RLG00000002526

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
35733562 .. 35739340
5779 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002526

Sequence Viewer

Length: 2703 bp
ATGACGATCAACTCTCTGCTGCAAAAACCGACCTCCTCCTCCTCCTCCTTCTCCTCCTCTTTGCCCATAACAAATACAAAAAATAGCATTCTTGCCGCTACTGTTGAGGTTGAAGAACCTGAAGCCGCACTGATGAATACTACGGGAAGCCTGCTCTCCAACTTGTTTGGTTTGACAGCACCCCTCGATCTTTTCAGTGATTTGCTCGGGAAAACCTTTCTTCTTGAGCTGGTTAGCACCGAGCTTGACCCTGAAACTGGTTTGGAGAAGAAACCAATCCAGGGATATGCGCACAAAGTGACCAGAATTGACGACGAGGTGAATTATGAGAGCTCCTTCACCCTCCCAGCGGGTTTCGGAGAGGTGGGAGCTGTTCTGTTTGAAAATCAGCACCACGAGGAGCTTTACATCAAGACCGTACATTTACACATCAATGGCTTCCCAGAACCTTTTGTGGTTACTGTCCCTTGTGATTCATGGGCTCACTCCAAGTATGTCAATCCAGACAAGAGAATCTTCTTCACCAGCAAGTCTTACTTACCATCGGAGACACCAAGTGGGTTGAAGAGGCTAAGAGAACTGGAGCTGCAATATTTGCGAGGAAATGGGGAGGGTGAAAGAAAAATGTCCGATAGAATTTATGATTATGATACATACAATGATCTTGGAAATCCGGATAGCAAAGACGAACTGGCTAGGCCCGTGCTTGGCGGCAAAGAGCATCCATACCCAAGGCGCTGCAGAACAGGACGACCACGCACCAAAAAGGATCCCTTATCGGAGGAAAGAAGCAGCAGTGTGTATGTACCAAGAGATGAAGCTTTCGCAGAGGTGAAACAACTGACATTTGCGGCAAAGACCCTGAAATCCGTGCTGCACGCATTGCTCCCGCAGCTTGAGATGTCACTTATTAATCCAAACCTAGGTTTTCCCTACTTCACAGCCATAGATTCGCTGTTTAATGAAGGAGTCACAATGCCTAAGCCAAAAACTAGTGGGCTTTTTCAGTCCATCATCCCAAGGCTGGTCAAGGCTGTTAGTGATAGCCAAGACGATCTTTTACTCTTTGAGACCCCTGAAATAATTGATCTTATGCCTCCTCGGCCTCAACCTGTCATATATGCAACTCGTTTATTGCTAACTCTTGATTACGTATTCTTTGACTGGAAATTAGCAGGTGATAAATTTTCCTGGTTTAGAGATGAAGAATTTTCTCGGCAAACTCTAGCTGGTCTTAATCCATTTAGTATAGAGCTAGTTAAGGAGTGGCCATTGAAAAGTAAACTTGACCCCAAGATTTATGGTCCAGCTGAATCATTGATCACAACAGAACTTGTGGAGAAAGAAATCAGAGGTTGTATGACTGTCAATGAGGCCATGAAAAGAAAGAAGATGTTTATGTTGGATTATCATGATTTGCTCATGCCTTATGTAAACAAAGTGAGAGAGATTGAAGGGACCACATTGTATGGTTCTAGGACACTGTTCTTCCTCACTGAAGAAGGCACATTGAGGCTTGTTGCCATTGAACTAACTCGCCCTCCTGTTGGTGACAAGCCACAATGGAAGCAAGTATTTACTCCTACCTGGGATGCCACTGGATGCTGGCTGTGGAGACTCGCTAAAGCGCATGTTTGTGCTCATGATGCTGGCTATCATCAGCTTGTCAACCACTGGCTGAGAACTCATTGTTGTACGGAGCCATACATAATTGCCGCCAATCGCCAGTTAAGTAGAATGCATCCCATCTATAGACTTCTACTTCCTCATTTTCGGTACACAGTGGAAATCAATGCCCTGGCTCGAGAAAGCCTCATCAATGCAGGTGGAATCATTGAGACCTCCTTCTCACCGGCAAAGTACTCCATTGAGCTCAGTTCAGCTGCTTATGACAAGTTCTGGCGCTTTGACACGGAAGCTTTGCCTGCAGATTTGATCAGAAGGGGAATGGCAGTTGAGGATCCCACGGCTGAGCATGGCTTAAAGCTAACAATTGAAGACTACCCATTTGCAAATGATGGTCTCATTCTTTGGGATGCCATTAAGGAGTGGGTGAGGGACTATGTGAACCACTACTATCCAGACCCAACTCAAGTTGAGAATGATCCAGAGCTTCAAGCTTGGTGGACAGAAGTTAGAACGAAAGGCCATGCTGACAAAAAGGATGAGCCATGGTGGCCAGTGCTGAATACCCCAGATAACCTAATACATGTTTTGACAACTATAATTTGGGTAACAGCTGGTCATCATGCAGCAGTAAACTTTGGCCAGTATATGTATGCCGGATACTTCCCAAACCGACCTACAATAGCTCGAACCAACATGCCAACTGAAGATCCATCTGAGGAGTATTTCAACAACTTTTTGAAGAAGCCGGAGTCTGCATTGCTAATGTGCTTCCCCTCACAGATTCAAGCAACCAAAGTGATGGCTGTGTTAGACGTGTTATTGAACCATTCACCTGATGAGGAGTATCTTGGTGAGAATATGGAGTCCTCTTGGGGTGAAAATCCTGTCATCAAGGCTGCATTTGAGCGCTTCAATGGGAATTTGAAGAAGCTAGAAGCAATAATTGATGAGCGGAATACTAATATGAACCTGAAAAACAGAGTTGGAGCAGGGGTGGTTCCATATGAGCTTTTGAAGCCATTTTCAAAACCTGGGGTCACAGGAATGGGAGTACCTAATAGCATCTCAATCTGA

Protein Analysis

901

Amino Acids

102.31

Weight (kDa)

5.57

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipoxygenase PF00305 187 - 363 6.4e-58 Lipoxygenase
Lipoxygenase PF00305 392 - 883 3.4e-255 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1166, 1814
Acc16I TGCGCA 1 cut(s) 291
Acc36I ACCTGC 2 cut(s) 1166, 1814
AccBSI CCGCTC 1 cut(s) 2581
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 8 cut(s) 96, 126, 350, 711, 851, 890, 1716, 2581
AclWI GGATC 6 cut(s) 764, 777, 1955, 1968, 2099, 2330
AcoI YGGCCR 3 cut(s) 1268, 2177, 2266
AcsI RAATTY 4 cut(s) 636, 1184, 1208, 2548
AcuI CTGAAG 3 cut(s) 141, 1518, 2352
AdeI CACNNNGTG 2 cut(s) 298, 557
AfaI GTAC 6 cut(s) 420, 807, 1696, 1778, 1862, 2682
AfeI AGCGCT 1 cut(s) 2537
AfiI CCNNNNNNNGG 7 cut(s) 257, 281, 349, 707, 923, 1024, 1547
AflIII ACRYGT 2 cut(s) 2209, 2442
AhlI ACTAGT 1 cut(s) 992
AjiI CACGTC 1 cut(s) 2443
AjnI CCWGG 5 cut(s) 279, 1190, 1586, 1797, 2659
Alw21I GWGCWC 3 cut(s) 335, 1642, 1875
Alw26I GTCTC 5 cut(s) 542, 1064, 1609, 1832, 2027
AlwI GGATC 6 cut(s) 764, 777, 1955, 1968, 2099, 2330
Ama87I CYCGRG 2 cut(s) 206, 1803
Aor13HI TCCGGA 1 cut(s) 673
Aor51HI AGCGCT 1 cut(s) 2537
AoxI GGCC 7 cut(s) 698, 1103, 1268, 1374, 2146, 2177, 2266
ApeKI GCWGC 9 cut(s) 19, 586, 738, 792, 874, 892, 1883, 2252, 2525
ApoI RAATTY 4 cut(s) 636, 1184, 1208, 2548
ArsI GACNNNNNNTTYG 2 cut(s) 1991, 2023
AseI ATTAAT 1 cut(s) 912
AspA2I CCTAGG 1 cut(s) 922
AspLEI GCGC 5 cut(s) 292, 738, 1630, 1905, 2538
AspS9I GGNCC 3 cut(s) 699, 1304, 1458
AvaI CYCGRG 2 cut(s) 206, 1803
AvaII GGWCC 2 cut(s) 1304, 1458
AvrII CCTAGG 1 cut(s) 922
BalI TGGCCA 3 cut(s) 1270, 2179, 2268
BamHI GGATCC 2 cut(s) 769, 1960
BanII GRGCYC 3 cut(s) 335, 484, 1875
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 2004
Bbv12I GWGCWC 3 cut(s) 335, 1642, 1875
