Prupe.8G046000_v2.0.a1

FAD binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
4858689 .. 4861676
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G046000.2

Sequence Viewer

Length: 1215 bp
ATGGAAGTAGCTGAAGAGACGGAGATTGCCATAGTTGGTGGTGGAATCTGCGGCCTTGCAACTGCCCTTGCTCTTCATAGGAAGGGTTTGAGGAGTGTGGTGTTGGAAAGATCAGAATCCCTGCGTGCCACCGGGGCAGGAATCACCATTCGAACAAATGGTTGGCGAGCTTTGGATGAACTTGGTGTGGCCTCAAAGCTCAGACAGACTGCCATGCCGCTTCAAGGGGCTAGAGACATATGCCTCAATAGTGGGAAGCAACGAGAAATACCGCTTGGAGGTGGGGAAACAAGATGCCTGAAACGGATGGATCTGATCACAGCACTAGCAGAGAGCTTGCCACGTGGCACCATACGCCTTGGATGCCAAGCACTCTCTGTTAGGTTAGACTCATCAACTTCCAGTCCAAGTCTTCATCTCCAGAATGGAAGCTCCATCAAAGCCAAGGTTTTGATTGGATGTGATGGAACGAACTCAGTTGTTGCGGATTTTCTTGACCTAAAACCATCAAAGCTCTTCTCATTATCGGAGGTTAGAGGTTTTACAATGTATCCAAGTGGTCATAATTTTGGGAACCAGTTTGTCCAAGTTAAGGGTGACAAGTGCACAGTTGGAAGAATACCCATTCATAATAAATTGGTTTATTGGTTCGTCACTCAGAAAGTCATGTATGGTAGAGGAGGGTTGGAGGTTCCAAAGGATCCGGAGCTCATTCGGCAACTGACATTAGAAGCAATCAAAGACTTCCCTTCAGAAATGATAGACATGATAAGCAAGAGTGACACAAAATCATTATCTAACACACGCTTGAGATACCGTTCGCCGTGGGACATTCTGGTACGAAACTTTCGAAAAGGAAGCGTGACAGTGGCCGGCGATGCCATGCATACGATGGGACCTTTCCTTGGCCAGGGTGGCTCTGCTGGCATTGAAGACTCCATTGTCATTGCTAGATGTTTGGCTCAGGAGTTGGCTGAAAATTATGATAAAAAATCAAGGGCAAGGAATATAATGATGATGAAAGTGGAAGAGGCTTTGGATAAGTACGTGAAGGAAAGAAGGATGAGATTGGTGCTGCTGTCAACACAAACTTATCTTGCTGGTTTGCTACAACAAGATTCAGGGTTGATTGTCAAATTTGTGTGTATCTTCTTGATGACAGCTCTTTTTAGTGATATGACTCGTCACACTCGATATGATTGTGGATGCCTTTAA

Protein Analysis

405

Amino Acids

44.46

Weight (kDa)

