Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1853 |
| Acc36I | ACCTGC | 1 cut(s) | 1853 |
| AccB1I | GGYRCC | 1 cut(s) | 575 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1586 |
| AccBSI | CCGCTC | 3 cut(s) | 316, 503, 2575 |
| AccII | CGCG | 1 cut(s) | 132 |
| AciI | CCGC | 9 cut(s) | 87, 132, 278, 314, 482, 503, 1923, 2338, 2575 |
| AclWI | GGATC | 7 cut(s) | 469, 695, 890, 903, 1034, 1994, 2007 |
| AcoI | YGGCCR | 2 cut(s) | 133, 1307 |
| AcsI | RAATTY | 3 cut(s) | 1223, 1247, 2524 |
| AdeI | CACNNNGTG | 2 cut(s) | 430, 683 |
| AfaI | GTAC | 6 cut(s) | 139, 458, 854, 1735, 1901, 2312 |
| AfeI | AGCGCT | 1 cut(s) | 370 |
| AhlI | ACTAGT | 1 cut(s) | 1294 |
| AleI | CACNNNNGTG | 1 cut(s) | 218 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2703, 2735 |
| Alw21I | GWGCWC | 3 cut(s) | 525, 1681, 1914 |
| Alw26I | GTCTC | 5 cut(s) | 437, 668, 789, 1190, 2066 |
| AlwI | GGATC | 7 cut(s) | 469, 695, 890, 903, 1034, 1994, 2007 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2420 |
| Ama87I | CYCGRG | 2 cut(s) | 356, 1842 |
| Aor51HI | AGCGCT | 1 cut(s) | 370 |
| AoxI | GGCC | 9 cut(s) | 133, 824, 1307, 1342, 1413, 1553, 1878, 2185, 2216 |
| ApeKI | GCWGC | 9 cut(s) | 22, 81, 99, 712, 1000, 1754, 2291, 2420, 2564 |
| ApoI | RAATTY | 3 cut(s) | 1223, 1247, 2524 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2030, 2062 |
| AseI | ATTAAT | 1 cut(s) | 1857 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1433, 2687 |
| AspA2I | CCTAGG | 2 cut(s) | 383, 857 |
| AspLEI | GCGC | 2 cut(s) | 371, 1944 |
| AspS9I | GGNCC | 1 cut(s) | 1343 |
| AsuC2I | CCSGG | 2 cut(s) | 78, 2700 |
| AsuHPI | GGTGA | 9 cut(s) | 319, 550, 640, 752, 1354, 1601, 1881, 2108, 2490 |
| AsuNHI | GCTAGC | 1 cut(s) | 2026 |
| AvaI | CYCGRG | 2 cut(s) | 356, 1842 |
| AvrII | CCTAGG | 2 cut(s) | 383, 857 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 225, 258 |
| BalI | TGGCCA | 1 cut(s) | 1309 |
| BamHI | GGATCC | 2 cut(s) | 895, 1999 |
| BanI | GGYRCC | 1 cut(s) | 575 |
| BanII | GRGCYC | 1 cut(s) | 1914 |
| BbsI | GAAGAC | 2 cut(s) | 2043, 2379 |
| Bbv12I | GWGCWC | 3 cut(s) | 525, 1681, 1914 |
| BbvCI | CCTCAGC | 2 cut(s) | 1017, 2429 |
| BbvI | GCAGC | 9 cut(s) | 9, 93, 111, 699, 987, 1766, 2278, 2407, 2576 |
| BccI | CCATC | 5 cut(s) | 676, 1163, 1793, 2051, 2461 |
| BceAI | ACGGC | 2 cut(s) | 120, 2599 |
| BciVI | GTATCC | 1 cut(s) | 2318 |