BbvI GCAGC 9 cut(s) 6, 573, 725, 804, 861, 904, 1870, 2264, 2512
BccI CCATC 6 cut(s) 550, 1019, 1754, 2012, 2347, 2422
BceAI ACGGC 1 cut(s) 1983
BciT130I CCWGG 5 cut(s) 281, 1192, 1588, 1799, 2661
BciVI GTATCC 1 cut(s) 2279
BclI TGATCA 2 cut(s) 1320, 1935
BcoDI GTCTC 5 cut(s) 542, 1064, 1609, 1832, 2027
BcuI ACTAGT 1 cut(s) 992
BfaI CTAG 7 cut(s) 696, 923, 993, 1226, 1256, 1476, 2561
BfmI CTRYAG 3 cut(s) 739, 1750, 1926
BfoI RGCGCY 3 cut(s) 739, 1906, 2539
BfuAI ACCTGC 2 cut(s) 1166, 1814
BfuI GTATCC 1 cut(s) 2279
BglI GCCNNNNNGGC 2 cut(s) 1102, 2176
BlnI CCTAGG 1 cut(s) 922
BlpI GCTNAGC 1 cut(s) 1971
BmcAI AGTACT 1 cut(s) 1862
Bme1390I CCNGG 5 cut(s) 281, 1192, 1588, 1799, 2661
Bme18I GGWCC 2 cut(s) 1304, 1458
BmeT110I CYCGRG 2 cut(s) 206, 1803
BmgBI CACGTC 1 cut(s) 2443
BmgT120I GGNCC 3 cut(s) 699, 1304, 1458
BmiI GGNNCC 5 cut(s) 771, 1459, 1701, 1962, 2628
BmrFI CCNGG 5 cut(s) 281, 1192, 1588, 1799, 2661
BmsI GCATC 6 cut(s) 730, 1582, 1592, 1636, 1750, 2026
BpiI GAAGAC 1 cut(s) 2004
BplI GAGNNNNNCTC 2 cut(s) 1797, 1829
BpmI CTGGAG 1 cut(s) 602
Bpu10I CCTNAGC 1 cut(s) 981
Bpu1102I GCTNAGC 1 cut(s) 1971
BpuEI CTTGAG 3 cut(s) 245, 917, 2076
BsaAI YACGTR 1 cut(s) 1153
BsaI GGTCTC 3 cut(s) 1064, 1832, 2027
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 4 cut(s) 1525, 1555, 2607, 2637
Bsc4I CCNNNNNNNGG 7 cut(s) 257, 281, 349, 707, 923, 1024, 1547
Bse118I RCCGGY 1 cut(s) 1852
Bse1I ACTGG 9 cut(s) 262, 585, 696, 1169, 1603, 1679, 1726, 2180, 2269
Bse3DI GCAATG 2 cut(s) 881, 2384
BseAI TCCGGA 1 cut(s) 673
BseBI CCWGG 5 cut(s) 281, 1192, 1588, 1799, 2661
BseGI GGATG 7 cut(s) 721, 1014, 1597, 1607, 1741, 2041, 2170
BseLI CCNNNNNNNGG 7 cut(s) 257, 281, 349, 707, 923, 1024, 1547
BseMI GCAATG 2 cut(s) 881, 2384
BseMII CTCAG 4 cut(s) 1670, 1888, 1962, 2334
BseNI ACTGG 9 cut(s) 262, 585, 696, 1169, 1603, 1679, 1726, 2180, 2269
BseXI GCAGC 9 cut(s) 6, 573, 725, 804, 861, 904, 1870, 2264, 2512
BseYI CCCAGC 1 cut(s) 346
BsgI GTGCAG 1 cut(s) 860
BshFI GGCC 7 cut(s) 700, 1105, 1270, 1376, 2148, 2179, 2268
BsiHKAI GWGCWC 3 cut(s) 335, 1642, 1875
BsiHKCI CYCGRG 2 cut(s) 206, 1803
BsiSI CCGG 4 cut(s) 674, 1853, 2283, 2375
BslFI GGGAC 3 cut(s) 449, 1471, 2072
BslI CCNNNNNNNGG 7 cut(s) 257, 281, 349, 707, 923, 1024, 1547
BsmAI GTCTC 5 cut(s) 542, 1064, 1609, 1832, 2027
BsmFI GGGAC 3 cut(s) 449, 1471, 2072
BsmI GAATGC 2 cut(s) 87, 1743
