Rmu_ssc0000154.1_g000036

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000154.1
Physical Location & Seq
Reverse (-)
202448 .. 206332
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000154.1_g000036.1.cds

Sequence Viewer

Length: 2358 bp
ctggtagagacgggaaaagagaaggaagcgatcaaggggcactcgcacagagtgaggagagacgttgaggaggtgatatatgagagtgagttcagcatcccagcaggttttggagagattggagctgttctggttgagaatgagcaccacaaggagatttacatccagaccatcgacctcaccggcttcccaaatgcctccactctctccatttcctgtacctcctgggttcattccaaacattataatgcacagaagagagttttcttcaccaacaagtcttacttgccatcagacactccaagggggttgaagaggctaagagaaatggagctgcaaaatttgcgaggaaatggagagggcgaaagaaaaacatcggacaggatttacgattatgataaatataatgatcttggagttccagatagcaaactggctaggccagtcctggggggcaaagagcttccctaccctaggcgctgcagaacaggacgtccacgcactgaaaaggacccattatctgaagaaagaagcaccagtgtgtatataccaagagatgaagcgttttcagaggagaaacatctgacattctcaggaaagacactaaaatctgtgctgcacgctttgctccctcagcttgagatatcacttattgatcgggacttgggatttccactcttcaaagaaatagattcattgtttaatgaaggcatttcattgcctaagccaaaaactattggtttttttaggtcaatcattccaaggctagtgaaggctgtcagtgatgggcagaacgatcttttgctctttgagacccctgcaatgcttgaccgtgataaattttcttggttcagagatgaagaattttctcggcaaactctagctggtcttaatccatttagtattgagctagttaaggaatggccactgaaaagtaaacttgaccctgagatttacggcccccctgaatcattgattactactgaactggtggagaaagagatcaagggtttcatgactgtcaatgaggccttggacaaaaagaagctgtttcttttggattatcatgacctgctcattcctttagtgaacaaagtgagagaaattgaagggaccacattgtatggttctcggacactattctttctcactgagaatggctcgctgaggcctgttgctattgaacttactcggccaccaattggtgacaagccacaatggaagcaagtcttcgtcccatgctgggatgccaccggtgcctggctatggaggcttgctaaagctcatgtttgtgctcatgactctggctatcatcagcttgtgatccactggctgcggactcattgtgtgacagagccatacataattgcagctaatcggcaaatgagtgctatgcatcccatttataggcttctttgtcctcattttcggtatacaatggaaatcaatgccctggctcgagaaagcctcattaacgcaggcggagtcattgagagtagcttttcaccaggaaagtactccatggagctcagttctgctgcgtatgaccagctctggcgctttgacatggaagctttgccagccgatctgataagaagaggaatggcagttgaggatcctacagccaagcatggtctgaagctaacaattgaagactatccttttgcaaacgatggtcttattctttgggatgccattaaccagtgggtgagcgactatgtaaatcactactacccagacgctagtcttgttaaatgtgatcaggagcttcagggttggtggacagaagttagaactaaaggccatgaagacaaaaaagatgagccatggtggccagttttgaaaaccccagaagatctcattcatgttttgacaacaataatttgggtgacatccggtcatcatgcagcagtgaactttggtcagtacacatacgctggatactttccaaaccgacctacaatagctcgaaccaacatgccatgtgaagatccatccgaggaggttgtcaatacttttatgacgaaacccgaaacaatactgctaaactgctttccctcaaagattcaagcaacaacagtgatggctgtgttagatgtgttatcgacacattcacctgatgaggagtatattggcgagattttggagccatcttggactgaaaatcccgttataatggatgcattcgagtgtttcaaagacagtttaaaagagctagaaagaattattaatcagaggaacaccgataagaacctgaaaaacagagttggagcaggggttgttccatatgagcttctgaaaccattctcaaaaccaggggtcacaggaatgggagtccctaatagcatctccatctaa