| BclI | TGATCA | 2 cut(s) | 1359, 1974 |
| BcnI | CCSGG | 2 cut(s) | 78, 2700 |
| BcoDI | GTCTC | 5 cut(s) | 437, 668, 789, 1190, 2066 |
| BcuI | ACTAGT | 1 cut(s) | 1294 |
| BfmI | CTRYAG | 5 cut(s) | 237, 1789, 1965, 2004, 2292 |
| BfoI | RGCGCY | 2 cut(s) | 372, 1945 |
| BfuAI | ACCTGC | 1 cut(s) | 1853 |
| BfuI | GTATCC | 1 cut(s) | 2318 |
| BglII | AGATCT | 3 cut(s) | 50, 1969, 2239 |
| BlnI | CCTAGG | 2 cut(s) | 383, 857 |
| BlpI | GCTNAGC | 1 cut(s) | 2010 |
| BmcAI | AGTACT | 1 cut(s) | 1901 |
| Bme1390I | CCNGG | 2 cut(s) | 78, 2700 |
| BmeT110I | CYCGRG | 2 cut(s) | 356, 1842 |
| BmgT120I | GGNCC | 1 cut(s) | 1343 |
| BmiI | GGNNCC | 3 cut(s) | 577, 897, 2001 |
| BmrFI | CCNGG | 2 cut(s) | 78, 2700 |
| BmrI | ACTGGG | 2 cut(s) | 399, 2546 |
| BmsI | GCATC | 5 cut(s) | 180, 761, 1621, 1789, 2065 |
| BmtI | GCTAGC | 1 cut(s) | 2030 |
| BmuI | ACTGGG | 2 cut(s) | 399, 2546 |
| BoxI | GACNNNNGTC | 1 cut(s) | 449 |
| BpiI | GAAGAC | 2 cut(s) | 2043, 2379 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1836, 1868 |
| BpmI | CTGGAG | 1 cut(s) | 166 |
| Bpu10I | CCTNAGC | 4 cut(s) | 299, 1017, 1107, 2429 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2010 |
| BpuEI | CTTGAG | 2 cut(s) | 172, 1043 |
| BpuMI | CCSGG | 2 cut(s) | 78, 2700 |
| Bsa29I | ATCGAT | 1 cut(s) | 2613 |
| BsaAI | YACGTR | 1 cut(s) | 456 |
| BsaI | GGTCTC | 3 cut(s) | 789, 1190, 2066 |
| BsaJI | CCNNGG | 6 cut(s) | 383, 832, 857, 1145, 2210, 2699 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 275, 305, 2646, 2676, 2717 |
| Bse118I | RCCGGY | 2 cut(s) | 338, 560 |
| Bse1I | ACTGG | 7 cut(s) | 183, 394, 877, 1377, 1642, 1718, 2552 |
| Bse3DI | GCAATG | 4 cut(s) | 1007, 1100, 1782, 2423 |
| BseCI | ATCGAT | 1 cut(s) | 2613 |
| BseDI | CCNNGG | 6 cut(s) | 383, 832, 857, 1145, 2210, 2699 |
| BseMI | GCAATG | 4 cut(s) | 1007, 1100, 1782, 2423 |
| BseMII | CTCAG | 8 cut(s) | 86, 1031, 1527, 1541, 1927, 2001, 2420, 2706 |
| BseNI | ACTGG | 7 cut(s) | 183, 394, 877, 1377, 1642, 1718, 2552 |
| BseRI | GAGGAG | 2 cut(s) | 722, 2522 |
| BseX3I | CGGCCG | 1 cut(s) | 133 |
| BseXI | GCAGC | 9 cut(s) | 9, 93, 111, 699, 987, 1766, 2278, 2407, 2576 |
| BseYI | CCCAGC | 2 cut(s) | 478, 1345 |
| BsgI | GTGCAG | 3 cut(s) | 111, 294, 986 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| Bsh1285I | CGRYCG | 2 cut(s) | 136, 450 |
| BshFI | GGCC | 9 cut(s) | 135, 826, 1309, 1344, 1415, 1555, 1880, 2187, 2218 |