BsnI GGCC 7 cut(s) 700, 1105, 1270, 1376, 2148, 2179, 2268
Bso31I GGTCTC 3 cut(s) 1064, 1832, 2027
BsoBI CYCGRG 2 cut(s) 206, 1803
Bsp1286I GDGCHC 4 cut(s) 335, 484, 1642, 1875
Bsp13I TCCGGA 1 cut(s) 673
Bsp1720I GCTNAGC 1 cut(s) 1971
Bsp19I CCATGG 1 cut(s) 2171
BspACI CCGC 8 cut(s) 96, 126, 350, 711, 851, 890, 1716, 2581
BspANI GGCC 7 cut(s) 700, 1105, 1270, 1376, 2148, 2179, 2268
BspCNI CTCAG 4 cut(s) 1671, 1887, 1963, 2335
BspEI TCCGGA 1 cut(s) 673
BspHI TCATGA 2 cut(s) 1411, 1642
BspLI GGNNCC 5 cut(s) 771, 1459, 1701, 1962, 2628
BspMAI CTGCAG 2 cut(s) 743, 1930
BspMI ACCTGC 2 cut(s) 1166, 1814
BspPI GGATC 6 cut(s) 764, 777, 1955, 1968, 2099, 2330
BspTNI GGTCTC 3 cut(s) 1064, 1832, 2027
BsrBI CCGCTC 1 cut(s) 2581
BsrDI GCAATG 2 cut(s) 881, 2384
BsrFI RCCGGY 1 cut(s) 1852
BsrI ACTGG 9 cut(s) 262, 585, 696, 1169, 1603, 1679, 1726, 2180, 2269
BssAI RCCGGY 1 cut(s) 1852
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 4 cut(s) 731, 922, 1019, 2171
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 5 cut(s) 281, 1192, 1588, 1799, 2661
Bst4CI ACNGT 6 cut(s) 103, 418, 463, 1366, 1485, 1783
Bst6I CTCTTC 1 cut(s) 560
BstAPI GCANNNNNTGC 2 cut(s) 595, 883
BstBAI YACGTR 1 cut(s) 1153
BstC8I GCNNGC 5 cut(s) 152, 879, 1607, 1651, 1926
BstDEI CTNAG 6 cut(s) 572, 981, 1679, 1874, 1971, 2343
BstDSI CCRYGG 2 cut(s) 1965, 2171
BstF5I GGATG 7 cut(s) 721, 1014, 1597, 1607, 1741, 2041, 2170
BstH2I RGCGCY 3 cut(s) 739, 1906, 2539
BstHHI GCGC 5 cut(s) 292, 738, 1630, 1905, 2538
BstMAI GTCTC 5 cut(s) 542, 1064, 1609, 1832, 2027
BstMWI GCNNNNNNNGC 8 cut(s) 595, 883, 892, 1102, 1646, 1925, 2176, 2644
BstNI CCWGG 5 cut(s) 281, 1192, 1588, 1799, 2661
BstNSI RCATGY 3 cut(s) 1634, 2213, 2326
BstSCI CCNGG 5 cut(s) 279, 1190, 1586, 1797, 2659
BstSFI CTRYAG 3 cut(s) 739, 1750, 1926
BstSNI TACGTA 1 cut(s) 1153
BstV1I GCAGC 9 cut(s) 6, 573, 725, 804, 861, 904, 1870, 2264, 2512
BstV2I GAAGAC 1 cut(s) 2004
BstX2I RGATCY 3 cut(s) 769, 1960, 2335
BstXI CCANNNNNNTGG 1 cut(s) 2428
BstYI RGATCY 3 cut(s) 769, 1960, 2335
BsuI GTATCC 1 cut(s) 2279
BsuRI GGCC 7 cut(s) 700, 1105, 1270, 1376, 2148, 2179, 2268
BtgI CCRYGG 2 cut(s) 1965, 2171
BtrI CACGTC 1 cut(s) 2443
BtsCI GGATG 7 cut(s) 721, 1014, 1597, 1607, 1741, 2041, 2170
BtsI GCAGTG 1 cut(s) 802
BtsIMutI CAGTG 9 cut(s) 128, 202, 802, 1481, 1494, 1596, 1672, 1788, 2187
BveI ACCTGC 2 cut(s) 1166, 1814
