FvH4_7g00420

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
1034733 .. 1037759
3027 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g00420.t1

Sequence Viewer

Length: 1920 bp
ATGGAGCTGCGAATTTTGCGAGGAAATGGAGAGGATGAAAGAAAAAAATCAGATAGAATTTACGATTATGATAAATATAATGATCTCGGAGTTCCAGATAGCACACTAGCTAGACCAGTCCTGGGCGGCAAAGAGCTTCCATACCCTAGGCGCTGCAGAACAGGACGTCCGCGCACTGAAAAGGACCCATTATCTGAAGAAAGAAGCACTAGTGTGTATATACCAAGAGATGAAGCGTTTTCAGAGGAGAAACATCTCACATTCAACGGAAAGACACTAAAATCTGTGCTGCACGCATTGCTCCCTCAGCTAGAAGTATCACTTGACCGGAACTTGGGATTTCCGCTCTTCAAAGAAATAGATTCTTTGTTTAACGAAGGCATCGCGTTGCCTACACCCAAAACAATTGGTTTTCTAAGGTCAGTCATTCCAAGGCTAGTGAGGGCTATCAGTGATGAGCAGAAAGATCTTTTGCTCTTTGAGACTCCAGCAATGCTTGACCGTGATAAATTTTCTTGGTTCAGAGATGAAGAATTTTCTCGGCAAACTCTAGCTGGTCTTAATCCATTTAGTATTGAGCTAGTTAAGGCCTTGGAGAAAAAGAAGTTCTTTCTCTTGGATTATCATGACCTGCTCATTCCTTTAGTGAACAAAGTGAGAGAAATTGAAGGGACCACGTTGTATGGTTCTCGGACACTATTCTTTCTTACTGAGAGTGGCTGTCTGAGGCCTATTGCTATTGAACTTACTCGGCCACCAACTGGTGACAAGCCACAATGGAAGCAAGTCTTCATCCCATGCTGGGATGCCACTGGTATATGGCTATGGAGGCTTGCTAAAGCTCATGTTTGTGCTCATGACTCTGGCTATCATCAGCTTGTGATCCACTGGCTTCGGACTCACTGTGTGACAGAGCCATACATAATTGCAGCTAATCGGCAAATGAGTGCTATCCATCCCATCTATAGACTTCTTAATCCTCATTTTCGGTATACAATGGAAATAAACGCTCTGGCTCGAGAAAGCCTAATTAATGCAGGCGGAGTCATTGAGAGTAGCTTTTCACCAGGAAAGTACTCTATGGAGCTTAGTTCTGCTGCTTATGACAAACTCTGGCGCTTTGACATGGAAGCTTTGCCAGCAGATCTGATAAGAAGGGGAATGGCAGTTGAGGATCCAACGGCCAAGCAGCATGGTCTGAAGCTAACAATTGAAGACTACCCTTTTGCAAACGACGGTCTTATTCTTTGGGATGCCATTAAGAAGTGGGTGAGCGACTATGTAAATCACTACTACCAAGACGCTAGTGTTGTTGAATGTGATGAGGAGCTTCAAGGTTGGTGGACAGAAGTTAGAACTAAAGGCCATGAAGACAAAAAAGATGAGCCATGGTGGCCTGTTCTGAAAACCCAAAAAGACCTCGTTCATGTTTTGACAACAATAATTTGGGTCACATCTGGCCACCATGCAGCTGTGAACTTTGGGCAGTACACATATGCTGGATACTTTCCGAACAGACCTACAATAGCTCGAACCAACATGCCATGTGAAGATCCATCCGATGAGGCTGTCGATACTTTTATGACGAAACCCGAAACAGTACTTCTAAACTGCTTTCCCTCAAAGATTCAAGCAACAACAGTGATGGCTGTGTTAGATGTGCTATCGACACATTCACCTGATGAGGAGTATATTGGTGAGATTTTGGAGCCATCCTGGACTGAAAATCCTGTTATAATGGATGCATTCGAGTGTTTCAAAGACAGTTTAAAAGAGCTAGAAAGAATTATCAATGAGAGGAATGCCGATAAGAGCCTGAGAAACAGAGTTGGAGCAGGGGTTGTACCATATGAGCTTCTGAAACCATTCTCAAAACCTGGGGTCACAGGAATGGGAGTCCCTAATAGCATCTCCATCTAA

Protein Analysis

640

Amino Acids

