0036211 GO:0040007 GO:0042393 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044212 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045444 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0047485 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050872 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051603 GO:0060255 GO:0060612 GO:0060613 GO:0060828 GO:0061448 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090207 GO:0090263 GO:0097159 GO:0098732 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140110 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04013 ko04310 map04013 map04310
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

548

Amino Acids

61.12

Weight (kDa)

4.91

Isoelectric Point (pI)

36.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH PF08513 8 - 32 1.8e-06 LisH
WD40_WDHD1_1st PF24817 191 - 240 3.8e-06 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 194 - 241 8.1e-10 WDR5 beta-propeller domain
WD40 PF00400 194 - 228 4.3e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 194 - 287 9.8e-06 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 194 - 240 1.4e-06 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 195 - 242 2.5e-06 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 197 - 298 1.6e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 198 - 332 2e-10 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_Aladin PF25460 208 - 332 1.7e-09 Aladin seven-bladed propeller
Beta-prop_EML_2 PF23414 253 - 354 4.5e-09 Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19 PF24814 254 - 333 2.4e-10 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 255 - 378 1.6e-23 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 255 - 347 1.7e-14 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 257 - 503 2.8e-12 WDR36/Utp21 first beta-propeller
WD40_WDHD1_1st PF24817 258 - 340 2.8e-11 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 258 - 339 6.5e-14 THOC3 beta-propeller domain
WD40 PF00400 258 - 285 3.1e-07 WD domain, G-beta repeat
EIF3I PF24805 259 - 361 3.7e-11 EIF3I
WDR55 PF24796 259 - 418 1.6e-13 WDR55
Beta-prop_WDR3_2nd PF25172 261 - 336 6.8e-07 WDR3 second beta-propeller domain
Beta-prop_WDR19_1st PF23389 264 - 362 2.6e-06 WDR19 first beta-propeller