9.31

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 941
AccB1I GGYRCC 1 cut(s) 347
AccIII TCCGGA 1 cut(s) 703
AciI CCGC 4 cut(s) 51, 218, 272, 485
AclWI GGATC 3 cut(s) 318, 695, 708
AcoI YGGCCR 2 cut(s) 870, 907
AcsI RAATTY 1 cut(s) 1136
AcuI CTGAAG 2 cut(s) 33, 735
AcvI CACGTG 1 cut(s) 344
AfaI GTAC 2 cut(s) 840, 1046
AfiI CCNNNNNNNGG 5 cut(s) 224, 278, 592, 905, 910
AgsI TTSAA 2 cut(s) 224, 932
AjnI CCWGG 1 cut(s) 909
AjuI GAANNNNNNNTTGG 4 cut(s) 145, 177, 258, 290
AluBI AGCT 8 cut(s) 11, 170, 199, 336, 432, 514, 709, 1163
AluI AGCT 8 cut(s) 11, 170, 199, 336, 432, 514, 709, 1163
Alw21I GWGCWC 2 cut(s) 608, 711
Alw26I GTCTC 2 cut(s) 11, 228
Alw44I GTGCAC 1 cut(s) 604
AlwI GGATC 3 cut(s) 318, 695, 708
Aor13HI TCCGGA 1 cut(s) 703
AoxI GGCC 4 cut(s) 52, 189, 870, 907
ApaLI GTGCAC 1 cut(s) 604
ApeKI GCWGC 1 cut(s) 1075
ApoI RAATTY 1 cut(s) 1136
AspS9I GGNCC 1 cut(s) 896
AsuC2I CCSGG 1 cut(s) 133
AsuHPI GGTGA 2 cut(s) 136, 608
AsuII TTCGAA 2 cut(s) 151, 850
AvaII GGWCC 1 cut(s) 896
BaeGI GKGCMC 1 cut(s) 608
BalI TGGCCA 1 cut(s) 909
BamHI GGATCC 1 cut(s) 700
BanI GGYRCC 1 cut(s) 347
BanII GRGCYC 1 cut(s) 711
BbrPI CACGTG 1 cut(s) 344
BbsI GAAGAC 2 cut(s) 404, 939
Bbv12I GWGCWC 2 cut(s) 608, 711
BbvI GCAGC 1 cut(s) 1062
BccI CCATC 5 cut(s) 301, 443, 458, 514, 886
BceAI ACGGC 1 cut(s) 808
BciT130I CCWGG 1 cut(s) 911
BciVI GTATCC 1 cut(s) 561
BclI TGATCA 1 cut(s) 315
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 2 cut(s) 11, 228
BfaI CTAG 3 cut(s) 231, 326, 951
BfuI GTATCC 1 cut(s) 561
BglI GCCNNNNNGGC 2 cut(s) 134, 915
BisI GCNGC 3 cut(s) 52, 218, 1076
BlsI GCNGC 3 cut(s) 53, 219, 1077
Bme1390I CCNGG 2 cut(s) 133, 911
Bme18I GGWCC 1 cut(s) 896
BmgT120I GGNCC 1 cut(s) 896
BmiI GGNNCC 5 cut(s) 349, 575, 693, 702, 897
BmrFI CCNGG 2 cut(s) 133, 911
BmsI GCATC 4 cut(s) 284, 353, 868, 1196
BpiI GAAGAC 2 cut(s) 404, 939
BpmI CTGGAG 1 cut(s) 404
Bpu10I CCTNAGC 1 cut(s) 963
Bpu14I TTCGAA 2 cut(s) 151, 850
BpuEI CTTGAG 1 cut(s) 829
BpuMI CCSGG 1 cut(s) 133
BsaAI YACGTR 2 cut(s) 344, 1048
BsaBI GATNNNNATC 1 cut(s) 115
BsaJI CCNNGG 6 cut(s) 132, 358, 444, 824, 904, 910
BsaWI WCCGGW 1 cut(s) 703
Bsc4I CCNNNNNNNGG 5 cut(s) 224, 278, 592, 905, 910
Bse118I RCCGGY 1 cut(s) 872
Bse1I ACTGG 2 cut(s) 402, 577
Bse3DI GCAATG 1 cut(s) 945
Bse8I GATNNNNATC 1 cut(s) 115
BseAI TCCGGA 1 cut(s) 703
BseBI CCWGG 1 cut(s) 911
BseDI CCNNGG 6 cut(s) 132, 358, 444, 824, 904, 910
BseGI GGATG 6 cut(s) 181, 312, 368, 464, 1068, 1211
BseJI GATNNNNATC 1 cut(s) 115
BseLI CCNNNNNNNGG 5 cut(s) 224, 278, 592, 905, 910
BseMI GCAATG 1 cut(s) 945
BseMII CTCAG 4 cut(s) 214, 489, 671, 977
