Prupe.2G043900_v2.0.a1

FAD binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
4874034 .. 4877758
3725 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G043900.1

Sequence Viewer

Length: 1200 bp
ATGGAGATTGGTGATACGAAAGAAAATATTGTAATCGTGGGTGGTGGGATATGCGGCCTTGCCACTGCCCTTGCTCTTCACAGAAAGGGCATTAGAAGCGTTGTCCTGGAAAGATCAAACACATTGCGAGCTACAGGGGCAGCTATCATCGTGCATCCAAACGGCTGGCGTGCACTTGATCAACTTGGTGTTGCCTCTCACCTTAGAGAAACTGCTATTCCTATACTCTCGGGACAATTTCACTCACTCAATAATGACGAGCTTAAAGAAATGCCTGTTGGGAAAGAAGAATTGAGATGTTTGAGAAGGACTGATCTCGTTGATATTTTGGCAAATAGTTTGCCACGTAACACTCTTCATTTGGGGTGTGAAGTGCTTTCTATTAAGTTGGATCCCATAACTTCTTCTCCTGTTCTTCAACTTCAAGGTGGAAGACTTTTGAACGCCAAGATTGTGATTGGATGCGACGGAGTGAACTCTGCCATATCAAATATGATGGGGGTGAAGGCTGAGAAAATTTTCACCATCAGTGTGATAAGAGGCTTCACGAGTTATCCAAATGGGCATGAACTCGGCTCTCAGTTCAGATTAACCAAAAAAAATGATACTCAGGTGGGACAGCTGCCAATGACCAAAAACCTAGTTTATTGGTTCATCACTCGAAAATATACTTGTCAAGATTCAATGGCCTCCAAGAGCCAGAAACTGATCCGGAACTTGGCAGTGGACTCAGTGGAGGGCTTCCCTACAGGCATCATAGAGATGGCAAAGAATTGCGAGCTGGATTCTTTGCATCTCACAGAGTACTTGAGATACCATGCACCATGGGACATATTACGAAGACGGTTTCGCGAAGGGACGGTGACCCTAGCAGGAGATGCCATGCATGCAATGGGTCCATTTCTTGCACAAGGAGGTTCAGCTTGTCTGGAAGATGCAATTGTACTTGCCCGGTGCTTGGCTCGAACGACTCAAATCCATCGAAACGCAAGAGGAACTAAAATGCAGGTGGAGGAAGCATTTGATGAATACCTGAAAGAACGTAAGATGCGAGTTCTGAGACTGTCTCTGCAGATGTACCTGATTGGGAAAATGCTTGATGCTTCATCGCAGTTTGTTAAATTCATATGCATTATCCTCTTGGCCGTCCTTTTCAGTGACTCACATGGCCATACCCGCTATGACTGTGGTAGCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

400

Amino Acids

44.23

Weight (kDa)