73.15

Weight (kDa)

5.74

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipoxygenase PF00305 2 - 197 7.7e-65 Lipoxygenase
Lipoxygenase PF00305 196 - 622 4.9e-222 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1736
AatII GACGTC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 639
AccB7I CCANNNNNTGG 1 cut(s) 761
AccBSI CCGCTC 1 cut(s) 346
AccI GTMKAC 1 cut(s) 992
AccII CGCG 2 cut(s) 172, 386
AciI CCGC 4 cut(s) 126, 170, 344, 1041
AclWI GGATC 4 cut(s) 877, 1169, 1182, 1547
AcoI YGGCCR 3 cut(s) 752, 1182, 1459
AcsI RAATTY 4 cut(s) 12, 57, 509, 533
AcuI CTGAAG 2 cut(s) 216, 1220
AcyI GRCGYC 1 cut(s) 166
AdeI CACNNNGTG 1 cut(s) 907
AfaI GTAC 4 cut(s) 1076, 1490, 1602, 1845
AfiI CCNNNNNNNGG 4 cut(s) 122, 334, 761, 802
AgsI TTSAA 9 cut(s) 265, 352, 668, 743, 1214, 1316, 1334, 1631, 1759
AhlI ACTAGT 1 cut(s) 209
AjnI CCWGG 4 cut(s) 120, 1066, 1715, 1876
AleI CACNNNNGTG 1 cut(s) 212
AloI GAACNNNNNNTCC 2 cut(s) 151, 183
Alw21I GWGCWC 1 cut(s) 856
Alw26I GTCTC 1 cut(s) 476
AlwI GGATC 4 cut(s) 877, 1169, 1182, 1547
Ama87I CYCGRG 1 cut(s) 1017
AoxI GGCC 7 cut(s) 588, 728, 752, 1182, 1363, 1394, 1459
ApeKI GCWGC 7 cut(s) 7, 153, 289, 929, 1097, 1189, 1469
ApoI RAATTY 4 cut(s) 12, 57, 509, 533
ArsI GACNNNNNNTTYG 2 cut(s) 1208, 1240
AseI ATTAAT 1 cut(s) 1032
Asp700I GAANNNNTTC 1 cut(s) 1865
AspA2I CCTAGG 1 cut(s) 146
AspLEI GCGC 3 cut(s) 153, 174, 1119
AspS9I GGNCC 2 cut(s) 184, 672
AsuHPI GGTGA 5 cut(s) 776, 1056, 1282, 1668, 1709
AvaI CYCGRG 1 cut(s) 1017
AvaII GGWCC 2 cut(s) 184, 672
AvrII CCTAGG 1 cut(s) 146
BalI TGGCCA 1 cut(s) 1461
BamHI GGATCC 1 cut(s) 1174
BbsI GAAGAC 3 cut(s) 781, 1221, 1377
Bbv12I GWGCWC 1 cut(s) 856
BbvCI CCTCAGC 1 cut(s) 306
BbvI GCAGC 6 cut(s) 140, 276, 941, 1084, 1201, 1481
BccI CCATC 5 cut(s) 963, 968, 1564, 1639, 1720
BceAI ACGGC 1 cut(s) 1197
BciT130I CCWGG 4 cut(s) 122, 1068, 1717, 1878
BciVI GTATCC 1 cut(s) 1496
BcoDI GTCTC 1 cut(s) 476
BcuI ACTAGT 1 cut(s) 209
BfmI CTRYAG 2 cut(s) 154, 964
BfoI RGCGCY 2 cut(s) 154, 1120
BfuAI ACCTGC 1 cut(s) 639
BfuI GTATCC 1 cut(s) 1496
BglI GCCNNNNNGGC 1 cut(s) 1393
BglII AGATCT 2 cut(s) 466, 1144
BisI GCNGC 8 cut(s) 8, 127, 154, 290, 930, 1098, 1190, 1470