BseNI ACTGG 2 cut(s) 402, 577
BseRI GAGGAG 2 cut(s) 106, 693
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 1 cut(s) 1062
BshFI GGCC 4 cut(s) 54, 191, 872, 909
BshNI GGYRCC 1 cut(s) 347
BsiHKAI GWGCWC 2 cut(s) 608, 711
BsiSI CCGG 3 cut(s) 132, 704, 873
BslFI GGGAC 2 cut(s) 842, 909
BslI CCNNNNNNNGG 5 cut(s) 224, 278, 592, 905, 910
BsmAI GTCTC 2 cut(s) 11, 228
BsmBI CGTCTC 1 cut(s) 11
BsmFI GGGAC 2 cut(s) 842, 909
BsnI GGCC 4 cut(s) 54, 191, 872, 909
Bsp119I TTCGAA 2 cut(s) 151, 850
Bsp1286I GDGCHC 2 cut(s) 608, 711
Bsp13I TCCGGA 1 cut(s) 703
Bsp143I GATC 4 cut(s) 110, 310, 315, 700
BspACI CCGC 4 cut(s) 51, 218, 272, 485
BspANI GGCC 4 cut(s) 54, 191, 872, 909
BspCNI CTCAG 4 cut(s) 213, 488, 670, 976
BspEI TCCGGA 1 cut(s) 703
BspLI GGNNCC 5 cut(s) 349, 575, 693, 702, 897
BspPI GGATC 3 cut(s) 318, 695, 708
BspQI GCTCTTC 2 cut(s) 78, 521
BspT104I TTCGAA 2 cut(s) 151, 850
BspT107I GGYRCC 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 945
BsrFI RCCGGY 1 cut(s) 872
BsrI ACTGG 2 cut(s) 402, 577
BssAI RCCGGY 1 cut(s) 872
BssECI CCNNGG 6 cut(s) 132, 358, 444, 824, 904, 910
BssMI GATC 4 cut(s) 110, 310, 315, 700
BssT1I CCWWGG 3 cut(s) 358, 444, 904
Bst2UI CCWGG 1 cut(s) 911
Bst4CI ACNGT 3 cut(s) 610, 818, 868
Bst6I CTCTTC 4 cut(s) 9, 78, 521, 1023
BstBAI YACGTR 2 cut(s) 344, 1048
BstBI TTCGAA 2 cut(s) 151, 850
BstC8I GCNNGC 5 cut(s) 126, 168, 338, 874, 925
BstDEI CTNAG 4 cut(s) 200, 475, 657, 963
BstDSI CCRYGG 1 cut(s) 824
BstENI CCTNNNNNAGG 1 cut(s) 908
BstF5I GGATG 6 cut(s) 181, 312, 368, 464, 1068, 1211
BstKTI GATC 4 cut(s) 113, 313, 318, 703
BstMAI GTCTC 2 cut(s) 11, 228
BstMBI GATC 4 cut(s) 110, 310, 315, 700
BstMWI GCNNNNNNNGC 7 cut(s) 134, 354, 363, 715, 878, 915, 924
BstNI CCWGG 1 cut(s) 911
BstSCI CCNGG 2 cut(s) 131, 909
BstSLI GKGCMC 1 cut(s) 608
BstV1I GCAGC 1 cut(s) 1062
BstV2I GAAGAC 2 cut(s) 404, 939
BstX2I RGATCY 2 cut(s) 310, 700
BstYI RGATCY 2 cut(s) 310, 700
BsuI GTATCC 1 cut(s) 561
BsuRI GGCC 4 cut(s) 54, 191, 872, 909
BtgI CCRYGG 1 cut(s) 824
BtgZI GCGATG 1 cut(s) 891
BtsCI GGATG 6 cut(s) 181, 312, 368, 464, 1068, 1211
BtsIMutI CAGTG 1 cut(s) 873
Cac8I GCNNGC 5 cut(s) 126, 168, 338, 874, 925
Cfr10I RCCGGY 1 cut(s) 872
Cfr13I GGNCC 1 cut(s) 896
Csp6I GTAC 2 cut(s) 839, 1045
CviAII CATG 4 cut(s) 214, 667, 766, 883
CviQI GTAC 2 cut(s) 839, 1045
DdeI CTNAG 4 cut(s) 200, 475, 657, 963
DpnI GATC 4 cut(s) 112, 312, 317, 702
DpnII GATC 4 cut(s) 110, 310, 315, 700
DrdI GACNNNNNNGTC 1 cut(s) 941
DseDI GACNNNNNNGTC 1 cut(s) 941
EaeI YGGCCR 2 cut(s) 870, 907
Eam1104I CTCTTC 4 cut(s) 9, 78, 521, 1023
