pycom15g30720

Amino acid permease

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
28631255 .. 28633222
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g30720.4

Sequence Viewer

Length: 1458 bp
ATGAGTAAGATGGGTGATAACCAGATTAACCCCCGTCAAGGTTTTGAACTCTCAGTCCCTATGCCTCCAGAAGTAGACTCCAAGTGCTATGACGACGACGGCCGTCTCAAAAGAACTGGAACTGTATGGACTGCAAGTGCTCATATTATTACTGCGGTAATTGGGTCTGGAGTTTTGTCCTTGGCTTGGGCAGTAGCTCAGCTAGGATGGGTTGCTGGTCCTGCTGTGATGCTCTTATTCTCCTTTGTCACTTACTACACTTCAACTCTTCTCTCTGCCTGCTATCGTTCCGGCGATCCTGTCACTGGAAAAAGAAACTATACTTACACCAATGCCGTCCGATCCAACCTTGGTGGGTTCAAGGTGAAAATTTGTGGGTTTGTTCAGTACTTGAATCTTTTTGGAGTTGCCATTGGATACACTATAGCATCATCCATAAGCATGGTGGCAATTAAGAGGTCTAATTGTTTCTACAAGAATGGTGACACAGCACCATGCCATGTAAACAGCAATCCTTACATGATCGCTTTTGGGGTAGCAGAAATCATATTCTCTCAAATTCCAGAGATCGATCAGCTGTGGTGGCTCTCCATTGTTGCTGCAGTCATGTCCTTCACTTATTCCTCCATCGGACTTGGCCTCGGAATCGCCAAAGTCGTAGAAACTGGAACTATCAAAGGAAGTATGACTGGAATAGACATTGGAGCAGTAACTGAAACACAAAAAATATGGAGGAGCTTCCAAGCACTTGGGGACATAGCTTTTGCCTACTCGTATTCTCTCATCCTCATTGAAATTCAGGACACGGTAAAATCCCCGCCATCCGAAGCCAAGACAATGAAGAAGGCAACTCTAGTCAGTGTGGCTACCACAACCCTTTTCTACATGTTGTGTGGTTGCATGGGCTACGCCGCTTTTGGAGACTCATCCCCTGGAAACCTCCTCACTGGTTTTGGCTTCTTCAACCCCTACTGGCTCATCGACATAGCGAACGCCGCCATTGTCATCCACCTTGTTGGTGCTTACCAAGTGTTTGTCCAACCCCTCTATGCATTTGTTGAGAAAACAGTAAAAGAAAAGTACCCGCACTGCCAGTTCATCACCAAAGACATCAAACTCCGACTCCCAGTTTTCGGTTCTTACAATCTCAACCTCTTCAGACTGGTTTGGAGGACATCTTTTGTGATTGTCACCACTGTATCGATCTCCATGATCCTGCCATTTTTCAATGATGTTGTTGCACTTCTAGGGGCTCTAGGATTTTGGCCGCTCACAGTATACTTCCCTGTGGAGATGTATATTGCTCAGAAGAGGATACCAAAGTGGAGCACAAGATGGCTTTGCCTCCAAACCTTGAGTGGTGCTTGCCTTATAATCACCATAGCAGCTGCTGCTGGATCGATTGCTGGTGTGATTAGTGATCTCAAGATCTACAAGCCTTTCAAGACCAGCTACTGA

Protein Analysis

486

Amino Acids

53.2

Weight (kDa)