| BshNI | GGYRCC | 1 cut(s) | 575 |
| BshVI | ATCGAT | 1 cut(s) | 2613 |
| BsiEI | CGRYCG | 2 cut(s) | 136, 450 |
| BsiHKAI | GWGCWC | 3 cut(s) | 525, 1681, 1914 |
| BsiHKCI | CYCGRG | 2 cut(s) | 356, 1842 |
| BsiSI | CCGG | 5 cut(s) | 78, 339, 561, 2322, 2699 |
| BsiWI | CGTACG | 1 cut(s) | 456 |
| BsmAI | GTCTC | 5 cut(s) | 437, 668, 789, 1190, 2066 |
| BsmBI | CGTCTC | 1 cut(s) | 437 |
| BsnI | GGCC | 9 cut(s) | 135, 826, 1309, 1344, 1415, 1555, 1880, 2187, 2218 |
| Bso31I | GGTCTC | 3 cut(s) | 789, 1190, 2066 |
| BsoBI | CYCGRG | 2 cut(s) | 356, 1842 |
| Bsp1286I | GDGCHC | 3 cut(s) | 525, 1681, 1914 |
| Bsp1407I | TGTACA | 1 cut(s) | 1733 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2010 |
| Bsp19I | CCATGG | 1 cut(s) | 2210 |
| BspACI | CCGC | 9 cut(s) | 87, 132, 278, 314, 482, 503, 1923, 2338, 2575 |
| BspANI | GGCC | 9 cut(s) | 135, 826, 1309, 1344, 1415, 1555, 1880, 2187, 2218 |
| BspCNI | CTCAG | 8 cut(s) | 87, 1030, 1528, 1542, 1926, 2002, 2421, 2705 |
| BspDI | ATCGAT | 1 cut(s) | 2613 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspHI | TCATGA | 1 cut(s) | 1681 |
| BspLI | GGNNCC | 3 cut(s) | 577, 897, 2001 |
| BspMAI | CTGCAG | 3 cut(s) | 241, 1969, 2296 |
| BspMI | ACCTGC | 1 cut(s) | 1853 |
| BspOI | GCTAGC | 1 cut(s) | 2030 |
| BspPI | GGATC | 7 cut(s) | 469, 695, 890, 903, 1034, 1994, 2007 |
| BspQI | GCTCTTC | 1 cut(s) | 1439 |
| BspT107I | GGYRCC | 1 cut(s) | 575 |
| BspTNI | GGTCTC | 3 cut(s) | 789, 1190, 2066 |
| BsrBI | CCGCTC | 3 cut(s) | 316, 503, 2575 |
| BsrDI | GCAATG | 4 cut(s) | 1007, 1100, 1782, 2423 |
| BsrFI | RCCGGY | 2 cut(s) | 338, 560 |
| BsrGI | TGTACA | 1 cut(s) | 1733 |
| BsrI | ACTGG | 7 cut(s) | 183, 394, 877, 1377, 1642, 1718, 2552 |
| BssAI | RCCGGY | 2 cut(s) | 338, 560 |
| BssECI | CCNNGG | 6 cut(s) | 383, 832, 857, 1145, 2210, 2699 |
| BssT1I | CCWWGG | 5 cut(s) | 383, 832, 857, 1145, 2210 |
| Bst4CI | ACNGT | 5 cut(s) | 247, 265, 589, 1405, 1506 |
| Bst6I | CTCTTC | 6 cut(s) | 43, 49, 629, 699, 1439, 2588 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 721, 1009 |
| BstAUI | TGTACA | 1 cut(s) | 1733 |
| BstBAI | YACGTR | 1 cut(s) | 456 |
| BstC8I | GCNNGC | 8 cut(s) | 130, 340, 1005, 1646, 1659, 1882, 1965, 2028 |
| BstDSI | CCRYGG | 1 cut(s) | 2210 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstH2I | RGCGCY | 2 cut(s) | 372, 1945 |