Cac8I GCNNGC 5 cut(s) 152, 879, 1607, 1651, 1926
CciI TCATGA 2 cut(s) 1411, 1642
CfoI GCGC 5 cut(s) 292, 738, 1630, 1905, 2538
Cfr10I RCCGGY 1 cut(s) 1852
Cfr13I GGNCC 3 cut(s) 699, 1304, 1458
Csp6I GTAC 6 cut(s) 419, 806, 1695, 1777, 1861, 2681
CspCI CAANNNNNGTGG 4 cut(s) 1807, 1842, 2105, 2140
CviQI GTAC 6 cut(s) 419, 806, 1695, 1777, 1861, 2681
DdeI CTNAG 6 cut(s) 572, 981, 1679, 1874, 1971, 2343
DraIII CACNNNGTG 2 cut(s) 298, 557
EaeI YGGCCR 3 cut(s) 1268, 2177, 2266
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
Ecl136II GAGCTC 2 cut(s) 333, 1873
Eco105I TACGTA 1 cut(s) 1153
Eco130I CCWWGG 4 cut(s) 731, 922, 1019, 2171
Eco24I GRGCYC 3 cut(s) 335, 484, 1875
Eco31I GGTCTC 3 cut(s) 1064, 1832, 2027
Eco47I GGWCC 2 cut(s) 1304, 1458
Eco47III AGCGCT 1 cut(s) 2537
Eco53kI GAGCTC 2 cut(s) 333, 1873
Eco57I CTGAAG 3 cut(s) 141, 1518, 2352
Eco88I CYCGRG 2 cut(s) 206, 1803
EcoICRI GAGCTC 2 cut(s) 333, 1873
EcoRII CCWGG 5 cut(s) 279, 1190, 1586, 1797, 2659
EcoT14I CCWWGG 4 cut(s) 731, 922, 1019, 2171
EcoT22I ATGCAT 1 cut(s) 1743
EcoT38I GRGCYC 3 cut(s) 335, 484, 1875
ErhI CCWWGG 4 cut(s) 731, 922, 1019, 2171
FalI AAGNNNNNCTT 8 cut(s) 500, 532, 521, 553, 758, 790, 1041, 1073
FaqI GGGAC 3 cut(s) 449, 1471, 2072
FauI CCCGC 2 cut(s) 343, 897
FauNDI CATATG 1 cut(s) 2632
FbaI TGATCA 2 cut(s) 1320, 1935
FokI GGATG 7 cut(s) 708, 1001, 1604, 1614, 1728, 2048, 2177
FriOI GRGCYC 3 cut(s) 335, 484, 1875
FspAI RTGCGCAY 1 cut(s) 291
FspBI CTAG 7 cut(s) 696, 923, 993, 1226, 1256, 1476, 2561
FspI TGCGCA 1 cut(s) 291
GlaI GCGC 5 cut(s) 291, 737, 1629, 1904, 2537
GsaI CCCAGC 1 cut(s) 350
GsuI CTGGAG 1 cut(s) 602
HaeII RGCGCY 3 cut(s) 739, 1906, 2539
HaeIII GGCC 7 cut(s) 700, 1105, 1270, 1376, 2148, 2179, 2268
HapII CCGG 4 cut(s) 674, 1853, 2283, 2375
HhaI GCGC 5 cut(s) 292, 738, 1630, 1905, 2538
Hin6I GCGC 5 cut(s) 290, 736, 1628, 1903, 2536
HinP1I GCGC 5 cut(s) 290, 736, 1628, 1903, 2536
HincII GTYRAC 1 cut(s) 1669
HindII GTYRAC 1 cut(s) 1669
HindIII AAGCTT 3 cut(s) 819, 1917, 2118
HpaII CCGG 4 cut(s) 674, 1853, 2283, 2375
Hpy166II GTNNAC 7 cut(s) 1283, 1435, 1669, 1779, 2068, 2127, 2260
Hpy188I TCNGA 8 cut(s) 359, 547, 631, 781, 1352, 1940, 2344, 2702
Hpy8I GTNNAC 7 cut(s) 1283, 1435, 1669, 1779, 2068, 2127, 2260
Hpy99I CGWCG 1 cut(s) 317
HpyAV CCTTC 7 cut(s) 58, 346, 959, 1448, 1496, 1855, 1935
