Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004992.1

Orthogroup ID

OG0000211

Physical Location & Seq

Genomic Coordinates Forward (+)

23333 .. 27871

Gene Structure 4539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004992.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atgatgatgaagcctcagctgcaaaaaccactctcctcctctgctagatctagtcctctcttaccactaaaacccggcagctccgccattctgagcagcccttccttcgtcaacatccttcctgcaagcggccgtacaaagcaccccttgagcaaaaaatataattgcatccgtgcctccagtgaagtaaaggtagcgactgcaaccaacacaggggtggataaaaatgatactgcagttacagtgaaggcagtggttacggtgcaagaaacagcggcaaacatcctctccacccttagcttgactgcaccgctcgacaccctcaccgatttcgccggcaaaacctttcttctcgagctcgtcagcgctcaacttgaccccaggactgggttggagaatgaaacaataaaggggtatgcacacaaagtgaaccaaaaagagacgatcgtcacatacgagagtgtgctgacgatcccagcggggttcggagatattggagcggttcaggttgagaatgagcaccacaaggaagcttacatcaagagtatcgagatcaccggcttcccaaatggcacctctgttagtgttccatggactgggttggagaaggaaacaataaaggggtatgcacacaaagtgaaccaaaaagagacgatcgtcacgtacgagagtgtgctgacgatcccagcggggttcggggatatcggagcggttcaggttgagaatgagcaccacaaggaggcttacatcaagagtatcgagatcaccggcttcccaaatggcacctctgttagtgttccatgtaattcatggactcattccaagtatgacaataagcagaagagaatctttttcaccaacaagtcttacttaccatcagagacaccaagtgggatcaagaggctaagagaagaggagctgcaacttctgcaaggaaatggcgagggtgaaaggaaagcatctgaaaggatttacgattatgatacatacaatgatcttggagacccagatagcaaagacgagttggctaggcctgtccttggtggcaaagaccacccgtaccctaggcgctgcagaactggacgaccacgcactaaaaaggatccattatcagaggaaagaagcagtagcgtgtatgtaccaagagatgaagcgtttgcagagttgaaacagctcacattctctgcaaagaccctgaaatctgtgctgcacgcattgcttcctcagcttgagatgacacttgttgatccagagctaggatttccctacttcacagccatagattcattgttcaatgaaggagtcacattgcctaagccaacagctagtggcttttttcagtcaatcatcccaaggctagtcaaggcaattagcgatggacaagatgatctcttgctctttgagacccctgaaatacttgatcgtgataaattttcttggttcagagatgaagaattttctcgacaaactctagctggtcttaatccatatagcatagagctagttacggaatggccattgaaaagtaaacttgaccccgagatttatggcccagctgaatcattgatcacaacagaagtggtggagaaggagatcaaaggctttatgactgtcaatgaggccttaaaaagaaagaagctctttattttggattatcatgatctgttcatgccttatgtgaacaaagtgagagaggttgaaggaaccacactgtatggttctcggacacttttcttcctcaatgagaatggcacactgaggcctgttgccattgaactcactcggccacccattggggacaagccccaatggaaggaagtgtttaccccaacatgggatgccactggttgctggctttggaggcttgcgaaagcccacgtttgtgcccatgattcaggctatcatcagcttgtcatccactggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009694 GO:0009695 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009941 GO:0009987 GO:0010033 GO:0010597 GO:0010817 GO:0014070 GO:0016020 GO:0016053 GO:0016165 GO:0016166 GO:0016491 GO:0016627 GO:0016701 GO:0016702 GO:0019372 GO:0019752 GO:0030258 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032787 GO:0034357 GO:0034440 GO:0042221 GO:0042445 GO:0042446 GO:0042493 GO:0042651 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046677 GO:0050896 GO:0051213 GO:0051704 GO:0051707 GO:0055035 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080027 GO:1901568 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

641

Amino Acids

71.64

Weight (kDa)

6.16

Isoelectric Point (pI)

