Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0004968

Physical Location & Seq

Genomic Coordinates Forward (+)

30822136 .. 30824731

Gene Structure 2596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG142000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGTACGTGGACAGTAGTGCTGCAGCTGCCTGCAACTTTGATCCCAGTACTAATAACCCCATGTCAGAATCAGCCCCAGAAGTTGTCCTCCACAGCCACAACAACACCACCACCACCTTTGCTCATGAAGAAAACTTGAGGAGGCTCTCCATGGAAGAAGAGCTCTCTAACTACCACCACAACGCCGCCATGGAAATTGAGCAGCAGCTTCAGAATGAGATCGATTTTGGCACCATGGACCAAAACACTACCCGCAACCCTCATTTGGTTAACCCCTTTGACACCCACCAAGCCACAAACTGGGACACTACTAATGAAATGCAACAACAATTGCCACAAGGCCCAACACCTGACCTACTCAGCCTTTTCCACTTGCCCTCCTCCTCTTCTGTGCTCCCACACTCCTCCATTAACTTCCCCCATCCCAAGACCCCGGGAGGCTGTTTCCCGGGGTCTTTCGGGTACGAGGCTCTGCCCGAGACTCCTTCTGGGGCGGCGGCCTCTTCGGTCATGTATGACCCAATGTTCCACCTGAACCAGCTGCCTCCTCAGCCGCAGCCGCCGCTGTTCAGGGAGCTGCTGCAGTCCCTGCCACATGGGTACAACTTGGGTGGGTCCAGAAATGGGTCGAGCTTGTTTAGCAATGGTGGGGATGAGGTGGACGATGGGAGTAGGCAGTTGTTTGAGAATGGGGTGCTGGAGTTTTCCAAGGAGATGAAGCCATTTGTAAGAGGAAGAGGTGGGAATAAAGGGACCAAGCACTTTGCTACTGAGCGCCAAAGGAGAGTCCAGCTCAATGACAAGTTTCATGCTCTGAGGGAATTGGTTCCAAACCCAACAAAGCCTGATCGAGCATCTGTAGTGGGAGATGCCATTGATTACATACAGGAGCTCAAGAGGACTGTGAGTGAGCTGAAACTGCTGGTGGAGAAGAAAAGGTGTGGGAGAGAGAGGAGCAAGAGGCACAAGACTGAGCAGGACATAGGTGCTGGAGACGATGATGAGAGCTGTAACATGAAGCCTCTTGGTGACCATGATCACGACCACTCCTACAACAATGGGTCTCTGAGGAGCTCATGGCTTCAAAGGAAGTCCAAAGACACCGAGGTCGACGTCCGGATCATTGATGATGAAGTCACCATCAAACTGGTCCAGAGGAAGAAGATCAATCTGTTGCTGTCTGTGTCCAAGCTTCTTGATGAGTTGCAGCTTGAACTTCATCATGCTGCTGGGGGACACATTGGGAATTCATACAGCTTCTTGTTCAACACCAAGATGTATGAAGGGTCTTCTTTGTATGCAAGTGCCATTGCCAACAAGCTCATTGAGACTCTGGATAGACAATATGCAGCAATTCCACCGACCAATAGTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0042545 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048518 GO:0048522 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

458

Amino Acids

51.24

Weight (kDa)