HpyCH4III ACNGT 6 cut(s) 103, 418, 463, 1366, 1485, 1783
HpyCH4IV ACGT 2 cut(s) 1152, 2442
HpyF10VI GCNNNNNNNGC 8 cut(s) 595, 883, 892, 1102, 1646, 1925, 2176, 2644
HpyF3I CTNAG 6 cut(s) 572, 981, 1679, 1874, 1971, 2343
HpySE526I ACGT 2 cut(s) 1152, 2442
HspAI GCGC 5 cut(s) 290, 736, 1628, 1903, 2536
Kpn2I TCCGGA 1 cut(s) 673
Ksp22I TGATCA 2 cut(s) 1320, 1935
LmnI GCTCC 7 cut(s) 338, 368, 400, 583, 891, 1699, 2615
Lsp1109I GCAGC 9 cut(s) 6, 573, 725, 804, 861, 904, 1870, 2264, 2512
LweI GCATC 6 cut(s) 730, 1582, 1592, 1636, 1750, 2026
MaeI CTAG 7 cut(s) 696, 923, 993, 1226, 1256, 1476, 2561
MaeII ACGT 2 cut(s) 1152, 2442
MaeIII GTNAC 7 cut(s) 298, 457, 903, 970, 1550, 2233, 2665
MbiI CCGCTC 1 cut(s) 2581
MfeI CAATTG 1 cut(s) 1992
MflI RGATCY 3 cut(s) 769, 1960, 2335
MhlI GDGCHC 4 cut(s) 335, 484, 1642, 1875
MlsI TGGCCA 3 cut(s) 1270, 2179, 2268
MluNI TGGCCA 3 cut(s) 1270, 2179, 2268
MlyI GAGTC 4 cut(s) 978, 1611, 2387, 2501
MmeI TCCRAC 3 cut(s) 183, 1383, 2593
Mox20I TGGCCA 3 cut(s) 1270, 2179, 2268
Mph1103I ATGCAT 1 cut(s) 1743
MroI TCCGGA 1 cut(s) 673
MscI TGGCCA 3 cut(s) 1270, 2179, 2268
MseI TTAA 7 cut(s) 912, 960, 1236, 1260, 1730, 1982, 2043
MslI CAYNNNNRTG 3 cut(s) 432, 1635, 2672
Msp20I TGGCCA 3 cut(s) 1270, 2179, 2268
MspA1I CMGCKG 4 cut(s) 350, 1310, 1883, 2240
MspI CCGG 4 cut(s) 674, 1853, 2283, 2375
MspR9I CCNGG 5 cut(s) 281, 1192, 1588, 1799, 2661
MunI CAATTG 1 cut(s) 1992
Mva1269I GAATGC 2 cut(s) 87, 1743
MvaI CCWGG 5 cut(s) 281, 1192, 1588, 1799, 2661
MwoI GCNNNNNNNGC 8 cut(s) 595, 883, 892, 1102, 1646, 1925, 2176, 2644
NcoI CCATGG 1 cut(s) 2171
NdeI CATATG 1 cut(s) 2632
NlaIV GGNNCC 5 cut(s) 771, 1459, 1701, 1962, 2628
NmeAIII GCCGAG 2 cut(s) 1081, 1195
NmuCI GTSAC 5 cut(s) 298, 903, 970, 1550, 2665
NsbI TGCGCA 1 cut(s) 291
NsiI ATGCAT 1 cut(s) 1743
NspI RCATGY 3 cut(s) 1634, 2213, 2326
PaeR7I CTCGAG 1 cut(s) 1803
PagI TCATGA 2 cut(s) 1411, 1642
PaqCI CACCTGC 2 cut(s) 1166, 1814
PciI ACATGT 1 cut(s) 2209
PctI GAATGC 2 cut(s) 87, 1743
PfeI GAWTC 6 cut(s) 473, 513, 950, 1313, 1830, 2410
PleI GAGTC 4 cut(s) 977, 1611, 2386, 2500
PpsI GAGTC 4 cut(s) 977, 1611, 2386, 2500
Ppu21I YACGTR 1 cut(s) 1153
PscI ACATGT 1 cut(s) 2209
PshBI ATTAAT 1 cut(s) 912
Psp124BI GAGCTC 2 cut(s) 335, 1875
Psp6I CCWGG 5 cut(s) 279, 1190, 1586, 1797, 2659
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 5 cut(s) 279, 1190, 1586, 1797, 2659