Protein Analysis

785

Amino Acids

89.63

Weight (kDa)

5.77

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 246, 2174
AatII GACGTC 1 cut(s) 496
Acc36I ACCTGC 2 cut(s) 95, 1080
AccB1I GGYRCC 1 cut(s) 1256
AccB7I CCANNNNNTGG 1 cut(s) 1202
AccI GTMKAC 1 cut(s) 1433
AciI CCGC 2 cut(s) 1336, 1482
AclWI GGATC 4 cut(s) 1318, 1610, 1623, 1985
AcoI YGGCCR 3 cut(s) 923, 1193, 1832
AcsI RAATTY 3 cut(s) 340, 839, 863
AcuI CTGAAG 3 cut(s) 543, 1658, 1754
AcyI GRCGYC 1 cut(s) 493
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 3 cut(s) 220, 1517, 1928
AfiI CCNNNNNNNGG 7 cut(s) 449, 474, 1202, 1243, 1260, 1266, 1407
AgeI ACCGGT 1 cut(s) 1253
AgsI TTSAA 8 cut(s) 313, 682, 1109, 1184, 1652, 1843, 2069, 2197
AhdI GACNNNNNGTC 1 cut(s) 1896
AjnI CCWGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
AleI CACNNNNGTG 1 cut(s) 539
AloI GAACNNNNNNTCC 2 cut(s) 478, 510
Alw21I GWGCWC 3 cut(s) 147, 1297, 1530
Alw26I GTCTC 3 cut(s) 2, 54, 806
AlwI GGATC 4 cut(s) 1318, 1610, 1623, 1985
Ama87I CYCGRG 1 cut(s) 1458
AoxI GGCC 8 cut(s) 440, 923, 958, 1029, 1169, 1193, 1801, 1832
ApeKI GCWGC 7 cut(s) 334, 480, 616, 1333, 1370, 1538, 1907
ApoI RAATTY 3 cut(s) 340, 839, 863
ArsI GACNNNNNNTTYG 2 cut(s) 1646, 1678
AseI ATTAAT 1 cut(s) 2229
AsiGI ACCGGT 1 cut(s) 1253
Asp700I GAANNNNTTC 1 cut(s) 2303
AspA2I CCTAGG 1 cut(s) 473
AspLEI GCGC 2 cut(s) 480, 1560
AspS9I GGNCC 3 cut(s) 511, 959, 1113
AsuHPI GGTGA 8 cut(s) 85, 172, 262, 1217, 1497, 1720, 1900, 2106
AvaI CYCGRG 1 cut(s) 1458
AvaII GGWCC 2 cut(s) 511, 1113
AvrII CCTAGG 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 42
BalI TGGCCA 2 cut(s) 925, 1834
BamHI GGATCC 1 cut(s) 1615
BanI GGYRCC 1 cut(s) 1256
BanII GRGCYC 1 cut(s) 1530
BbsI GAAGAC 3 cut(s) 1222, 1659, 1815
Bbv12I GWGCWC 3 cut(s) 147, 1297, 1530
BbvCI CCTCAGC 2 cut(s) 633, 1166
BbvI GCAGC 7 cut(s) 321, 467, 603, 1320, 1382, 1525, 1919
BccI CCATC 7 cut(s) 179, 298, 779, 1667, 2002, 2077, 2158
BceAI ACGGC 1 cut(s) 973
BciT130I CCWGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
BciVI GTATCC 1 cut(s) 1934
BclI TGATCA 1 cut(s) 1759
BcoDI GTCTC 3 cut(s) 2, 54, 806
BfaI CTAG 7 cut(s) 438, 474, 767, 881, 911, 1743, 2216
BfmI CTRYAG 2 cut(s) 481, 1620
BfoI RGCGCY 2 cut(s) 481, 1561
BfuAI ACCTGC 2 cut(s) 95, 1080