BlnI CCTAGG 1 cut(s) 146
BlsI GCNGC 8 cut(s) 9, 128, 155, 291, 931, 1099, 1191, 1471
BmcAI AGTACT 2 cut(s) 1076, 1602
Bme1390I CCNGG 4 cut(s) 122, 1068, 1717, 1878
Bme18I GGWCC 2 cut(s) 184, 672
BmeT110I CYCGRG 1 cut(s) 1017
BmgT120I GGNCC 2 cut(s) 184, 672
BmiI GGNNCC 4 cut(s) 186, 673, 1176, 1710
BmrFI CCNGG 4 cut(s) 122, 1068, 1717, 1878
BmsI GCATC 4 cut(s) 390, 796, 1243, 1732
BpiI GAAGAC 3 cut(s) 781, 1221, 1377
BpmI CTGGAG 1 cut(s) 471
Bpu10I CCTNAGC 1 cut(s) 306
BsaHI GRCGYC 1 cut(s) 166
BsaJI CCNNGG 6 cut(s) 121, 146, 431, 591, 1388, 1877
BsaWI WCCGGW 1 cut(s) 327
BsaXI ACNNNNNCTCC 2 cut(s) 1824, 1854
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 334, 761, 802
Bse1I ACTGG 4 cut(s) 116, 766, 817, 893
Bse3DI GCAATG 2 cut(s) 296, 498
BseBI CCWGG 4 cut(s) 122, 1068, 1717, 1878
BseDI CCNNGG 6 cut(s) 121, 146, 431, 591, 1388, 1877
BseGI GGATG 8 cut(s) 40, 792, 811, 955, 1258, 1556, 1712, 1747
BseLI CCNNNNNNNGG 4 cut(s) 122, 334, 761, 802
BseMI GCAATG 2 cut(s) 296, 498
BseMII CTCAG 4 cut(s) 320, 702, 716, 1808
BseNI ACTGG 4 cut(s) 116, 766, 817, 893
BseRI GAGGAG 3 cut(s) 260, 1340, 1700
BseXI GCAGC 6 cut(s) 140, 276, 941, 1084, 1201, 1481
BseYI CCCAGC 1 cut(s) 801
BsgI GTGCAG 1 cut(s) 275
Bsh1236I CGCG 2 cut(s) 172, 386
BshFI GGCC 7 cut(s) 590, 730, 754, 1184, 1365, 1396, 1461
BsiHKAI GWGCWC 1 cut(s) 856
BsiHKCI CYCGRG 1 cut(s) 1017
BsiSI CCGG 1 cut(s) 328
BslFI GGGAC 2 cut(s) 685, 1883
BslI CCNNNNNNNGG 4 cut(s) 122, 334, 761, 802
BsmAI GTCTC 1 cut(s) 476
BsmFI GGGAC 2 cut(s) 685, 1883
BsmI GAATGC 2 cut(s) 1745, 1807
BsnI GGCC 7 cut(s) 590, 730, 754, 1184, 1365, 1396, 1461
BsoBI CYCGRG 1 cut(s) 1017
Bsp1286I GDGCHC 1 cut(s) 856
Bsp143I GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
Bsp19I CCATGG 1 cut(s) 1388
BspACI CCGC 4 cut(s) 126, 170, 344, 1041
BspANI GGCC 7 cut(s) 590, 730, 754, 1184, 1365, 1396, 1461
BspCNI CTCAG 4 cut(s) 319, 703, 717, 1809
BspFNI CGCG 2 cut(s) 172, 386
BspHI TCATGA 2 cut(s) 625, 856
BspLI GGNNCC 4 cut(s) 186, 673, 1176, 1710
BspMAI CTGCAG 1 cut(s) 158
BspMI ACCTGC 1 cut(s) 639
BspPI GGATC 4 cut(s) 877, 1169, 1182, 1547
BspQI GCTCTTC 1 cut(s) 353