37.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45140 AT3G45140
fragaria_vesca	FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica	MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica	Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis	pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis	RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata	RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora	Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii	Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa	Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha	Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana	Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	572, 782
AccB7I	CCANNNNNTGG	2 cut(s)	596, 1793
AccBSI	CCGCTC	3 cut(s)	313, 500, 710
AciI	CCGC	8 cut(s)	84, 129, 275, 311, 479, 500, 689, 710
AclWI	GGATC	6 cut(s)	466, 676, 902, 1097, 1110, 1241
AcoI	YGGCCR	3 cut(s)	130, 1514, 1784
AcsI	RAATTY	2 cut(s)	1430, 1454
AdeI	CACNNNGTG	3 cut(s)	427, 637, 890
AfaI	GTAC	4 cut(s)	136, 665, 1061, 1140
AfeI	AGCGCT	1 cut(s)	367
AgsI	TTSAA	5 cut(s)	1168, 1294, 1522, 1700, 1775
AjnI	CCWGG	1 cut(s)	380
AleI	CACNNNNGTG	2 cut(s)	215, 1881
Alw21I	GWGCWC	3 cut(s)	360, 522, 732
Alw26I	GTCTC	5 cut(s)	434, 644, 875, 996, 1397
AlwI	GGATC	6 cut(s)	466, 676, 902, 1097, 1110, 1241
Ama87I	CYCGRG	2 cut(s)	353, 1538
Aor51HI	AGCGCT	1 cut(s)	367
AoxI	GGCC	7 cut(s)	130, 1031, 1514, 1549, 1620, 1760, 1784
ApeKI	GCWGC	6 cut(s)	19, 78, 96, 919, 1071, 1207
ApoI	RAATTY	2 cut(s)	1430, 1454
AspA2I	CCTAGG	1 cut(s)	1064
AspLEI	GCGC	2 cut(s)	368, 1071
AspS9I	GGNCC	1 cut(s)	1550
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	5 cut(s)	316, 547, 757, 847, 959
AvaI	CYCGRG	2 cut(s)	353, 1538
AvrII	CCTAGG	1 cut(s)	1064
BaeGI	GKGCMC	1 cut(s)	1888
BaeI	ACNNNNGTAYC	2 cut(s)	222, 255
BalI	TGGCCA	1 cut(s)	1516
BamHI	GGATCC	1 cut(s)	1102
BanI	GGYRCC	2 cut(s)	572, 782
BanII	GRGCYC	1 cut(s)	360
Bbv12I	GWGCWC	3 cut(s)	360, 522, 732
BbvCI	CCTCAGC	2 cut(s)	15, 1224
BbvI	GCAGC	6 cut(s)	6, 90, 108, 906, 1058, 1194
BccI	CCATC	2 cut(s)	883, 1370
BceAI	ACGGC	1 cut(s)	117
BciT130I	CCWGG	1 cut(s)	382
BclI	TGATCA	1 cut(s)	1566
