Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004968

Physical Location & Seq

Genomic Coordinates Forward (+)

27551660 .. 27554317

Gene Structure 2658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G012340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGTACGTGGACAGTACTGGTGCTGCAGCTGCCTGCAACTTTGATCCCAGTACTAATAACCCCATGTCAGAATCAGCCCCAGAAGTTGTCCTCCACAGCCACAACACCACCACCACCACCTTTGCTCATGAAGAAAACTTGAGGAGGCTCTCCATGGAAGAAGAGCTCTCTAACTACCACCACAACGCCGCCATGGAAATTGAGCAGCAGTTTCAGAATGAGATGGATTTTGGCACCATGGACCAAAACACTACCCCCAACCCTCATTTGGTTAATCCCTTTGACACCCACCAAGCCACAGACTGGGACACTACTAATGAAATGCAACAACAATTGCCACAAGGCCCTACACCTGACCTGCTCAGCCTTTTCCACTTGCCCTCCTCCTCTTCTGTGCTCCCACACTCCTCCATTAACTTCCCCCATCCCAAGACCCCGGGAGGCTGTTTCCCGGGGTCTTTCGGGTATGAGGCTCTGCCCGAGACTCCTCCTGGGGCGGCGGCCTCTTCGGTCATGTATGACCCAATGTTCCACCTGAACCAGCTGCCTCCTCAGCCGCAGCCGCCGCTGTTCAGGGAGCTGCTGCAGTCCCTGCCACATGGGTACAACTTGGGTGGGTCCAGAAATGGGTCGAGCTTGTTTAGCAATGGTGGGGATGAGGTGGACGATGGGAGTAGGCAGTTGTTTGAGAATGGGGTGCTGGAGTTTTCCAAGGAGATGAAGCCATTTGGAAGAGGAAGAGGTGGGAATAAAGGGACCAAACACTTTGCTACTGAGCGCCAAAGGAGAGTCCAGCTCAATGACAAGTTTCATGCTCTGAGGGAATTGGTTCCAAACCCAACAAAGCCTGATCGAGCATCTGTAGTGGGAGATGCCATTGATTACATACAGGAGCTCAAGAGGACTGTGAGTGAGCTGAAACTGCTGGTGGAGAAGAAAAGGTGTGGGAGAGAGAGGAGCAAGAGGCACAAGACTGAGCAGGACATAGGTGCTGGAGACGATGATGAGAGCTGTAACATGAAGCCTCTTGGTGACCATGATCATGACCACTCCTACAACAATGGGTCTCTGAGGAGCTCATGGCTTCAAAGGAAGTCCAAAGACACCGAGGTCGACGTCCGGATCATTGATGATGAAGTCACCATCAAACTGGTCCAGAGGAAGAAGATCAATCTGTTGCTGTCTGTGTCCAAGCTTCTTGATGAGTTGCAGCTTGAACTTCATCATGCTGCTGGGGGACACATTGGGAATTCATACAGCTTCTTGTTCAACACCAAGATGTATGAAGGGTCTTCTTTGTATGCAAGTGCCATTGCCAACAAGCTCATTGAGACTCTGGATAGACAATATGCAGCAATTCCACCTACCAATAGTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0042545 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048518 GO:0048522 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

459

Amino Acids

51.26

Weight (kDa)

5.64

Isoelectric Point (pI)