BfuI GTATCC 1 cut(s) 1934
BglI GCCNNNNNGGC 1 cut(s) 1831
BglII AGATCT 1 cut(s) 1855
BisI GCNGC 7 cut(s) 335, 481, 617, 1334, 1371, 1539, 1908
BlnI CCTAGG 1 cut(s) 473
BlsI GCNGC 7 cut(s) 336, 482, 618, 1335, 1372, 1540, 1909
BmcAI AGTACT 1 cut(s) 1517
Bme1390I CCNGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
Bme18I GGWCC 2 cut(s) 511, 1113
BmeRI GACNNNNNGTC 1 cut(s) 1896
BmeT110I CYCGRG 1 cut(s) 1458
BmgT120I GGNCC 3 cut(s) 511, 959, 1113
BmiI GGNNCC 6 cut(s) 513, 961, 1114, 1258, 1617, 2148
BmrFI CCNGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
BmsI GCATC 5 cut(s) 105, 1237, 1405, 1681, 2170
BoxI GACNNNNGTC 1 cut(s) 1743
BpiI GAAGAC 3 cut(s) 1222, 1659, 1815
BplI GAGNNNNNCTC 4 cut(s) 1145, 1177, 1452, 1484
Bpu10I CCTNAGC 3 cut(s) 633, 723, 1166
BpuEI CTTGAG 1 cut(s) 659
BsaBI GATNNNNATC 1 cut(s) 161
BsaHI GRCGYC 1 cut(s) 493
BsaI GGTCTC 1 cut(s) 806
BsaWI WCCGGW 2 cut(s) 1253, 1895
BsaXI ACNNNNNCTCC 2 cut(s) 2262, 2292
Bsc4I CCNNNNNNNGG 7 cut(s) 449, 474, 1202, 1243, 1260, 1266, 1407
Bse118I RCCGGY 2 cut(s) 182, 1253
Bse1I ACTGG 7 cut(s) 438, 443, 537, 993, 1334, 1702, 1835
Bse3DI GCAATG 2 cut(s) 716, 828
Bse8I GATNNNNATC 1 cut(s) 161
BseBI CCWGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
BseGI GGATG 8 cut(s) 96, 162, 1252, 1396, 1696, 1892, 1994, 2185
BseJI GATNNNNATC 1 cut(s) 161
BseLI CCNNNNNNNGG 7 cut(s) 449, 474, 1202, 1243, 1260, 1266, 1407
BseMI GCAATG 2 cut(s) 716, 828
BseMII CTCAG 6 cut(s) 606, 647, 939, 1143, 1157, 1543
BseNI ACTGG 7 cut(s) 438, 443, 537, 993, 1334, 1702, 1835
BseRI GAGGAG 5 cut(s) 70, 83, 587, 2015, 2138
BseSI GKGCMC 1 cut(s) 42
BseXI GCAGC 7 cut(s) 321, 467, 603, 1320, 1382, 1525, 1919
BseYI CCCAGC 2 cut(s) 100, 1242
BsgI GTGCAG 1 cut(s) 602
BshFI GGCC 8 cut(s) 442, 925, 960, 1031, 1171, 1195, 1803, 1834
BshNI GGYRCC 1 cut(s) 1256
BshTI ACCGGT 1 cut(s) 1253
BsiHKAI GWGCWC 3 cut(s) 147, 1297, 1530
BsiHKCI CYCGRG 1 cut(s) 1458
BsiSI CCGG 3 cut(s) 183, 1254, 1896
BslFI GGGAC 4 cut(s) 674, 1126, 1220, 2321
BslI CCNNNNNNNGG 7 cut(s) 449, 474, 1202, 1243, 1260, 1266, 1407
BsmAI GTCTC 3 cut(s) 2, 54, 806
BsmBI CGTCTC 2 cut(s) 2, 54
BsmFI GGGAC 4 cut(s) 674, 1126, 1220, 2321
BsmI GAATGC 1 cut(s) 2183
BsnI GGCC 8 cut(s) 442, 925, 960, 1031, 1171, 1195, 1803, 1834
Bso31I GGTCTC 1 cut(s) 806
BsoBI CYCGRG 1 cut(s) 1458
Bsp1286I GDGCHC 4 cut(s) 42, 147, 1297, 1530
Bsp19I CCATGG 2 cut(s) 1521, 1826
BspACI CCGC 2 cut(s) 1336, 1482