WD40 PF00400 290 - 327 1.7e-07 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 292 - 413 1.1e-11 WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 293 - 461 3.2e-13 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 294 - 471 3.2e-28 CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 294 - 373 2.6e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 298 - 378 1.7e-11 THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 298 - 436 2.7e-12 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 304 - 542 2.3e-37 Prp19 WD40 domain
WD40_Gbeta PF25391 312 - 417 3.3e-12 G protein beta WD-40 repeat protein
Beta-prop_EML_2 PF23414 316 - 435 3.9e-10 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 318 - 415 9.6e-06 WDR90/POC16, second beta-propeller
WD40_WDHD1_1st PF24817 345 - 541 7.6e-30 WDHD1 first WD40 domain
Beta-prop_WDR3_1st PF25173 350 - 463 1.7e-20 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 351 - 545 5.2e-41 WDR5 beta-propeller domain
Beta-prop_Vps41 PF23411 353 - 417 3.8e-06 Vps42 beta-propeller
ANAPC4_WD40 PF12894 356 - 433 3e-06 Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR3_2nd PF25172 357 - 536 2.4e-16 WDR3 second beta-propeller domain
WD40 PF00400 373 - 410 2.4e-11 WD domain, G-beta repeat
EIF3I PF24805 380 - 488 1.5e-07 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 380 - 511 2.5e-14 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 381 - 437 7.8e-12 THOC3 beta-propeller domain
WDR90_beta-prop_4th PF23342 385 - 511 7e-09 WDR90, 4th beta-propeller
Beta-prop_SCAP PF24017 400 - 505 9.8e-06 SCAP Beta-propeller
WD40_MABP1-WDR62_1st PF24780 407 - 527 5.9e-06 MABP1/WDR62 first WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 419 - 512 4.1e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML_2 PF23414 441 - 543 5.3e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_IFT122_1st PF23381 444 - 536 1.4e-12 IFT122 first beta-propeller
Beta-prop_WDR3_1st PF25173 444 - 540 8.7e-17 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 445 - 543 2.2e-10 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 446 - 507 8.6e-08 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 447 - 546 5.4e-20 THOC3 beta-propeller domain
EIF3I PF24805 447 - 535 2.3e-08 EIF3I
Beta-prop_WDR36-Utp21_2nd PF25168 448 - 496 2.9e-06 WDR36/Utp21 second beta-propeller domain
WD40_Gbeta PF25391 450 - 546 1.3e-09 G protein beta WD-40 repeat protein
WD40 PF00400 465 - 503 7.7e-12 WD domain, G-beta repeat
WD40_RFWD3 PF23419 474 - 546 2.3e-06 E3 ubiquitin-protein ligase RFWD3 WD40 domain
Beta-prop_Aladin PF25460 475 - 537 2.5e-07 Aladin seven-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 736