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	5 cut(s)	434, 644, 875, 996, 1397
BfaI	CTAG	9 cut(s)	45, 51, 1029, 1065, 1256, 1326, 1358, 1472, 1502
BfmI	CTRYAG	2 cut(s)	234, 1072
BfoI	RGCGCY	2 cut(s)	369, 1072
BglII	AGATCT	1 cut(s)	47
BisI	GCNGC	8 cut(s)	20, 79, 97, 130, 276, 920, 1072, 1208
BlnI	CCTAGG	1 cut(s)	1064
BlsI	GCNGC	8 cut(s)	21, 80, 98, 131, 277, 921, 1073, 1209
Bme1390I	CCNGG	2 cut(s)	75, 382
BmeT110I	CYCGRG	2 cut(s)	353, 1538
BmgT120I	GGNCC	1 cut(s)	1550
BmiI	GGNNCC	4 cut(s)	574, 784, 1104, 1705
BmrFI	CCNGG	2 cut(s)	75, 382
BmrI	ACTGGG	2 cut(s)	396, 606
BmsI	GCATC	3 cut(s)	177, 968, 1828
BmuI	ACTGGG	2 cut(s)	396, 606
BoxI	GACNNNNGTC	2 cut(s)	446, 656
BpmI	CTGGAG	1 cut(s)	163
Bpu10I	CCTNAGC	4 cut(s)	15, 296, 1224, 1314
BpuEI	CTTGAG	2 cut(s)	169, 1250
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	663
BsaI	GGTCTC	2 cut(s)	996, 1397
BsaJI	CCNNGG	5 cut(s)	380, 590, 1039, 1064, 1352
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bse118I	RCCGGY	3 cut(s)	335, 557, 767
Bse1I	ACTGG	6 cut(s)	180, 391, 601, 1084, 1849, 1925
Bse3DI	GCAATG	2 cut(s)	1214, 1307
BseBI	CCWGG	1 cut(s)	382
BseDI	CCNNGG	5 cut(s)	380, 590, 1039, 1064, 1352
BseGI	GGATG	6 cut(s)	114, 168, 282, 1347, 1843, 1914
BseMI	GCAATG	2 cut(s)	1214, 1307
BseMII	CTCAG	4 cut(s)	29, 83, 1238, 1748
BseNI	ACTGG	6 cut(s)	180, 391, 601, 1084, 1849, 1925
BseRI	GAGGAG	3 cut(s)	25, 28, 929
BseSI	GKGCMC	1 cut(s)	1888
BseX3I	CGGCCG	1 cut(s)	130
BseXI	GCAGC	6 cut(s)	6, 90, 108, 906, 1058, 1194
BseYI	CCCAGC	3 cut(s)	475, 685, 1552
BsgI	GTGCAG	2 cut(s)	291, 1193
Bsh1285I	CGRYCG	3 cut(s)	133, 447, 657
BshFI	GGCC	7 cut(s)	132, 1033, 1516, 1551, 1622, 1762, 1786
BshNI	GGYRCC	2 cut(s)	572, 782
BsiEI	CGRYCG	3 cut(s)	133, 447, 657
BsiHKAI	GWGCWC	3 cut(s)	360, 522, 732
BsiHKCI	CYCGRG	2 cut(s)	353, 1538
BsiSI	CCGG	4 cut(s)	75, 336, 558, 768
BsiWI	CGTACG	1 cut(s)	663
BslFI	GGGAC	1 cut(s)	1811
BsmAI	GTCTC	5 cut(s)	434, 644, 875, 996, 1397
BsmBI	CGTCTC	2 cut(s)	434, 644
BsmFI	GGGAC	1 cut(s)	1811
BsnI	GGCC	7 cut(s)	132, 1033, 1516, 1551, 1622, 1762, 1786
Bso31I	GGTCTC	2 cut(s)	996, 1397
BsoBI	CYCGRG	2 cut(s)	353, 1538
Bsp1286I	GDGCHC	4 cut(s)	360, 522, 732, 1888
Bsp19I	CCATGG	1 cut(s)	590