9.04

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 997
Acc36I ACCTGC 1 cut(s) 997
AccII CGCG 1 cut(s) 852
AccIII TCCGGA 1 cut(s) 711
AciI CCGC 2 cut(s) 54, 1177
AclWI GGATC 3 cut(s) 386, 399, 703
AcoI YGGCCR 2 cut(s) 1143, 1168
AcsI RAATTY 2 cut(s) 516, 1121
AfaI GTAC 3 cut(s) 806, 945, 1079
AfiI CCNNNNNNNGG 2 cut(s) 718, 958
AgsI TTSAA 4 cut(s) 419, 425, 442, 684
AjnI CCWGG 1 cut(s) 105
AjuI GAANNNNNNNTTGG 2 cut(s) 261, 293
AluBI AGCT 6 cut(s) 131, 143, 262, 622, 781, 923
AluI AGCT 6 cut(s) 131, 143, 262, 622, 781, 923
Alw21I GWGCWC 1 cut(s) 175
Alw26I GTCTC 2 cut(s) 1054, 1071
Alw44I GTGCAC 1 cut(s) 171
AlwI GGATC 3 cut(s) 386, 399, 703
AlwNI CAGNNNCTG 1 cut(s) 706
Ama87I CYCGRG 1 cut(s) 229
Aor13HI TCCGGA 1 cut(s) 711
AoxI GGCC 4 cut(s) 55, 687, 1143, 1168
ApaLI GTGCAC 1 cut(s) 171
ApeKI GCWGC 2 cut(s) 140, 622
ApoI RAATTY 2 cut(s) 516, 1121
Asp700I GAANNNNTTC 1 cut(s) 518
AspS9I GGNCC 1 cut(s) 896
AsuC2I CCSGG 1 cut(s) 952
AsuHPI GGTGA 5 cut(s) 23, 191, 514, 514, 874
AvaI CYCGRG 1 cut(s) 229
AvaII GGWCC 1 cut(s) 896
BaeGI GKGCMC 1 cut(s) 175
BaeI ACNNNNGTAYC 2 cut(s) 597, 630
BalI TGGCCA 1 cut(s) 1170
BamHI GGATCC 1 cut(s) 391
BauI CACGAG 1 cut(s) 547
BbsI GAAGAC 2 cut(s) 439, 847
Bbv12I GWGCWC 1 cut(s) 175
BbvI GCAGC 2 cut(s) 152, 609
BccI CCATC 4 cut(s) 490, 533, 757, 987
BceAI ACGGC 2 cut(s) 178, 1130
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 1 cut(s) 178
BcnI CCSGG 1 cut(s) 952
BcoDI GTCTC 2 cut(s) 1054, 1071
BfaI CTAG 2 cut(s) 641, 869
BfmI CTRYAG 3 cut(s) 132, 747, 1070
BfuAI ACCTGC 1 cut(s) 997
BisI GCNGC 3 cut(s) 55, 141, 623
BlsI GCNGC 3 cut(s) 56, 142, 624
BmcAI AGTACT 1 cut(s) 806
Bme1390I CCNGG 2 cut(s) 107, 952
Bme18I GGWCC 1 cut(s) 896
BmeT110I CYCGRG 1 cut(s) 229
BmgT120I GGNCC 1 cut(s) 896
BmiI GGNNCC 2 cut(s) 393, 897
BmrFI CCNGG 2 cut(s) 107, 952
BmsI GCATC 8 cut(s) 163, 452, 762, 802, 868, 925, 1038, 1090
BpiI GAAGAC 2 cut(s) 439, 847
BplI GAGNNNNNCTC 2 cut(s) 1051, 1083
BpuEI CTTGAG 1 cut(s) 829
BpuMI CCSGG 1 cut(s) 952
BsaAI YACGTR 1 cut(s) 347
BsaJI CCNNGG 1 cut(s) 824
BsaWI WCCGGW 1 cut(s) 711
BsaXI ACNNNNNCTCC 2 cut(s) 391, 421
Bsc4I CCNNNNNNNGG 2 cut(s) 718, 958
Bse3DI GCAATG 2 cut(s) 122, 897
BseAI TCCGGA 1 cut(s) 711
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 1 cut(s) 824
BseGI GGATG 2 cut(s) 154, 467
BseLI CCNNNNNNNGG 2 cut(s) 718, 958
BseMI GCAATG 2 cut(s) 122, 897
BseMII CTCAG 5 cut(s) 501, 593, 623, 744, 1049
BseSI GKGCMC 1 cut(s) 175
BseXI GCAGC 2 cut(s) 152, 609
Bsh1236I CGCG 1 cut(s) 852
BshFI GGCC 4 cut(s) 57, 689, 1145, 1170
BsiHKAI GWGCWC 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 229