5.77

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	252 - 299	1.6e-12	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06170 AT1G06170 AT2G31210 AT2G31220 AT2G31220
fragaria_vesca	FvH4_7g02380 FvH4_7g07050
malus_domestica	MD02G1240400.v1.1 MD02G1240500.v1.1 MD07G1076400.v1.1 MD07G1076500.v1.1
prunus_persica	Prupe.2G097200_v2.0.a1 Prupe.2G097200_v2.0.a1 Prupe.2G097400_v2.0.a1
pyrus_communis	pycom02g20560 pycom02g20570 pycom07g06020
rosa_chinensis	RchiOBHm_Chr1g0337011
rosa_laevigata	RLG00000029312
rosa_multiflora	Rmu_co8055130.1_g000001 Rmu_sc0009742.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315050
rosa_rugosa	Rorug01G0130300 Rorug01G0130400 Rorug01G0130400
rosa_samantha	Rh1AG150800 Rh1BG119200 Rh1CG142000 Rh1DG158400
rosa_wichuraiana	Rw1G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1106
AatII	GACGTC	1 cut(s)	1116
AccB1I	GGYRCC	1 cut(s)	230
AccB7I	CCANNNNNTGG	1 cut(s)	300
AccI	GTMKAC	1 cut(s)	1110
AccIII	TCCGGA	1 cut(s)	1116
AciI	CCGC	7 cut(s)	186, 253, 494, 497, 554, 560, 563
AclWI	GGATC	2 cut(s)	35, 1127
AcsI	RAATTY	1 cut(s)	1246
AcuI	CTGAAG	1 cut(s)	194
AcyI	GRCGYC	1 cut(s)	1113
AfaI	GTAC	4 cut(s)	5, 49, 464, 602
AfiI	CCNNNNNNNGG	3 cut(s)	265, 300, 624
AgsI	TTSAA	3 cut(s)	1085, 1214, 1267
Alw21I	GWGCWC	4 cut(s)	165, 396, 894, 1076
Alw26I	GTCTC	4 cut(s)	473, 987, 1068, 1322
AlwI	GGATC	2 cut(s)	35, 1127
AlwNI	CAGNNNCTG	1 cut(s)	589
Ama87I	CYCGRG	3 cut(s)	433, 448, 476
Aor13HI	TCCGGA	1 cut(s)	1116
AoxI	GGCC	2 cut(s)	340, 498
ApoI	RAATTY	1 cut(s)	1246
Asp700I	GAANNNNTTC	1 cut(s)	825
AspLEI	GCGC	1 cut(s)	777
AspS9I	GGNCC	5 cut(s)	238, 341, 615, 753, 1150
AsuC2I	CCSGG	4 cut(s)	434, 435, 449, 450
AsuHPI	GGTGA	2 cut(s)	1040, 1129
AvaI	CYCGRG	3 cut(s)	433, 448, 476
AvaII	GGWCC	4 cut(s)	238, 615, 753, 1150
BanI	GGYRCC	1 cut(s)	230
BanII	GRGCYC	3 cut(s)	165, 894, 1076
BbsI	GAAGAC	1 cut(s)	1281
Bbv12I	GWGCWC	4 cut(s)	165, 396, 894, 1076
BbvCI	CCTCAGC	1 cut(s)	549
BccI	CCATC	3 cut(s)	429, 659, 1148
BclI	TGATCA	1 cut(s)	1036
BcnI	CCSGG	4 cut(s)	434, 435, 449, 450
BcoDI	GTCTC	4 cut(s)	473, 987, 1068, 1322
BfmI	CTRYAG	3 cut(s)	21, 581, 858
BfoI	RGCGCY	1 cut(s)	778
BmcAI	AGTACT	1 cut(s)	49
Bme1390I	CCNGG	4 cut(s)	434, 435, 449, 450
Bme18I	GGWCC	4 cut(s)	238, 615, 753, 1150
BmeT110I	CYCGRG	3 cut(s)	433, 448, 476