AccB7I CCANNNNNTGG 1 cut(s) 1293
AciI CCGC 4 cut(s) 98, 137, 194, 224
AclI AACGTT 2 cut(s) 548, 812
AclWI GGATC 7 cut(s) 110, 471, 1166, 1179, 1421, 1434, 1486
AcoI YGGCCR 1 cut(s) 1470
AcsI RAATTY 3 cut(s) 564, 678, 1013
AcuI CTGAAG 3 cut(s) 158, 513, 935
AcvI CACGTG 1 cut(s) 734
AfaI GTAC 2 cut(s) 1087, 1466
AfeI AGCGCT 1 cut(s) 1351
AfiI CCNNNNNNNGG 2 cut(s) 837, 1293
AflIII ACRYGT 3 cut(s) 733, 1093, 1267
AgsI TTSAA 7 cut(s) 28, 669, 719, 751, 1013, 1261, 1562
AhdI GACNNNNNGTC 1 cut(s) 406
AjnI CCWGG 4 cut(s) 33, 139, 556, 1309
AluBI AGCT 7 cut(s) 77, 187, 543, 674, 1025, 1410, 1595
AluI AGCT 7 cut(s) 77, 187, 543, 674, 1025, 1410, 1595
Alw21I GWGCWC 3 cut(s) 116, 148, 545
Alw26I GTCTC 3 cut(s) 393, 524, 1044
Alw44I GTGCAC 1 cut(s) 144
AlwI GGATC 7 cut(s) 110, 471, 1166, 1179, 1421, 1434, 1486
AlwNI CAGNNNCTG 1 cut(s) 1310
Ama87I CYCGRG 1 cut(s) 538
Aor51HI AGCGCT 1 cut(s) 1351
AoxI GGCC 4 cut(s) 169, 899, 1138, 1470
ApaLI GTGCAC 1 cut(s) 144
ApeKI GCWGC 2 cut(s) 329, 1595
ApoI RAATTY 3 cut(s) 564, 678, 1013
Asp700I GAANNNNTTC 1 cut(s) 393
AspLEI GCGC 1 cut(s) 1352
AspS9I GGNCC 3 cut(s) 684, 899, 1307
AsuHPI GGTGA 4 cut(s) 572, 944, 1160, 1472
AsuNHI GCTAGC 1 cut(s) 1342
AvaI CYCGRG 1 cut(s) 538
AvaII GGWCC 2 cut(s) 684, 1307
BaeGI GKGCMC 2 cut(s) 148, 1422
BalI TGGCCA 1 cut(s) 1472
BamHI GGATCC 2 cut(s) 1171, 1426
BanII GRGCYC 1 cut(s) 545
BbrPI CACGTG 1 cut(s) 734
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 3 cut(s) 116, 148, 545
BbvI GCAGC 2 cut(s) 316, 1582
BccI CCATC 9 cut(s) 17, 116, 469, 640, 800, 830, 1076, 1149, 1295
BceAI ACGGC 1 cut(s) 1597
BciT130I CCWGG 4 cut(s) 35, 141, 558, 1311
BclI TGATCA 2 cut(s) 885, 1207
BcoDI GTCTC 3 cut(s) 393, 524, 1044
BfaI CTAG 7 cut(s) 131, 570, 590, 711, 818, 1343, 1391
BfmI CTRYAG 2 cut(s) 1302, 1405
BfoI RGCGCY 1 cut(s) 1353
BfuAI ACCTGC 1 cut(s) 736
BglII AGATCT 1 cut(s) 707
BisI GCNGC 2 cut(s) 330, 1596
BlsI GCNGC 2 cut(s) 331, 1597
BmcAI AGTACT 1 cut(s) 1466
Bme1390I CCNGG 4 cut(s) 35, 141, 558, 1311
Bme18I GGWCC 2 cut(s) 684, 1307
BmeRI GACNNNNNGTC 1 cut(s) 406
BmeT110I CYCGRG 1 cut(s) 538
BmgT120I GGNCC 3 cut(s) 684, 899, 1307
BmiI GGNNCC 5 cut(s) 489, 522, 829, 1173, 1428
BmrFI CCNGG 4 cut(s) 35, 141, 558, 1311
BmsI GCATC 3 cut(s) 211, 268, 659
BmtI GCTAGC 1 cut(s) 1346
BpiI GAAGAC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 146, 209
BpuEI CTTGAG 1 cut(s) 203
BsaAI YACGTR 1 cut(s) 734
BsaBI GATNNNNATC 2 cut(s) 8, 282
BsaI GGTCTC 1 cut(s) 524
BsaWI WCCGGW 2 cut(s) 1290, 1429