BsiSI CCGG 2 cut(s) 712, 952
BslFI GGGAC 4 cut(s) 246, 630, 842, 871
BslI CCNNNNNNNGG 2 cut(s) 718, 958
BsmAI GTCTC 2 cut(s) 1054, 1071
BsmFI GGGAC 4 cut(s) 246, 630, 842, 871
BsnI GGCC 4 cut(s) 57, 689, 1145, 1170
BsoBI CYCGRG 1 cut(s) 229
Bsp1286I GDGCHC 1 cut(s) 175
Bsp13I TCCGGA 1 cut(s) 711
Bsp143I GATC 5 cut(s) 113, 178, 313, 391, 708
Bsp19I CCATGG 1 cut(s) 824
Bsp68I TCGCGA 1 cut(s) 852
BspACI CCGC 2 cut(s) 54, 1177
BspANI GGCC 4 cut(s) 57, 689, 1145, 1170
BspCNI CTCAG 5 cut(s) 502, 592, 622, 743, 1050
BspEI TCCGGA 1 cut(s) 711
BspFNI CGCG 1 cut(s) 852
BspLI GGNNCC 2 cut(s) 393, 897
BspMAI CTGCAG 1 cut(s) 1074
BspMI ACCTGC 1 cut(s) 997
BspPI GGATC 3 cut(s) 386, 399, 703
BspQI GCTCTTC 1 cut(s) 81
BsrDI GCAATG 2 cut(s) 122, 897
BssECI CCNNGG 1 cut(s) 824
BssMI GATC 5 cut(s) 113, 178, 313, 391, 708
BssSI CACGAG 1 cut(s) 547
BssT1I CCWWGG 1 cut(s) 824
Bst2BI CACGAG 1 cut(s) 547
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 4 cut(s) 846, 862, 1065, 1187
Bst6I CTCTTC 2 cut(s) 81, 360
BstAPI GCANNNNNTGC 1 cut(s) 878
BstBAI YACGTR 1 cut(s) 347
BstC8I GCNNGC 5 cut(s) 129, 167, 171, 779, 888
BstDEI CTNAG 6 cut(s) 203, 510, 579, 609, 730, 1058
BstDSI CCRYGG 1 cut(s) 824
BstEII GGTNACC 1 cut(s) 862
BstF5I GGATG 2 cut(s) 154, 467
BstFNI CGCG 1 cut(s) 852
BstKTI GATC 5 cut(s) 116, 181, 316, 394, 711
BstMAI GTCTC 2 cut(s) 1054, 1071
BstMBI GATC 5 cut(s) 113, 178, 313, 391, 708
BstMWI GCNNNNNNNGC 5 cut(s) 96, 137, 878, 887, 1176
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 890
BstPI GGTNACC 1 cut(s) 862
BstSCI CCNGG 2 cut(s) 105, 950
BstSFI CTRYAG 3 cut(s) 132, 747, 1070
BstSLI GKGCMC 1 cut(s) 175
BstUI CGCG 1 cut(s) 852
BstV1I GCAGC 2 cut(s) 152, 609
BstV2I GAAGAC 2 cut(s) 439, 847
BstX2I RGATCY 1 cut(s) 391
BstXI CCANNNNNNTGG 1 cut(s) 165
BstYI RGATCY 1 cut(s) 391
BsuRI GGCC 4 cut(s) 57, 689, 1145, 1170
BtgI CCRYGG 1 cut(s) 824
BtgZI GCGATG 1 cut(s) 1092
BtsCI GGATG 2 cut(s) 154, 467
BtsI GCAGTG 2 cut(s) 63, 729
BtsIMutI CAGTG 5 cut(s) 63, 535, 729, 738, 1162
BtuMI TCGCGA 1 cut(s) 852
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 5 cut(s) 129, 167, 171, 779, 888
CaiI CAGNNNCTG 1 cut(s) 706
Cfr13I GGNCC 1 cut(s) 896
Csp6I GTAC 3 cut(s) 805, 944, 1078
CspCI CAANNNNNGTGG 2 cut(s) 52, 87
CviAII CATG 6 cut(s) 566, 818, 825, 883, 887, 1166
CviQI GTAC 3 cut(s) 805, 944, 1078
DdeI CTNAG 6 cut(s) 203, 510, 579, 609, 730, 1058
DpnI GATC 5 cut(s) 115, 180, 315, 393, 710
DpnII GATC 5 cut(s) 113, 178, 313, 391, 708
EaeI YGGCCR 2 cut(s) 1143, 1168
Eam1104I CTCTTC 2 cut(s) 81, 360
EarI CTCTTC 2 cut(s) 81, 360
Eco130I CCWWGG 1 cut(s) 824
Eco47I GGWCC 1 cut(s) 896
Eco88I CYCGRG 1 cut(s) 229