BsrBI CCGCTC 1 cut(s) 346
BsrDI GCAATG 2 cut(s) 296, 498
BsrI ACTGG 4 cut(s) 116, 766, 817, 893
BssECI CCNNGG 6 cut(s) 121, 146, 431, 591, 1388, 1877
BssMI GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
BssNAI GTATAC 1 cut(s) 993
BssNI GRCGYC 1 cut(s) 166
BssT1I CCWWGG 4 cut(s) 146, 431, 591, 1388
Bst1107I GTATAC 1 cut(s) 993
Bst2UI CCWGG 4 cut(s) 122, 1068, 1717, 1878
Bst4CI ACNGT 6 cut(s) 503, 905, 1238, 1600, 1642, 1766
Bst6I CTCTTC 1 cut(s) 353
BstACI GRCGYC 1 cut(s) 166
BstAPI GCANNNNNTGC 1 cut(s) 298
BstC8I GCNNGC 4 cut(s) 294, 834, 1039, 1140
BstDEI CTNAG 6 cut(s) 306, 416, 711, 725, 1088, 1817
BstDSI CCRYGG 1 cut(s) 1388
BstF5I GGATG 8 cut(s) 40, 792, 811, 955, 1258, 1556, 1712, 1747
BstFNI CGCG 2 cut(s) 172, 386
BstH2I RGCGCY 2 cut(s) 154, 1120
BstHHI GCGC 3 cut(s) 153, 174, 1119
BstKTI GATC 6 cut(s) 85, 469, 885, 1147, 1177, 1555
BstMAI GTCTC 1 cut(s) 476
BstMBI GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
BstMWI GCNNNNNNNGC 6 cut(s) 16, 298, 307, 829, 1139, 1393
BstNI CCWGG 4 cut(s) 122, 1068, 1717, 1878
BstNSI RCATGY 1 cut(s) 1543
BstSCI CCNGG 4 cut(s) 120, 1066, 1715, 1876
BstSFI CTRYAG 2 cut(s) 154, 964
BstUI CGCG 2 cut(s) 172, 386
BstV1I GCAGC 6 cut(s) 140, 276, 941, 1084, 1201, 1481
BstV2I GAAGAC 3 cut(s) 781, 1221, 1377
BstX2I RGATCY 4 cut(s) 466, 1144, 1174, 1552
BstYI RGATCY 4 cut(s) 466, 1144, 1174, 1552
BstZ17I GTATAC 1 cut(s) 993
BsuI GTATCC 1 cut(s) 1496
BsuRI GGCC 7 cut(s) 590, 730, 754, 1184, 1365, 1396, 1461
BtgI CCRYGG 1 cut(s) 1388
BtgZI GCGATG 1 cut(s) 367
BtsCI GGATG 8 cut(s) 40, 792, 811, 955, 1258, 1556, 1712, 1747
BtsIMutI CAGTG 6 cut(s) 174, 457, 810, 886, 901, 1647
BveI ACCTGC 1 cut(s) 639
Cac8I GCNNGC 4 cut(s) 294, 834, 1039, 1140
CciI TCATGA 2 cut(s) 625, 856
CfoI GCGC 3 cut(s) 153, 174, 1119
Cfr13I GGNCC 2 cut(s) 184, 672
CseI GACGC 1 cut(s) 1310
Csp6I GTAC 4 cut(s) 1075, 1489, 1601, 1844
CspCI CAANNNNNGTGG 2 cut(s) 1322, 1357
CviQI GTAC 4 cut(s) 1075, 1489, 1601, 1844
DdeI CTNAG 6 cut(s) 306, 416, 711, 725, 1088, 1817
DpnI GATC 6 cut(s) 84, 468, 884, 1146, 1176, 1554
DpnII GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
DraI TTTAAA 1 cut(s) 1770
DraIII CACNNNGTG 1 cut(s) 907