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 2 cut(s) 837, 1293
Bse118I RCCGGY 1 cut(s) 1178
Bse1I ACTGG 5 cut(s) 511, 693, 994, 1473, 1546
Bse3DI GCAATG 2 cut(s) 211, 687
Bse8I GATNNNNATC 2 cut(s) 8, 282
BseBI CCWGG 4 cut(s) 35, 141, 558, 1311
BseGI GGATG 6 cut(s) 241, 327, 784, 1042, 1287, 1387
BseJI GATNNNNATC 2 cut(s) 8, 282
BseLI CCNNNNNNNGG 2 cut(s) 837, 1293
BseMI GCAATG 2 cut(s) 211, 687
BseMII CTCAG 2 cut(s) 618, 935
BseNI ACTGG 5 cut(s) 511, 693, 994, 1473, 1546
BseRI GAGGAG 2 cut(s) 458, 461
BseSI GKGCMC 2 cut(s) 148, 1422
BseXI GCAGC 2 cut(s) 316, 1582
BsgI GTGCAG 1 cut(s) 714
Bsh1285I CGRYCG 1 cut(s) 1179
BshFI GGCC 4 cut(s) 171, 901, 1140, 1472
BsiEI CGRYCG 1 cut(s) 1179
BsiHKAI GWGCWC 3 cut(s) 116, 148, 545
BsiHKCI CYCGRG 1 cut(s) 538
BsiSI CCGG 3 cut(s) 1179, 1291, 1430
BslFI GGGAC 2 cut(s) 992, 1408
BslI CCNNNNNNNGG 2 cut(s) 837, 1293
BsmAI GTCTC 3 cut(s) 393, 524, 1044
BsmBI CGTCTC 1 cut(s) 393
BsmFI GGGAC 2 cut(s) 992, 1408
BsmI GAATGC 3 cut(s) 331, 714, 1445
BsnI GGCC 4 cut(s) 171, 901, 1140, 1472
Bso31I GGTCTC 1 cut(s) 524
BsoBI CYCGRG 1 cut(s) 538
Bsp1286I GDGCHC 4 cut(s) 116, 148, 545, 1422
Bsp143I GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
BspACI CCGC 4 cut(s) 98, 137, 194, 224
BspANI GGCC 4 cut(s) 171, 901, 1140, 1472
BspCNI CTCAG 2 cut(s) 617, 936
BspLI GGNNCC 5 cut(s) 489, 522, 829, 1173, 1428
BspMI ACCTGC 1 cut(s) 736
BspOI GCTAGC 1 cut(s) 1346
BspPI GGATC 7 cut(s) 110, 471, 1166, 1179, 1421, 1434, 1486
BspTNI GGTCTC 1 cut(s) 524
BsrDI GCAATG 2 cut(s) 211, 687
BsrFI RCCGGY 1 cut(s) 1178
BsrI ACTGG 5 cut(s) 511, 693, 994, 1473, 1546
BssAI RCCGGY 1 cut(s) 1178
BssMI GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
Bst2UI CCWGG 4 cut(s) 35, 141, 558, 1311
Bst4CI ACNGT 3 cut(s) 118, 258, 1008
Bst6I CTCTTC 1 cut(s) 384
BstBAI YACGTR 1 cut(s) 734
BstC8I GCNNGC 4 cut(s) 843, 1344, 1348, 1496
BstDEI CTNAG 4 cut(s) 199, 604, 944, 1135
BstEII GGTNACC 1 cut(s) 125
BstF5I GGATG 6 cut(s) 241, 327, 784, 1042, 1287, 1387
BstH2I RGCGCY 1 cut(s) 1353
BstHHI GCGC 1 cut(s) 1352
BstKTI GATC 9 cut(s) 6, 105, 466, 710, 888, 1174, 1210, 1429, 1481
BstMAI GTCTC 3 cut(s) 393, 524, 1044
BstMBI GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
BstMCI CGRYCG 1 cut(s) 1179
BstMWI GCNNNNNNNGC 1 cut(s) 1604
BstNI CCWGG 4 cut(s) 35, 141, 558, 1311
BstNSI RCATGY 4 cut(s) 1074, 1097, 1271, 1498
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 4 cut(s) 33, 139, 556, 1309
