Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004968

Physical Location & Seq

Genomic Coordinates Reverse (-)

39230487 .. 39232999

Gene Structure 2513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00315050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGTACGTGGACAGTAGTGCTGCAGCTGCCTGCAACTTTGATCCCAATAATAACCCCATGTCAGAATCAGCCCCAGAAGTTGTCCTTCACAGCCACAACAGCACCACCACCGCCTTTGCTCATGAGGAAAACTTGAGGAGGCTGTCCATGGAAGAAGAGCTCTCTAATTACCACCACAACGCCGCCATGGAAATTGAGCAGCAGCTTCAGAATGAGATGGATTTTGGCACCATGGACCAAAACACTACCCCCAACCCTCATTTGGTTAACCCCTTTGACACCCACCAAGCCACAAACTGGGACACTACTAATGAAATGCAACAACAATTGCCACAAGGCCCTACACCTGACCTGCTCAGCCTTTTCCACTTGCCCTCCTCCTCTTCTGTGCTCCCACACTCCTCCATTAACTTCACCAACCCCAAGACTCCGGGAGGCTGTTTCCCGGGGTCTTTCGGGTATGAGGCTCTGCCCGAGACTCCGTCTGGGGCAGCTGCCTCTTCGGTCATGTATGACCCAATGTTCCACCTGAACCAGCTGCCTCCGCAGCCGCAGCCGCCGCTGTTCAGGGAGCTGCTGCAGTCCCTGCCACATGGATACAACTTGGGTGGGTCCAGAAATGGGTCGAGCTTGTTTAGCAATGGTGGGGATGAGGTGGACGATGGGAGTAGGCAGTTGTTTGAGAATGGGGTGCTGGAGTTTTCTAACGAGATGAAGCCATTTGGAAGAGGAAGAGGTGGGAATAAAGGGACCAAGCACTTTGCTACTGAGCGCCAAAGGAGAGTCCAGCTCAATGACAAGTTTCATGCTTTGAGGGAATTGGTTCCAAACCCAACGAAGCCTGATCGAGCATCTGTAGTGGGAGATGCCATTGATTACATACAGGAGCTCAAGAGGACTGTGAGTGAGCTGAAACTGCTGGTGGAGAAGAAAAGGTGTGGGAGAGAGAGGAGCAAGAGGCACAAGACTGAGCAGGACATAGGTGCTGGAGACGATGATGAGAGCTGTAACATGAAGCCTCTTGGTGACCATGATCATGACCACTCCTACAACAATGGGTCTCTGAGGAGCTCATGGCTTCAAAGGAAGTCCAAAGACACCGAGGTCGACGTCCGGATCATTGATGATGAAGTCACCATCAAACTGGTCCAGAGGAAGAAGATCAATCTGTTGCTGTCTGTGTCCAAGCTTCTTGATGAGTTGCAGCTTGAACTTCATCATGCTGCTGGGGGACACATTGGGAATTCATACAGCTTCTTGTTCAACACCAAGATGTATGAAGGGTCTTCTTTGTATGCAAGTGCCATTGCCAACAAGCTCATTGAGACTCTGGATAGACAATATGCAGCAATTCCACCTACCAATAGTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0042545 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048518 GO:0048522 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

457

Amino Acids

51.0

Weight (kDa)

5.6

Isoelectric Point (pI)