9.04

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1373
AccBSI CCGCTC 1 cut(s) 1270
AccI GTMKAC 2 cut(s) 75, 1278
AciI CCGC 6 cut(s) 155, 818, 912, 996, 1085, 1268
AclWI GGATC 4 cut(s) 290, 336, 1207, 1405
AcoI YGGCCR 2 cut(s) 100, 1265
AcsI RAATTY 3 cut(s) 369, 558, 795
AcuI CTGAAG 1 cut(s) 1141
AfaI GTAC 2 cut(s) 389, 1082
AfiI CCNNNNNNNGG 4 cut(s) 38, 186, 305, 1133
AflIII ACRYGT 1 cut(s) 885
AgsI TTSAA 8 cut(s) 47, 264, 361, 394, 794, 964, 1228, 1444
AjnI CCWGG 1 cut(s) 931
AloI GAACNNNNNNTCC 2 cut(s) 39, 71
AluBI AGCT 7 cut(s) 197, 202, 577, 738, 761, 1388, 1452
AluI AGCT 7 cut(s) 197, 202, 577, 738, 761, 1388, 1452
Alw21I GWGCWC 2 cut(s) 142, 1331
Alw26I GTCTC 2 cut(s) 110, 915
AlwI GGATC 4 cut(s) 290, 336, 1207, 1405
AlwNI CAGNNNCTG 3 cut(s) 713, 1391, 1455
AoxI GGCC 3 cut(s) 100, 637, 1265
ApeKI GCWGC 4 cut(s) 599, 1385, 1388, 1391
ApoI RAATTY 3 cut(s) 369, 558, 795
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
AspS9I GGNCC 1 cut(s) 218
AsuHPI GGTGA 6 cut(s) 26, 376, 494, 1093, 1183, 1369
AvaII GGWCC 1 cut(s) 218
BaeI ACNNNNGTAYC 4 cut(s) 1182, 1215, 1307, 1340
BanII GRGCYC 1 cut(s) 1255
Bbv12I GWGCWC 2 cut(s) 142, 1331
BbvI GCAGC 4 cut(s) 586, 1375, 1378, 1397
BccI CCATC 5 cut(s) 4, 201, 635, 829, 1329
BceAI ACGGC 3 cut(s) 87, 115, 320
BciT130I CCWGG 1 cut(s) 933
BciVI GTATCC 2 cut(s) 410, 1308
BcoDI GTCTC 2 cut(s) 110, 915
BfaI CTAG 4 cut(s) 203, 854, 1247, 1256
BfmI CTRYAG 2 cut(s) 423, 600
BfuI GTATCC 2 cut(s) 410, 1308
BglII AGATCT 1 cut(s) 1428
BisI GCNGC 7 cut(s) 600, 912, 996, 1268, 1386, 1389, 1392
BlpI GCTNAGC 1 cut(s) 198
BlsI GCNGC 7 cut(s) 601, 913, 997, 1269, 1387, 1390, 1393
BmcAI AGTACT 1 cut(s) 389
Bme1390I CCNGG 1 cut(s) 933
Bme18I GGWCC 1 cut(s) 218
BmgT120I GGNCC 1 cut(s) 218
BmrFI CCNGG 1 cut(s) 933
BmrI ACTGGG 1 cut(s) 1121
BmsI GCATC 2 cut(s) 219, 437
BmuI ACTGGG 1 cut(s) 1121
BoxI GACNNNNGTC 1 cut(s) 102
BpmI CTGGAG 2 cut(s) 51, 189
Bpu1102I GCTNAGC 1 cut(s) 198
BpuEI CTTGAG 2 cut(s) 1375, 1409
Bsa29I ATCGAT 3 cut(s) 570, 1202, 1400
BsaJI CCNNGG 4 cut(s) 180, 349, 640, 931
BsaXI ACNNNNNCTCC 2 cut(s) 1107, 1137
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 186, 305, 1133
Bse1I ACTGG 9 cut(s) 121, 310, 670, 694, 952, 977, 1093, 1127, 1167
BseBI CCWGG 1 cut(s) 933
BseCI ATCGAT 3 cut(s) 570, 1202, 1400
BseDI CCNNGG 4 cut(s) 180, 349, 640, 931
BseGI GGATG 6 cut(s) 212, 431, 783, 821, 926, 1005