BspANI GGCC 8 cut(s) 442, 925, 960, 1031, 1171, 1195, 1803, 1834
BspCNI CTCAG 6 cut(s) 605, 646, 940, 1144, 1158, 1542
BspHI TCATGA 3 cut(s) 1014, 1066, 1297
BspLI GGNNCC 6 cut(s) 513, 961, 1114, 1258, 1617, 2148
BspMAI CTGCAG 1 cut(s) 485
BspMI ACCTGC 2 cut(s) 95, 1080
BspPI GGATC 4 cut(s) 1318, 1610, 1623, 1985
BspT107I GGYRCC 1 cut(s) 1256
BspTNI GGTCTC 1 cut(s) 806
BsrDI GCAATG 2 cut(s) 716, 828
BsrFI RCCGGY 2 cut(s) 182, 1253
BsrI ACTGG 7 cut(s) 438, 443, 537, 993, 1334, 1702, 1835
BssAI RCCGGY 2 cut(s) 182, 1253
BssNAI GTATAC 1 cut(s) 1434
BssNI GRCGYC 1 cut(s) 493
BssT1I CCWWGG 6 cut(s) 302, 473, 761, 1032, 1521, 1826
Bst1107I GTATAC 1 cut(s) 1434
Bst2UI CCWGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
Bst4CI ACNGT 4 cut(s) 833, 1021, 2080, 2204
Bst6I CTCTTC 4 cut(s) 251, 308, 683, 1591
BstACI GRCGYC 1 cut(s) 493
BstAPI GCANNNNNTGC 2 cut(s) 343, 625
BstC8I GCNNGC 5 cut(s) 621, 1163, 1275, 1480, 1581
BstDEI CTNAG 8 cut(s) 320, 592, 633, 723, 948, 1152, 1166, 1529
BstDSI CCRYGG 2 cut(s) 1521, 1826
BstENI CCTNNNNNAGG 1 cut(s) 472
BstF5I GGATG 8 cut(s) 96, 162, 1252, 1396, 1696, 1892, 1994, 2185
BstH2I RGCGCY 2 cut(s) 481, 1561
BstHHI GCGC 2 cut(s) 480, 1560
BstMAI GTCTC 3 cut(s) 2, 54, 806
BstMWI GCNNNNNNNGC 7 cut(s) 343, 625, 634, 1256, 1270, 1580, 1831
BstNI CCWGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
BstNSI RCATGY 1 cut(s) 1981
BstPAI GACNNNNGTC 1 cut(s) 1743
BstSCI CCNGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
BstSFI CTRYAG 2 cut(s) 481, 1620
BstSLI GKGCMC 1 cut(s) 42
BstV1I GCAGC 7 cut(s) 321, 467, 603, 1320, 1382, 1525, 1919
BstV2I GAAGAC 3 cut(s) 1222, 1659, 1815
BstX2I RGATCY 3 cut(s) 1615, 1855, 1990
BstYI RGATCY 3 cut(s) 1615, 1855, 1990
BstZ17I GTATAC 1 cut(s) 1434
BsuI GTATCC 1 cut(s) 1934
BsuRI GGCC 8 cut(s) 442, 925, 960, 1031, 1171, 1195, 1803, 1834
BtgI CCRYGG 2 cut(s) 1521, 1826
BtsCI GGATG 8 cut(s) 96, 162, 1252, 1396, 1696, 1892, 1994, 2185
BtsI GCAGTG 1 cut(s) 1917
BtsIMutI CAGTG 9 cut(s) 501, 544, 787, 926, 1149, 1327, 1709, 1917, 2085
BveI ACCTGC 2 cut(s) 95, 1080
Cac8I GCNNGC 5 cut(s) 621, 1163, 1275, 1480, 1581
CciI TCATGA 3 cut(s) 1014, 1066, 1297
CfoI GCGC 2 cut(s) 480, 1560
Cfr10I RCCGGY 2 cut(s) 182, 1253
Cfr13I GGNCC 3 cut(s) 511, 959, 1113
CseI GACGC 1 cut(s) 1748
Csp6I GTAC 3 cut(s) 219, 1516, 1927
CspAI ACCGGT 1 cut(s) 1253
CviQI GTAC 3 cut(s) 219, 1516, 1927
DdeI CTNAG 8 cut(s) 320, 592, 633, 723, 948, 1152, 1166, 1529
