Prupe.1G491100_v2.0.a1

Amino acid permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001778
Physical Location & Seq
Reverse (-)
40850365 .. 40852855
2491 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G491100.1

Sequence Viewer

Length: 1452 bp
ATGGGTGATCACACTGCCACAGGGAACCTGCAGCTTCACCACAACCCAGTTTTTGATGTCTCACTCAATGTGCAAGAAGGCTCCAACTACATTGATGATGATGGCCGCCCAAAACGAACTGGAACCGTTTGGACTTCAAGTGCTCACATAATTACTGCTGTGATAGGATCTGGGGTTCTGTCCTTGGCTTGGGCCATGGCTCAGCTTGGATGGATTGCTGGTCCTATTGTGATGGTCTTGTTCTCCTTTATCACCTACTACACTTCAACTCTTCTTGCTGCCTGCTACCGTGATCCGGTCACTGGAAAGCGAAATTACACTTATTCAGATGCTGTTCGATCCAACCTTGGTGCACTTCAGGTCAAATTCTGTGGATCTGTTCAGAACGTGGCCCTTTTTGGAATTTCTATTGGCTTCAATATAGCAGCAGCTATAAGCATGGTGGCAATACAGAGGTGTAATTGCAACCACAAGAGTGGTGGAAAAAACCCATGTCATATAAACATCAATCCCTACATGATAGCTTTTGGTATCTCAGAAATTTTGTTGTCTCAAATTCCTAACTTTGATAAGTTGTCATGGCTCTCCATTGTTGCTGCAGTCATGTCCTTCACTTACTCAGGAATTGGATTAGCCCTTGGAATTGCTAAAGTTGCTGAAAATGGAAAAATCAAGGGAAATATCACTGGAATTACCGTTGGCACTGTGACTCCAATTCAAAAGATGTGGAGGACCTTCCAAGCACTTGGTAACATAGCTTTTGCCTACTCTTACTCTATCATCCTCATTGAAATTCAGGACACAATTAAATCTCCACCGTCTGAGTACAAAACAATGAAGAAGGCCACTCTACTTAGTTTGACACTGACATCCATTTTCTACATTCTGTGTGGCTGCATGGGCTATGCTGCTTTCGGAGACTTGTCCCCTGGAAACCTCCTCAGTGACAAAGGTTTCCACAACCCATATTGGCTCATTAACATAGCCAATGCTGCCATAGTGATCCACGTTGTTGGTGCATACCAAGTGTTTGTGCAACCCATTTTCGCGCTCGTTGAGAAAACAGCGGCAAAAGTTTTCCCAGATAGCCAATTCATCACAAAAGACATCAAAATCCCAATCCCCGGTTTTGGTGTCTACAACCTTAACCTCTTCAGATTGGTGTGGAGGACATTTTATGTGATCATAACCACTTTGATTTCCATGATCCTCCCATTCTTTAATGATGTGGTTGGATTTCTTGGAGCTTTGGTATATTGGCCACTCACAGTTTACTTCCCTGTGGAGATGTACATTGCTCAAAAGAAGGTACCAAAGTGGAGCACAAAATGGATTTTCCTCCAAATCATAAGTCTTTCTGTCCTTGTAATAGCTCTAGCTGCTGCAGCTGGCTCAGTTACTGGTGTGGTTCAAAACCTCAAGAACTACAAGCCCTTCAAGACCAGCAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

484

Amino Acids

52.82

Weight (kDa)

9.33

Isoelectric Point (pI)