47.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	253 - 300	1.7e-12	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06170 AT1G06170 AT2G31210 AT2G31220 AT2G31220
fragaria_vesca	FvH4_7g02380 FvH4_7g07050
malus_domestica	MD02G1240400.v1.1 MD02G1240500.v1.1 MD07G1076400.v1.1 MD07G1076500.v1.1
prunus_persica	Prupe.2G097200_v2.0.a1 Prupe.2G097200_v2.0.a1 Prupe.2G097400_v2.0.a1
pyrus_communis	pycom02g20560 pycom02g20570 pycom07g06020
rosa_chinensis	RchiOBHm_Chr1g0337011
rosa_laevigata	RLG00000029312
rosa_multiflora	Rmu_co8055130.1_g000001 Rmu_sc0009742.1_g000007
rosa_roxburghii	Rroxscaffold_4G00315050
rosa_rugosa	Rorug01G0130300 Rorug01G0130400 Rorug01G0130400
rosa_samantha	Rh1AG150800 Rh1BG119200 Rh1CG142000 Rh1DG158400
rosa_wichuraiana	Rw1G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1109
AatII	GACGTC	1 cut(s)	1119
Acc36I	ACCTGC	1 cut(s)	366
AccB1I	GGYRCC	1 cut(s)	233
AccB7I	CCANNNNNTGG	1 cut(s)	303
AccI	GTMKAC	1 cut(s)	1113
AccIII	TCCGGA	1 cut(s)	1119
AciI	CCGC	6 cut(s)	189, 497, 500, 557, 563, 566
AclWI	GGATC	2 cut(s)	38, 1130
AcsI	RAATTY	1 cut(s)	1249
AcyI	GRCGYC	1 cut(s)	1116
AfaI	GTAC	4 cut(s)	5, 16, 52, 605
AfiI	CCNNNNNNNGG	3 cut(s)	268, 303, 627
AgsI	TTSAA	3 cut(s)	1088, 1217, 1270
AjnI	CCWGG	1 cut(s)	490
Alw21I	GWGCWC	4 cut(s)	168, 399, 897, 1079
Alw26I	GTCTC	4 cut(s)	476, 990, 1071, 1325
AlwI	GGATC	2 cut(s)	38, 1130
AlwNI	CAGNNNCTG	1 cut(s)	592
Ama87I	CYCGRG	3 cut(s)	436, 451, 479
Aor13HI	TCCGGA	1 cut(s)	1119
AoxI	GGCC	2 cut(s)	343, 501
ApoI	RAATTY	1 cut(s)	1249
Asp700I	GAANNNNTTC	1 cut(s)	828
AspLEI	GCGC	1 cut(s)	780
AspS9I	GGNCC	5 cut(s)	241, 344, 618, 756, 1153
AsuC2I	CCSGG	4 cut(s)	437, 438, 452, 453
AsuHPI	GGTGA	2 cut(s)	1043, 1132
AvaI	CYCGRG	3 cut(s)	436, 451, 479
AvaII	GGWCC	4 cut(s)	241, 618, 756, 1153
BanI	GGYRCC	1 cut(s)	233
BanII	GRGCYC	3 cut(s)	168, 897, 1079
BbsI	GAAGAC	1 cut(s)	1284
Bbv12I	GWGCWC	4 cut(s)	168, 399, 897, 1079
BbvCI	CCTCAGC	1 cut(s)	552
BccI	CCATC	4 cut(s)	217, 432, 662, 1151
BciT130I	CCWGG	1 cut(s)	492
BclI	TGATCA	1 cut(s)	1039
BcnI	CCSGG	4 cut(s)	437, 438, 452, 453
BcoDI	GTCTC	4 cut(s)	476, 990, 1071, 1325
BfmI	CTRYAG	3 cut(s)	24, 584, 861
BfoI	RGCGCY	1 cut(s)	781
BfuAI	ACCTGC	1 cut(s)	366
BlpI	GCTNAGC	1 cut(s)	362
BmcAI	AGTACT	2 cut(s)	16, 52
Bme1390I	CCNGG	5 cut(s)	437, 438, 452, 453, 492