EaeI YGGCCR 3 cut(s) 752, 1182, 1459
Eam1104I CTCTTC 1 cut(s) 353
EarI CTCTTC 1 cut(s) 353
EciI GGCGGA 1 cut(s) 1056
Eco130I CCWWGG 4 cut(s) 146, 431, 591, 1388
Eco147I AGGCCT 2 cut(s) 590, 730
Eco47I GGWCC 2 cut(s) 184, 672
Eco57I CTGAAG 2 cut(s) 216, 1220
Eco88I CYCGRG 1 cut(s) 1017
EcoO109I RGGNCCY 1 cut(s) 184
EcoRII CCWGG 4 cut(s) 120, 1066, 1715, 1876
EcoT14I CCWWGG 4 cut(s) 146, 431, 591, 1388
EcoT22I ATGCAT 1 cut(s) 1747
ErhI CCWWGG 4 cut(s) 146, 431, 591, 1388
FalI AAGNNNNNCTT 6 cut(s) 306, 338, 593, 625, 773, 805
FaqI GGGAC 2 cut(s) 685, 1883
FauNDI CATATG 2 cut(s) 1495, 1849
FblI GTMKAC 1 cut(s) 992
Fnu4HI GCNGC 8 cut(s) 8, 127, 154, 290, 930, 1098, 1190, 1470
FokI GGATG 8 cut(s) 47, 779, 818, 942, 1265, 1543, 1699, 1754
Fsp4HI GCNGC 8 cut(s) 8, 127, 154, 290, 930, 1098, 1190, 1470
GlaI GCGC 3 cut(s) 152, 173, 1118
GluI GCNGC 8 cut(s) 8, 127, 154, 290, 930, 1098, 1190, 1470
GsaI CCCAGC 1 cut(s) 805
GsuI CTGGAG 1 cut(s) 471
HaeII RGCGCY 2 cut(s) 154, 1120
HaeIII GGCC 7 cut(s) 590, 730, 754, 1184, 1365, 1396, 1461
HapII CCGG 1 cut(s) 328
HgaI GACGC 1 cut(s) 1310
HhaI GCGC 3 cut(s) 153, 174, 1119
Hin1I GRCGYC 1 cut(s) 166
Hin6I GCGC 3 cut(s) 151, 172, 1117
HinP1I GCGC 3 cut(s) 151, 172, 1117
HindIII AAGCTT 1 cut(s) 1131
HinfI GANTC 7 cut(s) 362, 484, 860, 898, 1044, 1627, 1896
HpaII CCGG 1 cut(s) 328
HphI GGTGA 5 cut(s) 776, 1056, 1282, 1668, 1709
Hpy166II GTNNAC 5 cut(s) 649, 993, 1344, 1477, 1491
Hpy188III TCNNGA 4 cut(s) 95, 626, 857, 1019
Hpy8I GTNNAC 5 cut(s) 649, 993, 1344, 1477, 1491
Hpy99I CGWCG 1 cut(s) 1238
HpyAV CCTTC 3 cut(s) 371, 662, 1149
HpyCH4III ACNGT 6 cut(s) 503, 905, 1238, 1600, 1642, 1766
HpyCH4IV ACGT 2 cut(s) 166, 677
HpyCH4V TGCA 7 cut(s) 156, 292, 929, 1037, 1229, 1469, 1745
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 298, 307, 829, 1139, 1393
HpyF3I CTNAG 6 cut(s) 306, 416, 711, 725, 1088, 1817
HpySE526I ACGT 2 cut(s) 166, 677
Hsp92I GRCGYC 1 cut(s) 166
HspAI GCGC 3 cut(s) 151, 172, 1117
Kzo9I GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
LguI GCTCTTC 1 cut(s) 353
LmnI GCTCC 6 cut(s) 4, 306, 1084, 1327, 1708, 1832
Lsp1109I GCAGC 6 cut(s) 140, 276, 941, 1084, 1201, 1481