BmgT120I	GGNCC	5 cut(s)	238, 341, 615, 753, 1150
BmiI	GGNNCC	4 cut(s)	232, 616, 754, 828
BmrFI	CCNGG	4 cut(s)	434, 435, 449, 450
BmrI	ACTGGG	2 cut(s)	39, 310
BmsI	GCATC	2 cut(s)	859, 863
BmuI	ACTGGG	2 cut(s)	39, 310
BpiI	GAAGAC	1 cut(s)	1281
BplI	GAGNNNNNCTC	2 cut(s)	777, 809
BpmI	CTGGAG	2 cut(s)	719, 1011
Bpu10I	CCTNAGC	1 cut(s)	549
BpuEI	CTTGAG	2 cut(s)	157, 878
BpuMI	CCSGG	4 cut(s)	434, 435, 449, 450
Bsa29I	ATCGAT	1 cut(s)	222
BsaAI	YACGTR	1 cut(s)	7
BsaHI	GRCGYC	1 cut(s)	1113
BsaI	GGTCTC	1 cut(s)	1068
BsaJI	CCNNGG	9 cut(s)	150, 189, 234, 432, 433, 448, 449, 708, 1104
BsaWI	WCCGGW	1 cut(s)	1116
BsaXI	ACNNNNNCTCC	4 cut(s)	362, 392, 1031, 1061
Bsc4I	CCNNNNNNNGG	3 cut(s)	265, 300, 624
Bse1I	ACTGG	3 cut(s)	45, 305, 1152
Bse3DI	GCAATG	2 cut(s)	649, 1308
BseAI	TCCGGA	1 cut(s)	1116
BseCI	ATCGAT	1 cut(s)	222
BseDI	CCNNGG	9 cut(s)	150, 189, 234, 432, 433, 448, 449, 708, 1104
BseGI	GGATG	2 cut(s)	421, 658
BseLI	CCNNNNNNNGG	3 cut(s)	265, 300, 624
BseMI	GCAATG	2 cut(s)	649, 1308
BseMII	CTCAG	6 cut(s)	373, 563, 762, 806, 963, 1058
BseNI	ACTGG	3 cut(s)	45, 305, 1152
BseRI	GAGGAG	7 cut(s)	154, 370, 373, 394, 537, 967, 1084
BseYI	CCCAGC	1 cut(s)	1229
BshFI	GGCC	2 cut(s)	342, 500
BshNI	GGYRCC	1 cut(s)	230
BshVI	ATCGAT	1 cut(s)	222
BsiHKAI	GWGCWC	4 cut(s)	165, 396, 894, 1076
BsiHKCI	CYCGRG	3 cut(s)	433, 448, 476
BsiSI	CCGG	3 cut(s)	434, 449, 1117
BslFI	GGGAC	4 cut(s)	317, 571, 766, 1248
BslI	CCNNNNNNNGG	3 cut(s)	265, 300, 624
BsmAI	GTCTC	4 cut(s)	473, 987, 1068, 1322
BsmBI	CGTCTC	1 cut(s)	987
BsmFI	GGGAC	4 cut(s)	317, 571, 766, 1248
BsnI	GGCC	2 cut(s)	342, 500
Bso31I	GGTCTC	1 cut(s)	1068
BsoBI	CYCGRG	3 cut(s)	433, 448, 476
Bsp1286I	GDGCHC	4 cut(s)	165, 396, 894, 1076
Bsp13I	TCCGGA	1 cut(s)	1116
Bsp143I	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
Bsp19I	CCATGG	3 cut(s)	150, 189, 234
BspACI	CCGC	7 cut(s)	186, 253, 494, 497, 554, 560, 563
BspANI	GGCC	2 cut(s)	342, 500
BspCNI	CTCAG	6 cut(s)	372, 562, 763, 807, 964, 1059
BspDI	ATCGAT	1 cut(s)	222
BspEI	TCCGGA	1 cut(s)	1116
BspHI	TCATGA	1 cut(s)	124
BspLI	GGNNCC	4 cut(s)	232, 616, 754, 828
BspMAI	CTGCAG	2 cut(s)	25, 585
BspPI	GGATC	2 cut(s)	35, 1127
BspQI	GCTCTTC	1 cut(s)	153
BspT107I	GGYRCC	1 cut(s)	230
BspTNI	GGTCTC	1 cut(s)	1068
BsrDI	GCAATG	2 cut(s)	649, 1308
BsrI	ACTGG	3 cut(s)	45, 305, 1152