32.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 36
Acc65I GGTACC 1 cut(s) 1309
AccB1I GGYRCC 1 cut(s) 1309
AccI GTMKAC 1 cut(s) 1137
AccII CGCG 1 cut(s) 1049
AciI CCGC 2 cut(s) 106, 1067
AclWI GGATC 6 cut(s) 175, 287, 333, 382, 997, 1201
AcoI YGGCCR 2 cut(s) 103, 1259
AcsI RAATTY 5 cut(s) 365, 402, 540, 555, 792
AcuI CTGAAG 2 cut(s) 341, 1138
AfaI GTAC 3 cut(s) 827, 1292, 1311
AfiI CCNNNNNNNGG 5 cut(s) 189, 295, 302, 1124, 1130
AgsI TTSAA 7 cut(s) 138, 267, 418, 719, 791, 1412, 1438
AjnI CCWGG 1 cut(s) 928
AleI CACNNNNGTG 1 cut(s) 474
AloI GAACNNNNNNTCC 2 cut(s) 159, 191
AluBI AGCT 9 cut(s) 34, 205, 431, 524, 758, 1247, 1373, 1379, 1388
AluI AGCT 9 cut(s) 34, 205, 431, 524, 758, 1247, 1373, 1379, 1388
Alw21I GWGCWC 3 cut(s) 145, 355, 1325
Alw26I GTCTC 3 cut(s) 64, 555, 912
Alw44I GTGCAC 1 cut(s) 351
AlwI GGATC 6 cut(s) 175, 287, 333, 382, 997, 1201
AlwNI CAGNNNCTG 2 cut(s) 332, 1400
AoxI GGCC 5 cut(s) 103, 192, 390, 843, 1259
ApaLI GTGCAC 1 cut(s) 351
ApoI RAATTY 5 cut(s) 365, 402, 540, 555, 792
ArsI GACNNNNNNTTYG 2 cut(s) 1336, 1368
Asp718I GGTACC 1 cut(s) 1309
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 4 cut(s) 192, 221, 391, 732
AsuC2I CCSGG 1 cut(s) 1125
AsuHPI GGTGA 3 cut(s) 17, 29, 244
AvaII GGWCC 2 cut(s) 221, 732
BaeGI GKGCMC 1 cut(s) 355
BaeI ACNNNNGTAYC 2 cut(s) 1301, 1334
BalI TGGCCA 1 cut(s) 1261
BanI GGYRCC 1 cut(s) 1309
Bbv12I GWGCWC 3 cut(s) 145, 355, 1325
BccI CCATC 3 cut(s) 95, 204, 226
BciT130I CCWGG 1 cut(s) 930
BclI TGATCA 2 cut(s) 7, 1182
BcnI CCSGG 1 cut(s) 1125
BcoDI GTCTC 3 cut(s) 64, 555, 912
BfaI CTAG 1 cut(s) 1376
BfmI CTRYAG 3 cut(s) 29, 597, 1383
BfuAI ACCTGC 1 cut(s) 36
BlpI GCTNAGC 1 cut(s) 201
Bme1390I CCNGG 2 cut(s) 930, 1125
Bme18I GGWCC 2 cut(s) 221, 732
BmgT120I GGNCC 4 cut(s) 192, 221, 391, 732
BmiI GGNNCC 4 cut(s) 26, 82, 124, 1311
BmrFI CCNGG 2 cut(s) 930, 1125
BmrI ACTGGG 1 cut(s) 41
BmsI GCATC 1 cut(s) 319
BmuI ACTGGG 1 cut(s) 41
Bpu1102I GCTNAGC 1 cut(s) 201
BpuEI CTTGAG 1 cut(s) 1403
BpuMI CCSGG 1 cut(s) 1125
BsaJI CCNNGG 6 cut(s) 183, 195, 346, 637, 928, 1123
BsaWI WCCGGW 1 cut(s) 295
BsaXI ACNNNNNCTCC 4 cut(s) 694, 724, 1236, 1266
Bsc4I CCNNNNNNNGG 5 cut(s) 189, 295, 302, 1124, 1130
Bse1I ACTGG 5 cut(s) 47, 124, 307, 691, 1405
Bse3DI GCAATG 1 cut(s) 1293
BseBI CCWGG 1 cut(s) 930
BseDI CCNNGG 6 cut(s) 183, 195, 346, 637, 928, 1123
BseGI GGATG 3 cut(s) 215, 780, 869
BseLI CCNNNNNNNGG 5 cut(s) 189, 295, 302, 1124, 1130
BseMI GCAATG 1 cut(s) 1293
