Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000211

Physical Location & Seq

Genomic Coordinates Reverse (-)

22116532 .. 22124568

Gene Structure 8037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0130400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGGAACAGAAGAGATAAAGAAAGATGCGGATGCCAGCAATTGGCAATCTCATTTGGCATATGATCAGTGGGTAGCACTTCCTGTATCTGGTTCACGACCACCAGCTCGCTACAAGCATGCTGCTGTAGTAGTTGATGAAAACTTATATATTGTCGGCGGGAGTCGTAATGGACGGTATCTATCTGATGTTCAGGTCTTTGACTTTAGAAATTTGTTATGGTCAACTATAAAACTGAATGCAAATTCCAATAATTTTGAAGATAGTGGTCTGCAGGAAGTTGTTCCACCCACTTCTTCTCACAATCTGGTGAAGTGGGGAAACAAACTTCTGCTGCTTGGTGGGAATTCAAAGAAGTTGTCTGATAAAATAATAGTGTGGTTCATCGATTTGGAAACACACCTCTGTGGCGTCATGGAGACTTCAGGAAAAGTTCCGGCAGCTCGTGCAGGGCAGTCAACTACACTGGTTGGCTCTAGATTGATAATGTTCGGTGGAGAAGACAGGAGCAGGAAATTGTTGAATGATGTCAATGTTCTTGATTTAGAGACTATGACTTGGGATGTGATGGAGACATCGCAGACTCCTCCAGCTCCCAGATTTGATCACACAGCAGCAGTACATGCAGAACGTTACCTTCTAATTTTTGGTGGCTGTTCACATGCTAGTTTCTTCAATGATCTTCATGTTCTGGACTTGCAAGCTATGGAGTGGTCCCAGCCACAAATTCAGGGTGATCTTGTAACTCCTAGGGCAGGTCATGCGGGTATAACTATTGATGAAAACTGGTATATAGTTGGCGGTGGAGATAACAAAAATGGTTGCCCAGAAACCCTGGCCTTAAATATGTCTAAGCTAGTGTGGTCAGTGTCAACAATTGTAAAGCAAAGGGATCCACTCGCTAGTGAGGGTCTCACTGTCTGCTCCGTGAATATTGATGGAAAGAAGCATTTGGTTGCCTTTGGTGGCTATAATGGGAACTATAGCAACGAGGTTTTTGTTATGAGACCCAAACCAAATGACTCTTCACAACGAAAGATATTCCAGTCACCAGCGGCTGCTGCAGCAGCAGCTTCTGTTACTGCTGCCTATGCCTTGACTAAATCAGAAAAATTGAATTTCACAACAGTACAGTCGAACTCCAAGGGAGCTGAAAATCATCGTTCTGAACAAGATTTCACAATTGACATAGAGGCCCTGAGAGAAGAGAAGGGTGTGCTGGAATTGTCTCTTTCCGAAGTCAGGAAAGAAAATGCTAGGGTCAGCCAGGAGATAGATGAAGTCAACAATACTCACAGTGAGTTGTCCAAGGAACTGCAGTCAGTCCAAGGGCAACTTGTAGCTGAGAGATCAAGATGCTTTAAATTGGAGGCTCAAATCAGTGAACTACAGAAGATACTAGAATCAGTGCAGTCCATTGAGGATGAGGTACAGGCACTTCGCGGACAGAAATCTGCAATGGAACGGGATATGGAGCTTGCTTCATCTGTTCAGAGACAAGGTTCTGGTGGTGTCTGGAGATGGATTGCTGGTAGTGGTGGCAACGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0042545 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045229 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048518 GO:0048522 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051179 GO:0051252 GO:0051641 GO:0052386 GO:0052543 GO:0052545 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0071554 GO:0071555 GO:0071840 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

516

Amino Acids

56.75

Weight (kDa)

5.57