Eco91I GGTNACC 1 cut(s) 862
EcoO65I GGTNACC 1 cut(s) 862
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 1 cut(s) 824
EcoT22I ATGCAT 2 cut(s) 888, 1133
ErhI CCWWGG 1 cut(s) 824
FaeI CATG 6 cut(s) 569, 821, 828, 886, 890, 1169
FaqI GGGAC 4 cut(s) 246, 630, 842, 871
FatI CATG 6 cut(s) 565, 817, 824, 882, 886, 1165
FauI CCCGC 1 cut(s) 1184
FauNDI CATATG 1 cut(s) 1127
FbaI TGATCA 1 cut(s) 178
Fnu4HI GCNGC 3 cut(s) 55, 141, 623
FokI GGATG 2 cut(s) 141, 474
Fsp4HI GCNGC 3 cut(s) 55, 141, 623
FspBI CTAG 2 cut(s) 641, 869
GluI GCNGC 3 cut(s) 55, 141, 623
HaeIII GGCC 4 cut(s) 57, 689, 1145, 1170
HapII CCGG 2 cut(s) 712, 952
Hin1II CATG 6 cut(s) 569, 821, 828, 886, 890, 1169
HinfI GANTC 5 cut(s) 680, 728, 785, 970, 1160
HpaII CCGG 2 cut(s) 712, 952
HphI GGTGA 5 cut(s) 23, 191, 514, 514, 874
Hpy166II GTNNAC 3 cut(s) 173, 475, 727
Hpy188I TCNGA 2 cut(s) 587, 1059
Hpy188III TCNNGA 6 cut(s) 231, 547, 677, 712, 851, 929
Hpy8I GTNNAC 3 cut(s) 173, 475, 727
Hpy99I CGWCG 1 cut(s) 470
HpyAV CCTTC 3 cut(s) 300, 499, 848
HpyCH4III ACNGT 4 cut(s) 846, 862, 1065, 1187
HpyCH4IV ACGT 2 cut(s) 346, 1042
HpyF10VI GCNNNNNNNGC 5 cut(s) 96, 137, 878, 887, 1176
HpyF3I CTNAG 6 cut(s) 203, 510, 579, 609, 730, 1058
HpySE526I ACGT 2 cut(s) 346, 1042
Hsp92II CATG 6 cut(s) 569, 821, 828, 886, 890, 1169
Kpn2I TCCGGA 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 5 cut(s) 113, 178, 313, 391, 708
LguI GCTCTTC 1 cut(s) 81
Lsp1109I GCAGC 2 cut(s) 152, 609
LweI GCATC 8 cut(s) 163, 452, 762, 802, 868, 925, 1038, 1090
MaeI CTAG 2 cut(s) 641, 869
MaeII ACGT 2 cut(s) 346, 1042
MaeIII GTNAC 3 cut(s) 347, 862, 1157
MalI GATC 5 cut(s) 115, 180, 315, 393, 710
MboI GATC 5 cut(s) 113, 178, 313, 391, 708
MboII GAAGA 8 cut(s) 68, 299, 347, 396, 407, 444, 852, 944
MfeI CAATTG 1 cut(s) 939
MflI RGATCY 1 cut(s) 391
MhlI GDGCHC 1 cut(s) 175
MlsI TGGCCA 1 cut(s) 1170
MluCI AATT 6 cut(s) 236, 290, 516, 772, 939, 1121
MluNI TGGCCA 1 cut(s) 1170
MlyI GAGTC 3 cut(s) 722, 964, 1154
MmeI TCCRAC 1 cut(s) 369
MnlI CCTC 8 cut(s) 205, 533, 700, 730, 908, 986, 1006, 1148
Mox20I TGGCCA 1 cut(s) 1170
Mph1103I ATGCAT 2 cut(s) 888, 1133
MroI TCCGGA 1 cut(s) 711
MroXI GAANNNNTTC 1 cut(s) 518
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 4 cut(s) 264, 384, 590, 1119
MslI CAYNNNNRTG 2 cut(s) 530, 761
Msp20I TGGCCA 1 cut(s) 1170
MspA1I CMGCKG 1 cut(s) 622
MspI CCGG 2 cut(s) 712, 952
MspR9I CCNGG 2 cut(s) 107, 952
MunI CAATTG 1 cut(s) 939
MvaI CCWGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 852
MwoI GCNNNNNNNGC 5 cut(s) 96, 137, 878, 887, 1176
NciI CCSGG 1 cut(s) 952
NcoI CCATGG 1 cut(s) 824
NdeI CATATG 1 cut(s) 1127