| BstHHI | GCGC | 2 cut(s) | 371, 1944 |
| BstMAI | GTCTC | 5 cut(s) | 437, 668, 789, 1190, 2066 |
| BstMCI | CGRYCG | 2 cut(s) | 136, 450 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 721, 1009, 1018, 1654, 1964, 2683 |
| BstNSI | RCATGY | 1 cut(s) | 2365 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 449 |
| BstSCI | CCNGG | 2 cut(s) | 76, 2698 |
| BstSFI | CTRYAG | 5 cut(s) | 237, 1789, 1965, 2004, 2292 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 9 cut(s) | 9, 93, 111, 699, 987, 1766, 2278, 2407, 2576 |
| BstV2I | GAAGAC | 2 cut(s) | 2043, 2379 |
| BstX2I | RGATCY | 5 cut(s) | 50, 895, 1969, 1999, 2239 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1372 |
| BstYI | RGATCY | 5 cut(s) | 50, 895, 1969, 1999, 2239 |
| BstZI | CGGCCG | 1 cut(s) | 133 |
| Bsu15I | ATCGAT | 1 cut(s) | 2613 |
| BsuI | GTATCC | 1 cut(s) | 2318 |
| BsuRI | GGCC | 9 cut(s) | 135, 826, 1309, 1344, 1415, 1555, 1880, 2187, 2218 |
| BsuTUI | ATCGAT | 1 cut(s) | 2613 |
| BtgI | CCRYGG | 1 cut(s) | 2210 |
| BtsI | GCAGTG | 2 cut(s) | 261, 2301 |
| BveI | ACCTGC | 1 cut(s) | 1853 |
| Cac8I | GCNNGC | 8 cut(s) | 130, 340, 1005, 1646, 1659, 1882, 1965, 2028 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2420 |
| CciI | TCATGA | 1 cut(s) | 1681 |
| CfoI | GCGC | 2 cut(s) | 371, 1944 |
| Cfr10I | RCCGGY | 2 cut(s) | 338, 560 |
| Cfr13I | GGNCC | 1 cut(s) | 1343 |
| ClaI | ATCGAT | 1 cut(s) | 2613 |
| Csp6I | GTAC | 6 cut(s) | 138, 457, 853, 1734, 1900, 2311 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2144, 2179 |
| CviQI | GTAC | 6 cut(s) | 138, 457, 853, 1734, 1900, 2311 |
| DraIII | CACNNNGTG | 2 cut(s) | 430, 683 |
| EaeI | YGGCCR | 2 cut(s) | 133, 1307 |
| EagI | CGGCCG | 1 cut(s) | 133 |
| Eam1104I | CTCTTC | 6 cut(s) | 43, 49, 629, 699, 1439, 2588 |
| EarI | CTCTTC | 6 cut(s) | 43, 49, 629, 699, 1439, 2588 |
| EciI | GGCGGA | 1 cut(s) | 76 |
| Ecl136II | GAGCTC | 1 cut(s) | 1912 |
| EclXI | CGGCCG | 1 cut(s) | 133 |
| Eco130I | CCWWGG | 5 cut(s) | 383, 832, 857, 1145, 2210 |
| Eco147I | AGGCCT | 4 cut(s) | 826, 1415, 1555, 1880 |
| Eco24I | GRGCYC | 1 cut(s) | 1914 |
| Eco31I | GGTCTC | 3 cut(s) | 789, 1190, 2066 |
| Eco32I | GATATC | 1 cut(s) | 496 |
| Eco47III | AGCGCT | 1 cut(s) | 370 |
| Eco52I | CGGCCG | 1 cut(s) | 133 |
| Eco53kI | GAGCTC | 1 cut(s) | 1912 |
| Eco88I | CYCGRG | 2 cut(s) | 356, 1842 |
| EcoICRI | GAGCTC | 1 cut(s) | 1912 |