47.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	251 - 298	1.6e-12	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06170 AT1G06170 AT2G31210 AT2G31220 AT2G31220
fragaria_vesca	FvH4_7g02380 FvH4_7g07050
malus_domestica	MD02G1240400.v1.1 MD02G1240500.v1.1 MD07G1076400.v1.1 MD07G1076500.v1.1
prunus_persica	Prupe.2G097200_v2.0.a1 Prupe.2G097200_v2.0.a1 Prupe.2G097400_v2.0.a1
pyrus_communis	pycom02g20560 pycom02g20570 pycom07g06020
rosa_chinensis	RchiOBHm_Chr1g0337011
rosa_laevigata	RLG00000029312
rosa_multiflora	Rmu_co8055130.1_g000001 Rmu_sc0009742.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315050
rosa_rugosa	Rorug01G0130300 Rorug01G0130400 Rorug01G0130400
rosa_samantha	Rh1AG150800 Rh1BG119200 Rh1CG142000 Rh1DG158400
rosa_wichuraiana	Rw1G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1103
AatII	GACGTC	1 cut(s)	1113
Acc36I	ACCTGC	1 cut(s)	360
AccB1I	GGYRCC	1 cut(s)	227
AccB7I	CCANNNNNTGG	1 cut(s)	297
AccI	GTMKAC	1 cut(s)	1107
AccIII	TCCGGA	1 cut(s)	1113
AciI	CCGC	6 cut(s)	111, 183, 545, 551, 557, 560
AclWI	GGATC	2 cut(s)	35, 1124
AcsI	RAATTY	1 cut(s)	1243
AcuI	CTGAAG	1 cut(s)	191
AcyI	GRCGYC	1 cut(s)	1110
AfaI	GTAC	1 cut(s)	5
AfiI	CCNNNNNNNGG	3 cut(s)	262, 297, 621
AgsI	TTSAA	3 cut(s)	1082, 1211, 1264
Alw21I	GWGCWC	4 cut(s)	162, 393, 891, 1073
Alw26I	GTCTC	4 cut(s)	470, 984, 1065, 1319
AlwI	GGATC	2 cut(s)	35, 1124
AlwNI	CAGNNNCTG	1 cut(s)	586
Ama87I	CYCGRG	2 cut(s)	445, 473
Aor13HI	TCCGGA	1 cut(s)	1113
AoxI	GGCC	1 cut(s)	337
ApoI	RAATTY	1 cut(s)	1243
Asp700I	GAANNNNTTC	1 cut(s)	822
AspLEI	GCGC	1 cut(s)	774
AspS9I	GGNCC	5 cut(s)	235, 338, 612, 750, 1147
AsuC2I	CCSGG	3 cut(s)	432, 446, 447
AsuHPI	GGTGA	3 cut(s)	406, 1037, 1126
AvaI	CYCGRG	2 cut(s)	445, 473
AvaII	GGWCC	4 cut(s)	235, 612, 750, 1147
BanI	GGYRCC	1 cut(s)	227
BanII	GRGCYC	3 cut(s)	162, 891, 1073
BbsI	GAAGAC	1 cut(s)	1278
Bbv12I	GWGCWC	4 cut(s)	162, 393, 891, 1073
BccI	CCATC	3 cut(s)	211, 656, 1145
BciVI	GTATCC	1 cut(s)	590
BclI	TGATCA	1 cut(s)	1033
BcnI	CCSGG	3 cut(s)	432, 446, 447
BcoDI	GTCTC	4 cut(s)	470, 984, 1065, 1319
BfmI	CTRYAG	3 cut(s)	21, 578, 855
BfoI	RGCGCY	1 cut(s)	775
BfuAI	ACCTGC	1 cut(s)	360
BfuI	GTATCC	1 cut(s)	590
BlpI	GCTNAGC	1 cut(s)	356
Bme1390I	CCNGG	3 cut(s)	432, 446, 447