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_ATRN-LZTR1	PF24981	7 - 155	9e-13	Attractin/LZTR1 beta-propeller
Kelch_KLHDC2_KLHL20_DRC7	PF24681	18 - 80	1.2e-12	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42	PF13415	23 - 81	1.3e-08	FBX42, beta-propeller domain
Kelch_1	PF01344	36 - 77	1.6e-09	Kelch motif
Beta-prop_ATRN-LZTR1	PF24981	94 - 222	8.3e-14	Attractin/LZTR1 beta-propeller
Beta-prop_FBX42	PF13415	96 - 222	9.8e-26	FBX42, beta-propeller domain
Kelch_HCF	PF13854	96 - 268	1.7e-17	Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7	PF24681	100 - 323	1.1e-53	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1	PF24981	162 - 240	3.3e-13	Attractin/LZTR1 beta-propeller
Beta-prop_TYW4	PF13418	197 - 374	1.6e-06	tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_FBX42	PF13415	200 - 355	9.9e-21	FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1	PF24981	214 - 347	2.1e-11	Attractin/LZTR1 beta-propeller
ACBP4_C	PF24922	395 - 495	2.3e-37	Acyl-CoA-binding domain-containing protein 4-6, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45140 AT3G45140
fragaria_vesca	FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica	MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica	Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis	pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis	RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata	RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora	Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii	Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa	Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha	Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana	Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	746
AccB7I	CCANNNNNTGG	1 cut(s)	42
AccII	CGCG	1 cut(s)	1443
AciI	CCGC	6 cut(s)	29, 159, 764, 801, 1055, 1443
AclI	AACGTT	1 cut(s)	631
AclWI	GGATC	2 cut(s)	887, 900
AcsI	RAATTY	5 cut(s)	211, 244, 346, 726, 1117
AcuI	CTGAAG	1 cut(s)	408
AcyI	GRCGYC	1 cut(s)	411
AfaI	GTAC	3 cut(s)	621, 1131, 1431
AfiI	CCNNNNNNNGG	4 cut(s)	42, 89, 755, 1242
AgsI	TTSAA	5 cut(s)	260, 351, 523, 676, 1117
AjnI	CCWGG	2 cut(s)	834, 1266
AjuI	GAANNNNNNNTTGG	2 cut(s)	1009, 1041
AleI	CACNNNNGTG	1 cut(s)	405
AluBI	AGCT	9 cut(s)	107, 443, 593, 704, 856, 1073, 1151, 1343, 1477
AluI	AGCT	9 cut(s)	107, 443, 593, 704, 856, 1073, 1151, 1343, 1477