| EcoRV | GATATC | 1 cut(s) | 496 |
| EcoT14I | CCWWGG | 5 cut(s) | 383, 832, 857, 1145, 2210 |
| EcoT22I | ATGCAT | 1 cut(s) | 1782 |
| EcoT38I | GRGCYC | 1 cut(s) | 1914 |
| ErhI | CCWWGG | 5 cut(s) | 383, 832, 857, 1145, 2210 |
| Esp3I | CGTCTC | 1 cut(s) | 437 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 134, 166, 626, 658, 647, 679, 1418, 1450 |
| FauI | CCCGC | 1 cut(s) | 475 |
| FauNDI | CATATG | 1 cut(s) | 2671 |
| FbaI | TGATCA | 2 cut(s) | 1359, 1974 |
| FriOI | GRGCYC | 1 cut(s) | 1914 |
| GlaI | GCGC | 2 cut(s) | 370, 1943 |
| GsaI | CCCAGC | 2 cut(s) | 482, 1349 |
| GsuI | CTGGAG | 1 cut(s) | 166 |
| HaeII | RGCGCY | 2 cut(s) | 372, 1945 |
| HaeIII | GGCC | 9 cut(s) | 135, 826, 1309, 1344, 1415, 1555, 1880, 2187, 2218 |
| HapII | CCGG | 5 cut(s) | 78, 339, 561, 2322, 2699 |
| HhaI | GCGC | 2 cut(s) | 371, 1944 |
| Hin6I | GCGC | 2 cut(s) | 369, 1942 |
| HinP1I | GCGC | 2 cut(s) | 369, 1942 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HindIII | AAGCTT | 2 cut(s) | 1956, 2157 |
| HpaII | CCGG | 5 cut(s) | 78, 339, 561, 2322, 2699 |
| HphI | GGTGA | 9 cut(s) | 319, 550, 640, 752, 1354, 1601, 1881, 2108, 2490 |
| Hpy166II | GTNNAC | 8 cut(s) | 115, 433, 1322, 1474, 1617, 2107, 2166, 2299 |
| Hpy8I | GTNNAC | 8 cut(s) | 115, 433, 1322, 1474, 1617, 2107, 2166, 2299 |
| HpyCH4III | ACNGT | 5 cut(s) | 247, 265, 589, 1405, 1506 |
| HpyCH4IV | ACGT | 1 cut(s) | 455 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 721, 1009, 1018, 1654, 1964, 2683 |
| HpySE526I | ACGT | 1 cut(s) | 455 |
| HspAI | GCGC | 2 cut(s) | 369, 1942 |
| KroI | GCCGGC | 1 cut(s) | 338 |
| KroNI | GCCGGC | 1 cut(s) | 340 |
| Ksp22I | TGATCA | 2 cut(s) | 1359, 1974 |
| LguI | GCTCTTC | 1 cut(s) | 1439 |
| LmnI | GCTCC | 4 cut(s) | 89, 500, 709, 2654 |
| Lsp1109I | GCAGC | 9 cut(s) | 9, 93, 111, 699, 987, 1766, 2278, 2407, 2576 |
| LweI | GCATC | 5 cut(s) | 180, 761, 1621, 1789, 2065 |
| MaeII | ACGT | 1 cut(s) | 455 |
| MbiI | CCGCTC | 3 cut(s) | 316, 503, 2575 |
| MfeI | CAATTG | 3 cut(s) | 1584, 1905, 2031 |
| MflI | RGATCY | 5 cut(s) | 50, 895, 1969, 1999, 2239 |
| MhlI | GDGCHC | 3 cut(s) | 525, 1681, 1914 |
| MlsI | TGGCCA | 1 cut(s) | 1309 |
| MluNI | TGGCCA | 1 cut(s) | 1309 |
| MlyI | GAGTC | 5 cut(s) | 601, 1104, 1717, 2540, 2658 |
| MmeI | TCCRAC | 2 cut(s) | 375, 2632 |
| Mox20I | TGGCCA | 1 cut(s) | 1309 |
| Mph1103I | ATGCAT | 1 cut(s) | 1782 |