Bme18I	GGWCC	4 cut(s)	235, 612, 750, 1147
BmeT110I	CYCGRG	2 cut(s)	445, 473
BmgT120I	GGNCC	5 cut(s)	235, 338, 612, 750, 1147
BmiI	GGNNCC	4 cut(s)	229, 613, 751, 825
BmrFI	CCNGG	3 cut(s)	432, 446, 447
BmrI	ACTGGG	1 cut(s)	307
BmsI	GCATC	2 cut(s)	856, 860
BmuI	ACTGGG	1 cut(s)	307
BpiI	GAAGAC	1 cut(s)	1278
BplI	GAGNNNNNCTC	2 cut(s)	774, 806
BpmI	CTGGAG	2 cut(s)	716, 1008
Bpu1102I	GCTNAGC	1 cut(s)	356
BpuEI	CTTGAG	2 cut(s)	154, 875
BpuMI	CCSGG	3 cut(s)	432, 446, 447
BsaAI	YACGTR	1 cut(s)	7
BsaHI	GRCGYC	1 cut(s)	1110
BsaI	GGTCTC	1 cut(s)	1065
BsaJI	CCNNGG	6 cut(s)	147, 186, 231, 445, 446, 1101
BsaWI	WCCGGW	1 cut(s)	1113
BsaXI	ACNNNNNCTCC	2 cut(s)	359, 389
Bsc4I	CCNNNNNNNGG	3 cut(s)	262, 297, 621
Bse1I	ACTGG	2 cut(s)	302, 1149
Bse3DI	GCAATG	2 cut(s)	646, 1305
BseAI	TCCGGA	1 cut(s)	1113
BseDI	CCNNGG	6 cut(s)	147, 186, 231, 445, 446, 1101
BseGI	GGATG	1 cut(s)	655
BseLI	CCNNNNNNNGG	3 cut(s)	262, 297, 621
BseMI	GCAATG	2 cut(s)	646, 1305
BseMII	CTCAG	4 cut(s)	370, 759, 960, 1055
BseNI	ACTGG	2 cut(s)	302, 1149
BseRI	GAGGAG	6 cut(s)	151, 367, 370, 391, 964, 1081
BseYI	CCCAGC	1 cut(s)	1226
BshFI	GGCC	1 cut(s)	339
BshNI	GGYRCC	1 cut(s)	227
BsiHKAI	GWGCWC	4 cut(s)	162, 393, 891, 1073
BsiHKCI	CYCGRG	2 cut(s)	445, 473
BsiSI	CCGG	3 cut(s)	431, 446, 1114
BslFI	GGGAC	4 cut(s)	314, 568, 763, 1245
BslI	CCNNNNNNNGG	3 cut(s)	262, 297, 621
BsmAI	GTCTC	4 cut(s)	470, 984, 1065, 1319
BsmBI	CGTCTC	1 cut(s)	984
BsmFI	GGGAC	4 cut(s)	314, 568, 763, 1245
BsnI	GGCC	1 cut(s)	339
Bso31I	GGTCTC	1 cut(s)	1065
BsoBI	CYCGRG	2 cut(s)	445, 473
Bsp1286I	GDGCHC	4 cut(s)	162, 393, 891, 1073
Bsp13I	TCCGGA	1 cut(s)	1113
Bsp143I	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
Bsp1720I	GCTNAGC	1 cut(s)	356
Bsp19I	CCATGG	3 cut(s)	147, 186, 231
BspACI	CCGC	6 cut(s)	111, 183, 545, 551, 557, 560
BspANI	GGCC	1 cut(s)	339
BspCNI	CTCAG	4 cut(s)	369, 760, 961, 1056
BspEI	TCCGGA	1 cut(s)	1113
BspHI	TCATGA	2 cut(s)	121, 1036
BspLI	GGNNCC	4 cut(s)	229, 613, 751, 825
BspMAI	CTGCAG	2 cut(s)	25, 582
BspMI	ACCTGC	1 cut(s)	360
BspPI	GGATC	2 cut(s)	35, 1124
BspQI	GCTCTTC	1 cut(s)	150
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	1 cut(s)	1065
BsrDI	GCAATG	2 cut(s)	646, 1305
BsrI	ACTGG	2 cut(s)	302, 1149