EarI CTCTTC 4 cut(s) 9, 78, 521, 1023
Ecl136II GAGCTC 1 cut(s) 709
Eco130I CCWWGG 3 cut(s) 358, 444, 904
Eco24I GRGCYC 1 cut(s) 711
Eco47I GGWCC 1 cut(s) 896
Eco53kI GAGCTC 1 cut(s) 709
Eco57I CTGAAG 2 cut(s) 33, 735
Eco72I CACGTG 1 cut(s) 344
EcoICRI GAGCTC 1 cut(s) 709
EcoNI CCTNNNNNAGG 1 cut(s) 908
EcoO109I RGGNCCY 1 cut(s) 896
EcoRII CCWGG 1 cut(s) 909
EcoT14I CCWWGG 3 cut(s) 358, 444, 904
EcoT22I ATGCAT 1 cut(s) 888
EcoT38I GRGCYC 1 cut(s) 711
ErhI CCWWGG 3 cut(s) 358, 444, 904
Esp3I CGTCTC 1 cut(s) 11
FaeI CATG 4 cut(s) 217, 670, 769, 886
FaqI GGGAC 2 cut(s) 842, 909
FatI CATG 4 cut(s) 213, 666, 765, 882
FauNDI CATATG 1 cut(s) 239
FbaI TGATCA 1 cut(s) 315
Fnu4HI GCNGC 3 cut(s) 52, 218, 1076
FokI GGATG 5 cut(s) 188, 319, 375, 471, 1075
FriOI GRGCYC 1 cut(s) 711
Fsp4HI GCNGC 3 cut(s) 52, 218, 1076
FspBI CTAG 3 cut(s) 231, 326, 951
GluI GCNGC 3 cut(s) 52, 218, 1076
GsuI CTGGAG 1 cut(s) 404
HaeIII GGCC 4 cut(s) 54, 191, 872, 909
HapII CCGG 3 cut(s) 132, 704, 873
Hin1II CATG 4 cut(s) 217, 670, 769, 886
HincII GTYRAC 1 cut(s) 1083
HindII GTYRAC 1 cut(s) 1083
HinfI GANTC 7 cut(s) 45, 116, 141, 389, 935, 1118, 1180
HpaII CCGG 3 cut(s) 132, 704, 873
HphI GGTGA 2 cut(s) 136, 608
Hpy166II GTNNAC 2 cut(s) 606, 1083
Hpy188I TCNGA 6 cut(s) 115, 203, 315, 529, 660, 754
Hpy188III TCNNGA 5 cut(s) 421, 494, 704, 965, 1153
Hpy8I GTNNAC 2 cut(s) 606, 1083
HpyAV CCTTC 4 cut(s) 76, 759, 1045, 1053
HpyCH4III ACNGT 3 cut(s) 610, 818, 868
HpyCH4IV ACGT 2 cut(s) 343, 1047
HpyCH4V TGCA 3 cut(s) 59, 606, 886
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 354, 363, 715, 878, 915, 924
HpyF3I CTNAG 4 cut(s) 200, 475, 657, 963
HpySE526I ACGT 2 cut(s) 343, 1047
Hsp92II CATG 4 cut(s) 217, 670, 769, 886
Kpn2I TCCGGA 1 cut(s) 703
KroI GCCGGC 1 cut(s) 872
KroNI GCCGGC 1 cut(s) 874
Ksp22I TGATCA 1 cut(s) 315
Kzo9I GATC 4 cut(s) 110, 310, 315, 700
LguI GCTCTTC 2 cut(s) 78, 521
LmnI GCTCC 2 cut(s) 437, 706
Lsp1109I GCAGC 1 cut(s) 1062
LweI GCATC 4 cut(s) 284, 353, 868, 1196
MaeI CTAG 3 cut(s) 231, 326, 951
MaeII ACGT 2 cut(s) 343, 1047
MaeIII GTNAC 5 cut(s) 596, 652, 779, 862, 1184
MalI GATC 4 cut(s) 112, 312, 317, 702
MboI GATC 4 cut(s) 110, 310, 315, 700
MboII GAAGA 8 cut(s) 26, 65, 404, 508, 627, 944, 1040, 1141
MflI RGATCY 2 cut(s) 310, 700
MhlI GDGCHC 2 cut(s) 608, 711
MlsI TGGCCA 1 cut(s) 909
MluCI AATT 4 cut(s) 565, 635, 979, 1136
MluNI TGGCCA 1 cut(s) 909
MlyI GAGTC 3 cut(s) 383, 929, 1174
MmeI TCCRAC 3 cut(s) 84, 592, 666
Mox20I TGGCCA 1 cut(s) 909
Mph1103I ATGCAT 1 cut(s) 888
MroI TCCGGA 1 cut(s) 703
MroNI GCCGGC 1 cut(s) 872
MscI TGGCCA 1 cut(s) 909