| MroNI | GCCGGC | 1 cut(s) | 338 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1433, 2687 |
| MscI | TGGCCA | 1 cut(s) | 1309 |
| MseI | TTAA | 5 cut(s) | 1275, 1407, 1418, 1857, 2082 |
| MslI | CAYNNNNRTG | 3 cut(s) | 218, 1674, 2630 |
| Msp20I | TGGCCA | 1 cut(s) | 1309 |
| MspA1I | CMGCKG | 6 cut(s) | 22, 278, 482, 1349, 2009, 2279 |
| MspI | CCGG | 5 cut(s) | 78, 339, 561, 2322, 2699 |
| MspR9I | CCNGG | 2 cut(s) | 78, 2700 |
| MunI | CAATTG | 3 cut(s) | 1584, 1905, 2031 |
| MvnI | CGCG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 721, 1009, 1018, 1654, 1964, 2683 |
| NaeI | GCCGGC | 1 cut(s) | 340 |
| NciI | CCSGG | 2 cut(s) | 78, 2700 |
| NcoI | CCATGG | 1 cut(s) | 2210 |
| NdeI | CATATG | 1 cut(s) | 2671 |
| NgoMIV | GCCGGC | 1 cut(s) | 338 |
| NheI | GCTAGC | 1 cut(s) | 2026 |
| NlaIV | GGNNCC | 3 cut(s) | 577, 897, 2001 |
| NmeAIII | GCCGAG | 1 cut(s) | 1234 |
| NmuCI | GTSAC | 6 cut(s) | 451, 583, 1096, 1589, 2096, 2704 |
| NsiI | ATGCAT | 1 cut(s) | 1782 |
| NspI | RCATGY | 1 cut(s) | 2365 |
| OliI | CACNNNNGTG | 1 cut(s) | 218 |
| PaeR7I | CTCGAG | 2 cut(s) | 356, 1842 |
| PagI | TCATGA | 1 cut(s) | 1681 |
| PaqCI | CACCTGC | 1 cut(s) | 1853 |
| PceI | AGGCCT | 4 cut(s) | 826, 1415, 1555, 1880 |
| PciSI | GCTCTTC | 1 cut(s) | 1439 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 452, 456 |
| PdiI | GCCGGC | 1 cut(s) | 340 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1433, 2687 |
| PfeI | GAWTC | 6 cut(s) | 639, 1076, 1352, 1685, 1869, 2449 |
| Pfl23II | CGTACG | 1 cut(s) | 456 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1586 |
| Ple19I | CGATCG | 1 cut(s) | 450 |
| PleI | GAGTC | 5 cut(s) | 601, 1103, 1717, 2539, 2657 |
| PpsI | GAGTC | 5 cut(s) | 601, 1103, 1717, 2539, 2657 |
| Ppu21I | YACGTR | 1 cut(s) | 456 |
| PshAI | GACNNNNGTC | 1 cut(s) | 449 |
| PshBI | ATTAAT | 1 cut(s) | 1857 |
| Psp124BI | GAGCTC | 1 cut(s) | 1914 |
| PspFI | CCCAGC | 2 cut(s) | 478, 1345 |
| PspLI | CGTACG | 1 cut(s) | 456 |
| PspN4I | GGNNCC | 3 cut(s) | 577, 897, 2001 |
| PspPI | GGNCC | 1 cut(s) | 1343 |
| PstI | CTGCAG | 3 cut(s) | 241, 1969, 2296 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2420 |
| PsuI | RGATCY | 5 cut(s) | 50, 895, 1969, 1999, 2239 |
| PvuI | CGATCG | 1 cut(s) | 450 |
| PvuII | CAGCTG | 4 cut(s) | 22, 1349, 2009, 2279 |
| RsaI | GTAC | 6 cut(s) | 139, 458, 854, 1735, 1901, 2312 |