BseMII CTCAG 6 cut(s) 215, 549, 633, 813, 955, 1407
BseNI ACTGG 5 cut(s) 47, 124, 307, 691, 1405
BseRI GAGGAG 1 cut(s) 929
BseSI GKGCMC 1 cut(s) 355
Bsh1236I CGCG 1 cut(s) 1049
BshFI GGCC 5 cut(s) 105, 194, 392, 845, 1261
BshNI GGYRCC 1 cut(s) 1309
BsiHKAI GWGCWC 3 cut(s) 145, 355, 1325
BsiSI CCGG 2 cut(s) 296, 1125
BslFI GGGAC 1 cut(s) 910
BslI CCNNNNNNNGG 5 cut(s) 189, 295, 302, 1124, 1130
BsmAI GTCTC 3 cut(s) 64, 555, 912
BsmFI GGGAC 1 cut(s) 910
BsnI GGCC 5 cut(s) 105, 194, 392, 845, 1261
Bsp1286I GDGCHC 3 cut(s) 145, 355, 1325
Bsp1407I TGTACA 1 cut(s) 1290
Bsp143I GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
Bsp1720I GCTNAGC 1 cut(s) 201
Bsp19I CCATGG 1 cut(s) 195
BspACI CCGC 2 cut(s) 106, 1067
BspANI GGCC 5 cut(s) 105, 194, 392, 845, 1261
BspCNI CTCAG 6 cut(s) 214, 548, 632, 814, 954, 1406
BspFNI CGCG 1 cut(s) 1049
BspLI GGNNCC 4 cut(s) 26, 82, 124, 1311
BspMAI CTGCAG 3 cut(s) 33, 601, 1387
BspMI ACCTGC 1 cut(s) 36
BspPI GGATC 6 cut(s) 175, 287, 333, 382, 997, 1201
BspT107I GGYRCC 1 cut(s) 1309
BsrDI GCAATG 1 cut(s) 1293
BsrGI TGTACA 1 cut(s) 1290
BsrI ACTGG 5 cut(s) 47, 124, 307, 691, 1405
BssECI CCNNGG 6 cut(s) 183, 195, 346, 637, 928, 1123
BssMI GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
BssT1I CCWWGG 4 cut(s) 183, 195, 346, 637
Bst2UI CCWGG 1 cut(s) 930
Bst4CI ACNGT 6 cut(s) 127, 290, 697, 706, 819, 1270
Bst6I CTCTTC 2 cut(s) 276, 1157
BstAUI TGTACA 1 cut(s) 1290
BstC8I GCNNGC 2 cut(s) 283, 1390
BstDEI CTNAG 7 cut(s) 201, 535, 619, 822, 854, 941, 1393
BstDSI CCRYGG 1 cut(s) 195
BstF5I GGATG 3 cut(s) 215, 780, 869
BstFNI CGCG 1 cut(s) 1049
BstHHI GCGC 1 cut(s) 1051
BstKTI GATC 8 cut(s) 10, 170, 295, 341, 377, 1005, 1185, 1209
BstMAI GTCTC 3 cut(s) 64, 555, 912
BstMBI GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
BstMWI GCNNNNNNNGC 5 cut(s) 653, 900, 992, 1379, 1385
BstNI CCWGG 1 cut(s) 930
BstSCI CCNGG 2 cut(s) 928, 1123
BstSFI CTRYAG 3 cut(s) 29, 597, 1383
BstSLI GKGCMC 1 cut(s) 355
BstUI CGCG 1 cut(s) 1049
BstX2I RGATCY 2 cut(s) 167, 374
BstXI CCANNNNNNTGG 3 cut(s) 476, 746, 1013
BstYI RGATCY 2 cut(s) 167, 374
BsuRI GGCC 5 cut(s) 105, 194, 392, 845, 1261
BtgI CCRYGG 1 cut(s) 195
BtsCI GGATG 3 cut(s) 215, 780, 869
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 6 cut(s) 12, 300, 684, 702, 863, 949
BveI ACCTGC 1 cut(s) 36
Cac8I GCNNGC 2 cut(s) 283, 1390
CaiI CAGNNNCTG 2 cut(s) 332, 1400
CfoI GCGC 1 cut(s) 1051
Cfr13I GGNCC 4 cut(s) 192, 221, 391, 732