PspN4I GGNNCC 5 cut(s) 771, 1459, 1701, 1962, 2628
PspPI GGNCC 3 cut(s) 699, 1304, 1458
PstI CTGCAG 2 cut(s) 743, 1930
PsuI RGATCY 3 cut(s) 769, 1960, 2335
PvuII CAGCTG 3 cut(s) 1310, 1883, 2240
RsaI GTAC 6 cut(s) 420, 807, 1696, 1778, 1862, 2682
RsaNI GTAC 6 cut(s) 419, 806, 1695, 1777, 1861, 2681
RseI CAYNNNNRTG 3 cut(s) 432, 1635, 2672
SacI GAGCTC 2 cut(s) 335, 1875
SaqAI TTAA 7 cut(s) 912, 960, 1236, 1260, 1730, 1982, 2043
Sau96I GGNCC 3 cut(s) 699, 1304, 1458
ScaI AGTACT 1 cut(s) 1862
SchI GAGTC 4 cut(s) 978, 1611, 2387, 2501
ScrFI CCNGG 5 cut(s) 281, 1192, 1588, 1799, 2661
SduI GDGCHC 4 cut(s) 335, 484, 1642, 1875
SfaNI GCATC 6 cut(s) 730, 1582, 1592, 1636, 1750, 2026
SfcI CTRYAG 3 cut(s) 739, 1750, 1926
Sfr274I CTCGAG 1 cut(s) 1803
SinI GGWCC 2 cut(s) 1304, 1458
SlaI CTCGAG 1 cut(s) 1803
SmiMI CAYNNNNRTG 3 cut(s) 432, 1635, 2672
SmlI CTYRAG 4 cut(s) 224, 896, 1803, 2091
SmoI CTYRAG 4 cut(s) 224, 896, 1803, 2091
SnaBI TACGTA 1 cut(s) 1153
SpeI ACTAGT 1 cut(s) 992
SsiI CCGC 8 cut(s) 96, 126, 350, 711, 851, 890, 1716, 2581
SspI AATATT 1 cut(s) 593
SspMI CTAG 7 cut(s) 696, 923, 993, 1226, 1256, 1476, 2561
SstI GAGCTC 2 cut(s) 335, 1875
StyD4I CCNGG 5 cut(s) 279, 1190, 1586, 1797, 2659
StyI CCWWGG 4 cut(s) 731, 922, 1019, 2171
TaaI ACNGT 6 cut(s) 103, 418, 463, 1366, 1485, 1783
TaiI ACGT 2 cut(s) 1155, 2445
TaqI TCGA 3 cut(s) 186, 1804, 2314
TatI WGTACW 1 cut(s) 1860
TauI GCSGC 5 cut(s) 98, 128, 714, 854, 1718
TfiI GAWTC 6 cut(s) 473, 513, 950, 1313, 1830, 2410
Tru1I TTAA 7 cut(s) 912, 960, 1236, 1260, 1730, 1982, 2043
Tru9I TTAA 7 cut(s) 912, 960, 1236, 1260, 1730, 1982, 2043
TscAI CASTG 9 cut(s) 135, 202, 802, 1488, 1501, 1603, 1679, 1788, 2187
TseFI GTSAC 5 cut(s) 298, 903, 970, 1550, 2665
TseI GCWGC 9 cut(s) 19, 586, 738, 792, 874, 892, 1883, 2252, 2525
Tsp45I GTSAC 5 cut(s) 298, 903, 970, 1550, 2665
TspDTI ATGAA 7 cut(s) 149, 465, 831, 978, 1218, 1394, 2609
TspGWI ACGGA 3 cut(s) 859, 1712, 1928
TspRI CASTG 9 cut(s) 135, 202, 802, 1488, 1501, 1603, 1679, 1788, 2187
VpaK11BI GGWCC 2 cut(s) 1304, 1458
VspI ATTAAT 1 cut(s) 912
XapI RAATTY 4 cut(s) 636, 1184, 1208, 2548
XceI RCATGY 3 cut(s) 1634, 2213, 2326
XhoI CTCGAG 1 cut(s) 1803
XmaJI CCTAGG 1 cut(s) 922
XspI CTAG 7 cut(s) 696, 923, 993, 1226, 1256, 1476, 2561
ZrmI AGTACT 1 cut(s) 1862
Zsp2I ATGCAT 1 cut(s) 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.