DraI TTTAAA 1 cut(s) 2208
DraIII CACNNNGTG 1 cut(s) 52
DriI GACNNNNNGTC 1 cut(s) 1896
EaeI YGGCCR 3 cut(s) 923, 1193, 1832
Eam1104I CTCTTC 4 cut(s) 251, 308, 683, 1591
Eam1105I GACNNNNNGTC 1 cut(s) 1896
EarI CTCTTC 4 cut(s) 251, 308, 683, 1591
EciI GGCGGA 1 cut(s) 1497
Ecl136II GAGCTC 1 cut(s) 1528
Eco130I CCWWGG 6 cut(s) 302, 473, 761, 1032, 1521, 1826
Eco147I AGGCCT 2 cut(s) 1031, 1171
Eco24I GRGCYC 1 cut(s) 1530
Eco31I GGTCTC 1 cut(s) 806
Eco32I GATATC 1 cut(s) 645
Eco47I GGWCC 2 cut(s) 511, 1113
Eco53kI GAGCTC 1 cut(s) 1528
Eco57I CTGAAG 3 cut(s) 543, 1658, 1754
Eco88I CYCGRG 1 cut(s) 1458
EcoICRI GAGCTC 1 cut(s) 1528
EcoNI CCTNNNNNAGG 1 cut(s) 472
EcoO109I RGGNCCY 1 cut(s) 511
EcoRII CCWGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
EcoRV GATATC 1 cut(s) 645
EcoT14I CCWWGG 6 cut(s) 302, 473, 761, 1032, 1521, 1826
EcoT22I ATGCAT 2 cut(s) 1398, 2185
EcoT38I GRGCYC 1 cut(s) 1530
ErhI CCWWGG 6 cut(s) 302, 473, 761, 1032, 1521, 1826
Esp3I CGTCTC 2 cut(s) 2, 54
FalI AAGNNNNNCTT 4 cut(s) 269, 301, 1214, 1246
FaqI GGGAC 4 cut(s) 674, 1126, 1220, 2321
FauNDI CATATG 1 cut(s) 2287
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 1433
Fnu4HI GCNGC 7 cut(s) 335, 481, 617, 1334, 1371, 1539, 1908
FokI GGATG 8 cut(s) 83, 149, 1259, 1383, 1703, 1879, 1981, 2192
FriOI GRGCYC 1 cut(s) 1530
Fsp4HI GCNGC 7 cut(s) 335, 481, 617, 1334, 1371, 1539, 1908
FspBI CTAG 7 cut(s) 438, 474, 767, 881, 911, 1743, 2216
GlaI GCGC 2 cut(s) 479, 1559
GluI GCNGC 7 cut(s) 335, 481, 617, 1334, 1371, 1539, 1908
GsaI CCCAGC 2 cut(s) 104, 1246
HaeII RGCGCY 2 cut(s) 481, 1561
HaeIII GGCC 8 cut(s) 442, 925, 960, 1031, 1171, 1195, 1803, 1834
HapII CCGG 3 cut(s) 183, 1254, 1896
HgaI GACGC 1 cut(s) 1748
HhaI GCGC 2 cut(s) 480, 1560
Hin1I GRCGYC 1 cut(s) 493
Hin6I GCGC 2 cut(s) 478, 1558
HinP1I GCGC 2 cut(s) 478, 1558
HindIII AAGCTT 1 cut(s) 1572
HinfI GANTC 7 cut(s) 692, 968, 1301, 1339, 1485, 2065, 2334
HpaII CCGG 3 cut(s) 183, 1254, 1896
HphI GGTGA 8 cut(s) 85, 172, 262, 1217, 1497, 1720, 1900, 2106
Hpy166II GTNNAC 7 cut(s) 497, 938, 1090, 1434, 1782, 1915, 1929
Hpy188III TCNNGA 9 cut(s) 166, 422, 594, 659, 1015, 1067, 1298, 1460, 1763
Hpy8I GTNNAC 7 cut(s) 497, 938, 1090, 1434, 1782, 1915, 1929
HpyAV CCTTC 4 cut(s) 16, 701, 766, 1103
HpyCH4III ACNGT 4 cut(s) 833, 1021, 2080, 2204
HpyCH4IV ACGT 2 cut(s) 63, 493
HpyF10VI GCNNNNNNNGC 7 cut(s) 343, 625, 634, 1256, 1270, 1580, 1831
HpyF3I CTNAG 8 cut(s) 320, 592, 633, 723, 948, 1152, 1166, 1529