BspACI	CCGC	8 cut(s)	84, 129, 275, 311, 479, 500, 689, 710
BspANI	GGCC	7 cut(s)	132, 1033, 1516, 1551, 1622, 1762, 1786
BspCNI	CTCAG	4 cut(s)	28, 84, 1237, 1749
BspHI	TCATGA	1 cut(s)	1657
BspLI	GGNNCC	4 cut(s)	574, 784, 1104, 1705
BspMAI	CTGCAG	2 cut(s)	238, 1076
BspPI	GGATC	6 cut(s)	466, 676, 902, 1097, 1110, 1241
BspT107I	GGYRCC	2 cut(s)	572, 782
BspTNI	GGTCTC	2 cut(s)	996, 1397
BsrBI	CCGCTC	3 cut(s)	313, 500, 710
BsrDI	GCAATG	2 cut(s)	1214, 1307
BsrFI	RCCGGY	3 cut(s)	335, 557, 767
BsrI	ACTGG	6 cut(s)	180, 391, 601, 1084, 1849, 1925
BssAI	RCCGGY	3 cut(s)	335, 557, 767
BssECI	CCNNGG	5 cut(s)	380, 590, 1039, 1064, 1352
BssT1I	CCWWGG	4 cut(s)	590, 1039, 1064, 1352
Bst2UI	CCWGG	1 cut(s)	382
Bst4CI	ACNGT	4 cut(s)	244, 262, 1612, 1713
Bst6I	CTCTTC	2 cut(s)	836, 906
BstAPI	GCANNNNNTGC	2 cut(s)	928, 1216
BstBAI	YACGTR	1 cut(s)	663
BstC8I	GCNNGC	5 cut(s)	127, 337, 1212, 1853, 1866
BstDEI	CTNAG	7 cut(s)	15, 92, 296, 905, 1224, 1314, 1757
BstDSI	CCRYGG	1 cut(s)	590
BstF5I	GGATG	6 cut(s)	114, 168, 282, 1347, 1843, 1914
BstH2I	RGCGCY	2 cut(s)	369, 1072
BstHHI	GCGC	2 cut(s)	368, 1071
BstMAI	GTCTC	5 cut(s)	434, 644, 875, 996, 1397
BstMCI	CGRYCG	3 cut(s)	133, 447, 657
BstMWI	GCNNNNNNNGC	5 cut(s)	19, 928, 1216, 1225, 1861
BstNI	CCWGG	1 cut(s)	382
BstPAI	GACNNNNGTC	2 cut(s)	446, 656
BstSCI	CCNGG	2 cut(s)	73, 380
BstSFI	CTRYAG	2 cut(s)	234, 1072
BstSLI	GKGCMC	1 cut(s)	1888
BstV1I	GCAGC	6 cut(s)	6, 90, 108, 906, 1058, 1194
BstX2I	RGATCY	2 cut(s)	47, 1102
BstYI	RGATCY	2 cut(s)	47, 1102
BstZI	CGGCCG	1 cut(s)	130
BsuRI	GGCC	7 cut(s)	132, 1033, 1516, 1551, 1622, 1762, 1786
BtgI	CCRYGG	1 cut(s)	590
BtgZI	GCGATG	1 cut(s)	1389
BtsCI	GGATG	6 cut(s)	114, 168, 282, 1347, 1843, 1914
BtsI	GCAGTG	1 cut(s)	258
BtsIMutI	CAGTG	7 cut(s)	187, 249, 258, 1709, 1754, 1842, 1918
Cac8I	GCNNGC	5 cut(s)	127, 337, 1212, 1853, 1866
CciI	TCATGA	1 cut(s)	1657
CfoI	GCGC	2 cut(s)	368, 1071
Cfr10I	RCCGGY	3 cut(s)	335, 557, 767
Cfr13I	GGNCC	1 cut(s)	1550
Csp6I	GTAC	4 cut(s)	135, 664, 1060, 1139
CspCI	CAANNNNNGTGG	2 cut(s)	1560, 1595
CviAII	CATG	7 cut(s)	591, 801, 810, 1658, 1669, 1833, 1889
CviQI	GTAC	4 cut(s)	135, 664, 1060, 1139
DdeI	CTNAG	7 cut(s)	15, 92, 296, 905, 1224, 1314, 1757
