transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06170 AT1G06170 AT2G31210 AT2G31220 AT2G31220 |
| fragaria_vesca | FvH4_7g02380 FvH4_7g07050 |
| malus_domestica | MD02G1240400.v1.1 MD02G1240500.v1.1 MD07G1076400.v1.1 MD07G1076500.v1.1 |
| prunus_persica | Prupe.2G097200_v2.0.a1 Prupe.2G097200_v2.0.a1 Prupe.2G097400_v2.0.a1 |
| pyrus_communis | pycom02g20560 pycom02g20570 pycom07g06020 |
| rosa_chinensis | RchiOBHm_Chr1g0337011 |
| rosa_laevigata | RLG00000029312 |
| rosa_multiflora | Rmu_co8055130.1_g000001 Rmu_sc0009742.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00315050 |
| rosa_rugosa | Rorug01G0130300 Rorug01G0130400 Rorug01G0130400 |
| rosa_samantha | Rh1AG150800 Rh1BG119200 Rh1CG142000 Rh1DG158400 |
| rosa_wichuraiana | Rw1G012340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 290 |
| AccB1I | GGYRCC | 1 cut(s) | 159 |
| AciI | CCGC | 1 cut(s) | 301 |
| AclWI | GGATC | 2 cut(s) | 44, 234 |
| AcuI | CTGAAG | 1 cut(s) | 432 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AgsI | TTSAA | 2 cut(s) | 79, 451 |
| AjnI | CCWGG | 1 cut(s) | 330 |
| AluBI | AGCT | 9 cut(s) | 127, 201, 258, 376, 388, 394, 441, 491, 505 |
| AluI | AGCT | 9 cut(s) | 127, 201, 258, 376, 388, 394, 441, 491, 505 |
| Alw21I | GWGCWC | 1 cut(s) | 260 |
| AlwI | GGATC | 2 cut(s) | 44, 234 |
| ApeKI | GCWGC | 4 cut(s) | 388, 391, 441, 533 |
| AsuHPI | GGTGA | 2 cut(s) | 206, 509 |
| AxyI | CCTNAGG | 1 cut(s) | 222 |
| BanI | GGYRCC | 1 cut(s) | 159 |
| BanII | GRGCYC | 1 cut(s) | 260 |
| Bbv12I | GWGCWC | 1 cut(s) | 260 |
| BbvI | GCAGC | 4 cut(s) | 375, 403, 428, 545 |
| BccI | CCATC | 2 cut(s) | 170, 185 |
| BciT130I | CCWGG | 1 cut(s) | 332 |
| BfmI | CTRYAG | 3 cut(s) | 389, 436, 492 |
| BisI | GCNGC | 4 cut(s) | 389, 392, 442, 534 |
| BlsI | GCNGC | 4 cut(s) | 390, 393, 443, 535 |
| Bme1390I | CCNGG | 1 cut(s) | 332 |
| BmiI | GGNNCC | 2 cut(s) | 111, 161 |
| BmrFI | CCNGG | 1 cut(s) | 332 |
| BmsI | GCATC | 1 cut(s) | 450 |
| BpuEI | CTTGAG | 1 cut(s) | 118 |
| Bsa29I | ATCGAT | 1 cut(s) | 309 |
| Bse1I | ACTGG | 2 cut(s) | 73, 549 |
| Bse21I | CCTNAGG | 1 cut(s) | 222 |
| BseBI | CCWGG | 1 cut(s) | 332 |
| BseCI | ATCGAT | 1 cut(s) | 309 |
| BseMII | CTCAG | 4 cut(s) | 45, 236, 242, 279 |
| BseNI | ACTGG | 2 cut(s) | 73, 549 |
| BseRI | GAGGAG | 2 cut(s) | 79, 268 |
| BseXI | GCAGC | 4 cut(s) | 375, 403, 428, 545 |
| BshNI | GGYRCC | 1 cut(s) | 159 |
| BshVI | ATCGAT | 1 cut(s) | 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 260 |
| Bsp143I | GATC | 3 cut(s) | 36, 226, 397 |
| BspACI | CCGC | 1 cut(s) | 301 |
| BspCNI | CTCAG | 4 cut(s) | 46, 235, 243, 280 |
| BspDI | ATCGAT | 1 cut(s) | 309 |
| BspLI | GGNNCC | 2 cut(s) | 111, 161 |