NdeII GATC 5 cut(s) 113, 178, 313, 391, 708
NlaIII CATG 6 cut(s) 569, 821, 828, 886, 890, 1169
NlaIV GGNNCC 2 cut(s) 393, 897
NmeAIII GCCGAG 1 cut(s) 552
NmuCI GTSAC 2 cut(s) 862, 1157
NruI TCGCGA 1 cut(s) 852
NsiI ATGCAT 2 cut(s) 888, 1133
NspI RCATGY 1 cut(s) 890
PaeI GCATGC 1 cut(s) 890
PaqCI CACCTGC 1 cut(s) 997
PciSI GCTCTTC 1 cut(s) 81
PcsI WCGNNNNNNNCGW 1 cut(s) 1048
PdmI GAANNNNTTC 1 cut(s) 518
PfeI GAWTC 2 cut(s) 680, 785
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 3 cut(s) 56, 142, 624
PleI GAGTC 3 cut(s) 722, 964, 1154
PpsI GAGTC 3 cut(s) 722, 964, 1154
Ppu21I YACGTR 1 cut(s) 347
Psp6I CCWGG 1 cut(s) 105
PspEI GGTNACC 1 cut(s) 862
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 393, 897
PspPI GGNCC 1 cut(s) 896
PstI CTGCAG 1 cut(s) 1074
PstNI CAGNNNCTG 1 cut(s) 706
PsuI RGATCY 1 cut(s) 391
PvuII CAGCTG 1 cut(s) 622
RruI TCGCGA 1 cut(s) 852
RsaI GTAC 3 cut(s) 806, 945, 1079
RsaNI GTAC 3 cut(s) 805, 944, 1078
RseI CAYNNNNRTG 2 cut(s) 530, 761
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 4 cut(s) 264, 384, 590, 1119
SatI GCNGC 3 cut(s) 55, 141, 623
Sau3AI GATC 5 cut(s) 113, 178, 313, 391, 708
Sau96I GGNCC 1 cut(s) 896
ScaI AGTACT 1 cut(s) 806
SchI GAGTC 3 cut(s) 722, 964, 1154
ScrFI CCNGG 2 cut(s) 107, 952
SduI GDGCHC 1 cut(s) 175
SfaNI GCATC 8 cut(s) 163, 452, 762, 802, 868, 925, 1038, 1090
SfcI CTRYAG 3 cut(s) 132, 747, 1070
SinI GGWCC 1 cut(s) 896
SmiMI CAYNNNNRTG 2 cut(s) 530, 761
SmlI CTYRAG 1 cut(s) 808
SmoI CTYRAG 1 cut(s) 808
SphI GCATGC 1 cut(s) 890
Sse9I AATT 6 cut(s) 236, 290, 516, 772, 939, 1121
SsiI CCGC 2 cut(s) 54, 1177
SspI AATATT 1 cut(s) 28
SspMI CTAG 2 cut(s) 641, 869
StyD4I CCNGG 2 cut(s) 105, 950
StyI CCWWGG 1 cut(s) 824
TaaI ACNGT 4 cut(s) 846, 862, 1065, 1187
TaiI ACGT 2 cut(s) 349, 1045
TaqI TCGA 3 cut(s) 661, 964, 982
TasI AATT 6 cut(s) 236, 290, 516, 772, 939, 1121
TatI WGTACW 2 cut(s) 804, 943
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 2 cut(s) 680, 785
Tru1I TTAA 4 cut(s) 264, 384, 590, 1119
Tru9I TTAA 4 cut(s) 264, 384, 590, 1119
TscAI CASTG 5 cut(s) 70, 535, 729, 738, 1162
TseFI GTSAC 2 cut(s) 862, 1157
TseI GCWGC 2 cut(s) 140, 622
Tsp45I GTSAC 2 cut(s) 862, 1157
TspDTI ATGAA 6 cut(s) 347, 582, 643, 1041, 1095, 1114
TspGWI ACGGA 1 cut(s) 483
TspRI CASTG 5 cut(s) 70, 535, 729, 738, 1162
VneI GTGCAC 1 cut(s) 171
VpaK11BI GGWCC 1 cut(s) 896
XapI RAATTY 2 cut(s) 516, 1121
XceI RCATGY 1 cut(s) 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XmnI GAANNNNTTC 1 cut(s) 518
XspI CTAG 2 cut(s) 641, 869
ZrmI AGTACT 1 cut(s) 806
Zsp2I ATGCAT 2 cut(s) 888, 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.