LweI GCATC 4 cut(s) 390, 796, 1243, 1732
MaeII ACGT 2 cut(s) 166, 677
MaeIII GTNAC 4 cut(s) 764, 907, 1450, 1882
MalI GATC 6 cut(s) 84, 468, 884, 1146, 1176, 1554
MbiI CCGCTC 1 cut(s) 346
MboI GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
MboII GAAGA 7 cut(s) 209, 340, 542, 781, 1226, 1382, 1562
MfeI CAATTG 2 cut(s) 405, 1209
MflI RGATCY 4 cut(s) 466, 1144, 1174, 1552
MhlI GDGCHC 1 cut(s) 856
MlsI TGGCCA 1 cut(s) 1461
MluNI TGGCCA 1 cut(s) 1461
MlyI GAGTC 5 cut(s) 478, 854, 892, 1053, 1905
MmeI TCCRAC 2 cut(s) 1202, 1810
Mox20I TGGCCA 1 cut(s) 1461
Mph1103I ATGCAT 1 cut(s) 1747
MroXI GAANNNNTTC 1 cut(s) 1865
MscI TGGCCA 1 cut(s) 1461
MseI TTAA 7 cut(s) 372, 561, 585, 975, 1032, 1260, 1769
MslI CAYNNNNRTG 4 cut(s) 212, 849, 1750, 1889
Msp20I TGGCCA 1 cut(s) 1461
MspA1I CMGCKG 1 cut(s) 1472
MspI CCGG 1 cut(s) 328
MspR9I CCNGG 4 cut(s) 122, 1068, 1717, 1878
MunI CAATTG 2 cut(s) 405, 1209
Mva1269I GAATGC 2 cut(s) 1745, 1807
MvaI CCWGG 4 cut(s) 122, 1068, 1717, 1878
MvnI CGCG 2 cut(s) 172, 386
MwoI GCNNNNNNNGC 6 cut(s) 16, 298, 307, 829, 1139, 1393
NcoI CCATGG 1 cut(s) 1388
NdeI CATATG 2 cut(s) 1495, 1849
NdeII GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
NlaIV GGNNCC 4 cut(s) 186, 673, 1176, 1710
NmeAIII GCCGAG 2 cut(s) 520, 730
NmuCI GTSAC 4 cut(s) 764, 907, 1450, 1882
NsiI ATGCAT 1 cut(s) 1747
NspI RCATGY 1 cut(s) 1543
OliI CACNNNNGTG 1 cut(s) 212
PaeR7I CTCGAG 1 cut(s) 1017
PagI TCATGA 2 cut(s) 625, 856
PceI AGGCCT 2 cut(s) 590, 730
PciSI GCTCTTC 1 cut(s) 353
PctI GAATGC 2 cut(s) 1745, 1807
PdmI GAANNNNTTC 1 cut(s) 1865
PfeI GAWTC 2 cut(s) 362, 1627
PflMI CCANNNNNTGG 1 cut(s) 761
PfoI TCCNGGA 1 cut(s) 1715
PkrI GCNGC 8 cut(s) 9, 128, 155, 291, 931, 1099, 1191, 1471
PleI GAGTC 5 cut(s) 478, 854, 892, 1052, 1904
PpsI GAGTC 5 cut(s) 478, 854, 892, 1052, 1904
PpuMI RGGWCCY 1 cut(s) 184
PshBI ATTAAT 1 cut(s) 1032
PsiI TTATAA 1 cut(s) 1736
Psp5II RGGWCCY 1 cut(s) 184
Psp6I CCWGG 4 cut(s) 120, 1066, 1715, 1876
PspFI CCCAGC 1 cut(s) 801
PspGI CCWGG 4 cut(s) 120, 1066, 1715, 1876
PspN4I GGNNCC 4 cut(s) 186, 673, 1176, 1710
PspPI GGNCC 2 cut(s) 184, 672
PspPPI RGGWCCY 1 cut(s) 184