| BspMAI | CTGCAG | 1 cut(s) | 393 |
| BspPI | GGATC | 2 cut(s) | 44, 234 |
| BspT107I | GGYRCC | 1 cut(s) | 159 |
| BsrI | ACTGG | 2 cut(s) | 73, 549 |
| BssMI | GATC | 3 cut(s) | 36, 226, 397 |
| Bst2UI | CCWGG | 1 cut(s) | 332 |
| Bst4CI | ACNGT | 1 cut(s) | 92 |
| Bst6I | CTCTTC | 2 cut(s) | 10, 16 |
| BstC8I | GCNNGC | 1 cut(s) | 187 |
| BstDEI | CTNAG | 4 cut(s) | 54, 222, 251, 288 |
| BstKTI | GATC | 3 cut(s) | 39, 229, 400 |
| BstMBI | GATC | 3 cut(s) | 36, 226, 397 |
| BstNI | CCWGG | 1 cut(s) | 332 |
| BstSCI | CCNGG | 1 cut(s) | 330 |
| BstSFI | CTRYAG | 3 cut(s) | 389, 436, 492 |
| BstV1I | GCAGC | 4 cut(s) | 375, 403, 428, 545 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 80 |
| Bsu15I | ATCGAT | 1 cut(s) | 309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 222 |
| BsuTUI | ATCGAT | 1 cut(s) | 309 |
| BtgZI | GCGATG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 3 cut(s) | 51, 97, 285 |
| Cac8I | GCNNGC | 1 cut(s) | 187 |
| ClaI | ATCGAT | 1 cut(s) | 309 |
| CsiI | ACCWGGT | 1 cut(s) | 330 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 111, 146 |
| CviAII | CATG | 3 cut(s) | 261, 407, 464 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DdeI | CTNAG | 4 cut(s) | 54, 222, 251, 288 |
| DpnI | GATC | 3 cut(s) | 38, 228, 399 |
| DpnII | GATC | 3 cut(s) | 36, 226, 397 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 290 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 290 |
| Eam1104I | CTCTTC | 2 cut(s) | 10, 16 |
| EarI | CTCTTC | 2 cut(s) | 10, 16 |
| Ecl136II | GAGCTC | 1 cut(s) | 258 |
| Eco24I | GRGCYC | 1 cut(s) | 260 |
| Eco32I | GATATC | 1 cut(s) | 298 |
| Eco53kI | GAGCTC | 1 cut(s) | 258 |
| Eco57I | CTGAAG | 1 cut(s) | 432 |
| Eco81I | CCTNAGG | 1 cut(s) | 222 |
| EcoICRI | GAGCTC | 1 cut(s) | 258 |
| EcoRII | CCWGG | 1 cut(s) | 330 |
| EcoRV | GATATC | 1 cut(s) | 298 |
| EcoT22I | ATGCAT | 1 cut(s) | 465 |
| EcoT38I | GRGCYC | 1 cut(s) | 260 |
| FaeI | CATG | 3 cut(s) | 264, 410, 467 |
| FaiI | YATR | 8 cut(s) | 262, 364, 366, 408, 465, 483, 494, 531 |
| FatI | CATG | 3 cut(s) | 260, 406, 463 |
| Fnu4HI | GCNGC | 4 cut(s) | 389, 392, 442, 534 |
| FriOI | GRGCYC | 1 cut(s) | 260 |
| Fsp4HI | GCNGC | 4 cut(s) | 389, 392, 442, 534 |
| GluI | GCNGC | 4 cut(s) | 389, 392, 442, 534 |
| Hin1II | CATG | 3 cut(s) | 264, 410, 467 |
| HindIII | AAGCTT | 1 cut(s) | 374 |
| HinfI | GANTC | 1 cut(s) | 69 |
| HphI | GGTGA | 2 cut(s) | 206, 509 |
| Hpy166II | GTNNAC | 1 cut(s) | 419 |
| Hpy188I | TCNGA | 3 cut(s) | 252, 270, 339 |
| Hpy188III | TCNNGA | 3 cut(s) | 224, 380, 518 |
| Hpy8I | GTNNAC | 1 cut(s) | 419 |
| HpyAV | CCTTC | 3 cut(s) | 340, 407, 461 |