BseLI CCNNNNNNNGG 4 cut(s) 38, 186, 305, 1133
BseMII CTCAG 3 cut(s) 66, 212, 1319
BseNI ACTGG 9 cut(s) 121, 310, 670, 694, 952, 977, 1093, 1127, 1167
BseRI GAGGAG 2 cut(s) 748, 932
BseX3I CGGCCG 1 cut(s) 100
BseXI GCAGC 4 cut(s) 586, 1375, 1378, 1397
Bsh1285I CGRYCG 1 cut(s) 103
BshFI GGCC 3 cut(s) 102, 639, 1267
BshVI ATCGAT 3 cut(s) 570, 1202, 1400
BsiEI CGRYCG 1 cut(s) 103
BsiHKAI GWGCWC 2 cut(s) 142, 1331
BsiSI CCGG 1 cut(s) 291
BslFI GGGAC 2 cut(s) 41, 767
BslI CCNNNNNNNGG 4 cut(s) 38, 186, 305, 1133
BsmAI GTCTC 2 cut(s) 110, 915
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 41, 767
BsnI GGCC 3 cut(s) 102, 639, 1267
Bsp1286I GDGCHC 3 cut(s) 142, 1255, 1331
Bsp1720I GCTNAGC 1 cut(s) 198
BspACI CCGC 6 cut(s) 155, 818, 912, 996, 1085, 1268
BspANI GGCC 3 cut(s) 102, 639, 1267
BspCNI CTCAG 3 cut(s) 65, 211, 1318
BspDI ATCGAT 3 cut(s) 570, 1202, 1400
BspMAI CTGCAG 1 cut(s) 604
BspPI GGATC 4 cut(s) 290, 336, 1207, 1405
BsrBI CCGCTC 1 cut(s) 1270
BsrI ACTGG 9 cut(s) 121, 310, 670, 694, 952, 977, 1093, 1127, 1167
BssECI CCNNGG 4 cut(s) 180, 349, 640, 931
BssNAI GTATAC 1 cut(s) 1279
BssT1I CCWWGG 2 cut(s) 180, 349
Bst1107I GTATAC 1 cut(s) 1279
Bst2UI CCWGG 1 cut(s) 933
Bst4CI ACNGT 5 cut(s) 124, 808, 1069, 1198, 1276
Bst6I CTCTTC 3 cut(s) 273, 1160, 1304
BstAPI GCANNNNNTGC 1 cut(s) 1391
BstC8I GCNNGC 2 cut(s) 280, 1366
BstDEI CTNAG 3 cut(s) 52, 198, 1305
BstF5I GGATG 6 cut(s) 212, 431, 783, 821, 926, 1005
BstMAI GTCTC 2 cut(s) 110, 915
BstMCI CGRYCG 1 cut(s) 103
BstMWI GCNNNNNNNGC 4 cut(s) 221, 583, 995, 1391
BstNI CCWGG 1 cut(s) 933
BstNSI RCATGY 1 cut(s) 889
BstPAI GACNNNNGTC 1 cut(s) 102
BstSCI CCNGG 1 cut(s) 931
BstSFI CTRYAG 2 cut(s) 423, 600
BstV1I GCAGC 4 cut(s) 586, 1375, 1378, 1397
BstX2I RGATCY 1 cut(s) 1428
BstXI CCANNNNNNTGG 3 cut(s) 442, 749, 1016
BstYI RGATCY 1 cut(s) 1428
BstZ17I GTATAC 1 cut(s) 1279
BstZI CGGCCG 1 cut(s) 100
Bsu15I ATCGAT 3 cut(s) 570, 1202, 1400
BsuI GTATCC 2 cut(s) 410, 1308
BsuRI GGCC 3 cut(s) 102, 639, 1267
BsuTUI ATCGAT 3 cut(s) 570, 1202, 1400
BtsCI GGATG 6 cut(s) 212, 431, 783, 821, 926, 1005
BtsI GCAGTG 1 cut(s) 1087
BtsIMutI CAGTG 5 cut(s) 303, 865, 945, 1087, 1194
Cac8I GCNNGC 2 cut(s) 280, 1366
CaiI CAGNNNCTG 3 cut(s) 713, 1391, 1455
Cfr13I GGNCC 1 cut(s) 218
ClaI ATCGAT 3 cut(s) 570, 1202, 1400
Csp6I GTAC 2 cut(s) 388, 1081
CspCI CAANNNNNGTGG 2 cut(s) 334, 369