DraIII	CACNNNGTG	3 cut(s)	427, 637, 890
EaeI	YGGCCR	3 cut(s)	130, 1514, 1784
EagI	CGGCCG	1 cut(s)	130
Eam1104I	CTCTTC	2 cut(s)	836, 906
EarI	CTCTTC	2 cut(s)	836, 906
EciI	GGCGGA	1 cut(s)	73
Ecl136II	GAGCTC	1 cut(s)	358
EclXI	CGGCCG	1 cut(s)	130
Eco130I	CCWWGG	4 cut(s)	590, 1039, 1064, 1352
Eco147I	AGGCCT	3 cut(s)	1033, 1622, 1762
Eco24I	GRGCYC	1 cut(s)	360
Eco31I	GGTCTC	2 cut(s)	996, 1397
Eco32I	GATATC	1 cut(s)	703
Eco47III	AGCGCT	1 cut(s)	367
Eco52I	CGGCCG	1 cut(s)	130
Eco53kI	GAGCTC	1 cut(s)	358
Eco88I	CYCGRG	2 cut(s)	353, 1538
EcoICRI	GAGCTC	1 cut(s)	358
EcoRII	CCWGG	1 cut(s)	380
EcoRV	GATATC	1 cut(s)	703
EcoT14I	CCWWGG	4 cut(s)	590, 1039, 1064, 1352
EcoT38I	GRGCYC	1 cut(s)	360
ErhI	CCWWGG	4 cut(s)	590, 1039, 1064, 1352
Esp3I	CGTCTC	2 cut(s)	434, 644
FaeI	CATG	7 cut(s)	594, 804, 813, 1661, 1672, 1836, 1892
FalI	AAGNNNNNCTT	8 cut(s)	131, 163, 833, 865, 854, 886, 1625, 1657
FaqI	GGGAC	1 cut(s)	1811
FatI	CATG	7 cut(s)	590, 800, 809, 1657, 1668, 1832, 1888
FauI	CCCGC	2 cut(s)	472, 682
FbaI	TGATCA	1 cut(s)	1566
Fnu4HI	GCNGC	8 cut(s)	20, 79, 97, 130, 276, 920, 1072, 1208
FokI	GGATG	6 cut(s)	101, 155, 269, 1334, 1850, 1901
FriOI	GRGCYC	1 cut(s)	360
Fsp4HI	GCNGC	8 cut(s)	20, 79, 97, 130, 276, 920, 1072, 1208
FspBI	CTAG	9 cut(s)	45, 51, 1029, 1065, 1256, 1326, 1358, 1472, 1502
GlaI	GCGC	2 cut(s)	367, 1070
GluI	GCNGC	8 cut(s)	20, 79, 97, 130, 276, 920, 1072, 1208
GsaI	CCCAGC	3 cut(s)	479, 689, 1556
GsuI	CTGGAG	1 cut(s)	163
HaeII	RGCGCY	2 cut(s)	369, 1072
HaeIII	GGCC	7 cut(s)	132, 1033, 1516, 1551, 1622, 1762, 1786
HapII	CCGG	4 cut(s)	75, 336, 558, 768
HhaI	GCGC	2 cut(s)	368, 1071
Hin1II	CATG	7 cut(s)	594, 804, 813, 1661, 1672, 1836, 1892
Hin6I	GCGC	2 cut(s)	366, 1069
HinP1I	GCGC	2 cut(s)	366, 1069
HincII	GTYRAC	1 cut(s)	112
HindII	GTYRAC	1 cut(s)	112
HindIII	AAGCTT	1 cut(s)	531
HinfI	GANTC	6 cut(s)	814, 846, 1283, 1302, 1559, 1892
HpaII	CCGG	4 cut(s)	75, 336, 558, 768
HphI	GGTGA	5 cut(s)	316, 547, 757, 847, 959
Hpy166II	GTNNAC	6 cut(s)	112, 430, 640, 1529, 1681, 1824
Hpy188I	TCNGA	8 cut(s)	93, 488, 707, 880, 964, 1114, 1445, 1725
Hpy8I	GTNNAC	6 cut(s)	112, 430, 640, 1529, 1681, 1824
HpyAV	CCTTC	9 cut(s)	111, 115, 128, 241, 601, 1292, 1582, 1694, 1807