Bme18I	GGWCC	4 cut(s)	241, 618, 756, 1153
BmeT110I	CYCGRG	3 cut(s)	436, 451, 479
BmgT120I	GGNCC	5 cut(s)	241, 344, 618, 756, 1153
BmiI	GGNNCC	4 cut(s)	235, 619, 757, 831
BmrFI	CCNGG	5 cut(s)	437, 438, 452, 453, 492
BmrI	ACTGGG	2 cut(s)	42, 313
BmsI	GCATC	2 cut(s)	862, 866
BmuI	ACTGGG	2 cut(s)	42, 313
BpiI	GAAGAC	1 cut(s)	1284
BplI	GAGNNNNNCTC	2 cut(s)	780, 812
BpmI	CTGGAG	2 cut(s)	722, 1014
Bpu10I	CCTNAGC	1 cut(s)	552
Bpu1102I	GCTNAGC	1 cut(s)	362
BpuEI	CTTGAG	2 cut(s)	160, 881
BpuMI	CCSGG	4 cut(s)	437, 438, 452, 453
BsaAI	YACGTR	1 cut(s)	7
BsaHI	GRCGYC	1 cut(s)	1116
BsaI	GGTCTC	1 cut(s)	1071
BsaWI	WCCGGW	1 cut(s)	1119
BsaXI	ACNNNNNCTCC	2 cut(s)	365, 395
Bsc4I	CCNNNNNNNGG	3 cut(s)	268, 303, 627
Bse1I	ACTGG	4 cut(s)	22, 48, 308, 1155
Bse3DI	GCAATG	2 cut(s)	652, 1311
BseAI	TCCGGA	1 cut(s)	1119
BseBI	CCWGG	1 cut(s)	492
BseGI	GGATG	2 cut(s)	424, 661
BseLI	CCNNNNNNNGG	3 cut(s)	268, 303, 627
BseMI	GCAATG	2 cut(s)	652, 1311
BseMII	CTCAG	6 cut(s)	376, 566, 765, 809, 966, 1061
BseNI	ACTGG	4 cut(s)	22, 48, 308, 1155
BseRI	GAGGAG	8 cut(s)	157, 373, 376, 397, 477, 540, 970, 1087
BseYI	CCCAGC	1 cut(s)	1232
BshFI	GGCC	2 cut(s)	345, 503
BshNI	GGYRCC	1 cut(s)	233
BsiHKAI	GWGCWC	4 cut(s)	168, 399, 897, 1079
BsiHKCI	CYCGRG	3 cut(s)	436, 451, 479
BsiSI	CCGG	3 cut(s)	437, 452, 1120
BslFI	GGGAC	4 cut(s)	320, 574, 769, 1251
BslI	CCNNNNNNNGG	3 cut(s)	268, 303, 627
BsmAI	GTCTC	4 cut(s)	476, 990, 1071, 1325
BsmBI	CGTCTC	1 cut(s)	990
BsmFI	GGGAC	4 cut(s)	320, 574, 769, 1251
BsnI	GGCC	2 cut(s)	345, 503
Bso31I	GGTCTC	1 cut(s)	1071
BsoBI	CYCGRG	3 cut(s)	436, 451, 479
Bsp1286I	GDGCHC	4 cut(s)	168, 399, 897, 1079
Bsp13I	TCCGGA	1 cut(s)	1119
Bsp143I	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
Bsp1720I	GCTNAGC	1 cut(s)	362
Bsp19I	CCATGG	3 cut(s)	153, 192, 237
BspACI	CCGC	6 cut(s)	189, 497, 500, 557, 563, 566
BspANI	GGCC	2 cut(s)	345, 503
BspCNI	CTCAG	6 cut(s)	375, 565, 766, 810, 967, 1062
BspEI	TCCGGA	1 cut(s)	1119
BspHI	TCATGA	2 cut(s)	127, 1042
BspLI	GGNNCC	4 cut(s)	235, 619, 757, 831
BspMAI	CTGCAG	2 cut(s)	28, 588
BspMI	ACCTGC	1 cut(s)	366
BspPI	GGATC	2 cut(s)	38, 1130
BspQI	GCTCTTC	1 cut(s)	156
BspT107I	GGYRCC	1 cut(s)	233
BspTNI	GGTCTC	1 cut(s)	1071
BsrDI	GCAATG	2 cut(s)	652, 1311
BsrI	ACTGG	4 cut(s)	22, 48, 308, 1155