MseI TTAA 2 cut(s) 591, 1213
Msp20I TGGCCA 1 cut(s) 909
MspI CCGG 3 cut(s) 132, 704, 873
MspR9I CCNGG 2 cut(s) 133, 911
MvaI CCWGG 1 cut(s) 911
MwoI GCNNNNNNNGC 7 cut(s) 134, 354, 363, 715, 878, 915, 924
NaeI GCCGGC 1 cut(s) 874
NciI CCSGG 1 cut(s) 133
NdeI CATATG 1 cut(s) 239
NdeII GATC 4 cut(s) 110, 310, 315, 700
NgoMIV GCCGGC 1 cut(s) 872
NlaIII CATG 4 cut(s) 217, 670, 769, 886
NlaIV GGNNCC 5 cut(s) 349, 575, 693, 702, 897
NmuCI GTSAC 5 cut(s) 596, 652, 779, 862, 1184
NsiI ATGCAT 1 cut(s) 888
NspV TTCGAA 2 cut(s) 151, 850
PciSI GCTCTTC 2 cut(s) 78, 521
PcsI WCGNNNNNNNCGW 2 cut(s) 847, 1189
PdiI GCCGGC 1 cut(s) 874
PfeI GAWTC 4 cut(s) 45, 116, 141, 1118
PkrI GCNGC 3 cut(s) 53, 219, 1077
PleI GAGTC 3 cut(s) 383, 929, 1174
PmaCI CACGTG 1 cut(s) 344
PmlI CACGTG 1 cut(s) 344
PpsI GAGTC 3 cut(s) 383, 929, 1174
Ppu21I YACGTR 2 cut(s) 344, 1048
PpuMI RGGWCCY 1 cut(s) 896
Psp124BI GAGCTC 1 cut(s) 711
Psp5II RGGWCCY 1 cut(s) 896
Psp6I CCWGG 1 cut(s) 909
PspCI CACGTG 1 cut(s) 344
PspGI CCWGG 1 cut(s) 909
PspN4I GGNNCC 5 cut(s) 349, 575, 693, 702, 897
PspPI GGNCC 1 cut(s) 896
PspPPI RGGWCCY 1 cut(s) 896
PsuI RGATCY 2 cut(s) 310, 700
RsaI GTAC 2 cut(s) 840, 1046
RsaNI GTAC 2 cut(s) 839, 1045
SacI GAGCTC 1 cut(s) 711
SapI GCTCTTC 2 cut(s) 78, 521
SaqAI TTAA 2 cut(s) 591, 1213
SatI GCNGC 3 cut(s) 52, 218, 1076
Sau3AI GATC 4 cut(s) 110, 310, 315, 700
Sau96I GGNCC 1 cut(s) 896
SchI GAGTC 3 cut(s) 383, 929, 1174
ScrFI CCNGG 2 cut(s) 133, 911
SduI GDGCHC 2 cut(s) 608, 711
SfaNI GCATC 4 cut(s) 284, 353, 868, 1196
SfuI TTCGAA 2 cut(s) 151, 850
SinI GGWCC 1 cut(s) 896
SmlI CTYRAG 1 cut(s) 808
SmoI CTYRAG 1 cut(s) 808
Sse9I AATT 4 cut(s) 565, 635, 979, 1136
SsiI CCGC 4 cut(s) 51, 218, 272, 485
SspMI CTAG 3 cut(s) 231, 326, 951
SstI GAGCTC 1 cut(s) 711
StyD4I CCNGG 2 cut(s) 131, 909
StyI CCWWGG 3 cut(s) 358, 444, 904
TaaI ACNGT 3 cut(s) 610, 818, 868
TaiI ACGT 2 cut(s) 346, 1050
TaqI TCGA 3 cut(s) 151, 850, 1192
TasI AATT 4 cut(s) 565, 635, 979, 1136
TauI GCSGC 2 cut(s) 54, 220
TfiI GAWTC 4 cut(s) 45, 116, 141, 1118
Tru1I TTAA 2 cut(s) 591, 1213
Tru9I TTAA 2 cut(s) 591, 1213
TscAI CASTG 1 cut(s) 873
TseFI GTSAC 5 cut(s) 596, 652, 779, 862, 1184
TseI GCWGC 1 cut(s) 1075
Tsp45I GTSAC 5 cut(s) 596, 652, 779, 862, 1184
TspDTI ATGAA 5 cut(s) 65, 192, 404, 617, 1034
TspGWI ACGGA 2 cut(s) 35, 319
TspRI CASTG 1 cut(s) 873
VneI GTGCAC 1 cut(s) 604
VpaK11BI GGWCC 1 cut(s) 896
XagI CCTNNNNNAGG 1 cut(s) 908
XapI RAATTY 1 cut(s) 1136
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XspI CTAG 3 cut(s) 231, 326, 951
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.