HpyCH4III	ACNGT	4 cut(s)	244, 262, 1612, 1713
HpyCH4IV	ACGT	2 cut(s)	662, 1878
HpyF10VI	GCNNNNNNNGC	5 cut(s)	19, 928, 1216, 1225, 1861
HpyF3I	CTNAG	7 cut(s)	15, 92, 296, 905, 1224, 1314, 1757
HpySE526I	ACGT	2 cut(s)	662, 1878
Hsp92II	CATG	7 cut(s)	594, 804, 813, 1661, 1672, 1836, 1892
HspAI	GCGC	2 cut(s)	366, 1069
KroI	GCCGGC	1 cut(s)	335
KroNI	GCCGGC	1 cut(s)	337
Ksp22I	TGATCA	1 cut(s)	1566
LmnI	GCTCC	4 cut(s)	86, 497, 707, 916
Lsp1109I	GCAGC	6 cut(s)	6, 90, 108, 906, 1058, 1194
LweI	GCATC	3 cut(s)	177, 968, 1828
MaeI	CTAG	9 cut(s)	45, 51, 1029, 1065, 1256, 1326, 1358, 1472, 1502
MaeII	ACGT	2 cut(s)	662, 1878
MaeIII	GTNAC	6 cut(s)	238, 256, 448, 658, 1303, 1504
MbiI	CCGCTC	3 cut(s)	313, 500, 710
MboII	GAAGA	5 cut(s)	341, 853, 923, 1463, 1726
MflI	RGATCY	2 cut(s)	47, 1102
MhlI	GDGCHC	4 cut(s)	360, 522, 732, 1888
MlsI	TGGCCA	1 cut(s)	1516
MluCI	AATT	5 cut(s)	163, 805, 1368, 1430, 1454
MluNI	TGGCCA	1 cut(s)	1516
MlyI	GAGTC	2 cut(s)	808, 1311
MmeI	TCCRAC	2 cut(s)	372, 582
Mox20I	TGGCCA	1 cut(s)	1516
MroNI	GCCGGC	1 cut(s)	335
MscI	TGGCCA	1 cut(s)	1516
MseI	TTAA	2 cut(s)	1482, 1625
MslI	CAYNNNNRTG	2 cut(s)	215, 1881
Msp20I	TGGCCA	1 cut(s)	1516
MspA1I	CMGCKG	5 cut(s)	19, 275, 479, 689, 1556
MspI	CCGG	4 cut(s)	75, 336, 558, 768
MspR9I	CCNGG	2 cut(s)	75, 382
MvaI	CCWGG	1 cut(s)	382
MwoI	GCNNNNNNNGC	5 cut(s)	19, 928, 1216, 1225, 1861
NaeI	GCCGGC	1 cut(s)	337
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	1 cut(s)	590
NgoMIV	GCCGGC	1 cut(s)	335
NlaIII	CATG	7 cut(s)	594, 804, 813, 1661, 1672, 1836, 1892
NlaIV	GGNNCC	4 cut(s)	574, 784, 1104, 1705
NmeAIII	GCCGAG	1 cut(s)	1762
NmuCI	GTSAC	3 cut(s)	448, 658, 1303
OliI	CACNNNNGTG	2 cut(s)	215, 1881
PaeR7I	CTCGAG	1 cut(s)	353
PagI	TCATGA	1 cut(s)	1657
PceI	AGGCCT	3 cut(s)	1033, 1622, 1762
PcsI	WCGNNNNNNNCGW	3 cut(s)	453, 659, 663
PdiI	GCCGGC	1 cut(s)	337
PfeI	GAWTC	4 cut(s)	846, 1283, 1559, 1892
Pfl23II	CGTACG	1 cut(s)	663
PflMI	CCANNNNNTGG	2 cut(s)	596, 1793
PkrI	GCNGC	8 cut(s)	21, 80, 98, 131, 277, 921, 1073, 1209
Ple19I	CGATCG	2 cut(s)	447, 657
PleI	GAGTC	2 cut(s)	808, 1310
PpsI	GAGTC	2 cut(s)	808, 1310
Ppu21I	YACGTR	1 cut(s)	663
PshAI	GACNNNNGTC	2 cut(s)	446, 656