BssMI	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
BssNI	GRCGYC	1 cut(s)	1116
BssT1I	CCWWGG	4 cut(s)	153, 192, 237, 711
Bst2UI	CCWGG	1 cut(s)	492
Bst4CI	ACNGT	2 cut(s)	14, 907
Bst6I	CTCTTC	5 cut(s)	156, 394, 511, 727, 733
BstACI	GRCGYC	1 cut(s)	1116
BstAPI	GCANNNNNTGC	1 cut(s)	592
BstBAI	YACGTR	1 cut(s)	7
BstC8I	GCNNGC	1 cut(s)	34
BstDEI	CTNAG	6 cut(s)	362, 552, 774, 818, 975, 1070
BstDSI	CCRYGG	3 cut(s)	153, 192, 237
BstEII	GGTNACC	1 cut(s)	1031
BstF5I	GGATG	2 cut(s)	424, 661
BstH2I	RGCGCY	1 cut(s)	781
BstHHI	GCGC	1 cut(s)	780
BstKTI	GATC	5 cut(s)	46, 853, 1042, 1125, 1170
BstMAI	GTCTC	4 cut(s)	476, 990, 1071, 1325
BstMBI	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 553, 562, 565, 592, 642, 922
BstNI	CCWGG	1 cut(s)	492
BstPI	GGTNACC	1 cut(s)	1031
BstSCI	CCNGG	5 cut(s)	435, 436, 450, 451, 490
BstSFI	CTRYAG	3 cut(s)	24, 584, 861
BstV2I	GAAGAC	1 cut(s)	1284
BstXI	CCANNNNNNTGG	1 cut(s)	1150
BsuRI	GGCC	2 cut(s)	345, 503
BtgI	CCRYGG	3 cut(s)	153, 192, 237
BtsCI	GGATG	2 cut(s)	424, 661
BveI	ACCTGC	1 cut(s)	366
Cac8I	GCNNGC	1 cut(s)	34
CaiI	CAGNNNCTG	1 cut(s)	592
CciI	TCATGA	2 cut(s)	127, 1042
CfoI	GCGC	1 cut(s)	780
Cfr13I	GGNCC	5 cut(s)	241, 344, 618, 756, 1153
Cfr9I	CCCGGG	2 cut(s)	436, 451
Csp6I	GTAC	4 cut(s)	4, 15, 51, 604
CspCI	CAANNNNNGTGG	4 cut(s)	103, 138, 595, 630
CviQI	GTAC	4 cut(s)	4, 15, 51, 604
DdeI	CTNAG	6 cut(s)	362, 552, 774, 818, 975, 1070
DpnI	GATC	5 cut(s)	45, 852, 1041, 1124, 1169
DpnII	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
DrdI	GACNNNNNNGTC	1 cut(s)	1109
DseDI	GACNNNNNNGTC	1 cut(s)	1109
Eam1104I	CTCTTC	5 cut(s)	156, 394, 511, 727, 733
EarI	CTCTTC	5 cut(s)	156, 394, 511, 727, 733
Ecl136II	GAGCTC	3 cut(s)	166, 895, 1077
Eco130I	CCWWGG	4 cut(s)	153, 192, 237, 711
Eco24I	GRGCYC	3 cut(s)	168, 897, 1079
Eco31I	GGTCTC	1 cut(s)	1071
Eco47I	GGWCC	4 cut(s)	241, 618, 756, 1153
Eco53kI	GAGCTC	3 cut(s)	166, 895, 1077
Eco88I	CYCGRG	3 cut(s)	436, 451, 479
Eco91I	GGTNACC	1 cut(s)	1031
EcoICRI	GAGCTC	3 cut(s)	166, 895, 1077
EcoO109I	RGGNCCY	1 cut(s)	344
EcoO65I	GGTNACC	1 cut(s)	1031
EcoRI	GAATTC	1 cut(s)	1249
EcoRII	CCWGG	1 cut(s)	490
EcoT14I	CCWWGG	4 cut(s)	153, 192, 237, 711
EcoT38I	GRGCYC	3 cut(s)	168, 897, 1079
ErhI	CCWWGG	4 cut(s)	153, 192, 237, 711
Esp3I	CGTCTC	1 cut(s)	990
FaqI	GGGAC	4 cut(s)	320, 574, 769, 1251