BssECI	CCNNGG	9 cut(s)	150, 189, 234, 432, 433, 448, 449, 708, 1104
BssMI	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
BssNI	GRCGYC	1 cut(s)	1113
BssT1I	CCWWGG	4 cut(s)	150, 189, 234, 708
Bst4CI	ACNGT	2 cut(s)	14, 904
Bst6I	CTCTTC	4 cut(s)	153, 391, 508, 730
BstACI	GRCGYC	1 cut(s)	1113
BstAPI	GCANNNNNTGC	1 cut(s)	589
BstBAI	YACGTR	1 cut(s)	7
BstC8I	GCNNGC	1 cut(s)	31
BstDEI	CTNAG	6 cut(s)	359, 549, 771, 815, 972, 1067
BstDSI	CCRYGG	3 cut(s)	150, 189, 234
BstEII	GGTNACC	1 cut(s)	1028
BstF5I	GGATG	2 cut(s)	421, 658
BstH2I	RGCGCY	1 cut(s)	778
BstHHI	GCGC	1 cut(s)	777
BstKTI	GATC	6 cut(s)	43, 222, 850, 1039, 1122, 1167
BstMAI	GTCTC	4 cut(s)	473, 987, 1068, 1322
BstMBI	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 550, 559, 562, 589, 639, 919
BstPI	GGTNACC	1 cut(s)	1028
BstSCI	CCNGG	4 cut(s)	432, 433, 447, 448
BstSFI	CTRYAG	3 cut(s)	21, 581, 858
BstV2I	GAAGAC	1 cut(s)	1281
BstXI	CCANNNNNNTGG	1 cut(s)	1147
Bsu15I	ATCGAT	1 cut(s)	222
BsuRI	GGCC	2 cut(s)	342, 500
BsuTUI	ATCGAT	1 cut(s)	222
BtgI	CCRYGG	3 cut(s)	150, 189, 234
BtsCI	GGATG	2 cut(s)	421, 658
Cac8I	GCNNGC	1 cut(s)	31
CaiI	CAGNNNCTG	1 cut(s)	589
CciI	TCATGA	1 cut(s)	124
CfoI	GCGC	1 cut(s)	777
Cfr13I	GGNCC	5 cut(s)	238, 341, 615, 753, 1150
Cfr9I	CCCGGG	2 cut(s)	433, 448
ClaI	ATCGAT	1 cut(s)	222
Csp6I	GTAC	4 cut(s)	4, 48, 463, 601
CspCI	CAANNNNNGTGG	4 cut(s)	100, 135, 592, 627
CviQI	GTAC	4 cut(s)	4, 48, 463, 601
DdeI	CTNAG	6 cut(s)	359, 549, 771, 815, 972, 1067
DpnI	GATC	6 cut(s)	42, 221, 849, 1038, 1121, 1166
DpnII	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
DrdI	GACNNNNNNGTC	1 cut(s)	1106
DseDI	GACNNNNNNGTC	1 cut(s)	1106
Eam1104I	CTCTTC	4 cut(s)	153, 391, 508, 730
EarI	CTCTTC	4 cut(s)	153, 391, 508, 730
Ecl136II	GAGCTC	3 cut(s)	163, 892, 1074
Eco130I	CCWWGG	4 cut(s)	150, 189, 234, 708
Eco24I	GRGCYC	3 cut(s)	165, 894, 1076
Eco31I	GGTCTC	1 cut(s)	1068
Eco47I	GGWCC	4 cut(s)	238, 615, 753, 1150
Eco53kI	GAGCTC	3 cut(s)	163, 892, 1074
Eco57I	CTGAAG	1 cut(s)	194
Eco88I	CYCGRG	3 cut(s)	433, 448, 476
Eco91I	GGTNACC	1 cut(s)	1028
EcoICRI	GAGCTC	3 cut(s)	163, 892, 1074
EcoO65I	GGTNACC	1 cut(s)	1028
EcoRI	GAATTC	1 cut(s)	1246
EcoT14I	CCWWGG	4 cut(s)	150, 189, 234, 708
EcoT38I	GRGCYC	3 cut(s)	165, 894, 1076
ErhI	CCWWGG	4 cut(s)	150, 189, 234, 708
Esp3I	CGTCTC	1 cut(s)	987