HpySE526I ACGT 2 cut(s) 63, 493
Hsp92I GRCGYC 1 cut(s) 493
HspAI GCGC 2 cut(s) 478, 1558
Ksp22I TGATCA 1 cut(s) 1759
LmnI GCTCC 7 cut(s) 122, 331, 633, 1525, 1765, 2146, 2270
Lsp1109I GCAGC 7 cut(s) 321, 467, 603, 1320, 1382, 1525, 1919
LweI GCATC 5 cut(s) 105, 1237, 1405, 1681, 2170
MaeI CTAG 7 cut(s) 438, 474, 767, 881, 911, 1743, 2216
MaeII ACGT 2 cut(s) 63, 493
MaeIII GTNAC 4 cut(s) 1205, 1348, 1888, 2320
MfeI CAATTG 2 cut(s) 1200, 1647
MflI RGATCY 3 cut(s) 1615, 1855, 1990
MhlI GDGCHC 4 cut(s) 42, 147, 1297, 1530
MlsI TGGCCA 2 cut(s) 925, 1834
MluCI AATT 9 cut(s) 340, 839, 863, 1104, 1200, 1365, 1647, 1881, 2223
MluNI TGGCCA 2 cut(s) 925, 1834
MlyI GAGTC 4 cut(s) 1295, 1333, 1494, 2343
MmeI TCCRAC 1 cut(s) 2248
Mox20I TGGCCA 2 cut(s) 925, 1834
Mph1103I ATGCAT 2 cut(s) 1398, 2185
MroXI GAANNNNTTC 1 cut(s) 2303
MscI TGGCCA 2 cut(s) 925, 1834
MseI TTAA 8 cut(s) 702, 891, 915, 1473, 1698, 1752, 2207, 2229
MslI CAYNNNNRTG 5 cut(s) 246, 539, 1290, 2188, 2327
Msp20I TGGCCA 2 cut(s) 925, 1834
MspI CCGG 3 cut(s) 183, 1254, 1896
MspR9I CCNGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
MunI CAATTG 2 cut(s) 1200, 1647
Mva1269I GAATGC 1 cut(s) 2183
MvaI CCWGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
MwoI GCNNNNNNNGC 7 cut(s) 343, 625, 634, 1256, 1270, 1580, 1831
NcoI CCATGG 2 cut(s) 1521, 1826
NdeI CATATG 1 cut(s) 2287
NlaIV GGNNCC 6 cut(s) 513, 961, 1114, 1258, 1617, 2148
NmeAIII GCCGAG 2 cut(s) 850, 1171
NmuCI GTSAC 4 cut(s) 1205, 1348, 1888, 2320
NsiI ATGCAT 2 cut(s) 1398, 2185
NspI RCATGY 1 cut(s) 1981
OliI CACNNNNGTG 1 cut(s) 539
PaeR7I CTCGAG 1 cut(s) 1458
PagI TCATGA 3 cut(s) 1014, 1066, 1297
PceI AGGCCT 2 cut(s) 1031, 1171
PctI GAATGC 1 cut(s) 2183
PdmI GAANNNNTTC 1 cut(s) 2303
PfeI GAWTC 3 cut(s) 692, 968, 2065
PflMI CCANNNNNTGG 1 cut(s) 1202
PinAI ACCGGT 1 cut(s) 1253
PkrI GCNGC 7 cut(s) 336, 482, 618, 1335, 1372, 1540, 1909
PleI GAGTC 4 cut(s) 1295, 1333, 1493, 2342
PpsI GAGTC 4 cut(s) 1295, 1333, 1493, 2342
PpuMI RGGWCCY 1 cut(s) 511
PshAI GACNNNNGTC 1 cut(s) 1743
PshBI ATTAAT 1 cut(s) 2229
PsiI TTATAA 2 cut(s) 246, 2174
Psp124BI GAGCTC 1 cut(s) 1530
Psp5II RGGWCCY 1 cut(s) 511
Psp6I CCWGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
PspFI CCCAGC 2 cut(s) 100, 1242
PspGI CCWGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
PspN4I GGNNCC 6 cut(s) 513, 961, 1114, 1258, 1617, 2148
PspPI GGNCC 3 cut(s) 511, 959, 1113
PspPPI RGGWCCY 1 cut(s) 511