CviAII CATG 8 cut(s) 442, 495, 500, 520, 607, 886, 901, 1210
CviQI GTAC 2 cut(s) 388, 1081
DdeI CTNAG 3 cut(s) 52, 198, 1305
EaeI YGGCCR 2 cut(s) 100, 1265
EagI CGGCCG 1 cut(s) 100
Eam1104I CTCTTC 3 cut(s) 273, 1160, 1304
EarI CTCTTC 3 cut(s) 273, 1160, 1304
EclXI CGGCCG 1 cut(s) 100
Eco130I CCWWGG 2 cut(s) 180, 349
Eco24I GRGCYC 1 cut(s) 1255
Eco47I GGWCC 1 cut(s) 218
Eco52I CGGCCG 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 1141
EcoRII CCWGG 1 cut(s) 931
EcoT14I CCWWGG 2 cut(s) 180, 349
EcoT22I ATGCAT 1 cut(s) 1054
EcoT38I GRGCYC 1 cut(s) 1255
ErhI CCWWGG 2 cut(s) 180, 349
Esp3I CGTCTC 1 cut(s) 110
FaeI CATG 8 cut(s) 445, 498, 503, 523, 610, 889, 904, 1213
FaqI GGGAC 2 cut(s) 41, 767
FatI CATG 8 cut(s) 441, 494, 499, 519, 606, 885, 900, 1209
FauI CCCGC 2 cut(s) 825, 1092
FblI GTMKAC 2 cut(s) 75, 1278
Fnu4HI GCNGC 7 cut(s) 600, 912, 996, 1268, 1386, 1389, 1392
FokI GGATG 6 cut(s) 219, 418, 770, 808, 913, 992
FriOI GRGCYC 1 cut(s) 1255
Fsp4HI GCNGC 7 cut(s) 600, 912, 996, 1268, 1386, 1389, 1392
FspBI CTAG 4 cut(s) 203, 854, 1247, 1256
GluI GCNGC 7 cut(s) 600, 912, 996, 1268, 1386, 1389, 1392
GsuI CTGGAG 2 cut(s) 51, 189
HaeIII GGCC 3 cut(s) 102, 639, 1267
HapII CCGG 1 cut(s) 291
Hin1II CATG 8 cut(s) 445, 498, 503, 523, 610, 889, 904, 1213
HinfI GANTC 5 cut(s) 77, 394, 645, 923, 1122
HpaII CCGG 1 cut(s) 291
HphI GGTGA 6 cut(s) 26, 376, 494, 1093, 1183, 1369
Hpy166II GTNNAC 3 cut(s) 76, 505, 1279
Hpy188I TCNGA 7 cut(s) 341, 632, 644, 826, 1121, 1160, 1308
Hpy188III TCNNGA 6 cut(s) 68, 168, 563, 800, 1426, 1444
Hpy8I GTNNAC 3 cut(s) 76, 505, 1279
Hpy99I CGWCG 2 cut(s) 98, 101
HpyAV CCTTC 2 cut(s) 622, 838
HpyCH4III ACNGT 5 cut(s) 124, 808, 1069, 1198, 1276
HpyCH4V TGCA 5 cut(s) 134, 602, 900, 1052, 1241
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 583, 995, 1391
HpyF3I CTNAG 3 cut(s) 52, 198, 1305
Hsp92II CATG 8 cut(s) 445, 498, 503, 523, 610, 889, 904, 1213
LmnI GCTCC 3 cut(s) 704, 735, 1326
Lsp1109I GCAGC 4 cut(s) 586, 1375, 1378, 1397
LweI GCATC 2 cut(s) 219, 437
MaeI CTAG 4 cut(s) 203, 854, 1247, 1256
MaeIII GTNAC 5 cut(s) 247, 301, 482, 709, 1189
MbiI CCGCTC 1 cut(s) 1270
MboII GAAGA 5 cut(s) 260, 853, 952, 1147, 1321
MflI RGATCY 1 cut(s) 1428
MhlI GDGCHC 3 cut(s) 142, 1255, 1331
MluCI AATT 6 cut(s) 159, 369, 450, 463, 558, 795
MlyI GAGTC 3 cut(s) 71, 917, 1116
MmeI TCCRAC 3 cut(s) 369, 1063, 1144
Mph1103I ATGCAT 1 cut(s) 1054