FaqI	GGGAC	4 cut(s)	317, 571, 766, 1248
FauI	CCCGC	1 cut(s)	260
FbaI	TGATCA	1 cut(s)	1036
FblI	GTMKAC	1 cut(s)	1110
FokI	GGATG	2 cut(s)	408, 665
FriOI	GRGCYC	3 cut(s)	165, 894, 1076
GlaI	GCGC	1 cut(s)	776
GsaI	CCCAGC	1 cut(s)	1233
GsuI	CTGGAG	2 cut(s)	719, 1011
HaeII	RGCGCY	1 cut(s)	778
HaeIII	GGCC	2 cut(s)	342, 500
HapII	CCGG	3 cut(s)	434, 449, 1117
HhaI	GCGC	1 cut(s)	777
Hin1I	GRCGYC	1 cut(s)	1113
Hin6I	GCGC	1 cut(s)	775
HinP1I	GCGC	1 cut(s)	775
HincII	GTYRAC	2 cut(s)	271, 1111
HindII	GTYRAC	2 cut(s)	271, 1111
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	4 cut(s)	68, 481, 786, 1330
HpaI	GTTAAC	1 cut(s)	271
HpaII	CCGG	3 cut(s)	434, 449, 1117
HphI	GGTGA	2 cut(s)	1040, 1129
Hpy166II	GTNNAC	4 cut(s)	10, 271, 661, 1111
Hpy188I	TCNGA	4 cut(s)	67, 213, 816, 1068
Hpy188III	TCNNGA	8 cut(s)	125, 618, 895, 1040, 1117, 1153, 1196, 1334
Hpy8I	GTNNAC	4 cut(s)	10, 271, 661, 1111
Hpy99I	CGWCG	1 cut(s)	1115
HpyAV	CCTTC	2 cut(s)	495, 1277
HpyCH4III	ACNGT	2 cut(s)	14, 904
HpyCH4IV	ACGT	2 cut(s)	6, 1113
HpyCH4V	TGCA	7 cut(s)	23, 33, 322, 583, 1207, 1301, 1349
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 550, 559, 562, 589, 639, 919
HpyF3I	CTNAG	6 cut(s)	359, 549, 771, 815, 972, 1067
HpySE526I	ACGT	2 cut(s)	6, 1113
Hsp92I	GRCGYC	1 cut(s)	1113
HspAI	GCGC	1 cut(s)	775
Kpn2I	TCCGGA	1 cut(s)	1116
Ksp22I	TGATCA	1 cut(s)	1036
KspAI	GTTAAC	1 cut(s)	271
Kzo9I	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
LguI	GCTCTTC	1 cut(s)	153
LmnI	GCTCC	5 cut(s)	399, 574, 889, 954, 1071
LweI	GCATC	2 cut(s)	859, 863
MaeII	ACGT	2 cut(s)	6, 1113
MaeIII	GTNAC	3 cut(s)	1010, 1028, 1135
MalI	GATC	6 cut(s)	42, 221, 849, 1038, 1121, 1166
MboI	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
MfeI	CAATTG	1 cut(s)	329
MhlI	GDGCHC	4 cut(s)	165, 396, 894, 1076
MluCI	AATT	5 cut(s)	195, 329, 821, 1246, 1353
MlyI	GAGTC	3 cut(s)	475, 795, 1324
MroI	TCCGGA	1 cut(s)	1116
MroXI	GAANNNNTTC	1 cut(s)	825
MseI	TTAA	2 cut(s)	270, 411
MslI	CAYNNNNRTG	1 cut(s)	1274
MspA1I	CMGCKG	3 cut(s)	26, 541, 565
MspI	CCGG	3 cut(s)	434, 449, 1117
MspR9I	CCNGG	4 cut(s)	434, 435, 449, 450
MunI	CAATTG	1 cut(s)	329
MwoI	GCNNNNNNNGC	7 cut(s)	26, 550, 559, 562, 589, 639, 919
NciI	CCSGG	4 cut(s)	434, 435, 449, 450
NcoI	CCATGG	3 cut(s)	150, 189, 234
NdeII	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