Psp124BI	GAGCTC	1 cut(s)	360
Psp6I	CCWGG	1 cut(s)	380
PspFI	CCCAGC	3 cut(s)	475, 685, 1552
PspGI	CCWGG	1 cut(s)	380
PspLI	CGTACG	1 cut(s)	663
PspN4I	GGNNCC	4 cut(s)	574, 784, 1104, 1705
PspPI	GGNCC	1 cut(s)	1550
PstI	CTGCAG	2 cut(s)	238, 1076
PsuI	RGATCY	2 cut(s)	47, 1102
PvuI	CGATCG	2 cut(s)	447, 657
PvuII	CAGCTG	2 cut(s)	19, 1556
RsaI	GTAC	4 cut(s)	136, 665, 1061, 1140
RsaNI	GTAC	4 cut(s)	135, 664, 1060, 1139
RseI	CAYNNNNRTG	2 cut(s)	215, 1881
SacI	GAGCTC	1 cut(s)	360
SaqAI	TTAA	2 cut(s)	1482, 1625
SatI	GCNGC	8 cut(s)	20, 79, 97, 130, 276, 920, 1072, 1208
Sau96I	GGNCC	1 cut(s)	1550
SchI	GAGTC	2 cut(s)	808, 1311
ScrFI	CCNGG	2 cut(s)	75, 382
SduI	GDGCHC	4 cut(s)	360, 522, 732, 1888
SfaNI	GCATC	3 cut(s)	177, 968, 1828
SfcI	CTRYAG	2 cut(s)	234, 1072
Sfr274I	CTCGAG	1 cut(s)	353
SlaI	CTCGAG	1 cut(s)	353
SmiMI	CAYNNNNRTG	2 cut(s)	215, 1881
SmlI	CTYRAG	3 cut(s)	148, 353, 1229
SmoI	CTYRAG	3 cut(s)	148, 353, 1229
Sse9I	AATT	5 cut(s)	163, 805, 1368, 1430, 1454
SseBI	AGGCCT	3 cut(s)	1033, 1622, 1762
SsiI	CCGC	8 cut(s)	84, 129, 275, 311, 479, 500, 689, 710
SspMI	CTAG	9 cut(s)	45, 51, 1029, 1065, 1256, 1326, 1358, 1472, 1502
SstI	GAGCTC	1 cut(s)	360
StuI	AGGCCT	3 cut(s)	1033, 1622, 1762
StyD4I	CCNGG	2 cut(s)	73, 380
StyI	CCWWGG	4 cut(s)	590, 1039, 1064, 1352
TaaI	ACNGT	4 cut(s)	244, 262, 1612, 1713
TaiI	ACGT	2 cut(s)	665, 1881
TaqI	TCGA	5 cut(s)	315, 354, 549, 759, 1462
TasI	AATT	5 cut(s)	163, 805, 1368, 1430, 1454
TauI	GCSGC	2 cut(s)	132, 278
TfiI	GAWTC	4 cut(s)	846, 1283, 1559, 1892
Tru1I	TTAA	2 cut(s)	1482, 1625
Tru9I	TTAA	2 cut(s)	1482, 1625
TscAI	CASTG	7 cut(s)	187, 249, 258, 1716, 1761, 1849, 1925
TseFI	GTSAC	3 cut(s)	448, 658, 1303
TseI	GCWGC	6 cut(s)	19, 78, 96, 919, 1071, 1207
Tsp45I	GTSAC	3 cut(s)	448, 658, 1303
TspDTI	ATGAA	8 cut(s)	23, 414, 798, 1164, 1275, 1311, 1464, 1657
TspGWI	ACGGA	2 cut(s)	161, 1523
TspRI	CASTG	7 cut(s)	187, 249, 258, 1716, 1761, 1849, 1925
Van91I	CCANNNNNTGG	2 cut(s)	596, 1793
XapI	RAATTY	2 cut(s)	1430, 1454
XcmI	CCANNNNNNNNNTGG	3 cut(s)	214, 388, 807
XhoI	CTCGAG	1 cut(s)	353
XmaJI	CCTAGG	1 cut(s)	1064
XspI	CTAG	9 cut(s)	45, 51, 1029, 1065, 1256, 1326, 1358, 1472, 1502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.