Alw26I	GTCTC	7 cut(s)	413, 542, 566, 917, 1000, 1233, 1489
AlwI	GGATC	2 cut(s)	887, 900
AlwNI	CAGNNNCTG	2 cut(s)	1058, 1076
AoxI	GGCC	2 cut(s)	837, 1194
ApoI	RAATTY	5 cut(s)	211, 244, 346, 726, 1117
ArsI	GACNNNNNNTTYG	2 cut(s)	344, 376
Asp700I	GAANNNNTTC	1 cut(s)	282
AspA2I	CCTAGG	1 cut(s)	749
AspS9I	GGNCC	2 cut(s)	714, 1195
AsuHPI	GGTGA	3 cut(s)	322, 746, 1041
AvaII	GGWCC	1 cut(s)	714
AvrII	CCTAGG	1 cut(s)	749
BamHI	GGATCC	1 cut(s)	892
BarI	GAAGNNNNNNTAC	2 cut(s)	1422, 1454
BauI	CACGAG	1 cut(s)	444
BbsI	GAAGAC	1 cut(s)	507
BccI	CCATC	3 cut(s)	562, 932, 1515
BciT130I	CCWGG	2 cut(s)	836, 1268
BclI	TGATCA	2 cut(s)	64, 604
BcoDI	GTCTC	7 cut(s)	413, 542, 566, 917, 1000, 1233, 1489
BfaI	CTAG	7 cut(s)	477, 666, 750, 857, 903, 1257, 1400
BfmI	CTRYAG	6 cut(s)	126, 272, 982, 1062, 1316, 1388
BfuAI	ACCTGC	1 cut(s)	746
BlnI	CCTAGG	1 cut(s)	749
Bme1390I	CCNGG	2 cut(s)	836, 1268
Bme18I	GGWCC	1 cut(s)	714
BmgT120I	GGNCC	2 cut(s)	714, 1195
BmiI	GGNNCC	2 cut(s)	716, 894
BmrFI	CCNGG	2 cut(s)	836, 1268
BmsI	GCATC	3 cut(s)	16, 22, 1346
BpiI	GAAGAC	1 cut(s)	507
BpmI	CTGGAG	2 cut(s)	573, 1537
Bsa29I	ATCGAT	1 cut(s)	387
BsaHI	GRCGYC	1 cut(s)	411
BsaI	GGTCTC	2 cut(s)	917, 1000
BsaJI	CCNNGG	5 cut(s)	749, 834, 1143, 1308, 1327
Bsc4I	CCNNNNNNNGG	4 cut(s)	42, 89, 755, 1242
Bse1I	ACTGG	3 cut(s)	471, 791, 1045
Bse3DI	GCAATG	1 cut(s)	1464
BseBI	CCWGG	2 cut(s)	836, 1268
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	5 cut(s)	749, 834, 1143, 1308, 1327
BseGI	GGATG	3 cut(s)	37, 568, 1429
BseLI	CCNNNNNNNGG	4 cut(s)	42, 89, 755, 1242
BseMI	GCAATG	1 cut(s)	1464
BseMII	CTCAG	2 cut(s)	1190, 1335
BseNI	ACTGG	3 cut(s)	471, 791, 1045
BseRI	GAGGAG	1 cut(s)	576
BseYI	CCCAGC	1 cut(s)	717
BsgI	GTGCAG	2 cut(s)	468, 1430
Bsh1236I	CGCG	1 cut(s)	1443
BshFI	GGCC	2 cut(s)	839, 1196
BshVI	ATCGAT	1 cut(s)	387
BsiSI	CCGG	1 cut(s)	437
BslFI	GGGAC	1 cut(s)	700
BslI	CCNNNNNNNGG	4 cut(s)	42, 89, 755, 1242
BsmAI	GTCTC	7 cut(s)	413, 542, 566, 917, 1000, 1233, 1489
BsmFI	GGGAC	1 cut(s)	700
BsmI	GAATGC	1 cut(s)	244
BsnI	GGCC	2 cut(s)	839, 1196
Bso31I	GGTCTC	2 cut(s)	917, 1000
Bsp143I	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
BspACI	CCGC	6 cut(s)	29, 159, 764, 801, 1055, 1443
BspANI	GGCC	2 cut(s)	839, 1196
BspCNI	CTCAG	2 cut(s)	1191, 1336
BspDI	ATCGAT	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	1443