FbaI	TGATCA	1 cut(s)	1039
FblI	GTMKAC	1 cut(s)	1113
FokI	GGATG	2 cut(s)	411, 668
FriOI	GRGCYC	3 cut(s)	168, 897, 1079
GlaI	GCGC	1 cut(s)	779
GsaI	CCCAGC	1 cut(s)	1236
GsuI	CTGGAG	2 cut(s)	722, 1014
HaeII	RGCGCY	1 cut(s)	781
HaeIII	GGCC	2 cut(s)	345, 503
HapII	CCGG	3 cut(s)	437, 452, 1120
HhaI	GCGC	1 cut(s)	780
Hin1I	GRCGYC	1 cut(s)	1116
Hin6I	GCGC	1 cut(s)	778
HinP1I	GCGC	1 cut(s)	778
HincII	GTYRAC	1 cut(s)	1114
HindII	GTYRAC	1 cut(s)	1114
HindIII	AAGCTT	1 cut(s)	1193
HinfI	GANTC	4 cut(s)	71, 484, 789, 1333
HpaII	CCGG	3 cut(s)	437, 452, 1120
HphI	GGTGA	2 cut(s)	1043, 1132
Hpy166II	GTNNAC	3 cut(s)	10, 664, 1114
Hpy188I	TCNGA	4 cut(s)	70, 216, 819, 1071
Hpy188III	TCNNGA	8 cut(s)	128, 621, 898, 1043, 1120, 1156, 1199, 1337
Hpy8I	GTNNAC	3 cut(s)	10, 664, 1114
Hpy99I	CGWCG	1 cut(s)	1118
HpyAV	CCTTC	1 cut(s)	1280
HpyCH4III	ACNGT	2 cut(s)	14, 907
HpyCH4IV	ACGT	2 cut(s)	6, 1116
HpyCH4V	TGCA	7 cut(s)	26, 36, 325, 586, 1210, 1304, 1352
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 553, 562, 565, 592, 642, 922
HpyF3I	CTNAG	6 cut(s)	362, 552, 774, 818, 975, 1070
HpySE526I	ACGT	2 cut(s)	6, 1116
Hsp92I	GRCGYC	1 cut(s)	1116
HspAI	GCGC	1 cut(s)	778
Kpn2I	TCCGGA	1 cut(s)	1119
Ksp22I	TGATCA	1 cut(s)	1039
Kzo9I	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
LguI	GCTCTTC	1 cut(s)	156
LmnI	GCTCC	5 cut(s)	402, 577, 892, 957, 1074
LweI	GCATC	2 cut(s)	862, 866
MaeII	ACGT	2 cut(s)	6, 1116
MaeIII	GTNAC	3 cut(s)	1013, 1031, 1138
MalI	GATC	5 cut(s)	45, 852, 1041, 1124, 1169
MboI	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
MfeI	CAATTG	1 cut(s)	332
MhlI	GDGCHC	4 cut(s)	168, 399, 897, 1079
MluCI	AATT	5 cut(s)	198, 332, 824, 1249, 1356
MlyI	GAGTC	3 cut(s)	478, 798, 1327
MroI	TCCGGA	1 cut(s)	1119
MroXI	GAANNNNTTC	1 cut(s)	828
MseI	TTAA	2 cut(s)	273, 414
MslI	CAYNNNNRTG	2 cut(s)	1041, 1277
MspA1I	CMGCKG	3 cut(s)	29, 544, 568
MspI	CCGG	3 cut(s)	437, 452, 1120
MspR9I	CCNGG	5 cut(s)	437, 438, 452, 453, 492
MunI	CAATTG	1 cut(s)	332
MvaI	CCWGG	1 cut(s)	492
MwoI	GCNNNNNNNGC	7 cut(s)	29, 553, 562, 565, 592, 642, 922
NciI	CCSGG	4 cut(s)	437, 438, 452, 453
NcoI	CCATGG	3 cut(s)	153, 192, 237
NdeII	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
NlaIV	GGNNCC	4 cut(s)	235, 619, 757, 831
NmuCI	GTSAC	2 cut(s)	1031, 1138