BstSFI CTRYAG 2 cut(s) 1302, 1405
BstSLI GKGCMC 2 cut(s) 148, 1422
BstV1I GCAGC 2 cut(s) 316, 1582
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 4 cut(s) 707, 1171, 1426, 1478
BstYI RGATCY 4 cut(s) 707, 1171, 1426, 1478
BsuRI GGCC 4 cut(s) 171, 901, 1140, 1472
BtsCI GGATG 6 cut(s) 241, 327, 784, 1042, 1287, 1387
BtsIMutI CAGTG 3 cut(s) 700, 1480, 1539
BveI ACCTGC 1 cut(s) 736
Cac8I GCNNGC 4 cut(s) 843, 1344, 1348, 1496
CaiI CAGNNNCTG 1 cut(s) 1310
CfoI GCGC 1 cut(s) 1352
Cfr10I RCCGGY 1 cut(s) 1178
Cfr13I GGNCC 3 cut(s) 684, 899, 1307
CsiI ACCWGGT 1 cut(s) 33
Csp6I GTAC 2 cut(s) 1086, 1465
CviAII CATG 7 cut(s) 53, 624, 1071, 1094, 1253, 1268, 1495
CviQI GTAC 2 cut(s) 1086, 1465
DdeI CTNAG 4 cut(s) 199, 604, 944, 1135
DpnI GATC 9 cut(s) 5, 104, 465, 709, 887, 1173, 1209, 1428, 1480
DpnII GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
DriI GACNNNNNGTC 1 cut(s) 406
EaeI YGGCCR 1 cut(s) 1470
Eam1104I CTCTTC 1 cut(s) 384
Eam1105I GACNNNNNGTC 1 cut(s) 406
EarI CTCTTC 1 cut(s) 384
EciI GGCGGA 2 cut(s) 126, 209
Ecl136II GAGCTC 1 cut(s) 543
Eco147I AGGCCT 1 cut(s) 171
Eco24I GRGCYC 1 cut(s) 545
Eco31I GGTCTC 1 cut(s) 524
Eco47I GGWCC 2 cut(s) 684, 1307
Eco47III AGCGCT 1 cut(s) 1351
Eco53kI GAGCTC 1 cut(s) 543
Eco57I CTGAAG 3 cut(s) 158, 513, 935
Eco72I CACGTG 1 cut(s) 734
Eco88I CYCGRG 1 cut(s) 538
Eco91I GGTNACC 1 cut(s) 125
EcoICRI GAGCTC 1 cut(s) 543
EcoO109I RGGNCCY 1 cut(s) 1307
EcoO65I GGTNACC 1 cut(s) 125
EcoRII CCWGG 4 cut(s) 33, 139, 556, 1309
EcoT22I ATGCAT 1 cut(s) 1496
EcoT38I GRGCYC 1 cut(s) 545
Esp3I CGTCTC 1 cut(s) 393
FaeI CATG 7 cut(s) 56, 627, 1074, 1097, 1256, 1271, 1498
FaqI GGGAC 2 cut(s) 992, 1408
FatI CATG 7 cut(s) 52, 623, 1070, 1093, 1252, 1267, 1494
FauI CCCGC 1 cut(s) 91
FauNDI CATATG 1 cut(s) 1502
FbaI TGATCA 2 cut(s) 885, 1207
Fnu4HI GCNGC 2 cut(s) 330, 1596
FokI GGATG 6 cut(s) 248, 334, 791, 1049, 1274, 1394
FriOI GRGCYC 1 cut(s) 545
Fsp4HI GCNGC 2 cut(s) 330, 1596
FspBI CTAG 7 cut(s) 131, 570, 590, 711, 818, 1343, 1391
GlaI GCGC 1 cut(s) 1351
GluI GCNGC 2 cut(s) 330, 1596
GsuI CTGGAG 2 cut(s) 146, 209
HaeII RGCGCY 1 cut(s) 1353
HaeIII GGCC 4 cut(s) 171, 901, 1140, 1472
HapII CCGG 3 cut(s) 1179, 1291, 1430
HhaI GCGC 1 cut(s) 1352
Hin1II CATG 7 cut(s) 56, 627, 1074, 1097, 1256, 1271, 1498
Hin6I GCGC 1 cut(s) 1350
HinP1I GCGC 1 cut(s) 1350
HincII GTYRAC 1 cut(s) 1156
HindII GTYRAC 1 cut(s) 1156
HinfI GANTC 9 cut(s) 56, 90, 341, 394, 457, 628, 665, 1297, 1361
HpaI GTTAAC 1 cut(s) 1156
HpaII CCGG 3 cut(s) 1179, 1291, 1430