BssECI	CCNNGG	6 cut(s)	147, 186, 231, 445, 446, 1101
BssMI	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
BssNI	GRCGYC	1 cut(s)	1110
BssT1I	CCWWGG	3 cut(s)	147, 186, 231
Bst4CI	ACNGT	2 cut(s)	14, 901
Bst6I	CTCTTC	5 cut(s)	150, 388, 505, 721, 727
BstACI	GRCGYC	1 cut(s)	1110
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstBAI	YACGTR	1 cut(s)	7
BstC8I	GCNNGC	1 cut(s)	31
BstDEI	CTNAG	4 cut(s)	356, 768, 969, 1064
BstDSI	CCRYGG	3 cut(s)	147, 186, 231
BstEII	GGTNACC	1 cut(s)	1025
BstF5I	GGATG	1 cut(s)	655
BstH2I	RGCGCY	1 cut(s)	775
BstHHI	GCGC	1 cut(s)	774
BstKTI	GATC	5 cut(s)	43, 847, 1036, 1119, 1164
BstMAI	GTCTC	4 cut(s)	470, 984, 1065, 1319
BstMBI	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
BstPI	GGTNACC	1 cut(s)	1025
BstSCI	CCNGG	3 cut(s)	430, 444, 445
BstSFI	CTRYAG	3 cut(s)	21, 578, 855
BstV2I	GAAGAC	1 cut(s)	1278
BstXI	CCANNNNNNTGG	1 cut(s)	1144
BsuI	GTATCC	1 cut(s)	590
BsuRI	GGCC	1 cut(s)	339
BtgI	CCRYGG	3 cut(s)	147, 186, 231
BtsCI	GGATG	1 cut(s)	655
BveI	ACCTGC	1 cut(s)	360
Cac8I	GCNNGC	1 cut(s)	31
CaiI	CAGNNNCTG	1 cut(s)	586
CciI	TCATGA	2 cut(s)	121, 1036
CfoI	GCGC	1 cut(s)	774
Cfr13I	GGNCC	5 cut(s)	235, 338, 612, 750, 1147
Cfr9I	CCCGGG	1 cut(s)	445
Csp6I	GTAC	1 cut(s)	4
CspCI	CAANNNNNGTGG	4 cut(s)	97, 132, 589, 624
CviQI	GTAC	1 cut(s)	4
DdeI	CTNAG	4 cut(s)	356, 768, 969, 1064
DpnI	GATC	5 cut(s)	42, 846, 1035, 1118, 1163
DpnII	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
DrdI	GACNNNNNNGTC	1 cut(s)	1103
DseDI	GACNNNNNNGTC	1 cut(s)	1103
Eam1104I	CTCTTC	5 cut(s)	150, 388, 505, 721, 727
EarI	CTCTTC	5 cut(s)	150, 388, 505, 721, 727
Ecl136II	GAGCTC	3 cut(s)	160, 889, 1071
Eco130I	CCWWGG	3 cut(s)	147, 186, 231
Eco24I	GRGCYC	3 cut(s)	162, 891, 1073
Eco31I	GGTCTC	1 cut(s)	1065
Eco47I	GGWCC	4 cut(s)	235, 612, 750, 1147
Eco53kI	GAGCTC	3 cut(s)	160, 889, 1071
Eco57I	CTGAAG	1 cut(s)	191
Eco88I	CYCGRG	2 cut(s)	445, 473
Eco91I	GGTNACC	1 cut(s)	1025
EcoICRI	GAGCTC	3 cut(s)	160, 889, 1071
EcoO109I	RGGNCCY	1 cut(s)	338
EcoO65I	GGTNACC	1 cut(s)	1025
EcoRI	GAATTC	1 cut(s)	1243
EcoT14I	CCWWGG	3 cut(s)	147, 186, 231
EcoT38I	GRGCYC	3 cut(s)	162, 891, 1073
ErhI	CCWWGG	3 cut(s)	147, 186, 231
Esp3I	CGTCTC	1 cut(s)	984
FalI	AAGNNNNNCTT	2 cut(s)	69, 101