Csp6I GTAC 3 cut(s) 826, 1291, 1310
CspCI CAANNNNNGTGG 6 cut(s) 352, 387, 460, 495, 707, 742
CviAII CATG 8 cut(s) 196, 439, 492, 517, 579, 604, 898, 1204
CviQI GTAC 3 cut(s) 826, 1291, 1310
DdeI CTNAG 7 cut(s) 201, 535, 619, 822, 854, 941, 1393
DpnI GATC 8 cut(s) 9, 169, 294, 340, 376, 1004, 1184, 1208
DpnII GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
EaeI YGGCCR 2 cut(s) 103, 1259
Eam1104I CTCTTC 2 cut(s) 276, 1157
EarI CTCTTC 2 cut(s) 276, 1157
Eco130I CCWWGG 4 cut(s) 183, 195, 346, 637
Eco47I GGWCC 2 cut(s) 221, 732
Eco57I CTGAAG 2 cut(s) 341, 1138
EcoO109I RGGNCCY 1 cut(s) 732
EcoRII CCWGG 1 cut(s) 928
EcoT14I CCWWGG 4 cut(s) 183, 195, 346, 637
ErhI CCWWGG 4 cut(s) 183, 195, 346, 637
FaeI CATG 8 cut(s) 199, 442, 495, 520, 582, 607, 901, 1207
FaqI GGGAC 1 cut(s) 910
FatI CATG 8 cut(s) 195, 438, 491, 516, 578, 603, 897, 1203
FbaI TGATCA 2 cut(s) 7, 1182
FblI GTMKAC 1 cut(s) 1137
FokI GGATG 3 cut(s) 222, 767, 856
FspBI CTAG 1 cut(s) 1376
GlaI GCGC 1 cut(s) 1050
HaeIII GGCC 5 cut(s) 105, 194, 392, 845, 1261
HapII CCGG 2 cut(s) 296, 1125
HhaI GCGC 1 cut(s) 1051
Hin1II CATG 8 cut(s) 199, 442, 495, 520, 582, 607, 901, 1207
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HinfI GANTC 1 cut(s) 709
HpaII CCGG 2 cut(s) 296, 1125
HphI GGTGA 3 cut(s) 17, 29, 244
Hpy166II GTNNAC 3 cut(s) 353, 1138, 1273
Hpy188I TCNGA 6 cut(s) 328, 384, 538, 823, 917, 1157
Hpy188III TCNNGA 4 cut(s) 621, 797, 1420, 1438
Hpy8I GTNNAC 3 cut(s) 353, 1138, 1273
HpyAV CCTTC 6 cut(s) 71, 619, 745, 835, 1300, 1444
HpyCH4III ACNGT 6 cut(s) 127, 290, 697, 706, 819, 1270
HpyCH4IV ACGT 2 cut(s) 387, 1008
HpyCH4V TGCA 9 cut(s) 31, 73, 353, 465, 599, 897, 1019, 1036, 1385
HpyF10VI GCNNNNNNNGC 5 cut(s) 653, 900, 992, 1379, 1385
HpyF3I CTNAG 7 cut(s) 201, 535, 619, 822, 854, 941, 1393
HpySE526I ACGT 2 cut(s) 387, 1008
Hsp92II CATG 8 cut(s) 199, 442, 495, 520, 582, 607, 901, 1207
HspAI GCGC 1 cut(s) 1049
KpnI GGTACC 1 cut(s) 1313
Ksp22I TGATCA 2 cut(s) 7, 1182
Kzo9I GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
LmnI GCTCC 3 cut(s) 86, 1244, 1320
LweI GCATC 1 cut(s) 319
MaeI CTAG 1 cut(s) 1376
MaeII ACGT 2 cut(s) 387, 1008
MaeIII GTNAC 5 cut(s) 298, 706, 749, 944, 1396
MalI GATC 8 cut(s) 9, 169, 294, 340, 376, 1004, 1184, 1208
MboI GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
MboII GAAGA 3 cut(s) 263, 850, 1144
MflI RGATCY 2 cut(s) 167, 374
MhlI GDGCHC 3 cut(s) 145, 355, 1325
MlsI TGGCCA 1 cut(s) 1261