BspLI	GGNNCC	2 cut(s)	716, 894
BspMAI	CTGCAG	3 cut(s)	276, 1066, 1320
BspMI	ACCTGC	1 cut(s)	746
BspPI	GGATC	2 cut(s)	887, 900
BspTNI	GGTCTC	2 cut(s)	917, 1000
BsrDI	GCAATG	1 cut(s)	1464
BsrI	ACTGG	3 cut(s)	471, 791, 1045
BssECI	CCNNGG	5 cut(s)	749, 834, 1143, 1308, 1327
BssMI	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	1 cut(s)	444
BssT1I	CCWWGG	4 cut(s)	749, 1143, 1308, 1327
Bst2BI	CACGAG	1 cut(s)	444
Bst2UI	CCWGG	2 cut(s)	836, 1268
Bst4CI	ACNGT	5 cut(s)	177, 919, 1129, 1134, 1298
Bst6I	CTCTTC	3 cut(s)	6, 1030, 1200
BstACI	GRCGYC	1 cut(s)	411
BstAPI	GCANNNNNTGC	3 cut(s)	446, 623, 761
BstC8I	GCNNGC	5 cut(s)	37, 109, 120, 702, 1479
BstDEI	CTNAG	3 cut(s)	852, 1199, 1344
BstENI	CCTNNNNNAGG	1 cut(s)	753
BstF5I	GGATG	3 cut(s)	37, 568, 1429
BstFNI	CGCG	1 cut(s)	1443
BstKTI	GATC	6 cut(s)	67, 607, 682, 739, 895, 1352
BstMAI	GTCTC	7 cut(s)	413, 542, 566, 917, 1000, 1233, 1489
BstMBI	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
BstMWI	GCNNNNNNNGC	8 cut(s)	446, 623, 761, 1061, 1064, 1067, 1070, 1091
BstNI	CCWGG	2 cut(s)	836, 1268
BstNSI	RCATGY	3 cut(s)	122, 626, 665
BstSCI	CCNGG	2 cut(s)	834, 1266
BstSFI	CTRYAG	6 cut(s)	126, 272, 982, 1062, 1316, 1388
BstUI	CGCG	1 cut(s)	1443
BstV2I	GAAGAC	1 cut(s)	507
BstX2I	RGATCY	1 cut(s)	892
BstYI	RGATCY	1 cut(s)	892
Bsu15I	ATCGAT	1 cut(s)	387
BsuRI	GGCC	2 cut(s)	839, 1196
BsuTUI	ATCGAT	1 cut(s)	387
BtgZI	GCGATG	1 cut(s)	561
BtsCI	GGATG	3 cut(s)	37, 568, 1429
BtsIMutI	CAGTG	7 cut(s)	74, 464, 873, 915, 1303, 1387, 1413
BveI	ACCTGC	1 cut(s)	746
Cac8I	GCNNGC	5 cut(s)	37, 109, 120, 702, 1479
CaiI	CAGNNNCTG	2 cut(s)	1058, 1076
Cfr13I	GGNCC	2 cut(s)	714, 1195
ClaI	ATCGAT	1 cut(s)	387
CseI	GACGC	1 cut(s)	400
Csp6I	GTAC	3 cut(s)	620, 1130, 1430
CviAII	CATG	6 cut(s)	119, 415, 623, 662, 686, 761
CviQI	GTAC	3 cut(s)	620, 1130, 1430
DdeI	CTNAG	3 cut(s)	852, 1199, 1344
DpnI	GATC	6 cut(s)	66, 606, 681, 738, 894, 1351
DpnII	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
DraI	TTTAAA	1 cut(s)	1363
Eam1104I	CTCTTC	3 cut(s)	6, 1030, 1200
EarI	CTCTTC	3 cut(s)	6, 1030, 1200
Eco130I	CCWWGG	4 cut(s)	749, 1143, 1308, 1327
Eco31I	GGTCTC	2 cut(s)	917, 1000
Eco47I	GGWCC	1 cut(s)	714
Eco57I	CTGAAG	1 cut(s)	408
EcoNI	CCTNNNNNAGG	1 cut(s)	753
EcoO109I	RGGNCCY	1 cut(s)	1195
EcoRI	GAATTC	1 cut(s)	346
EcoRII	CCWGG	2 cut(s)	834, 1266
EcoT14I	CCWWGG	4 cut(s)	749, 1143, 1308, 1327