FaqI	GGGAC	4 cut(s)	314, 568, 763, 1245
FbaI	TGATCA	1 cut(s)	1033
FblI	GTMKAC	1 cut(s)	1107
FokI	GGATG	1 cut(s)	662
FriOI	GRGCYC	3 cut(s)	162, 891, 1073
GlaI	GCGC	1 cut(s)	773
GsaI	CCCAGC	1 cut(s)	1230
GsuI	CTGGAG	2 cut(s)	716, 1008
HaeII	RGCGCY	1 cut(s)	775
HaeIII	GGCC	1 cut(s)	339
HapII	CCGG	3 cut(s)	431, 446, 1114
HhaI	GCGC	1 cut(s)	774
Hin1I	GRCGYC	1 cut(s)	1110
Hin6I	GCGC	1 cut(s)	772
HinP1I	GCGC	1 cut(s)	772
HincII	GTYRAC	2 cut(s)	268, 1108
HindII	GTYRAC	2 cut(s)	268, 1108
HindIII	AAGCTT	1 cut(s)	1187
HinfI	GANTC	5 cut(s)	65, 427, 478, 783, 1327
HpaI	GTTAAC	1 cut(s)	268
HpaII	CCGG	3 cut(s)	431, 446, 1114
HphI	GGTGA	3 cut(s)	406, 1037, 1126
Hpy166II	GTNNAC	4 cut(s)	10, 268, 658, 1108
Hpy188I	TCNGA	3 cut(s)	64, 210, 1065
Hpy188III	TCNNGA	8 cut(s)	122, 615, 892, 1037, 1114, 1150, 1193, 1331
Hpy8I	GTNNAC	4 cut(s)	10, 268, 658, 1108
Hpy99I	CGWCG	1 cut(s)	1112
HpyAV	CCTTC	2 cut(s)	95, 1274
HpyCH4III	ACNGT	2 cut(s)	14, 901
HpyCH4IV	ACGT	2 cut(s)	6, 1110
HpyCH4V	TGCA	7 cut(s)	23, 33, 319, 580, 1204, 1298, 1346
HpyF3I	CTNAG	4 cut(s)	356, 768, 969, 1064
HpySE526I	ACGT	2 cut(s)	6, 1110
Hsp92I	GRCGYC	1 cut(s)	1110
HspAI	GCGC	1 cut(s)	772
Kpn2I	TCCGGA	1 cut(s)	1113
Ksp22I	TGATCA	1 cut(s)	1033
KspAI	GTTAAC	1 cut(s)	268
Kzo9I	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
LguI	GCTCTTC	1 cut(s)	150
LmnI	GCTCC	5 cut(s)	396, 571, 886, 951, 1068
LweI	GCATC	2 cut(s)	856, 860
MaeII	ACGT	2 cut(s)	6, 1110
MaeIII	GTNAC	3 cut(s)	1007, 1025, 1132
MalI	GATC	5 cut(s)	42, 846, 1035, 1118, 1163
MboI	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
MfeI	CAATTG	1 cut(s)	326
MhlI	GDGCHC	4 cut(s)	162, 393, 891, 1073
MluCI	AATT	6 cut(s)	166, 192, 326, 818, 1243, 1350
MlyI	GAGTC	4 cut(s)	421, 472, 792, 1321
MroI	TCCGGA	1 cut(s)	1113
MroXI	GAANNNNTTC	1 cut(s)	822
MseI	TTAA	2 cut(s)	267, 408
MslI	CAYNNNNRTG	2 cut(s)	1035, 1271
MspA1I	CMGCKG	4 cut(s)	26, 494, 538, 562
MspI	CCGG	3 cut(s)	431, 446, 1114
MspR9I	CCNGG	3 cut(s)	432, 446, 447
MunI	CAATTG	1 cut(s)	326
NciI	CCSGG	3 cut(s)	432, 446, 447
NcoI	CCATGG	3 cut(s)	147, 186, 231
NdeII	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
NlaIV	GGNNCC	4 cut(s)	229, 613, 751, 825
NmuCI	GTSAC	2 cut(s)	1025, 1132
PagI	TCATGA	2 cut(s)	121, 1036