NlaIV	GGNNCC	4 cut(s)	232, 616, 754, 828
NmuCI	GTSAC	2 cut(s)	1028, 1135
PagI	TCATGA	1 cut(s)	124
PciSI	GCTCTTC	1 cut(s)	153
PdmI	GAANNNNTTC	1 cut(s)	825
PfeI	GAWTC	1 cut(s)	68
PflMI	CCANNNNNTGG	1 cut(s)	300
PleI	GAGTC	3 cut(s)	475, 794, 1324
PpsI	GAGTC	3 cut(s)	475, 794, 1324
Ppu21I	YACGTR	1 cut(s)	7
Psp124BI	GAGCTC	3 cut(s)	165, 894, 1076
PspEI	GGTNACC	1 cut(s)	1028
PspFI	CCCAGC	1 cut(s)	1229
PspN4I	GGNNCC	4 cut(s)	232, 616, 754, 828
PspPI	GGNCC	5 cut(s)	238, 341, 615, 753, 1150
PstI	CTGCAG	2 cut(s)	25, 585
PstNI	CAGNNNCTG	1 cut(s)	589
PvuII	CAGCTG	2 cut(s)	26, 541
RsaI	GTAC	4 cut(s)	5, 49, 464, 602
RsaNI	GTAC	4 cut(s)	4, 48, 463, 601
RseI	CAYNNNNRTG	1 cut(s)	1274
SacI	GAGCTC	3 cut(s)	165, 894, 1076
SalI	GTCGAC	1 cut(s)	1109
SapI	GCTCTTC	1 cut(s)	153
SaqAI	TTAA	2 cut(s)	270, 411
Sau3AI	GATC	6 cut(s)	40, 219, 847, 1036, 1119, 1164
Sau96I	GGNCC	5 cut(s)	238, 341, 615, 753, 1150
ScaI	AGTACT	1 cut(s)	49
SchI	GAGTC	3 cut(s)	475, 795, 1324
ScrFI	CCNGG	4 cut(s)	434, 435, 449, 450
SduI	GDGCHC	4 cut(s)	165, 396, 894, 1076
SfaNI	GCATC	2 cut(s)	859, 863
SfcI	CTRYAG	3 cut(s)	21, 581, 858
SinI	GGWCC	4 cut(s)	238, 615, 753, 1150
SmaI	CCCGGG	2 cut(s)	435, 450
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	2 cut(s)	136, 893
SmoI	CTYRAG	2 cut(s)	136, 893
Sse9I	AATT	5 cut(s)	195, 329, 821, 1246, 1353
SsiI	CCGC	7 cut(s)	186, 253, 494, 497, 554, 560, 563
SstI	GAGCTC	3 cut(s)	165, 894, 1076
StyD4I	CCNGG	4 cut(s)	432, 433, 447, 448
StyI	CCWWGG	4 cut(s)	150, 189, 234, 708
TaaI	ACNGT	2 cut(s)	14, 904
TaiI	ACGT	2 cut(s)	9, 1116
TaqI	TCGA	4 cut(s)	222, 629, 850, 1110
TaqII	GACCGA	1 cut(s)	496
TasI	AATT	5 cut(s)	195, 329, 821, 1246, 1353
TatI	WGTACW	1 cut(s)	47
TauI	GCSGC	6 cut(s)	188, 497, 500, 556, 562, 565
TfiI	GAWTC	1 cut(s)	68
Tru1I	TTAA	2 cut(s)	270, 411
Tru9I	TTAA	2 cut(s)	270, 411
TseFI	GTSAC	2 cut(s)	1028, 1135
Tsp45I	GTSAC	2 cut(s)	1028, 1135
TspDTI	ATGAA	9 cut(s)	141, 330, 731, 797, 1031, 1146, 1208, 1239, 1296
TspMI	CCCGGG	2 cut(s)	433, 448
Van91I	CCANNNNNTGG	1 cut(s)	300
VpaK11BI	GGWCC	4 cut(s)	238, 615, 753, 1150
XapI	RAATTY	1 cut(s)	1246
XmaI	CCCGGG	2 cut(s)	433, 448
XmiI	GTMKAC	1 cut(s)	1110
XmnI	GAANNNNTTC	1 cut(s)	825
ZraI	GACGTC	1 cut(s)	1114
ZrmI	AGTACT	1 cut(s)	49

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.