MluNI TGGCCA 1 cut(s) 1261
MlyI GAGTC 1 cut(s) 703
MmeI TCCRAC 3 cut(s) 108, 366, 1213
Mox20I TGGCCA 1 cut(s) 1261
MscI TGGCCA 1 cut(s) 1261
MseI TTAA 4 cut(s) 807, 978, 1146, 1221
MslI CAYNNNNRTG 1 cut(s) 474
Msp20I TGGCCA 1 cut(s) 1261
MspA1I CMGCKG 2 cut(s) 1067, 1388
MspI CCGG 2 cut(s) 296, 1125
MspR9I CCNGG 2 cut(s) 930, 1125
MvaI CCWGG 1 cut(s) 930
MvnI CGCG 1 cut(s) 1049
MwoI GCNNNNNNNGC 5 cut(s) 653, 900, 992, 1379, 1385
NciI CCSGG 1 cut(s) 1125
NcoI CCATGG 1 cut(s) 195
NdeII GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
NlaIII CATG 8 cut(s) 199, 442, 495, 520, 582, 607, 901, 1207
NlaIV GGNNCC 4 cut(s) 26, 82, 124, 1311
NmuCI GTSAC 3 cut(s) 298, 706, 944
OliI CACNNNNGTG 1 cut(s) 474
PleI GAGTC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 703
PpuMI RGGWCCY 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 1 cut(s) 928
PspGI CCWGG 1 cut(s) 928
PspN4I GGNNCC 4 cut(s) 26, 82, 124, 1311
PspPI GGNCC 4 cut(s) 192, 221, 391, 732
PspPPI RGGWCCY 1 cut(s) 732
PstI CTGCAG 3 cut(s) 33, 601, 1387
PstNI CAGNNNCTG 2 cut(s) 332, 1400
PsuI RGATCY 2 cut(s) 167, 374
PvuII CAGCTG 1 cut(s) 1388
RsaI GTAC 3 cut(s) 827, 1292, 1311
RsaNI GTAC 3 cut(s) 826, 1291, 1310
RseI CAYNNNNRTG 1 cut(s) 474
SaqAI TTAA 4 cut(s) 807, 978, 1146, 1221
Sau3AI GATC 8 cut(s) 7, 167, 292, 338, 374, 1002, 1182, 1206
Sau96I GGNCC 4 cut(s) 192, 221, 391, 732
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 2 cut(s) 930, 1125
SduI GDGCHC 3 cut(s) 145, 355, 1325
SfaNI GCATC 1 cut(s) 319
SfcI CTRYAG 3 cut(s) 29, 597, 1383
SinI GGWCC 2 cut(s) 221, 732
SmiMI CAYNNNNRTG 1 cut(s) 474
SmlI CTYRAG 1 cut(s) 1418
SmoI CTYRAG 1 cut(s) 1418
SsiI CCGC 2 cut(s) 106, 1067
SspMI CTAG 1 cut(s) 1376
StyD4I CCNGG 2 cut(s) 928, 1123
StyI CCWWGG 4 cut(s) 183, 195, 346, 637
TaaI ACNGT 6 cut(s) 127, 290, 697, 706, 819, 1270
TaiI ACGT 2 cut(s) 390, 1011
TaqI TCGA 1 cut(s) 337
TatI WGTACW 2 cut(s) 825, 1290
TauI GCSGC 2 cut(s) 108, 1070
Tru1I TTAA 4 cut(s) 807, 978, 1146, 1221
Tru9I TTAA 4 cut(s) 807, 978, 1146, 1221
TscAI CASTG 6 cut(s) 19, 307, 691, 709, 870, 949
TseFI GTSAC 3 cut(s) 298, 706, 944
Tsp45I GTSAC 3 cut(s) 298, 706, 944
TspDTI ATGAA 2 cut(s) 851, 1084
TspRI CASTG 6 cut(s) 19, 307, 691, 709, 870, 949
VneI GTGCAC 1 cut(s) 351
VpaK11BI GGWCC 2 cut(s) 221, 732
XapI RAATTY 5 cut(s) 365, 402, 540, 555, 792
XcmI CCANNNNNNNNNTGG 1 cut(s) 476
XmiI GTMKAC 1 cut(s) 1137
XspI CTAG 1 cut(s) 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.