MseI TTAA 2 cut(s) 27, 453
MslI CAYNNNNRTG 1 cut(s) 440
MspA1I CMGCKG 2 cut(s) 577, 1388
MspI CCGG 1 cut(s) 291
MspR9I CCNGG 1 cut(s) 933
MvaI CCWGG 1 cut(s) 933
MwoI GCNNNNNNNGC 4 cut(s) 221, 583, 995, 1391
NlaIII CATG 8 cut(s) 445, 498, 503, 523, 610, 889, 904, 1213
NmuCI GTSAC 4 cut(s) 247, 301, 482, 1189
NsiI ATGCAT 1 cut(s) 1054
NspI RCATGY 1 cut(s) 889
PciI ACATGT 1 cut(s) 885
PcsI WCGNNNNNNNCGW 1 cut(s) 654
PfeI GAWTC 2 cut(s) 394, 645
PkrI GCNGC 7 cut(s) 601, 913, 997, 1269, 1387, 1390, 1393
PleI GAGTC 3 cut(s) 71, 917, 1116
PpsI GAGTC 3 cut(s) 71, 917, 1116
PscI ACATGT 1 cut(s) 885
PshAI GACNNNNGTC 1 cut(s) 102
PsiI TTATAA 1 cut(s) 1373
Psp6I CCWGG 1 cut(s) 931
PspGI CCWGG 1 cut(s) 931
PspPI GGNCC 1 cut(s) 218
PstI CTGCAG 1 cut(s) 604
PstNI CAGNNNCTG 3 cut(s) 713, 1391, 1455
PsuI RGATCY 1 cut(s) 1428
PvuII CAGCTG 2 cut(s) 577, 1388
RsaI GTAC 2 cut(s) 389, 1082
RsaNI GTAC 2 cut(s) 388, 1081
RseI CAYNNNNRTG 1 cut(s) 440
SaqAI TTAA 2 cut(s) 27, 453
SatI GCNGC 7 cut(s) 600, 912, 996, 1268, 1386, 1389, 1392
Sau96I GGNCC 1 cut(s) 218
ScaI AGTACT 1 cut(s) 389
SchI GAGTC 3 cut(s) 71, 917, 1116
ScrFI CCNGG 1 cut(s) 933
SduI GDGCHC 3 cut(s) 142, 1255, 1331
SfaNI GCATC 2 cut(s) 219, 437
SfcI CTRYAG 2 cut(s) 423, 600
SinI GGWCC 1 cut(s) 218
SmiMI CAYNNNNRTG 1 cut(s) 440
SmlI CTYRAG 2 cut(s) 1354, 1424
SmoI CTYRAG 2 cut(s) 1354, 1424
Sse9I AATT 6 cut(s) 159, 369, 450, 463, 558, 795
SsiI CCGC 6 cut(s) 155, 818, 912, 996, 1085, 1268
SspMI CTAG 4 cut(s) 203, 854, 1247, 1256
StyD4I CCNGG 1 cut(s) 931
StyI CCWWGG 2 cut(s) 180, 349
TaaI ACNGT 5 cut(s) 124, 808, 1069, 1198, 1276
TaqI TCGA 4 cut(s) 570, 981, 1202, 1400
TasI AATT 6 cut(s) 159, 369, 450, 463, 558, 795
TatI WGTACW 1 cut(s) 387
TauI GCSGC 3 cut(s) 914, 998, 1270
TfiI GAWTC 2 cut(s) 394, 645
Tru1I TTAA 2 cut(s) 27, 453
Tru9I TTAA 2 cut(s) 27, 453
TscAI CASTG 5 cut(s) 310, 865, 952, 1094, 1201
TseFI GTSAC 4 cut(s) 247, 301, 482, 1189
TseI GCWGC 4 cut(s) 599, 1385, 1388, 1391
Tsp45I GTSAC 4 cut(s) 247, 301, 482, 1189
TspDTI ATGAA 2 cut(s) 854, 1087
TspRI CASTG 5 cut(s) 310, 865, 952, 1094, 1201
VpaK11BI GGWCC 1 cut(s) 218
XapI RAATTY 3 cut(s) 369, 558, 795
XceI RCATGY 1 cut(s) 889
XcmI CCANNNNNNNNNTGG 2 cut(s) 442, 1355
XmiI GTMKAC 2 cut(s) 75, 1278
XspI CTAG 4 cut(s) 203, 854, 1247, 1256
ZrmI AGTACT 1 cut(s) 389
Zsp2I ATGCAT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.