HphI GGTGA 4 cut(s) 572, 944, 1160, 1472
Hpy166II GTNNAC 3 cut(s) 146, 1156, 1435
Hpy188I TCNGA 9 cut(s) 89, 412, 607, 890, 915, 945, 1176, 1204, 1637
Hpy188III TCNNGA 6 cut(s) 163, 182, 398, 461, 590, 1034
Hpy8I GTNNAC 3 cut(s) 146, 1156, 1435
HpyAV CCTTC 9 cut(s) 182, 307, 409, 475, 587, 923, 1255, 1507, 1511
HpyCH4III ACNGT 3 cut(s) 118, 258, 1008
HpyCH4IV ACGT 4 cut(s) 155, 548, 733, 812
HpyF10VI GCNNNNNNNGC 1 cut(s) 1604
HpyF3I CTNAG 4 cut(s) 199, 604, 944, 1135
HpySE526I ACGT 4 cut(s) 155, 548, 733, 812
Hsp92II CATG 7 cut(s) 56, 627, 1074, 1097, 1256, 1271, 1498
HspAI GCGC 1 cut(s) 1350
Ksp22I TGATCA 2 cut(s) 885, 1207
KspAI GTTAAC 1 cut(s) 1156
Kzo9I GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
LmnI GCTCC 4 cut(s) 424, 487, 520, 1030
Lsp1109I GCAGC 2 cut(s) 316, 1582
LweI GCATC 3 cut(s) 211, 268, 659
MabI ACCWGGT 1 cut(s) 33
MaeI CTAG 7 cut(s) 131, 570, 590, 711, 818, 1343, 1391
MaeII ACGT 4 cut(s) 155, 548, 733, 812
MaeIII GTNAC 5 cut(s) 44, 125, 151, 781, 813
MalI GATC 9 cut(s) 5, 104, 465, 709, 887, 1173, 1209, 1428, 1480
MboI GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
MboII GAAGA 5 cut(s) 31, 398, 401, 506, 932
MfeI CAATTG 2 cut(s) 287, 969
MflI RGATCY 4 cut(s) 707, 1171, 1426, 1478
MhlI GDGCHC 4 cut(s) 116, 148, 545, 1422
MlsI TGGCCA 1 cut(s) 1472
MluNI TGGCCA 1 cut(s) 1472
MlyI GAGTC 3 cut(s) 350, 637, 1306
MmeI TCCRAC 7 cut(s) 240, 390, 498, 1052, 1087, 1199, 1550
Mox20I TGGCCA 1 cut(s) 1472
Mph1103I ATGCAT 1 cut(s) 1496
MroXI GAANNNNTTC 1 cut(s) 393
MscI TGGCCA 1 cut(s) 1472
MseI TTAA 6 cut(s) 740, 872, 1125, 1155, 1164, 1272
MslI CAYNNNNRTG 1 cut(s) 1146
Msp20I TGGCCA 1 cut(s) 1472
MspI CCGG 3 cut(s) 1179, 1291, 1430
MspR9I CCNGG 4 cut(s) 35, 141, 558, 1311
MunI CAATTG 2 cut(s) 287, 969
Mva1269I GAATGC 3 cut(s) 331, 714, 1445
MvaI CCWGG 4 cut(s) 35, 141, 558, 1311
MwoI GCNNNNNNNGC 1 cut(s) 1604
NdeI CATATG 1 cut(s) 1502
NdeII GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
NheI GCTAGC 1 cut(s) 1342
NlaIII CATG 7 cut(s) 56, 627, 1074, 1097, 1256, 1271, 1498
NlaIV GGNNCC 5 cut(s) 489, 522, 829, 1173, 1428
NmuCI GTSAC 1 cut(s) 781
NsiI ATGCAT 1 cut(s) 1496
NspI RCATGY 4 cut(s) 1074, 1097, 1271, 1498
PaeI GCATGC 1 cut(s) 1498
PceI AGGCCT 1 cut(s) 171
PciI ACATGT 2 cut(s) 1093, 1267
PctI GAATGC 3 cut(s) 331, 714, 1445
PdmI GAANNNNTTC 1 cut(s) 393
PfeI GAWTC 6 cut(s) 56, 90, 394, 457, 665, 1361
PflMI CCANNNNNTGG 1 cut(s) 1293
PkrI GCNGC 2 cut(s) 331, 1597
PleI GAGTC 3 cut(s) 349, 636, 1305