ErhI	CCWWGG	4 cut(s)	749, 1143, 1308, 1327
FaeI	CATG	6 cut(s)	122, 418, 626, 665, 689, 764
FalI	AAGNNNNNCTT	2 cut(s)	1320, 1352
FaqI	GGGAC	1 cut(s)	700
FatI	CATG	6 cut(s)	118, 414, 622, 661, 685, 760
FauI	CCCGC	2 cut(s)	152, 757
FauNDI	CATATG	1 cut(s)	61
FbaI	TGATCA	2 cut(s)	64, 604
FokI	GGATG	3 cut(s)	44, 575, 1436
FspBI	CTAG	7 cut(s)	477, 666, 750, 857, 903, 1257, 1400
GsaI	CCCAGC	1 cut(s)	721
GsuI	CTGGAG	2 cut(s)	573, 1537
HaeIII	GGCC	2 cut(s)	839, 1196
HapII	CCGG	1 cut(s)	437
HgaI	GACGC	1 cut(s)	400
Hin1I	GRCGYC	1 cut(s)	411
Hin1II	CATG	6 cut(s)	122, 418, 626, 665, 689, 764
HincII	GTYRAC	4 cut(s)	225, 459, 873, 1285
HindII	GTYRAC	4 cut(s)	225, 459, 873, 1285
HinfI	GANTC	4 cut(s)	163, 583, 1022, 1403
HpaII	CCGG	1 cut(s)	437
HphI	GGTGA	3 cut(s)	322, 746, 1041
Hpy166II	GTNNAC	7 cut(s)	95, 225, 459, 659, 873, 1285, 1385
Hpy188I	TCNGA	6 cut(s)	187, 364, 1108, 1168, 1237, 1494
Hpy188III	TCNNGA	8 cut(s)	96, 426, 477, 539, 692, 1243, 1353, 1516
Hpy8I	GTNNAC	7 cut(s)	95, 225, 459, 659, 873, 1285, 1385
HpyAV	CCTTC	2 cut(s)	647, 1204
HpyCH4III	ACNGT	5 cut(s)	177, 919, 1129, 1134, 1298
HpyCH4IV	ACGT	1 cut(s)	631
HpyCH4V	TGCA	9 cut(s)	242, 274, 449, 626, 700, 1064, 1318, 1411, 1457
HpyF10VI	GCNNNNNNNGC	8 cut(s)	446, 623, 761, 1061, 1064, 1067, 1070, 1091
HpyF3I	CTNAG	3 cut(s)	852, 1199, 1344
HpySE526I	ACGT	1 cut(s)	631
Hsp92I	GRCGYC	1 cut(s)	411
Hsp92II	CATG	6 cut(s)	122, 418, 626, 665, 689, 764
Ksp22I	TGATCA	2 cut(s)	64, 604
Kzo9I	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
LmnI	GCTCC	5 cut(s)	507, 598, 929, 1148, 1474
LweI	GCATC	3 cut(s)	16, 22, 1346
MaeI	CTAG	7 cut(s)	477, 666, 750, 857, 903, 1257, 1400
MaeII	ACGT	1 cut(s)	631
MaeIII	GTNAC	4 cut(s)	632, 742, 1047, 1078
MalI	GATC	6 cut(s)	66, 606, 681, 738, 894, 1351
MboI	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
MboII	GAAGA	9 cut(s)	23, 272, 288, 512, 664, 674, 1017, 1217, 1405
MfeI	CAATTG	3 cut(s)	40, 876, 1182
MflI	RGATCY	1 cut(s)	892
MlyI	GAGTC	3 cut(s)	172, 577, 1016
MnlI	CCTC	8 cut(s)	413, 597, 901, 985, 1186, 1363, 1414, 1420
MroXI	GAANNNNTTC	1 cut(s)	282
MseI	TTAA	2 cut(s)	842, 1362
MslI	CAYNNNNRTG	1 cut(s)	405
MspA1I	CMGCKG	1 cut(s)	1055
MspI	CCGG	1 cut(s)	437
MspR9I	CCNGG	2 cut(s)	836, 1268
MunI	CAATTG	3 cut(s)	40, 876, 1182
Mva1269I	GAATGC	1 cut(s)	244
MvaI	CCWGG	2 cut(s)	836, 1268
MvnI	CGCG	1 cut(s)	1443