| HpyCH4III | ACNGT | 1 cut(s) | 92 |
| HpyCH4V | TGCA | 4 cut(s) | 391, 463, 485, 533 |
| HpyF3I | CTNAG | 4 cut(s) | 54, 222, 251, 288 |
| Hsp92II | CATG | 3 cut(s) | 264, 410, 467 |
| Kzo9I | GATC | 3 cut(s) | 36, 226, 397 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| LpnPI | CCDG | 8 cut(s) | 86, 113, 171, 176, 209, 317, 344, 503 |
| Lsp1109I | GCAGC | 4 cut(s) | 375, 403, 428, 545 |
| LweI | GCATC | 1 cut(s) | 450 |
| MabI | ACCWGGT | 1 cut(s) | 330 |
| MaeIII | GTNAC | 1 cut(s) | 497 |
| MalI | GATC | 3 cut(s) | 38, 228, 399 |
| MboI | GATC | 3 cut(s) | 36, 226, 397 |
| MboII | GAAGA | 4 cut(s) | 27, 33, 148, 355 |
| MhlI | GDGCHC | 1 cut(s) | 260 |
| MluCI | AATT | 2 cut(s) | 352, 430 |
| MlyI | GAGTC | 1 cut(s) | 78 |
| Mph1103I | ATGCAT | 1 cut(s) | 465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 458 |
| MspA1I | CMGCKG | 1 cut(s) | 441 |
| MspR9I | CCNGG | 1 cut(s) | 332 |
| MvaI | CCWGG | 1 cut(s) | 332 |
| NdeII | GATC | 3 cut(s) | 36, 226, 397 |
| NlaIII | CATG | 3 cut(s) | 264, 410, 467 |
| NlaIV | GGNNCC | 2 cut(s) | 111, 161 |
| NmuCI | GTSAC | 1 cut(s) | 497 |
| NsiI | ATGCAT | 1 cut(s) | 465 |
| PkrI | GCNGC | 4 cut(s) | 390, 393, 443, 535 |
| PleI | GAGTC | 1 cut(s) | 77 |
| PpsI | GAGTC | 1 cut(s) | 77 |
| Psp124BI | GAGCTC | 1 cut(s) | 260 |
| Psp6I | CCWGG | 1 cut(s) | 330 |
| PspGI | CCWGG | 1 cut(s) | 330 |
| PspN4I | GGNNCC | 2 cut(s) | 111, 161 |
| PstI | CTGCAG | 1 cut(s) | 393 |
| PvuII | CAGCTG | 1 cut(s) | 441 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 458 |
| SacI | GAGCTC | 1 cut(s) | 260 |
| SatI | GCNGC | 4 cut(s) | 389, 392, 442, 534 |
| Sau3AI | GATC | 3 cut(s) | 36, 226, 397 |
| SchI | GAGTC | 1 cut(s) | 78 |
| ScrFI | CCNGG | 1 cut(s) | 332 |
| SduI | GDGCHC | 1 cut(s) | 260 |
| SexAI | ACCWGGT | 1 cut(s) | 330 |
| SfaNI | GCATC | 1 cut(s) | 450 |
| SfcI | CTRYAG | 3 cut(s) | 389, 436, 492 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 458 |
| SmlI | CTYRAG | 1 cut(s) | 97 |
| SmoI | CTYRAG | 1 cut(s) | 97 |
| Sse9I | AATT | 2 cut(s) | 352, 430 |
| SsiI | CCGC | 1 cut(s) | 301 |
| SstI | GAGCTC | 1 cut(s) | 260 |
| StyD4I | CCNGG | 1 cut(s) | 330 |
| TaaI | ACNGT | 1 cut(s) | 92 |
| TaqI | TCGA | 3 cut(s) | 30, 294, 309 |
| TasI | AATT | 2 cut(s) | 352, 430 |
| TatI | WGTACW | 1 cut(s) | 87 |
| TscAI | CASTG | 3 cut(s) | 58, 97, 292 |
| TseFI | GTSAC | 1 cut(s) | 497 |
| TseI | GCWGC | 4 cut(s) | 388, 391, 441, 533 |
| Tsp45I | GTSAC | 1 cut(s) | 497 |
| TspDTI | ATGAA | 2 cut(s) | 330, 480 |
| TspGWI | ACGGA | 1 cut(s) | 537 |
| TspRI | CASTG | 3 cut(s) | 58, 97, 292 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 413 |
| Zsp2I | ATGCAT | 1 cut(s) | 465 |