PagI	TCATGA	2 cut(s)	127, 1042
PciSI	GCTCTTC	1 cut(s)	156
PdmI	GAANNNNTTC	1 cut(s)	828
PfeI	GAWTC	1 cut(s)	71
PflMI	CCANNNNNTGG	1 cut(s)	303
PleI	GAGTC	3 cut(s)	478, 797, 1327
PpsI	GAGTC	3 cut(s)	478, 797, 1327
Ppu21I	YACGTR	1 cut(s)	7
Psp124BI	GAGCTC	3 cut(s)	168, 897, 1079
Psp6I	CCWGG	1 cut(s)	490
PspEI	GGTNACC	1 cut(s)	1031
PspFI	CCCAGC	1 cut(s)	1232
PspGI	CCWGG	1 cut(s)	490
PspN4I	GGNNCC	4 cut(s)	235, 619, 757, 831
PspPI	GGNCC	5 cut(s)	241, 344, 618, 756, 1153
PstI	CTGCAG	2 cut(s)	28, 588
PstNI	CAGNNNCTG	1 cut(s)	592
PvuII	CAGCTG	2 cut(s)	29, 544
RsaI	GTAC	4 cut(s)	5, 16, 52, 605
RsaNI	GTAC	4 cut(s)	4, 15, 51, 604
RseI	CAYNNNNRTG	2 cut(s)	1041, 1277
SacI	GAGCTC	3 cut(s)	168, 897, 1079
SalI	GTCGAC	1 cut(s)	1112
SapI	GCTCTTC	1 cut(s)	156
SaqAI	TTAA	2 cut(s)	273, 414
Sau3AI	GATC	5 cut(s)	43, 850, 1039, 1122, 1167
Sau96I	GGNCC	5 cut(s)	241, 344, 618, 756, 1153
ScaI	AGTACT	2 cut(s)	16, 52
SchI	GAGTC	3 cut(s)	478, 798, 1327
ScrFI	CCNGG	5 cut(s)	437, 438, 452, 453, 492
SduI	GDGCHC	4 cut(s)	168, 399, 897, 1079
SfaNI	GCATC	2 cut(s)	862, 866
SfcI	CTRYAG	3 cut(s)	24, 584, 861
SinI	GGWCC	4 cut(s)	241, 618, 756, 1153
SmaI	CCCGGG	2 cut(s)	438, 453
SmiMI	CAYNNNNRTG	2 cut(s)	1041, 1277
SmlI	CTYRAG	2 cut(s)	139, 896
SmoI	CTYRAG	2 cut(s)	139, 896
Sse9I	AATT	5 cut(s)	198, 332, 824, 1249, 1356
SsiI	CCGC	6 cut(s)	189, 497, 500, 557, 563, 566
SstI	GAGCTC	3 cut(s)	168, 897, 1079
StyD4I	CCNGG	5 cut(s)	435, 436, 450, 451, 490
StyI	CCWWGG	4 cut(s)	153, 192, 237, 711
TaaI	ACNGT	2 cut(s)	14, 907
TaiI	ACGT	2 cut(s)	9, 1119
TaqI	TCGA	3 cut(s)	632, 853, 1113
TaqII	GACCGA	1 cut(s)	499
TasI	AATT	5 cut(s)	198, 332, 824, 1249, 1356
TatI	WGTACW	2 cut(s)	14, 50
TauI	GCSGC	6 cut(s)	191, 500, 503, 559, 565, 568
TfiI	GAWTC	1 cut(s)	71
Tru1I	TTAA	2 cut(s)	273, 414
Tru9I	TTAA	2 cut(s)	273, 414
TseFI	GTSAC	2 cut(s)	1031, 1138
Tsp45I	GTSAC	2 cut(s)	1031, 1138
TspDTI	ATGAA	9 cut(s)	144, 333, 734, 800, 1034, 1149, 1211, 1242, 1299
TspMI	CCCGGG	2 cut(s)	436, 451
Van91I	CCANNNNNTGG	1 cut(s)	303
VpaK11BI	GGWCC	4 cut(s)	241, 618, 756, 1153
XapI	RAATTY	1 cut(s)	1249
XcmI	CCANNNNNNNNNTGG	1 cut(s)	265
XmaI	CCCGGG	2 cut(s)	436, 451
XmiI	GTMKAC	1 cut(s)	1113
XmnI	GAANNNNTTC	1 cut(s)	828
ZraI	GACGTC	1 cut(s)	1117
ZrmI	AGTACT	2 cut(s)	16, 52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.