PmaCI CACGTG 1 cut(s) 734
PmlI CACGTG 1 cut(s) 734
PpsI GAGTC 3 cut(s) 349, 636, 1305
Ppu21I YACGTR 1 cut(s) 734
PpuMI RGGWCCY 1 cut(s) 1307
PscI ACATGT 2 cut(s) 1093, 1267
Psp124BI GAGCTC 1 cut(s) 545
Psp1406I AACGTT 2 cut(s) 548, 812
Psp5II RGGWCCY 1 cut(s) 1307
Psp6I CCWGG 4 cut(s) 33, 139, 556, 1309
PspCI CACGTG 1 cut(s) 734
PspEI GGTNACC 1 cut(s) 125
PspGI CCWGG 4 cut(s) 33, 139, 556, 1309
PspN4I GGNNCC 5 cut(s) 489, 522, 829, 1173, 1428
PspPI GGNCC 3 cut(s) 684, 899, 1307
PspPPI RGGWCCY 1 cut(s) 1307
PstNI CAGNNNCTG 1 cut(s) 1310
PsuI RGATCY 4 cut(s) 707, 1171, 1426, 1478
RsaI GTAC 2 cut(s) 1087, 1466
RsaNI GTAC 2 cut(s) 1086, 1465
RseI CAYNNNNRTG 1 cut(s) 1146
SacI GAGCTC 1 cut(s) 545
SaqAI TTAA 6 cut(s) 740, 872, 1125, 1155, 1164, 1272
SatI GCNGC 2 cut(s) 330, 1596
Sau3AI GATC 9 cut(s) 3, 102, 463, 707, 885, 1171, 1207, 1426, 1478
Sau96I GGNCC 3 cut(s) 684, 899, 1307
ScaI AGTACT 1 cut(s) 1466
SchI GAGTC 3 cut(s) 350, 637, 1306
ScrFI CCNGG 4 cut(s) 35, 141, 558, 1311
SduI GDGCHC 4 cut(s) 116, 148, 545, 1422
SexAI ACCWGGT 1 cut(s) 33
SfaNI GCATC 3 cut(s) 211, 268, 659
SfcI CTRYAG 2 cut(s) 1302, 1405
SinI GGWCC 2 cut(s) 684, 1307
SmiMI CAYNNNNRTG 1 cut(s) 1146
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SphI GCATGC 1 cut(s) 1498
SseBI AGGCCT 1 cut(s) 171
SsiI CCGC 4 cut(s) 98, 137, 194, 224
SspI AATATT 2 cut(s) 1247, 1557
SspMI CTAG 7 cut(s) 131, 570, 590, 711, 818, 1343, 1391
SstI GAGCTC 1 cut(s) 545
StuI AGGCCT 1 cut(s) 171
StyD4I CCNGG 4 cut(s) 33, 139, 556, 1309
TaaI ACNGT 3 cut(s) 118, 258, 1008
TaiI ACGT 4 cut(s) 158, 551, 736, 815
TaqI TCGA 5 cut(s) 93, 397, 455, 466, 676
TatI WGTACW 1 cut(s) 1464
TfiI GAWTC 6 cut(s) 56, 90, 394, 457, 665, 1361
Tru1I TTAA 6 cut(s) 740, 872, 1125, 1155, 1164, 1272
Tru9I TTAA 6 cut(s) 740, 872, 1125, 1155, 1164, 1272
TscAI CASTG 3 cut(s) 700, 1480, 1546
TseFI GTSAC 1 cut(s) 781
TseI GCWGC 2 cut(s) 329, 1595
Tsp45I GTSAC 1 cut(s) 781
TspDTI ATGAA 5 cut(s) 69, 338, 738, 1007, 1247
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 3 cut(s) 700, 1480, 1546
Van91I CCANNNNNTGG 1 cut(s) 1293
VneI GTGCAC 1 cut(s) 144
VpaK11BI GGWCC 2 cut(s) 684, 1307
XapI RAATTY 3 cut(s) 564, 678, 1013
XbaI TCTAGA 1 cut(s) 589
XceI RCATGY 4 cut(s) 1074, 1097, 1271, 1498
XcmI CCANNNNNNNNNTGG 1 cut(s) 1480
XmnI GAANNNNTTC 1 cut(s) 393
XspI CTAG 7 cut(s) 131, 570, 590, 711, 818, 1343, 1391
ZrmI AGTACT 1 cut(s) 1466
Zsp2I ATGCAT 1 cut(s) 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.