| RsaNI | GTAC | 6 cut(s) | 138, 457, 853, 1734, 1900, 2311 |
| RseI | CAYNNNNRTG | 3 cut(s) | 218, 1674, 2630 |
| SacI | GAGCTC | 1 cut(s) | 1914 |
| SapI | GCTCTTC | 1 cut(s) | 1439 |
| SaqAI | TTAA | 5 cut(s) | 1275, 1407, 1418, 1857, 2082 |
| Sau96I | GGNCC | 1 cut(s) | 1343 |
| ScaI | AGTACT | 1 cut(s) | 1901 |
| SchI | GAGTC | 5 cut(s) | 601, 1104, 1717, 2540, 2658 |
| ScrFI | CCNGG | 2 cut(s) | 78, 2700 |
| SduI | GDGCHC | 3 cut(s) | 525, 1681, 1914 |
| SfaNI | GCATC | 5 cut(s) | 180, 761, 1621, 1789, 2065 |
| SfcI | CTRYAG | 5 cut(s) | 237, 1789, 1965, 2004, 2292 |
| Sfr274I | CTCGAG | 2 cut(s) | 356, 1842 |
| SlaI | CTCGAG | 2 cut(s) | 356, 1842 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 218, 1674, 2630 |
| SmlI | CTYRAG | 4 cut(s) | 151, 356, 1022, 1842 |
| SmoI | CTYRAG | 4 cut(s) | 151, 356, 1022, 1842 |
| SpeI | ACTAGT | 1 cut(s) | 1294 |
| SseBI | AGGCCT | 4 cut(s) | 826, 1415, 1555, 1880 |
| SsiI | CCGC | 9 cut(s) | 87, 132, 278, 314, 482, 503, 1923, 2338, 2575 |
| SstI | GAGCTC | 1 cut(s) | 1914 |
| StuI | AGGCCT | 4 cut(s) | 826, 1415, 1555, 1880 |
| StyD4I | CCNGG | 2 cut(s) | 76, 2698 |
| StyI | CCWWGG | 5 cut(s) | 383, 832, 857, 1145, 2210 |
| TaaI | ACNGT | 5 cut(s) | 247, 265, 589, 1405, 1506 |
| TaiI | ACGT | 1 cut(s) | 458 |
| TaqI | TCGA | 8 cut(s) | 318, 357, 552, 1576, 1762, 1843, 2353, 2613 |
| TatI | WGTACW | 2 cut(s) | 1733, 1899 |
| TauI | GCSGC | 3 cut(s) | 135, 281, 1925 |
| TfiI | GAWTC | 6 cut(s) | 639, 1076, 1352, 1685, 1869, 2449 |
| Tru1I | TTAA | 5 cut(s) | 1275, 1407, 1418, 1857, 2082 |
| Tru9I | TTAA | 5 cut(s) | 1275, 1407, 1418, 1857, 2082 |
| TseFI | GTSAC | 6 cut(s) | 451, 583, 1096, 1589, 2096, 2704 |
| TseI | GCWGC | 9 cut(s) | 22, 81, 99, 712, 1000, 1754, 2291, 2420, 2564 |
| Tsp45I | GTSAC | 6 cut(s) | 451, 583, 1096, 1589, 2096, 2704 |
| TspGWI | ACGGA | 3 cut(s) | 164, 1316, 1802 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1586 |
| VspI | ATTAAT | 1 cut(s) | 1857 |
| XapI | RAATTY | 3 cut(s) | 1223, 1247, 2524 |
| XbaI | TCTAGA | 1 cut(s) | 47 |
| XceI | RCATGY | 1 cut(s) | 2365 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 217, 600, 1372 |
| XhoI | CTCGAG | 2 cut(s) | 356, 1842 |
| XmaJI | CCTAGG | 2 cut(s) | 383, 857 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1433, 2687 |
| ZrmI | AGTACT | 1 cut(s) | 1901 |
| Zsp2I | ATGCAT | 1 cut(s) | 1782 |