MwoI	GCNNNNNNNGC	8 cut(s)	446, 623, 761, 1061, 1064, 1067, 1070, 1091
NdeI	CATATG	1 cut(s)	61
NdeII	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
NlaIII	CATG	6 cut(s)	122, 418, 626, 665, 689, 764
NlaIV	GGNNCC	2 cut(s)	716, 894
NmuCI	GTSAC	1 cut(s)	1047
NspI	RCATGY	3 cut(s)	122, 626, 665
OliI	CACNNNNGTG	1 cut(s)	405
PaeI	GCATGC	1 cut(s)	122
PctI	GAATGC	1 cut(s)	244
PdmI	GAANNNNTTC	1 cut(s)	282
PfeI	GAWTC	1 cut(s)	1403
PflMI	CCANNNNNTGG	1 cut(s)	42
PleI	GAGTC	3 cut(s)	171, 577, 1016
PpsI	GAGTC	3 cut(s)	171, 577, 1016
Psp1406I	AACGTT	1 cut(s)	631
Psp6I	CCWGG	2 cut(s)	834, 1266
PspFI	CCCAGC	1 cut(s)	717
PspGI	CCWGG	2 cut(s)	834, 1266
PspN4I	GGNNCC	2 cut(s)	716, 894
PspPI	GGNCC	2 cut(s)	714, 1195
PstI	CTGCAG	3 cut(s)	276, 1066, 1320
PstNI	CAGNNNCTG	2 cut(s)	1058, 1076
PsuI	RGATCY	1 cut(s)	892
RsaI	GTAC	3 cut(s)	621, 1131, 1431
RsaNI	GTAC	3 cut(s)	620, 1130, 1430
RseI	CAYNNNNRTG	1 cut(s)	405
SaqAI	TTAA	2 cut(s)	842, 1362
Sau3AI	GATC	6 cut(s)	64, 604, 679, 736, 892, 1349
Sau96I	GGNCC	2 cut(s)	714, 1195
SchI	GAGTC	3 cut(s)	172, 577, 1016
ScrFI	CCNGG	2 cut(s)	836, 1268
SfaNI	GCATC	3 cut(s)	16, 22, 1346
SfcI	CTRYAG	6 cut(s)	126, 272, 982, 1062, 1316, 1388
SinI	GGWCC	1 cut(s)	714
SmiMI	CAYNNNNRTG	1 cut(s)	405
SphI	GCATGC	1 cut(s)	122
SsiI	CCGC	6 cut(s)	29, 159, 764, 801, 1055, 1443
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	7 cut(s)	477, 666, 750, 857, 903, 1257, 1400
StyD4I	CCNGG	2 cut(s)	834, 1266
StyI	CCWWGG	4 cut(s)	749, 1143, 1308, 1327
TaaI	ACNGT	5 cut(s)	177, 919, 1129, 1134, 1298
TaiI	ACGT	1 cut(s)	634
TaqI	TCGA	2 cut(s)	387, 1136
TatI	WGTACW	2 cut(s)	619, 1129
TauI	GCSGC	1 cut(s)	1058
TfiI	GAWTC	1 cut(s)	1403
Tru1I	TTAA	2 cut(s)	842, 1362
Tru9I	TTAA	2 cut(s)	842, 1362
TscAI	CASTG	7 cut(s)	74, 471, 873, 922, 1303, 1387, 1413
TseFI	GTSAC	1 cut(s)	1047
Tsp45I	GTSAC	1 cut(s)	1047
TspDTI	ATGAA	6 cut(s)	153, 373, 674, 795, 1293, 1473
TspGWI	ACGGA	1 cut(s)	916
TspRI	CASTG	7 cut(s)	74, 471, 873, 922, 1303, 1387, 1413
Van91I	CCANNNNNTGG	1 cut(s)	42
VpaK11BI	GGWCC	1 cut(s)	714
XagI	CCTNNNNNAGG	1 cut(s)	753
XapI	RAATTY	5 cut(s)	211, 244, 346, 726, 1117
XbaI	TCTAGA	1 cut(s)	476
XceI	RCATGY	3 cut(s)	122, 626, 665
XmaJI	CCTAGG	1 cut(s)	749
XmnI	GAANNNNTTC	1 cut(s)	282
XspI	CTAG	7 cut(s)	477, 666, 750, 857, 903, 1257, 1400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.