PciSI	GCTCTTC	1 cut(s)	150
PdmI	GAANNNNTTC	1 cut(s)	822
PfeI	GAWTC	1 cut(s)	65
PflFI	GACNNNGTC	1 cut(s)	481
PflMI	CCANNNNNTGG	1 cut(s)	297
PfoI	TCCNGGA	1 cut(s)	430
PleI	GAGTC	4 cut(s)	421, 472, 791, 1321
PpsI	GAGTC	4 cut(s)	421, 472, 791, 1321
Ppu21I	YACGTR	1 cut(s)	7
Psp124BI	GAGCTC	3 cut(s)	162, 891, 1073
PspEI	GGTNACC	1 cut(s)	1025
PspFI	CCCAGC	1 cut(s)	1226
PspN4I	GGNNCC	4 cut(s)	229, 613, 751, 825
PspPI	GGNCC	5 cut(s)	235, 338, 612, 750, 1147
PstI	CTGCAG	2 cut(s)	25, 582
PstNI	CAGNNNCTG	1 cut(s)	586
PsyI	GACNNNGTC	1 cut(s)	481
PvuII	CAGCTG	3 cut(s)	26, 494, 538
RsaI	GTAC	1 cut(s)	5
RsaNI	GTAC	1 cut(s)	4
RseI	CAYNNNNRTG	2 cut(s)	1035, 1271
SacI	GAGCTC	3 cut(s)	162, 891, 1073
SalI	GTCGAC	1 cut(s)	1106
SapI	GCTCTTC	1 cut(s)	150
SaqAI	TTAA	2 cut(s)	267, 408
Sau3AI	GATC	5 cut(s)	40, 844, 1033, 1116, 1161
Sau96I	GGNCC	5 cut(s)	235, 338, 612, 750, 1147
SchI	GAGTC	4 cut(s)	421, 472, 792, 1321
ScrFI	CCNGG	3 cut(s)	432, 446, 447
SduI	GDGCHC	4 cut(s)	162, 393, 891, 1073
SfaNI	GCATC	2 cut(s)	856, 860
SfcI	CTRYAG	3 cut(s)	21, 578, 855
SinI	GGWCC	4 cut(s)	235, 612, 750, 1147
SmaI	CCCGGG	1 cut(s)	447
SmiMI	CAYNNNNRTG	2 cut(s)	1035, 1271
SmlI	CTYRAG	2 cut(s)	133, 890
SmoI	CTYRAG	2 cut(s)	133, 890
Sse9I	AATT	6 cut(s)	166, 192, 326, 818, 1243, 1350
SsiI	CCGC	6 cut(s)	111, 183, 545, 551, 557, 560
SstI	GAGCTC	3 cut(s)	162, 891, 1073
StyD4I	CCNGG	3 cut(s)	430, 444, 445
StyI	CCWWGG	3 cut(s)	147, 186, 231
TaaI	ACNGT	2 cut(s)	14, 901
TaiI	ACGT	2 cut(s)	9, 1113
TaqI	TCGA	3 cut(s)	626, 847, 1107
TaqII	GACCGA	1 cut(s)	493
TasI	AATT	6 cut(s)	166, 192, 326, 818, 1243, 1350
TauI	GCSGC	4 cut(s)	185, 553, 559, 562
TfiI	GAWTC	1 cut(s)	65
Tru1I	TTAA	2 cut(s)	267, 408
Tru9I	TTAA	2 cut(s)	267, 408
TseFI	GTSAC	2 cut(s)	1025, 1132
Tsp45I	GTSAC	2 cut(s)	1025, 1132
TspDTI	ATGAA	8 cut(s)	327, 728, 794, 1028, 1143, 1205, 1236, 1293
TspGWI	ACGGA	1 cut(s)	471
TspMI	CCCGGG	1 cut(s)	445
Tth111I	GACNNNGTC	1 cut(s)	481
Van91I	CCANNNNNTGG	1 cut(s)	297
VpaK11BI	GGWCC	4 cut(s)	235, 612, 750, 1147
XapI	RAATTY	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	259
XmaI	CCCGGG	1 cut(s)	445
XmiI	GTMKAC	1 cut(s)	1107
XmnI	GAANNNNTTC	1 cut(s)	822
ZraI	GACGTC	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.