PstI CTGCAG 1 cut(s) 158
PsuI RGATCY 4 cut(s) 466, 1144, 1174, 1552
PvuII CAGCTG 1 cut(s) 1472
RsaI GTAC 4 cut(s) 1076, 1490, 1602, 1845
RsaNI GTAC 4 cut(s) 1075, 1489, 1601, 1844
RseI CAYNNNNRTG 4 cut(s) 212, 849, 1750, 1889
SapI GCTCTTC 1 cut(s) 353
SaqAI TTAA 7 cut(s) 372, 561, 585, 975, 1032, 1260, 1769
SatI GCNGC 8 cut(s) 8, 127, 154, 290, 930, 1098, 1190, 1470
Sau3AI GATC 6 cut(s) 82, 466, 882, 1144, 1174, 1552
Sau96I GGNCC 2 cut(s) 184, 672
ScaI AGTACT 2 cut(s) 1076, 1602
SchI GAGTC 5 cut(s) 478, 854, 892, 1053, 1905
ScrFI CCNGG 4 cut(s) 122, 1068, 1717, 1878
SduI GDGCHC 1 cut(s) 856
SfaNI GCATC 4 cut(s) 390, 796, 1243, 1732
SfcI CTRYAG 2 cut(s) 154, 964
Sfr274I CTCGAG 1 cut(s) 1017
SinI GGWCC 2 cut(s) 184, 672
SlaI CTCGAG 1 cut(s) 1017
SmiMI CAYNNNNRTG 4 cut(s) 212, 849, 1750, 1889
SmlI CTYRAG 1 cut(s) 1017
SmoI CTYRAG 1 cut(s) 1017
SpeI ACTAGT 1 cut(s) 209
SseBI AGGCCT 2 cut(s) 590, 730
SsiI CCGC 4 cut(s) 126, 170, 344, 1041
StuI AGGCCT 2 cut(s) 590, 730
StyD4I CCNGG 4 cut(s) 120, 1066, 1715, 1876
StyI CCWWGG 4 cut(s) 146, 431, 591, 1388
TaaI ACNGT 6 cut(s) 503, 905, 1238, 1600, 1642, 1766
TaiI ACGT 2 cut(s) 169, 680
TaqI TCGA 5 cut(s) 1018, 1531, 1572, 1667, 1749
TatI WGTACW 3 cut(s) 1074, 1488, 1600
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 2 cut(s) 362, 1627
Tru1I TTAA 7 cut(s) 372, 561, 585, 975, 1032, 1260, 1769
Tru9I TTAA 7 cut(s) 372, 561, 585, 975, 1032, 1260, 1769
TscAI CASTG 6 cut(s) 181, 457, 817, 893, 908, 1647
TseFI GTSAC 4 cut(s) 764, 907, 1450, 1882
TseI GCWGC 7 cut(s) 7, 153, 289, 929, 1097, 1189, 1469
Tsp45I GTSAC 4 cut(s) 764, 907, 1450, 1882
TspDTI ATGAA 6 cut(s) 51, 246, 543, 781, 1383, 1415
TspGWI ACGGA 1 cut(s) 282
TspRI CASTG 6 cut(s) 181, 457, 817, 893, 908, 1647
Van91I CCANNNNNTGG 1 cut(s) 761
VpaK11BI GGWCC 2 cut(s) 184, 672
VspI ATTAAT 1 cut(s) 1032
XapI RAATTY 4 cut(s) 12, 57, 509, 533
XceI RCATGY 1 cut(s) 1543
XhoI CTCGAG 1 cut(s) 1017
XmaJI CCTAGG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 992
XmnI GAANNNNTTC 1 cut(s) 1865
ZraI GACGTC 1 cut(s) 167
ZrmI AGTACT 2 cut(s) 1076, 1602
Zsp2I ATGCAT 1 cut(s) 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.