PstI CTGCAG 1 cut(s) 485
PsuI RGATCY 3 cut(s) 1615, 1855, 1990
RsaI GTAC 3 cut(s) 220, 1517, 1928
RsaNI GTAC 3 cut(s) 219, 1516, 1927
RseI CAYNNNNRTG 5 cut(s) 246, 539, 1290, 2188, 2327
SacI GAGCTC 1 cut(s) 1530
SaqAI TTAA 8 cut(s) 702, 891, 915, 1473, 1698, 1752, 2207, 2229
SatI GCNGC 7 cut(s) 335, 481, 617, 1334, 1371, 1539, 1908
Sau96I GGNCC 3 cut(s) 511, 959, 1113
ScaI AGTACT 1 cut(s) 1517
SchI GAGTC 4 cut(s) 1295, 1333, 1494, 2343
ScrFI CCNGG 6 cut(s) 226, 449, 1261, 1454, 1509, 2316
SduI GDGCHC 4 cut(s) 42, 147, 1297, 1530
SfaNI GCATC 5 cut(s) 105, 1237, 1405, 1681, 2170
SfcI CTRYAG 2 cut(s) 481, 1620
Sfr274I CTCGAG 1 cut(s) 1458
SgrAI CRCCGGYG 1 cut(s) 1253
SinI GGWCC 2 cut(s) 511, 1113
SlaI CTCGAG 1 cut(s) 1458
SmiMI CAYNNNNRTG 5 cut(s) 246, 539, 1290, 2188, 2327
SmlI CTYRAG 2 cut(s) 638, 1458
SmoI CTYRAG 2 cut(s) 638, 1458
Sse9I AATT 9 cut(s) 340, 839, 863, 1104, 1200, 1365, 1647, 1881, 2223
SseBI AGGCCT 2 cut(s) 1031, 1171
SsiI CCGC 2 cut(s) 1336, 1482
SspMI CTAG 7 cut(s) 438, 474, 767, 881, 911, 1743, 2216
SstI GAGCTC 1 cut(s) 1530
StuI AGGCCT 2 cut(s) 1031, 1171
StyD4I CCNGG 6 cut(s) 224, 447, 1259, 1452, 1507, 2314
StyI CCWWGG 6 cut(s) 302, 473, 761, 1032, 1521, 1826
TaaI ACNGT 4 cut(s) 833, 1021, 2080, 2204
TaiI ACGT 2 cut(s) 66, 496
TaqI TCGA 5 cut(s) 174, 1459, 1969, 2105, 2187
TasI AATT 9 cut(s) 340, 839, 863, 1104, 1200, 1365, 1647, 1881, 2223
TatI WGTACW 2 cut(s) 1515, 1926
TfiI GAWTC 3 cut(s) 692, 968, 2065
Tru1I TTAA 8 cut(s) 702, 891, 915, 1473, 1698, 1752, 2207, 2229
Tru9I TTAA 8 cut(s) 702, 891, 915, 1473, 1698, 1752, 2207, 2229
TscAI CASTG 9 cut(s) 508, 544, 787, 933, 1156, 1334, 1709, 1917, 2085
TseFI GTSAC 4 cut(s) 1205, 1348, 1888, 2320
TseI GCWGC 7 cut(s) 334, 480, 616, 1333, 1370, 1538, 1907
Tsp45I GTSAC 4 cut(s) 1205, 1348, 1888, 2320
TspDTI ATGAA 9 cut(s) 221, 573, 684, 705, 720, 873, 1003, 1821, 1853
TspRI CASTG 9 cut(s) 508, 544, 787, 933, 1156, 1334, 1709, 1917, 2085
Van91I CCANNNNNTGG 1 cut(s) 1202
VpaK11BI GGWCC 2 cut(s) 511, 1113
VspI ATTAAT 1 cut(s) 2229
XagI CCTNNNNNAGG 1 cut(s) 472
XapI RAATTY 3 cut(s) 340, 839, 863
XceI RCATGY 1 cut(s) 1981
XhoI CTCGAG 1 cut(s) 1458
XmaJI CCTAGG 1 cut(s) 473
XmiI GTMKAC 1 cut(s) 1433
XmnI GAANNNNTTC 1 cut(s) 2303
XspI CTAG 7 cut(s) 438, 474, 767, 881, 911, 1743, 2216
ZraI GACGTC 1 cut(s) 494
ZrmI AGTACT 1 cut(s) 1517
Zsp2I ATGCAT 2 cut(s) 1398, 2185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.